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Homology
BLAST of mRNA_Ecto-sp8_S_contig9187.30538.1 vs. uniprot
Match: D8LR49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR49_ECTSI) HSP 1 Score: 951 bits (2457), Expect = 0.000e+0 Identity = 616/682 (90.32%), Postives = 622/682 (91.20%), Query Frame = 1
Query: 1 QVYDIRRATFIEIDHVRRLLDHIYGSAHSETVDQALAWLFRVSSREDEMDADEFIARLTPVVDFRGTAAAAQAEPLLQWFRVLCTRILEEPHRAVVALEQRYNPERDLNKVVTKYKLSAGLTDVLCRRHAFICRRSSASALDVQEWLSSVGYLFPETLARRVFQYFAQSGGLAWTVADLLRFLCSWVLDSRQEHVSMMFQGRHIRFAP--VIPIPLPPVPDALLRQNIAPLKTNTRRVNKKHRKHTT-LKLFDVDRDGLLSEREVAQMLEHLAVYHAHRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----ADMASLTLGLRKLGYEDLESLVLIDKQYGADAAXXXXXXXXXXXXXXX--GGVRDSTDGTTRAVARKLLRDMRATSERYVVDLVYACLAEFGMRPAKAVQEREVIHEIFRRHDVALDDGEGEGLPYGPVGTTWAVINALWWAQWRDYVRIGFDATMPRGSLSRVSSNSSIAXXXXXXXXXXXXXXXXXXXXXXVRSGTVPNGRASXXXXXXDSSGLNRPSPPPPSSIGPTMTPRSRASSRVFGSAPVLGGRGHRVGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXAYLASSSSFATQQTPRPGQIHNGALLEHGGSRRIVRAARLGPDFAIIPPKAWDALQSWYEGGPVLERRVIDYHGTPQLELFP 2019
+VYDIRRATFIEIDHVRRLLDHIYGSAHSETVDQALAWLFRVSSREDEMDADEFIARLTPVVDFRGTAAAAQAEPLLQWFRVLCTRILEEPH AVVALEQRYNPERDL+KVVTKYKLSAGLTDVLCRRHAFICRRSSA+ALDVQEWLSSVGYLFPETLARRVFQYFAQSGGLAWTVADLLRFLCSWVLD RQEHVSMMFQ R IRFA PIPLPPVPDALLRQNIAPLKTNTRRVN+K K+ KLFDVDRDGLLSEREVAQMLEHLAVYHAHRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ADMASLTLGLRKLGYEDLESLVLIDKQYGADAAXXXXXXXXXXXXXXX GGVRD TDGTTRAVARKLL + V DLVYACLAEFGMRPAKAVQEREVIHEIFRRHDVALDDGEGEGLPYGPVGTTWAVINA WWAQWRDYVRIGFDATMPRGSLSRVSSNSSIAXXXXXXXXXXXXXXXXXXXXXX XXXXXX SSIGPTMTPRSRASSRVFGSAPVLGGRGHRVGSGXXXXXXXXXXXXXXXXXXXXXXXXXX YLASSSSFATQQTPRPGQIHNGALLEHGGSRRIVRAARLGPDFAIIPPKAWDALQSWYEGGPVLERRVIDYHGTPQLELFP
Sbjct: 130 EVYDIRRATFIEIDHVRRLLDHIYGSAHSETVDQALAWLFRVSSREDEMDADEFIARLTPVVDFRGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLSKVVTKYKLSAGLTDVLCRRHAFICRRSSANALDVQEWLSSVGYLFPETLARRVFQYFAQSGGLAWTVADLLRFLCSWVLDPRQEHVSMMFQARRIRFALSCYTPIPLPPVPDALLRQNIAPLKTNTRRVNEKTSKNIRRCKLFDVDRDGLLSEREVAQMLEHLAVYHAHRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADMASLTLGLRKLGYEDLESLVLIDKQYGADAAXXXXXXXXXXXXXXXXXGGVRDGTDGTTRAVARKLLLML-------VKDLVYACLAEFGMRPAKAVQEREVIHEIFRRHDVALDDGEGEGLPYGPVGTTWAVINAQWWAQWRDYVRIGFDATMPRGSLSRVSSNSSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSIGPTMTPRSRASSRVFGSAPVLGGRGHRVGSGXXXXXXXXXXXXXXXXXXXXXXXXXX--YLASSSSFATQQTPRPGQIHNGALLEHGGSRRIVRAARLGPDFAIIPPKAWDALQSWYEGGPVLERRVIDYHGTPQLELFP 802
BLAST of mRNA_Ecto-sp8_S_contig9187.30538.1 vs. uniprot
Match: A0A6H5KLB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLB3_9PHAE) HSP 1 Score: 865 bits (2235), Expect = 5.690e-291 Identity = 550/807 (68.15%), Postives = 561/807 (69.52%), Query Frame = 1
