mRNA_Ecto-sp8_S_contig9157.30496.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9157.30496.1
Unique NamemRNA_Ecto-sp8_S_contig9157.30496.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9157.30496.1 vs. uniprot
Match: D7FLD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD9_ECTSI)

HSP 1 Score: 556 bits (1434), Expect = 6.020e-195
Identity = 298/315 (94.60%), Postives = 299/315 (94.92%), Query Frame = 1 
Query:  280 MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLXXXXXXXXXXXXXXXVGETEWKEEGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAGPTPSPHY 1224
            MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRL               VGET WKE+GSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAGPTPSPHY
Sbjct:    1 MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGETVWKEDGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAGPTPSPHY 315
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BLAST of mRNA_Ecto-sp8_S_contig9157.30496.1 vs. uniprot
Match: A0A836CBZ9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ9_9STRA)

HSP 1 Score: 303 bits (776), Expect = 1.820e-95
Identity = 178/323 (55.11%), Postives = 214/323 (66.25%), Query Frame = 1 
Query:  280 MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSRE---GEKVYM--------RLXXXXXXXXXXXXXXXVGETEWKEEGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAGPTPS 1215
            M+ + L  I+T H+  IHDAQLDYY +KLATASSD  I IF++ G+   N+   L+GH+GPVWQV WAHP+FGVLLASCSYD SV+IH E+PPG W+ VH H LH   XXXXXXXXXXXXXXXXXXXXXXXX          W  +  QD KLGCN+VSWAP+ S G ++   G  V          R+                G+  W +E  +H S P H+DWVRDVAWAPATGMP N +ASC ED+ V IWTQ +    W   +M  F APVWR+SWS+TGNVLAVS GD DV+LWKQN+EG WE +S+V EE G  P+
Sbjct:    1 MSVSTLVNIETQHNEMIHDAQLDYYSRKLATASSDRTIEIFDINGEVT-NRSAVLTGHEGPVWQVAWAHPRFGVLLASCSYDGSVLIHTESPPGVWTTVHAHRLHXXXXXXXXXXXXXXXXXXXXXXXXXXXSILQHMDDDSWQVSTFQDGKLGCNAVSWAPYGSGGGKDDAMGRDVMRLVTGSCDNRVRVWKCPAPTAGEVLGQGQLVWTDE-LTH-SEPAHTDWVRDVAWAPATGMPFNTIASCGEDKAVYIWTQQEGGTEWTLTKMHEFSAPVWRLSWSVTGNVLAVSHGDDDVTLWKQNIEGRWEMVSSV-EEGGRGPN 319
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BLAST of mRNA_Ecto-sp8_S_contig9157.30496.1 vs. uniprot
Match: K3XB55_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3XB55_GLOUD)

HSP 1 Score: 290 bits (743), Expect = 1.050e-90
Identity = 168/306 (54.90%), Postives = 207/306 (67.65%), Query Frame = 1 
Query:  286 TTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLXXXXXXXXXXXXXXXVGETEWKEEGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAG 1203
            T  + +IDT H   IHDAQLDYYGK+LAT SSD  + +++V G+  +N+   L+GH+GPVWQV WAHPKFG LLASCSYD  VII+RE     W+  + H      XXXXXXXXXXXXXXXXXXXXXXX           W  +  +DS LGCN+VSWAPFN+LGS+       R+                G+TEW +E  S  S+P HSDWVRD AWAP+TGMP N++ASCSED+ V IW+Q++ +GPW    + TF APVWRVSWS+TGNVLAVSSGD  V+LWK+ L+  W  IS+V +EAG
Sbjct:    2 TAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTVKVYDVTGEVQNNE-QLLTGHEGPVWQVAWAHPKFGALLASCSYDGKVIIYREQSLNQWAQTYVHAFXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVISYSTEG-WSVSHFKDSSLGCNAVSWAPFNALGSKGETGPIRRIVTASCDKTIKIWSLAEGQTEWTKEDIS--SAPAHSDWVRDAAWAPSTGMPVNLIASCSEDKHVYIWSQTEENGPWKRELLHTFEAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSV-DEAG 302
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BLAST of mRNA_Ecto-sp8_S_contig9157.30496.1 vs. uniprot
Match: D0NKZ1_PHYIT (Protein transport protein SEC13 n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NKZ1_PHYIT)

