mRNA_Ecto-sp8_S_contig923.30619.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig923.30619.1 vs. uniprot
Match: D7FIU2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU2_ECTSI) HSP 1 Score: 355 bits (912), Expect = 2.150e-117 Identity = 182/200 (91.00%), Postives = 184/200 (92.00%), Query Frame = 1
Query: 1 MSTTPATDRKPGGGFGKDLANVLFCGLLAQGVAYPLGLDAAAALAMGIQARSSPPCKCCDALILAWVPSALAQNETFYDFTGMLTFMAVTTFSTLGFLRRFFDGEMIAMFGEGSSLAMEHPVSIATAAPRHVVATALVLTWTTRLGTFLFARIRRDGHDSRFNGVRDRPLKFLVFWFVQGIWVFFTSLPMLVLHKVDPRG 600
MSTTPATDRKPGGGFGKDLANVLFCGLLAQGVAYPLGLDAAAALAMGIQ ILAWVPSALAQNETFYDFTGMLTFMAVTTFSTLGFL RFFDGEM AMFGEGSS AMEHP+SIATAAPRH+VATALVLTWTTRLGTFLFARIRRDGHDSRFNGVRDRPLKFLVFWFVQGIWVFFTSLPMLVLHKVDPRG
Sbjct: 1 MSTTPATDRKPGGGFGKDLANVLFCGLLAQGVAYPLGLDAAAALAMGIQ-------------ILAWVPSALAQNETFYDFTGMLTFMAVTTFSTLGFLLRFFDGEMAAMFGEGSSPAMEHPLSIATAAPRHLVATALVLTWTTRLGTFLFARIRRDGHDSRFNGVRDRPLKFLVFWFVQGIWVFFTSLPMLVLHKVDPRG 187
BLAST of mRNA_Ecto-sp8_S_contig923.30619.1 vs. uniprot
Match: A0A6H5JH77_9PHAE (S5A_REDUCTASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH77_9PHAE) HSP 1 Score: 366 bits (940), Expect = 1.730e-116 Identity = 217/337 (64.39%), Postives = 233/337 (69.14%), Query Frame = 1
Query: 1 MSTTPATDRKPGGGFGKDLANVLFCGLLAQGVAYPLGLDAAAALAMGIQARSSPPCKCCDALILAWVPSALAQNETFYDFTGMLTFMAVTTFSTLGFLRRFFDGEMIA---MFGEGSSLAMEHPVSIATAAPRHVVATALVL---TWTTRLGTFLFARIRRDGHDSRFNGVRDRPLKFLVFWFVQGIWVFFTSLPMLVLHKVDPRGGMGSILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLALMGPLFGIAILTFVSTPMLEEGADKKYGGHAAYHEYKRNTPSLFFRLW 993
MSTTPATDRKPGGGF KDL NVLFCGLLAQGVAYPLGL AAALAMGIQAR + A L + + D G F V F RR DG + G+G+ A++ S APR + L L W + R R R G + L GIWVFFT++PMLVLHKVDPRG MG+ILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLAL+GPLFG AILTFVSTPMLE+GADKKYGGHAAYHEYKR TPSLFFRLW
Sbjct: 227 MSTTPATDRKPGGGFVKDLGNVLFCGLLAQGVAYPLGLAGAAALAMGIQARPRV------GAVGAGAERDLLRLHRYADLHGGDNFQHVGL--PAAFFRRG-DGRNVRGRIPAGDGAP-ALDRRCS--PQAPRRH-GSGLDLDHKAWNLSVCEDTARRPRLQVQ--RGAGQASEVSRLL------GIWVFFTAVPMLVLHKVDPRGSMGNILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLALVGPLFGTAILTFVSTPMLEQGADKKYGGHAAYHEYKRTTPSLFFRLW 542
BLAST of mRNA_Ecto-sp8_S_contig923.30619.1 vs. uniprot