Query: 1 QVYDIRRATFIEIDHVRRLLDHIYGSAHSETVDQALAWLFRVSSREDEMDADEFIARLTPVVDFRGTAAAAQAEPLLQWFRVLCTRILEEPHRAVVALEQRYNPERDLNKVVTKYKLSAGLTDVLCRRHAFICRRSSASALDVQEWLSSVGYLFPETLARRVFQYFAQSGGLAWTVADLLRFLCSWVLDSRQEHVSMMFQGRHIRFAPVIPIPLPPVPDALLRQNIAPLKTNTRRVNKKHRKHTTLKLFDVDRDGLLSEREVAQMLEHLAVYHAHRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------ADMASLTLGLRKLGYEDLESLVLIDKQYGADAAXXXXXXXXXXXXXXXG--GVRDSTDGTTRAVARKLLRDMRATSERYVV------------------------------------------------------------------------------------------------------------------DLVYACLAEFGMRPAKAVQEREVIHEIFRRHDVALDDGEGEGLPYGPVGTTWAVINALWWAQWRDYVRIGFDATMPRGSLSRVSSNSSIAXXXXXXXXXXXXXXXXXXXXXXVRSGTVPNGRASXXXXXXDSSGLNRPSPPPPSSIGPTMTPRSRASSRVFGSAPVLGGRGHRVGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXAYLASSSSFATQQTPRPGQIHNGALLEHGGSRRIVRAARLGPDFAIIPPKAWDALQSWYEGGPVLERRVIDYHGTPQLELFP 2019
+VYDIRRATFIEIDHVRRLLDHIYGSAHSETVDQALAWLFRVSSREDEMDADEFIARLTPVVDFRGTAAAAQAEPLLQWFRVLCTRILEEPH AVVALEQRYNPERDLNKVVTKYKLSAGLTDVLCRR AFICRRSSA+ALDVQEWLS+VGYLFPE LARRVFQYFAQSGGLAWTVADL+RFLCSWVLDSRQEHVS++FQ LFDVDRDGLLSEREV QMLEHLAVYHAHRASG XXXXXXXXXXXXXXXXXXXXXXXXXXXX DMASLTLGLRKLGYEDLESL+LIDKQYGADAA XXXXX G GVRDS DGTTRAVARKLLRDMRATS+RYVV DLVYACLAEFGM+PAKAVQEREVIHEIFRRHDVALDDGEGEGLPYGPVGTTWAVINA W A WRDYVRIGFDATMPRGSLSRVSSNSSIA XXXXXXXXX VRSGTV NGRAS DSSGLNRPSPPPPSSIGPTMTPRSRASSRVFGSAPVLGGRGHR G XXXXXXXXXXXXXXX F TQQTPRPGQIHNGALLEHGGSRRIVR ARLGPDFAIIPPKAWDALQSWY+GGP+LERRVIDYHGTPQLELFP
Sbjct: 107 EVYDIRRATFIEIDHVRRLLDHIYGSAHSETVDQALAWLFRVSSREDEMDADEFIARLTPVVDFRGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLNKVVTKYKLSAGLTDVLCRRQAFICRRSSANALDVQEWLSAVGYLFPEALARRVFQYFAQSGGLAWTVADLIRFLCSWVLDSRQEHVSIIFQ-----------------------------------------------LFDVDRDGLLSEREVEQMLEHLAVYHAHRASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMASLTLGLRKLGYEDLESLILIDKQYGADAAAXXXXXTTGSGCDGGGSGGVRDSADGTTRAVARKLLRDMRATSDRYVVVPPASPASSPATSTAFPLSQQPPTPPIPRLPQQXXXXNRQGPVAGAXXXXXAAVNNAGGPASEEGWGLRGGSGVVGRGGLTXXXXXXXXXXXXXXXXXFMAWSSVHGGRLMLVKDLVYACLAEFGMQPAKAVQEREVIHEIFRRHDVALDDGEGEGLPYGPVGTTWAVINARWLAGWRDYVRIGFDATMPRGSLSRVSSNSSIASXXXXXXXXXRQGPPATVAGAGVRSGTVANGRASGGGVGGDSSGLNRPSPPPPSSIGPTMTPRSRASSRVFGSAPVLGGRGHRFGGANGXXXXXXXXXXXXXXX------------------FTTQQTPRPGQIHNGALLEHGGSRRIVRTARLGPDFAIIPPKAWDALQSWYDGGPLLERRVIDYHGTPQLELFP 848
BLAST of mRNA_Ecto-sp8_S_contig9187.30538.1 vs. uniprot
Match: A0A835YVN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN1_9STRA) HSP 1 Score: 194 bits (494), Expect = 2.130e-48 Identity = 233/758 (30.74%), Postives = 306/758 (40.37%), Query Frame = 1