HSP 1 Score: 288 bits (736), Expect = 1.210e-89
Identity = 169/303 (55.78%), Postives = 205/303 (67.66%), Query Frame = 1 
Query:  295 LQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLXXXXXXXXXXXXXXXVGETEWKEEGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAG 1203
            + +IDT H   IHDAQLDYYGK+LAT SSD  I +++V GD  +N+   L+GH+GPVWQV WAHPKFGVLLA+CSYD  VII+RE     W+  + H  H S XXXXXXXXXXXXXXXXXXXXXXX           W  +  +DS LGCN+VSWAPFNS+GS+       R+                GETEW ++  S  S P HSDWVRDVAWAP+TG+P N++ASCSED+ V IW+Q+     W    + TF APVWRVSWS+TGNVLAVSSGD  V+LWK+ L+  W  IS+V +EAG
Sbjct:    5 ILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVAGDVQNNE-QILTGHEGPVWQVSWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYVHAFHDSXXXXXXXXXXXXXXXXXXXXXXXXVSVLSYSPEG-WSVSHFKDSALGCNAVSWAPFNSVGSQGPSGPIRRVMTASCDKTIKIWSLPEGETEWTKQELS--SVPAHSDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQTAEDSSWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSV-DEAG 302
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9157.30496.1 vs. uniprot
Match: H3GAW1_PHYRM (Uncharacterized protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=H3GAW1_PHYRM)

HSP 1 Score: 284 bits (726), Expect = 3.760e-88
Identity = 167/303 (55.12%), Postives = 204/303 (67.33%), Query Frame = 1 
Query:  295 LQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLXXXXXXXXXXXXXXXVGETEWKEEGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAG 1203
            + +IDT H   IHDAQLDYYGK+LAT SSD  I +++V GD  +N+   L+GH+GPVWQV WAHPKFGVLLA+CSYD  VII+RE     W+  + H  H   XXXXXXXXXXXXXXXXXXXXXXX           W  +  +DS LGCN+VSWAPFNS+GS+       R+                GETEW ++  S  S+P H DWVRDVAWAP+TG+P N++ASCSED+ V IW+Q+     W    + TF APVWRVSWS+TGNVLAVSSGD  V+LWK+ L+  W  IS+V +EAG
Sbjct:    5 ILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVTGDVQNNE-QILTGHEGPVWQVAWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYMHGFHXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLSYSPEG-WSVSHFKDSALGCNAVSWAPFNSVGSQGPTGPIRRVVTASCDKTIKIWSLQEGETEWTKQELS--SAPAHGDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQTAEDTVWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSV-DEAG 302
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BLAST of mRNA_Ecto-sp8_S_contig9157.30496.1 vs. uniprot
Match: A0A7S2UZ04_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ04_9STRA)

HSP 1 Score: 283 bits (725), Expect = 1.220e-87
Identity = 183/324 (56.48%), Postives = 214/324 (66.05%), Query Frame = 1 
Query:  280 MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLXXXXXXXXXXXXXXXVGETEWKEEGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGP-----------------WAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEA 1200
            MA     TIDT H   IHDAQ DYY KK+AT SSD  I I++V GD + N+   L+GHDGPVWQV WAHPKFGVLLASCSYD  VIIHRE+P   W+ +H H  H S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       QDS LGCN++SWAP+N++GS + E+  + +                 E  W+EE    D    HSDWVRDVAWAP++GMPCN+VAS SED  V IW Q++ SG                  W    +  F APVWRVSWS+TGNVLAVSSGD  V+LWKQ+L+G W  +S+V EEA
Sbjct:    1 MAADQPVTIDTQHEDMIHDAQFDYYAKKVATCSSDRTIQIYDVTGDVY-NKSAVLTGHDGPVWQVAWAHPKFGVLLASCSYDGQVIIHRESPQSCWTQIHVHRFHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHFQDSPLGCNAISWAPYNAIGS-QNERGAVEMRVVTGSCDNKVRFWRSTERGWEEEAKQADV---HSDWVRDVAWAPSSGMPCNLVASGSEDGQVHIWQQTETSGAPTSGGGAASSPASGQAVWQPHLVHNFGAPVWRVSWSVTGNVLAVSSGDHMVTLWKQSLDGTWFQVSSVKEEA 319
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BLAST of mRNA_Ecto-sp8_S_contig9157.30496.1 vs. uniprot
Match: A0A3M6VUN6_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VUN6_9STRA)