Match: D7FIU1_ECTSI (S5A_REDUCTASE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU1_ECTSI) HSP 1 Score: 267 bits (683), Expect = 6.290e-84 Identity = 127/130 (97.69%), Postives = 128/130 (98.46%), Query Frame = 1
Query: 604 MGSILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLALMGPLFGIAILTFVSTPMLEEGADKKYGGHAAYHEYKRNTPSLFFRLW 993
MG+ILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLALMGPLFG AILTFVSTPMLEEGADKKYGGHAAYHEYKR TPSLFFRLW
Sbjct: 1 MGNILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLALMGPLFGTAILTFVSTPMLEEGADKKYGGHAAYHEYKRTTPSLFFRLW 130
BLAST of mRNA_Ecto-sp8_S_contig923.30619.1 vs. uniprot
Match: A0A835YPX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPX5_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.980e-58 Identity = 121/311 (38.91%), Postives = 166/311 (53.38%), Query Frame = 1
Query: 55 LANVLFCGLLAQGVAYPLGLDAAAALAMGIQARSSPPCKCCDALILAWVPSALAQNETFYDFTGMLTFMAVTTFSTLGFLRRFFDGEMIAMFGEGSSLAMEHPVSIATAAPRHVVATALVLTWTTRLGTFLFARIRRDGHDSRFNGVRDRPLKFLVFWFVQGIWVFFTSLPMLVLHKVDPRGGMGSILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGS-GWLALMGPLFGIAILTFVSTPMLEEGADKKYGGHAAYHEYKRNTPSLFF 984
+ ++ + Q +AYP+GL+ AL +GIQ L ++PS + E FYD TG TF+ + +T GF R G G R ++AT +V+ W RLGT+LFAR+ R G DSRFNGVRD + L+FW VQG+W T + +L+L P + D G A W G A+EV AD QK A++A N GKFIDVG+WS RHPNY+GE+ LW G + C G+ GW L+ P+F + ++S P++EE ADKK+GG A Y YKR T +L +
Sbjct: 45 IVQIICMAIFTQALAYPVGLNKPVALGLGIQ-------------WLVYLPSLALKTERFYDLTGSSTFILL---ATTGFARN----------GAGFDWHSNW---------RQLLATGMVVAWAARLGTYLFARVCRVGEDSRFNGVRDNAARALLFWTVQGVWTVVTPMAVLMLQAAPP---VAERCWWDYAGGAAWLLGMAIEVAADAQKSAWQAVPTNWGKFIDVGMWSWSRHPNYVGEVLLWWGVWGVCYGGLRGQPWGWYTLVAPVFVSLLFVYISVPLIEEHADKKWGGLAEYQAYKRRTRALLY 317
BLAST of mRNA_Ecto-sp8_S_contig923.30619.1 vs. uniprot
Match: A0A849GG99_9GAMM (DUF1295 domain-containing protein n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A849GG99_9GAMM) HSP 1 Score: 201 bits (512), Expect = 2.020e-56 Identity = 117/286 (40.91%), Postives = 160/286 (55.94%), Query Frame = 1
Query: 139 GIQARSSPPCKCCDALI-----LAWVPSALAQNETFYDFTGMLTFMAVTTFSTLGFLRRFFDGEMIAMFGEGSSLAMEHPVSIATAAPRHVVATALVLTWTTRLGTFLFARIRRDGHDSRFNGVRDRPLKFLVFWFVQGIWVFFTSLPMLVLHKVDPRGGMGSILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLALMGPLFGIAILTFVS-TPMLEEGADKKYGGHAAYHEYKRNTPSL 978