Query: 1 QVYDIRRATFIEIDHVRRLLDHIYGSAHSETVDQALAWLFRVSSREDEMDADEFIARLTPVVDFRGTAAAAQAEPLLQWFRVLCTRILEEPHRAVVALEQRYNPERDLNKVVTKYKLSAGLTDVLCRRHAFICRRSSASALDVQEWLSSVGYLFPETLARRVFQYFAQSGGLAWTVADLLRFLCSWVLDSRQEHVSMMFQGRHIRFAPVIPIPLPPVPDALLRQNIAPLKTNTRRVNKKHRKHTTLKLFDVDRDGLLSEREVAQMLEHLAVYHAHRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADMASLTLGLRKL----------GYEDLESLVLIDKQ------------YGADAAXXXXXXXXXXXXXXXGGVRDSTD-GTTRAVARKLLRDMRATSERYVV------------------------------------------------------------DLVYACLAEFGMRPAKAVQEREVIHEIFRRHDVALDDGEGEGLPYGPVGTTWAVINALWWAQWRDYVRIGFDATMPRGSLSRVSSNSSIAXXXXXXXXXXXXXXXXXXXXXXVRSGTVPNGRASXXXXXXDSSGLNRPSPPPPSSIGPTMTPRSRASSRVFGSAPVLGGRGHRVGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXAYLASSSSFATQQTPRPGQIHNGALLEHGG--SRRIVRAARLGPDFAIIPPKAWDALQSWYEGGPVLERRVIDYHGTPQLELFP 2019
++YD+RR F+E + +RRLLD +Y + +D AL LF R D +D +EF A VV + PL QWFR++C R +EE VVALEQRYNPER+L ++ KY++ +L R+H + ++ A +D+ WLS + LA R F+ F++ + WTV+D + F C+ V S EHV+++F LFD DRDG+LS E+ MLE LA +H HR A AS G +L E D++ A AA G +R + G A A LL +MR S++YV DL + +AE GMRPA A QER+V+ E R++D AL E YG VGT W +I+ +WW +W Y R R +S+ A XXXXXXXXXXXXXXXXXXX + G FG+ G G +G G XXXXXXXXXXXXXXXXXXXXXXXX A RPG I N AL+ R+ R+G DF ++PP AW +LQ+WYEGGP +ER V G LEL+P
Sbjct: 139 EIYDVRRCGFVERERLRRLLDLVYAPEDAAAIDAALGCLFSGCQRGDRLDFEEFRA----VVANANVKQRSALGPLTQWFRIVCARSIEEADPGVVALEQRYNPERELARLARKYRILPAQQALLERKHMQLRQKGEAGRMDIGVWLSLAASVMHGDLAERCFRAFSRGPPMQWTVSDYVHFCCAAVRGSHHEHVTIVFN-----------------------------------------------LFDDDRDGMLSIPELELMLESLAWHHMHREG------------LLPHQQAHHPARSRRPSAAAAASAPHGTGRLLRAGXXXXXXXXEGTPRRQSFDRRPDGRARSGSVNSSSAQAAAAAALSMYDDRALVPGLLRLGCEAGDVAAAAAALLAEMRLLSDKYVGACVQGGQGAEEGRSVGXXXXXXXXXXXXXXXSDGAPCDGLTFAGYMAWSAAHPGRMQLLHDLAFIAIAECGMRPATAAQERDVVSEHMRQYD-ALHGREVPLFRYGAVGTPWNLIDQVWWNRWCAYARF------------RRASDDLSAAXXXXXXXXXXXXXXXXXXXSAITGGDG------------------------------------------FGAIGGAGAGGSAIGGGGGXXXXXXXXXXXXXXXXXXXXXXXXGA---------AGVVHRPGSISNWALMTVASVDGSRLRDFVRIGRDFKLLPPAAWASLQTWYEGGPPIERAVALMEGHHVLELWP 769
BLAST of mRNA_Ecto-sp8_S_contig9187.30538.1 vs. uniprot
Match: A0A7S3V7L3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7L3_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 8.130e-5 Identity = 31/90 (34.44%), Postives = 48/90 (53.33%), Query Frame = 1
Query: 1165 LVYACLAEFGMRPAKAVQEREVIHEIFRRHDVALDDGEGEGLPYGPVGTTWAVINALWWAQWRDYVRIGFDATMPRGSLSRV-SSNSSIA 1431
L+ AC+ FG++P ER ++ EI R E GP+GTTW +IN LWW +W Y + G ++P + ++ +SN S+A
Sbjct: 939 LIGACV--FGIKPYSPSMERNLVKEIQNRFKYKYPSSES--AKRGPLGTTWYIINTLWWKEWERYSKEGRHFSLPSINNDQLLASNRSLA 1024
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 0 |
| Seed ortholog score | 951.0 |
