mRNA_Ecto-sp8_S_contig9211.30590.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9211.30590.1 vs. uniprot
Match: D8LN45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN45_ECTSI) HSP 1 Score: 290 bits (742), Expect = 2.110e-98 Identity = 150/158 (94.94%), Postives = 154/158 (97.47%), Query Frame = 1
Query: 1 MKACGSRRNGTDSLYALALCRTTGAFFLASHVSSVPSPEGDFCLALDLQDNEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEV 474
MKACGSRRNGTDS YALALCRTTGAF LAS VSSVPSPEG+FCLALDLQ+NEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGH QSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLC+TE+
Sbjct: 1 MKACGSRRNGTDSPYALALCRTTGAFILASQVSSVPSPEGNFCLALDLQENEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHIQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCVTEM 158
BLAST of mRNA_Ecto-sp8_S_contig9211.30590.1 vs. uniprot
Match: A0A6H5K249_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K249_9PHAE) HSP 1 Score: 234 bits (598), Expect = 4.000e-76 Identity = 122/137 (89.05%), Postives = 128/137 (93.43%), Query Frame = 1
Query: 64 TTGAFFLASHVSSVPSPEGDFCLALDLQDNEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEV 474
TTGAFFLA+ SSVPS EG FCL LDLQ++EDVTFSD LGFV NNGIL+IQF LLLA+FVKPLMIPQGHTQSGGAVYRRLVMRNVACTI ITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTE+
Sbjct: 52 TTGAFFLAAQASSVPSLEGTFCLTLDLQEDEDVTFSDALGFVINNGILIIQFALLLAIFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEL 188
BLAST of mRNA_Ecto-sp8_S_contig9211.30590.1 vs. uniprot
Match: A0A6H5JPA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA3_9PHAE) HSP 1 Score: 235 bits (599), Expect = 2.520e-74 Identity = 122/137 (89.05%), Postives = 128/137 (93.43%), Query Frame = 1
Query: 64 TTGAFFLASHVSSVPSPEGDFCLALDLQDNEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEV 474
TTGA FLA+ SSVPS EG FCL LDL+++EDVTFSDTLGFV NNGIL+IQF LLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTI ITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTE+
Sbjct: 153 TTGALFLAAQASSVPSLEGTFCLTLDLKEDEDVTFSDTLGFVINNGILIIQFALLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEI 289
BLAST of mRNA_Ecto-sp8_S_contig9211.30590.1 vs. uniprot
Match: D8LN53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN53_ECTSI) HSP 1 Score: 120 bits (301), Expect = 4.240e-32 Identity = 59/99 (59.60%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 178 LGFVFNNGILVIQFVLLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEV 474
+GF NN +L +QFVLLLAMF+KP+++PQG TQSGGAVYRR+V+RN+ CT+GI Y +TTV+VVL ++T + KAA L + P+ NI VTLCLTEV
Sbjct: 2 IGFASNNALLTVQFVLLLAMFIKPMLLPQGGTQSGGAVYRRVVVRNIVCTVGIACAYVITTVVVVLAHVSTPSDTNKAAVLGHITPSINICVTLCLTEV 100
BLAST of mRNA_Ecto-sp8_S_contig9211.30590.1 vs. uniprot
Match: A0A6H5JPA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA0_9PHAE) HSP 1 Score: 124 bits (312), Expect = 6.580e-32 Identity = 63/120 (52.50%), Postives = 85/120 (70.83%), Query Frame = 1
Query: 115 EGDFCLALDLQDNEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEV 474
EG C ++ E D GF NN +L +Q+VLLLAMF+KP+++ G+TQSGGAVYRR+V+RN+ CTIGI Y +TTV+VVL L++ P + KAA + D++P+ NI VTLCLTEV
Sbjct: 124 EGTACFNSYGEETETREVGDVAGFAGNNVLLTVQYVLLLAMFIKPMLVSHGNTQSGGAVYRRVVIRNIVCTIGIACAYVITTVVVVLALLSSRPDTDKAAAVGDIVPSINICVTLCLTEV 243
BLAST of mRNA_Ecto-sp8_S_contig9211.30590.1 vs. uniprot
Match: D7G2C9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C9_ECTSI) HSP 1 Score: 102 bits (253), Expect = 7.590e-24 Identity = 58/136 (42.65%), Postives = 83/136 (61.03%), Query Frame = 1
Query: 73 AFFLASHVSSVPSPEGDFCL--ALDLQDNEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEV 474