G+ A S P C AL LA+VPSALAQ E FYD TG +T++ VT ++A+ G+ R ++ A+V+ W+ RL TFLF RI RDG DSRF+ +++RPL+F + W +QG+WV T+ L + R +G+I G+ +WA G +E+VAD QK F++D N G+FI GLW+ RHPNY GE+ LW G I V+ G W L+ P+F +LT VS PMLEE ADK++GG Y +YKR+TP L
Sbjct: 31 GVSAGSVPLFALCGALAFIINWLAFVPSALAQTERFYDLTGGITYITVT---------------VVAVLLSGADDI------------RALLVAAMVMVWSLRLATFLFRRISRDGKDSRFDNIKNRPLRFFMAWTLQGLWVLLTAAAALAVITGGEREPLGAI---GIAGIVIWAAGMLIEIVADRQKSNFRSDPDNKGRFISTGLWAWSRHPNYFGEIVLWTGMAIIAVP-VLQGWQWATLISPVFVTFLLTRVSGVPMLEEQADKRWGGQDDYEQYKRSTPVL 285
BLAST of mRNA_Ecto-sp8_S_contig923.30619.1 vs. uniprot
Match: A0A6C7E8C9_ILUCY (S5A_REDUCTASE domain-containing protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E8C9_ILUCY) HSP 1 Score: 201 bits (511), Expect = 3.270e-56 Identity = 113/266 (42.48%), Postives = 153/266 (57.52%), Query Frame = 1
Query: 187 ILAWVPSALAQNETFYDFTGMLTFMAVTTFSTLGFLRRFFDGEMIAMFGEGSSLAMEHPVSIATAAPRHVVATALVLTWTTRLGTFLFARIRRDGHDSRFNGVRDRPLKFLVFWFVQGIWVFFTSLPMLVLHKVDPRGGMGSILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLALMGPLFGIAILTFVS-TPMLEEGADKKYGGHAAYHEYKRNTPSLF 981
++A+VPS LA+ E FYD TG +T+++VT + LA+ + R V+ A+V W RLG+FLFARIRRDG D RF+ +R +FL+ W +QG+WVF T L + D R +G I G+ VW GFA+EVVAD QK AF+AD AN G+FI GLW+ RHPNY GE+TLWAG I + V++G W+AL+ P+F +LT VS P+LE A K++G + Y +TP LF
Sbjct: 56 LVAFVPSYLAKTEKFYDATGSITYLSVTAIT----------------------LAVSDDIDA-----RAVIVAAMVAVWAVRLGSFLFARIRRDGSDGRFDTIRGDFRRFLMTWMLQGLWVFLTLAAALAIITSDDREDLGIIAVV---GIVVWVAGFAIEVVADAQKSAFRADPANDGRFITTGLWAWSRHPNYFGEITLWAGIAIM-ALPVLSGWRWVALISPVFVYILLTRVSGVPLLEYRAKKRWGDEPEFQSYTEHTPVLF 290
BLAST of mRNA_Ecto-sp8_S_contig923.30619.1 vs. uniprot
Match: A0A520WYX4_9GAMM (DUF1295 domain-containing protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A520WYX4_9GAMM) HSP 1 Score: 201 bits (510), Expect = 3.830e-56 Identity = 112/264 (42.42%), Postives = 152/264 (57.58%), Query Frame = 1
Query: 190 LAWVPSALAQNETFYDFTGMLTFMAVTTFSTLGFLRRFFDGEMIAMFGEGSSLAMEHPVSIATAAPRHVVATALVLTWTTRLGTFLFARIRRDGHDSRFNGVRDRPLKFLVFWFVQGIWVFFTSLPMLVLHKVDPRGGMGSILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLALMGPLFGIAILTFVS-TPMLEEGADKKYGGHAAYHEYKRNTPSL 978
LA++PSA+AQ E +YD G +T++ VT + L L+ E + R + +VL W+ RL TFLF RI R G DSRF+ ++ RP+ FL+ W +QG+WV T+ L + R +G I G+A+W GF +EVVAD QK FKAD AN GKFI+VGLW+ RHPNY GE+ +W G + + V+ G W L+ P+F I +LT VS PMLE+ AD+++GG Y EYKRNTP L