| Seed ortholog evalue | 2.9e-274 |
| Seed eggNOG ortholog | 2880.D8LR49 |
| Model size | 2019 |
| KEGG ko | ko:K11837 |
| Hectar predicted targeting category | other localisation |
| Exons | 10 |
| EggNOG free text desc. | ubiquitinyl hydrolase activity |
| EggNOG OGs | COG5560@1,KOG1870@2759 |
| EC | 3.4.19.12 |
| Cds size | 2019 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko01002,ko04121 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681145269.6311967-CDS-Ecto-sp8_S_contig9187:2..113 | 1681145269.6311967-CDS-Ecto-sp8_S_contig9187:2..113 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig9187 3..113 - |
| 1681145269.6482584-CDS-Ecto-sp8_S_contig9187:651..1173 | 1681145269.6482584-CDS-Ecto-sp8_S_contig9187:651..1173 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig9187 652..1173 - |
| 1681145269.6589935-CDS-Ecto-sp8_S_contig9187:1721..1857 | 1681145269.6589935-CDS-Ecto-sp8_S_contig9187:1721..1857 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig9187 1722..1857 - |
| 1681145269.6720626-CDS-Ecto-sp8_S_contig9187:2211..2300 | 1681145269.6720626-CDS-Ecto-sp8_S_contig9187:2211..2300 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig9187 2212..2300 - |
| 1681145269.69009-CDS-Ecto-sp8_S_contig9187:2597..2865 | 1681145269.69009-CDS-Ecto-sp8_S_contig9187:2597..2865 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig9187 2598..2865 - |
| 1681145269.704187-CDS-Ecto-sp8_S_contig9187:3410..3703 | 1681145269.704187-CDS-Ecto-sp8_S_contig9187:3410..3703 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig9187 3411..3703 - |
| 1681145269.7181594-CDS-Ecto-sp8_S_contig9187:4006..4174 | 1681145269.7181594-CDS-Ecto-sp8_S_contig9187:4006..4174 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig9187 4007..4174 - |
| 1681145269.7311034-CDS-Ecto-sp8_S_contig9187:4947..5049 | 1681145269.7311034-CDS-Ecto-sp8_S_contig9187:4947..5049 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig9187 4948..5049 - |
| 1681145269.7462945-CDS-Ecto-sp8_S_contig9187:6223..6422 | 1681145269.7462945-CDS-Ecto-sp8_S_contig9187:6223..6422 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig9187 6224..6422 - |
| 1681145269.7589037-CDS-Ecto-sp8_S_contig9187:6794..6925 | 1681145269.7589037-CDS-Ecto-sp8_S_contig9187:6794..6925 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig9187 6795..6925 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9187.30538.1 >prot_Ecto-sp8_S_contig9187.30538.1 ID=prot_Ecto-sp8_S_contig9187.30538.1|Name=mRNA_Ecto-sp8_S_contig9187.30538.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=673bp
QVYDIRRATFIEIDHVRRLLDHIYGSAHSETVDQALAWLFRVSSREDEMD