A L + P G FC + +E T ++ F NN +LV+QF+LLL +FV+P+++ QSGGAVYRR+V+RNV CT GI +YA+TT++VV+ L + S K+AQ+ D+ AN TLCLTE+
Sbjct: 25 ALMLGTRFPGGTDPAGTFCYNGIVPTGASELTTSNNAQSFGINNVLLVVQFILLLGLFVQPMLVRVEGAQSGGAVYRRVVLRNVFCTAGIVISYAITTLVVVIALLRESVESNKSAQIRDVALAANSLGTLCLTEI 160
BLAST of mRNA_Ecto-sp8_S_contig9211.30590.1 vs. uniprot
Match: A0A6H5JY97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY97_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 7.290e-21 Identity = 53/118 (44.92%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 124 FCL-ALDLQDNEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEV 474
FC+ + D+ D + LG+ N G LVIQFVLLL +FV+PL++ +QSG A+YR +V++N+ CTI + YAVTTV+V+ + + S A+ AD+ P N FVTLCLTE+
Sbjct: 193 FCVNGYHMDDDTDEVNDNVLGYGSNMGSLVIQFVLLLILFVRPLLVRLEGSQSGEAMYRMVVIKNITCTIAVVTAYAVTTVVVIAALIRQSNDSNTASLFADITPLVNQFVTLCLTEI 310
BLAST of mRNA_Ecto-sp8_S_contig9211.30590.1 vs. uniprot
Match: D8LN54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN54_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 3.450e-19 Identity = 45/96 (46.88%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 73 AFFLASHVSSVPSPEGDFCLALDLQDNEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIGITFTYAVTT 360
A FL + EG C ++ + D GF NN +L +Q+VLLLAMF+KP+++ QG+TQSGGAVYRR+V+RN+ CTIGI Y +TT
Sbjct: 100 ATFLGLTFPGEVNSEGTACFNSYREETDTAEVGDVAGFASNNVLLTVQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTIGIACAYVITT 195
BLAST of mRNA_Ecto-sp8_S_contig9211.30590.1 vs. uniprot
Match: D7G4H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H2_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 8.780e-16 Identity = 44/80 (55.00%), Postives = 55/80 (68.75%), Query Frame = 1
Query: 178 LGFVFNNGI-LVIQFVLLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAA 414
+GF+ NN + LVIQ LLLAMFVK +MI QG TQSG AVYRRLV R++ CT+ + Y TT +VVL L PG+ + A
Sbjct: 1 MGFMTNNNMMLVIQLTLLLAMFVKLIMISQGSTQSGRAVYRRLVARSIVCTVAVVLGYTTTTAVVVLAVLAAFPGNNQIA 80
BLAST of mRNA_Ecto-sp8_S_contig9211.30590.1 vs. uniprot
Match: D8LG96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG96_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 2.850e-13 Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 1
Query: 115 EGDFCL-ALDLQDNEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFL 384
E FC+ ++ D+ D + G+ N G L+IQFVLLL +FV+PL++ +QSG A+YRR+V++N+ CTI + YAVTTV+V+ L
Sbjct: 187 ERTFCINGYNMDDDADEVHENIRGYGSNMGSLIIQFVLLLILFVRPLLVRLEGSQSGEAIYRRVVIKNITCTIAVVTAYAVTTVVVIAALL 277 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9211.30590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9211.30590.1 >prot_Ecto-sp8_S_contig9211.30590.1 ID=prot_Ecto-sp8_S_contig9211.30590.1|Name=mRNA_Ecto-sp8_S_contig9211.30590.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=160bp MKACGSRRNGTDSLYALALCRTTGAFFLASHVSSVPSPEGDFCLALDLQDback to top mRNA from alignment at Ecto-sp8_S_contig9211:21..2554- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9211.30590.1 ID=mRNA_Ecto-sp8_S_contig9211.30590.1|Name=mRNA_Ecto-sp8_S_contig9211.30590.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2534bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9211:21..2554- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9211:21..2554- >mRNA_Ecto-sp8_S_contig9211.30590.1 ID=mRNA_Ecto-sp8_S_contig9211.30590.1|Name=mRNA_Ecto-sp8_S_contig9211.30590.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=480bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9211:21..2554- (Ectocarpus species8 EcLAC_412)back to top |