Sbjct: 53 LAFIPSAIAQTEHYYDLVGGITYITVTIVAVL--------------------LSTELDL-------RSTIVAGMVLVWSLRLATFLFRRISRAGKDSRFDTIKTRPVSFLMAWTIQGLWVLLTAAAALAVITGGNREPLGVI---GYLGIAIWLAGFVIEVVADRQKSNFKADPANKGKFINVGLWAWSRHPNYFGEIVIWTGIAVI-ALPVLQGWQWATLISPVFVIFLLTKVSGVPMLEQKADERWGGQDDYEEYKRNTPVL 285
BLAST of mRNA_Ecto-sp8_S_contig923.30619.1 vs. uniprot
Match: A0A850C499_9CHLR (DUF1295 domain-containing protein n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A850C499_9CHLR) HSP 1 Score: 199 bits (506), Expect = 1.260e-55 Identity = 119/276 (43.12%), Postives = 155/276 (56.16%), Query Frame = 1
Query: 190 LAWVPSALAQNETFYDFTGMLTFMAVTTFSTLGFLRRFFDGEMIAMFGEGSSLAMEHPVSIATAAPRHVVATALVLTWTTRLGTFLFARIRRDGHDSRFNGVRDRPLKFLVFWFVQGIWVFFTSLPMLV-----LHKVDPRGGMGSILAQDAF---GLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLALMGPLFGIAILTFVS-TPMLEEGADKKYGGHAAYHEYKRNTPSLFFRL 990
LA++P+ L Q E FYD TG LT++ VT G++LA + R ++ ALV+ W RLGTFLF+RIR+ G D RF+ ++ ++FL W +QG+WV FT+ LV +HK +P DAF G +W GFA EV+AD QK F AD AN GKFI GLWSR RHPNY GE+ LW G + V+ G W+A++ PLF +LT VS P+LE+ AD K+GG A Y EYK+NTP L RL
Sbjct: 50 LAFIPAYLLQTEKFYDLTGSLTYLTVT----------------------GAALAFSPNLDT-----RSILLAALVIIWALRLGTFLFSRIRKAGKDDRFDEIKPSFIRFLNAWTIQGLWVTFTAAAALVAITSSVHK-EP----------DAFAVIGFLIWVFGFAFEVIADSQKSRFNADPANKGKFIQSGLWSRSRHPNYFGEIVLWIGVALIAIP-VLQGWQWVAMISPLFVTLLLTRVSGIPLLEKKADAKWGGQAEYEEYKKNTPVLIPRL 286
BLAST of mRNA_Ecto-sp8_S_contig923.30619.1 vs. uniprot
Match: A0A844ZVD5_9SPHN (DUF1295 domain-containing protein n=1 Tax=Pontixanthobacter aquaemixtae TaxID=1958940 RepID=A0A844ZVD5_9SPHN) HSP 1 Score: 198 bits (503), Expect = 4.210e-55 Identity = 108/270 (40.00%), Postives = 149/270 (55.19%), Query Frame = 1
Query: 190 LAWVPSALAQNETFYDFTGMLTFMAVTTFSTLGFLRRFFDGEMIAMFGEGSSLAMEHPVSIATAAP---RHVVATALVLTWTTRLGTFLFARIRRDGHDSRFNGVRDRPLKFLVFWFVQGIWVFFTSLPMLVLHKVDPRGGMGSILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLALMGPLFGIAILTFVS-TPMLEEGADKKYGGHAAYHEYKRNTPSLFFR 987
+A++P+A+AQ E +YD G +T++ + T V+ AAP R +V A+V W+ RLG+FLF RI DGHD RF+ ++ P +FLV W +Q W FT+ + + D +G G VW GFA+EVVAD QKRAFK D AN GKFI GLW+ +HPNY GE+ LW G I +++G+GWL ++ P+F +LT VS ML++ ADKK+G AY +Y+RNTP L R
Sbjct: 54 IAFIPAAIAQTEKYYDLVGSITYLTIIT------------------------------VACVLAAPLDMRAIVVAAMVAVWSIRLGSFLFKRISEDGHDGRFDKIKINPARFLVAWTLQACWGLFTAAAAIAIIAADSPAPLGVFFW---LGAIVWVAGFAIEVVADRQKRAFKKDDANKGKFIQSGLWAWSQHPNYFGEIMLWTGILIIAVP-LLSGAGWLVVISPVFVTFLLTKVSGIAMLDKAADKKWGDDPAYQQYRRNTPVLILR 289