ADEFIARLTPVVDFRGTAAAAQAEPLLQWFRVLCTRILEEPHRAVVALEQ
RYNPERDLNKVVTKYKLSAGLTDVLCRRHAFICRRSSASALDVQEWLSSV
GYLFPETLARRVFQYFAQSGGLAWTVADLLRFLCSWVLDSRQEHVSMMFQ
GRHIRFAPVIPIPLPPVPDALLRQNIAPLKTNTRRVNKKHRKHTTLKLFD
VDRDGLLSEREVAQMLEHLAVYHAHRASGGGGGSHAHQAGHHHRGQHRHH
HLSHHHHHADMASLTLGLRKLGYEDLESLVLIDKQYGADAAAAAITTGGG
SDGGGSGGVRDSTDGTTRAVARKLLRDMRATSERYVVDLVYACLAEFGMR
PAKAVQEREVIHEIFRRHDVALDDGEGEGLPYGPVGTTWAVINALWWAQW
RDYVRIGFDATMPRGSLSRVSSNSSIASNGGGGSSSGRQGPPATVAGGGV
RSGTVPNGRASGGGVGGDSSGLNRPSPPPPSSIGPTMTPRSRASSRVFGS
APVLGGRGHRVGSGGGGGGEGGGQGAVGGGVGANGGGGGGGAYLASSSSF
ATQQTPRPGQIHNGALLEHGGSRRIVRAARLGPDFAIIPPKAWDALQSWY
EGGPVLERRVIDYHGTPQLELFP back to topmRNA from alignment at Ecto-sp8_S_contig9187:3..6925- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp8_S_contig9187.30538.1 ID=mRNA_Ecto-sp8_S_contig9187.30538.1|Name=mRNA_Ecto-sp8_S_contig9187.30538.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6923bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9187:3..6925- (Ectocarpus species8 EcLAC_412)
CAGGTGTACGACATCCGACGGGCCACGTTCATCGAGATCGACCACGTCCG
GCGCCTCCTGGACCATATCTACGGCTCGGCGCACTCCGAAACCGTCGACC
AGGCGCTGGCCTGGCTCTTCCGCGTGTCGAGGTCAGCATCAGGACGGGGA
TGACCGTGGGGGGGAGAGAGGGAGGGGAGGTGTCAGGCCTCGTACTGGCT
TGAAAGTAGCGGAAGGGGTGGGGTGTCTTTTGGTAGTGTTTTGTTTGGTG
GAGGCGGAGACCGGGGAAACGAAGGAGCGACGTCTTTCCGTTCCTTCTCT
TTGTTTGTTTGCTGGCGTAGCGCTCATGCAAGAATCCTTGGTAAGCTTAC
TTTTTTTTGCTAGAACTTGACCCAAGTTATTACAATGCCTCACTGGCGTG
TGGTGGAAAAATAAATACCCGTTGTTTTGCGGCTGCTTTTGTCGTTGTCG
CTGCTGCTTTTGTCTTTAATCGCCGCTAAACCTACCACCACAACAACACG
CAGCCGCGAGGACGAGATGGACGCTGACGAGTTCATCGCGCGGCTCACCC
CTGTCGTCGACTTCCGGGGCACGGCGGCGGCCGCGCAGGCCGAGCCCCTC
CTGCAGTGGTTCCGTGTCCTGTGCACCCGTATCCTGGAGGAGCCGCACCG
GGCGGTGGTGGCGCTGGAGCAGAGGTACAACCCGGAGAGGGACCTGAACA
AGGTGAGGGCTAGGCTGGCTCTTGCGGGGGGGGGGGGGGGGGGGGGGGGC
AGGGGCAACAACAACAGACAACCCAACCTGGGGTCAGCGAGCAGAACCAA
AAACCCCCGACAAGCAACAAANNNNNNNNNNGGGGGGCGTGGGGGGGGTG
GGCAGGGCGGGCGCGGGCAGGCGGGTGGGAAGGGCGCGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTACCGTGGGT
TGCATAAGAGGTCACACCCCCTGGAGCGATGTTCGAAGCTCGATACACAT
CTCGGCAAAAAAAGCAGTGACGGACGATGCCGAAAATGGCGGGAGGCGTA
GGAAACCGTCTCGTCGATAGCTTTCCGAAAACGTATGCTTCAATTTCGGC
ATCCTCTTTTCGTCGTGGGAGTAATCGAGCTTTGAAAATCGGTTCAGGGG
TGTGTGATGTCTTATGCAACCTACGATACTCATAGCCGTGCATGCCGTAC
AGTAGTAGTCGTGGGGCGTACCTGTGTTTTTGCCTGCCTTAGCCCTGAAG
ACCATGTTTTTTCATGCCTGAGCGGCTAGACCATTGACCGCGCGTCCTCG
AGAGGACGGAGCAATAATCTTGGCGTGGGGAGCGGTTCTTGTTTGCGTCG
TCGAGAAAGGGCTTGTAGACCGTGTTTTGGGAGTGGGTGTCCTGGGTACG
TACGGCGAGTGCGGCCGGCGCTTGGGGGGCCGTAGCCGCACGGCCGGGCG
TAGGGGTGGGATGGAGGCGGTAGGGGGAAACAGGCGAAGGAGATGTGTTT
TGGGCGATGCGACGAGGGACTGGTACGAGGCAGGGGGGGGGGGGGGGGGG
GGAGGGTACTCATAGTCGTGCATGCCGTAGTCGTTAGACCGTTGACCTCG
CATCCCTACGAAGCCGGGACGGAGCACGCCGGGTTCTCACCGGACCAGGC
CACATGACCAAGCGCGAAGAGCCGCGAGGTATTCGGCGAGAGGCCGGGTA
GGGGGGGGAGGCTATCAAAGTCCTACCGATGGATCCACGCGTCCGCTTGT
TCTGAGTTGTCTCTCGGTCGATTTTGTTATATTCTGTCAAACGCATGGTG
CTTCCACCACTGCCACTGCAACCGCCTCCGCGCGCGCTTCGCTTCTCTCC
TCCCCTCCGATCCCCGGTTGGACAAGGTGGTGACGAAGTACAAACTGTCG
GCGGGTTTGACGGACGTGCTGTGCCGACGTCACGCCTTCATCTGCAGGCG
GAGCTCCGCCAGCGCACTCGATGTTCAGGTGCCCAATAGAATGGCGGTCG
TGGGGAGCGGCCCTTTTGAGAGCGTCGTCCAGAGTACCGTATTGTTCTGT
TTTTTTCTGTCTCCTTTTGTTGTACGAGGAGAGATGTGGATGTTTCTGCA
GTGACTTTCGCGAGAATTAGCAAGAGAAAGAAAAAGGAAAGAGATAAAAA
GAGAGATTCTTGTGGTTACTGCATTGGAGGGAAGACACCCATGTTACTGA
CTTCGATCCAGTGTAGCGCTCAAATTTTTTGGTTGTTGACACTATTAATA
CTGATTTACGGTGGAAACCACAAATGGATGTGGCGTTACATCGTTCGGGT
TTGGCTCGCTTTTGTCTTGGTGCGGACTCGAGACCATTGTCACACCACAC
GGCGAAGACCAAAGTTCCCCCACCGCCCCGCCCCCCGTTGACACTAGCCT
CGTCCATAGCACGGAGTATTTTCGTTCCAGTTGGAATTCCCCCCGCTTTG
TTGTAGTTTTCTCCGAATACATATGCGTAGCATCGGTGGCGCATACGGCT
TCGTGTGTTTGCGTTTTGAGCAGCGCCAATAGCGGGCAGACTGATGACAA
CGCAGAGGACGCTAGCCTTGTGACAGATTCAATAACACGAACACACGCTT
TTCATGGGTAATACTCGCTTTTTTTTTAGTGTGCCCCCCCGCCCCCCGTG
TGAACAATGCTCCGTCCTCTCCAAGACGGGTGGTCAATGGTCTAACCGCT
AAGGCATGCAAAACATAAAAGAGTACGCCCCCCATCCCCACCCCGACGCA
GGAATGGCTGTCTTCCGTGGGTTACCTCTTCCCAGAGACCCTGGCGCGTC
GGGTGTTCCAGTACTTCGCGCAGTCGGGGGGGCTGGCGTGGACGGTGGCG
GACCTTCTCCGATTCCTGTGCTCGTGGGTGCTGGACTCGCGGCAGGAGCA
CGTGTCCATGATGTTCCAGGTGAGGAGAGAGAGAGAGAGGAGCCGGGGGG
AGGGTAATATGGGAGGGTGGGGGTCAGGGTGGACGGGGGAGATTTTTGTG
CGGAAGTTCCGGTTGCTGTATTATTCGTGCATGTTTGTTATTCGCGGCCT
TTGGCTGCTGTTGCTTGAGGTGGTGGTGGTGGTGTAGTTGTTGGTAATAA
TGATGTTGTATATCGCGGCAGTAGTTGGCTTATCGCAATCACGCATTTTG
GCCTTTTTACGGCCCCTCTTTGTTCAAGATGAGCGTCACACCATATTTTG
TGTCCCTTGTTTGCTTGCCAAGGGGCGACACATTCGCTTCGCTCCTGTTA
TACCCATCCCTCTCCCCCCGGTTCCCGACGCTCTCCTGCGGCAAAACATC
GCCCCGTTGAAAACAAATACCCGGCGGGTTAACAAAAAACATCGAAAACA
TACGACGCTGAAGCTGTTTGACGTGGACCGTGACGGGCTGCTTTCGGAGC
GTGAGGTGGCGCAAATGCTCGAGCACCTGGCCGTGTACCACGCACACAGA
GCCAGTGGCGGCGGCGGTGGTTCTCACGCACATCAGGCTGGCCATCACCA
CCGGGGACAGCACAGGTACTCTGTAGATTATAGCAGGTGGTATCATGGGA
TCTAGACAAACGTTTTTCCTCCGTTGCCGCTGTTAGTAATCTGCTCACCT
CTGAAAAGGAGCGCAGTGTCAGTGAGTGTACATGGAGAGACGGCGTCCAG
CCTGCAGTTACCGCTACGAGTTTGGACCATCACATCACATCGGAGTTAAC
GGTTTTTGAGCAAAGTGTATGATCATGATGCCAGTATTCCTTGGTGCTCT
CTGGGTGAAGATTCAGCTCTTGATGCCACCCGCATCTCACTTGTCGGCTC
TTGGAGCGCACCCTCCCTCCCCCTTTTCTATGTCGCGTGCCACTGCTGTA
AAACCGTGGGCCGAATATCGCCCGGAGTGTGAAATAGCCTTGCATGCGTT
TAGCATGTTAAGGTTTGCCCGCAATGTGAAATCACCAGATGTCGTGTCTG
TACGAGTGCGTTGTATTATTATAGCAGGTTCCACCACCACCACCATCGTC
ACAAATGCCGTTTTCCCCGTTGCGTCTCCGATGCCTGTGCTCTTCTTTTG
TCGCTCACAGACATCACCACCTCAGCCACCACCACCACCACGCGGACATG
GCCAGCCTAACCCTCGGCCTCCGCAAGCTGGGCTACGAAGACTTGGAGAG
CCTGGTCCTTATCGACAAGCAGTACGGCGCCGACGCTGCCGCGGCGGCGA