BLAST of mRNA_Ecto-sp8_S_contig923.30619.1 vs. uniprot
Match: A0A2S5V0V7_9MICO (S5A_REDUCTASE domain-containing protein n=1 Tax=Pseudoclavibacter sp. AY1F1 TaxID=2080583 RepID=A0A2S5V0V7_9MICO) HSP 1 Score: 197 bits (502), Expect = 8.560e-55 Identity = 112/271 (41.33%), Postives = 153/271 (56.46%), Query Frame = 1
Query: 187 ILAWVPSALAQNETFYDFTGMLTFMAVTTFSTLGFLRRFFDGEMIAMFGEGSSLAMEHPVSIATAAPRHVVATALVLTWTTRLGTFLFARIRRDGHDSRFNGVRDRPLKFLVFWFVQGIWVFFTSLP--MLVLHKVDPRGGMGSILAQDAFGLAVWATGFALEVVADGQKRAFKADAANAGKFIDVGLWSRCRHPNYLGEMTLWAGFFIFCSRGVVAGSGWLALMGPLFGIAILTFVS-TPMLEEGADKKYGGHAAYHEYKRNTPSLFFRL 990
++ ++PSA+A+ E F+D TG TF+ VT G +A P + R + A+V+ W RLG+FLFARI R G D RF+ ++ L+FL W +QG+WV T+ + + V+ R +G + G+ +WA GF +EV AD QK AFKAD AN G+FI GLWSR RHPNY GE+ LW G + + V+ G W+AL+ P+F +L+ VS P+LE ADKK+GG A Y EYKR TP L RL
Sbjct: 62 VIVYLPSAVAKTERFFDLTGSATFIVVTV---------------------GLLIASPSPDA------RSWILGAMVILWAIRLGSFLFARIHRSGSDDRFDDIKGNKLRFLRVWVMQGLWVSLTAAAAWIAIAGGVEDREPIGWLAI---LGIVIWAAGFVIEVTADLQKNAFKADPANTGRFIRTGLWSRSRHPNYFGEILLWVGVAVVAAP-VLVGWQWIALISPIFVTLLLSRVSGVPLLEAKADKKWGGQADYEEYKRTTPVLLPRL 301 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig923.30619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig923.30619.1 >prot_Ecto-sp8_S_contig923.30619.1 ID=prot_Ecto-sp8_S_contig923.30619.1|Name=mRNA_Ecto-sp8_S_contig923.30619.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=332bp MSTTPATDRKPGGGFGKDLANVLFCGLLAQGVAYPLGLDAAAALAMGIQAback to top mRNA from alignment at Ecto-sp8_S_contig923:3312..11696- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig923.30619.1 ID=mRNA_Ecto-sp8_S_contig923.30619.1|Name=mRNA_Ecto-sp8_S_contig923.30619.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=8385bp|location=Sequence derived from alignment at Ecto-sp8_S_contig923:3312..11696- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig923:3312..11696- >mRNA_Ecto-sp8_S_contig923.30619.1 ID=mRNA_Ecto-sp8_S_contig923.30619.1|Name=mRNA_Ecto-sp8_S_contig923.30619.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=996bp|location=Sequence derived from alignment at Ecto-sp8_S_contig923:3312..11696- (Ectocarpus species8 EcLAC_412)back to top |