TTACCACCGGCGGCGGTAGCGACGGCGGCGGTAGCGGGGGCGTTCGAGAT
AGCACCGATGGGACCACCCGAGCGGTCGCCCGGAAGCTCTTGCGAGACAT
GCGGGCAACCTCGGAGAGATACGTCGTCGTTCCCCCGGCTTTCTCAGCGT
CGTCTCCCGCGACTTCAACGGCATCTCCTCTTTCCCAGCAACCTCCCGCC
CCTCCCATTCCACGTCTCCCGCAGCAGCAGCACCAGCAACGGAATCGGCA
GGGGCCTGTGGCGGGTGGGGGTGGAGGTGCGGCCGTGAACGATGCCGGCG
GCCCTGCGAGCGAGAAGGGGGGGGGGCTCCGCGGCGGGAGCGGGGTCGTT
GGGGGGGGGGGGCTGACCTTGGCGGGGTTCATGGCGTGGTCGAGCGTGCA
CGGGGGCAGGCTGATGCTGGTAAAGGACCTGGTGTACGCGTGCCTGGCGG
AGTTCGGGATGCGGCCGGCCAAGGCCGTGCAGGAGAGGGAGGTCATCCAC
GAGATTTTCAGAAGGTGTGTGGTTGTGTGTGGTTGTGGTTTGTGCGCGAG
GCGGCACGGAACCAGACGCGTCGTTACGCTTCGGACGTCGGGCGTGATTG
TGAGCGTCCCCCTCCCTCTTTTTTGTCCCACCCCCCGGACGAATCGAATC
GATTAGCTAGCTCACAGAGGCGACGACCGGAGGCTACTCGCCGCAGCAAT
CTAGAGGCTATCAAAGTGTCCACGCCCTTTCTCCCTCCTTCTCTATCTCT
CTCTCCCTGTCTCTCCCTCCCGCTCTGCCCCTCCCTGTCTCCCCCCCTCT
CTCTGCCCCTCCCTCCCTCCCTGTCTAACTATGTTTGGCCGTTTCTTGCT
GCTGCTGCTGCTGAACAGACACGACGTTGCTCTGGACGACGGGGAGGGTG
AGGGGCTCCCTTACGGTCCGGTAGGGACCACGTGGGCGGTGATCAACGCG
CTGTGGTGGGCACAGTGGAGAGACTACGTCCGCATCGGCTTCGACGCTAC
CATGGTGAGAGAGAGAAGAGAACGCTTGGTGGGGGGCGAGAGTGGGGGGG
ACATGGTGTTGTTTGGCCGTCGCAGGTATTGGGGTGTCCGTGTGAAACGC
TCTATCGATGCACACGCACGTATGTGTATCCTTCCCTTGTTTTTTTTTTT
GACACAGATTTGATTTTTGAGTCACTGAGCCTGTGTGTTCGTCGAAGGCA
AGCCTGCACCACACGCTCTTGTTGAAAGGTTGTTAGTCATAATTTGGTGC
AAGCACGTGCTTTGTTGTTGGGCTCAAGGATTAGAGGCAATCCCATCCAT
TATCCATTGTGCCTCCAATCGCGGAGGTGCATGGTGAGGCGAGCATGAGC
GCTACGACTGTACTGTGCACACACACGTGCGACAACGGTTTAAGTAGCGC
TGACAAGCCTGCTTTCGCCCTCCCGCCGCCAACGGTTTAAGTAGCGCTAA
CAAGCCTGCTTTCGCCCTCCCGCCGCCACCACCGCCAACCGTCCCGCCCG
TCTACCCGCCCTGTCGTCTGACGCTAACCGCCGACGTTCCCAATCCGTGT
AGCCCCGAGGGAGCCTGAGCCGCGTCAGCAGCAATAGCAGCATCGCGTCG
AACGGCGGCGGTGGAAGCAGCAGTGGTCGCCAAGGGCCTCCGGCCACCGT
CGCGGGGGGAGGGGTCAGAAGCGGAACCGTTCCCAATGGCAGGGCCTCCG
GCGGGGGCGTTGGCGGCGACTCTTCCGGGCTCAACCGTCCTTCCCCTCCC
CCGCCTTCTTCGATAGGGCCGACGATGACGCCGAGGTCGAGGGCGAGCTC
GCGCGTCTTTGGCTCCGCCCCCGTTCTGGGCGGCAGGGGGCACCGCGTCG
GCAGCGGGGGCGGCGGCGGGGGGGAAGGCGGGGGGCAAGGTGCGGTAGGG
GGGGGGGTGGGGGCTAACGGCGGCGGCGGGGGGGGCGGGGCGTACTTGGC
ATCGTCGTCCTCGTTCGCCACGCAGCAGACGCCGAGGCCGGGGCAGATTC
ACAACGGGGCCTTGCTTGAGCACGGGGGGTCGCGACGCATCGTCCGTGCG
GCGAGACTCGGGCCTGACTTCGCGGTGAGTTTAAGAAAGGGCCGAGAGAC
CTAGCGGCAGTATCGCTATTTAGCGCTGCTGCATTAGGAGACATACATGC
CTTGGAAGGGGTCAAGAAGCGGTTGGTAAGGGGCGGGTGTCATGCTGGAA
AAAATCAGGGGGAAAAGTAGGCGATGCGATAGAGATGCCTTCGTTTCGGT
CGGAATGGTAGAGGAGTCGGACTTGTGCACGCCATATTCCTGCGAAATCC
ACCAGCCGACGTGGGGGGCGGAGGAGGAGGGGGGGGGGGGGGGCACCCTT
GCATGCTCCATGCTGTGCTCGCGTCTTGCACCGCAAAGAAAGCATTCTGA
GTAACCCCGGGGGACTTCGCGCGCGAGCTTGCGTGCACAGTTTGGGATGG
GATGAGGCGGTTCACTACCCCCCCCGCCCCCCTCCCTGATACCACTACGC
ACGTGTACCCAGAGAAACTCATCCCCACCGCACACTAAATGTGTTTTTGT
CTCTCGTTTTATGGGGCGTGCTGGTGGTGATGACAACGGCGCGTGGAATC
GGGGGCGAGCAGATTATCCCTCCGAAAGCGTGGGACGCGTTGCAGTCGTG
GTACGAAGGGGGGCCCGTGTTGGAGCGGCGGGTGATCGACTACCACGGGA
CCCCTCAGCTGGAGCTCTTCCCG back to topCoding sequence (CDS) from alignment at Ecto-sp8_S_contig9187:3..6925- >mRNA_Ecto-sp8_S_contig9187.30538.1 ID=mRNA_Ecto-sp8_S_contig9187.30538.1|Name=mRNA_Ecto-sp8_S_contig9187.30538.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2019bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9187:3..6925- (Ectocarpus species8 EcLAC_412)
CAGGTGTACGACATCCGACGGGCCACGTTCATCGAGATCGACCACGTCCG
GCGCCTCCTGGACCATATCTACGGCTCGGCGCACTCCGAAACCGTCGACC
AGGCGCTGGCCTGGCTCTTCCGCGTGTCGAGCCGCGAGGACGAGATGGAC
GCTGACGAGTTCATCGCGCGGCTCACCCCTGTCGTCGACTTCCGGGGCAC
GGCGGCGGCCGCGCAGGCCGAGCCCCTCCTGCAGTGGTTCCGTGTCCTGT
GCACCCGTATCCTGGAGGAGCCGCACCGGGCGGTGGTGGCGCTGGAGCAG
AGGTACAACCCGGAGAGGGACCTGAACAAGGTGGTGACGAAGTACAAACT
GTCGGCGGGTTTGACGGACGTGCTGTGCCGACGTCACGCCTTCATCTGCA
GGCGGAGCTCCGCCAGCGCACTCGATGTTCAGGAATGGCTGTCTTCCGTG
GGTTACCTCTTCCCAGAGACCCTGGCGCGTCGGGTGTTCCAGTACTTCGC
GCAGTCGGGGGGGCTGGCGTGGACGGTGGCGGACCTTCTCCGATTCCTGT
GCTCGTGGGTGCTGGACTCGCGGCAGGAGCACGTGTCCATGATGTTCCAG
GGGCGACACATTCGCTTCGCTCCTGTTATACCCATCCCTCTCCCCCCGGT
TCCCGACGCTCTCCTGCGGCAAAACATCGCCCCGTTGAAAACAAATACCC
GGCGGGTTAACAAAAAACATCGAAAACATACGACGCTGAAGCTGTTTGAC
GTGGACCGTGACGGGCTGCTTTCGGAGCGTGAGGTGGCGCAAATGCTCGA
GCACCTGGCCGTGTACCACGCACACAGAGCCAGTGGCGGCGGCGGTGGTT
CTCACGCACATCAGGCTGGCCATCACCACCGGGGACAGCACAGACATCAC
CACCTCAGCCACCACCACCACCACGCGGACATGGCCAGCCTAACCCTCGG
CCTCCGCAAGCTGGGCTACGAAGACTTGGAGAGCCTGGTCCTTATCGACA
AGCAGTACGGCGCCGACGCTGCCGCGGCGGCGATTACCACCGGCGGCGGT
AGCGACGGCGGCGGTAGCGGGGGCGTTCGAGATAGCACCGATGGGACCAC
CCGAGCGGTCGCCCGGAAGCTCTTGCGAGACATGCGGGCAACCTCGGAGA
GATACGTCGTCGACCTGGTGTACGCGTGCCTGGCGGAGTTCGGGATGCGG
CCGGCCAAGGCCGTGCAGGAGAGGGAGGTCATCCACGAGATTTTCAGAAG
ACACGACGTTGCTCTGGACGACGGGGAGGGTGAGGGGCTCCCTTACGGTC
CGGTAGGGACCACGTGGGCGGTGATCAACGCGCTGTGGTGGGCACAGTGG
AGAGACTACGTCCGCATCGGCTTCGACGCTACCATGCCCCGAGGGAGCCT
GAGCCGCGTCAGCAGCAATAGCAGCATCGCGTCGAACGGCGGCGGTGGAA
GCAGCAGTGGTCGCCAAGGGCCTCCGGCCACCGTCGCGGGGGGAGGGGTC
AGAAGCGGAACCGTTCCCAATGGCAGGGCCTCCGGCGGGGGCGTTGGCGG
CGACTCTTCCGGGCTCAACCGTCCTTCCCCTCCCCCGCCTTCTTCGATAG
GGCCGACGATGACGCCGAGGTCGAGGGCGAGCTCGCGCGTCTTTGGCTCC
GCCCCCGTTCTGGGCGGCAGGGGGCACCGCGTCGGCAGCGGGGGCGGCGG
CGGGGGGGAAGGCGGGGGGCAAGGTGCGGTAGGGGGGGGGGTGGGGGCTA
ACGGCGGCGGCGGGGGGGGCGGGGCGTACTTGGCATCGTCGTCCTCGTTC
GCCACGCAGCAGACGCCGAGGCCGGGGCAGATTCACAACGGGGCCTTGCT
TGAGCACGGGGGGTCGCGACGCATCGTCCGTGCGGCGAGACTCGGGCCTG
ACTTCGCGATTATCCCTCCGAAAGCGTGGGACGCGTTGCAGTCGTGGTAC
GAAGGGGGGCCCGTGTTGGAGCGGCGGGTGATCGACTACCACGGGACCCC
TCAGCTGGAGCTCTTCCCG back to top
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