HSP 1 Score: 283 bits (725), Expect = 6.330e-85
Identity = 167/303 (55.12%), Postives = 204/303 (67.33%), Query Frame = 1 
Query:  295 LQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLXXXXXXXXXXXXXXXVGETEWKEEGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAG 1203
            + +IDT H   IHDAQLDYYGK+LAT SSD  I +++V GD  +N+   L+GH+GPVWQV WAHPKFGVLLA+CSYD  VII+RE     W+  + H +    XXXXXXXXXXXXXXXXXXXXXXX           W  +  +DS LGCN+VSWAPFNS+GS+       R+                GE EW ++  S  S+P HSDWVRDVAWAP+TG+P N++ASCSED+ V IW+QS     W    + TF APVWRVSWS+TGNVLAVSSGD  V+LWK+ L+  W  IS+V +EAG
Sbjct:    5 ILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVTGDVQNNE-QILTGHEGPVWQVSWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYVHAIXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLSYSPEG-WSVSHFKDSALGCNAVSWAPFNSVGSQSPAGPIRRVVTASCDKTIKIWSLTEGEKEWTKQELS--SAPAHSDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQSAEDSAWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSV-DEAG 302
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9157.30496.1 vs. uniprot
Match: A0A2D4BZT8_PYTIN (Protein transport protein SEC13 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZT8_PYTIN)

HSP 1 Score: 285 bits (728), Expect = 1.690e-83
Identity = 170/312 (54.49%), Postives = 200/312 (64.10%), Query Frame = 1 
Query:  286 TTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLXXXXXXXXXXXXXXXVGETEWKEEGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAW-----ECISTVPEEAGP 1206
            T  + +IDT H   IHDAQLDYYGK+LAT SSD  I +++V GD  +N+   LSGH+GPVWQV WAHPKFGVLLASCSYD  VII +E     W+  + H      XXXXXXXXXXXXXXXXXXXXXXXX          W  +  +DS LGC +VSWAPFNSLGS+       R+                G TEW ++  S  S+P H DWVRD AWAP TGMP NI+ASCSED+ V IWTQS+ +GPW    +  F APVWRVSWS+TGNVLAVSSGD  V+LWK+ L+  W       I+  P   GP
Sbjct:  136 TAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVTGDVQNNE-QILSGHEGPVWQVSWAHPKFGVLLASCSYDGKVIIFKEQSLNQWTQAYVHAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLSYTAEG-WVVSHFKDSSLGCXAVSWAPFNSLGSKNEAGPIKRVVTASCDKTIKIWSLPEGHTEWTKQEIS--SAPAHVDWVRDAAWAPGTGMPVNIIASCSEDKHVYIWTQSEENGPWKRELLHVFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIPWVPRSIAAPPTRTGP 443
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9157.30496.1 vs. uniprot
Match: A0A7R9ZAI8_9STRA (Hypothetical protein n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9ZAI8_9STRA)

HSP 1 Score: 258 bits (658), Expect = 2.210e-77
Identity = 148/309 (47.90%), Postives = 191/309 (61.81%), Query Frame = 1 
Query:  304 IDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHE-LHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAP---FNSLGSREGEKVYMR----LXXXXXXXXXXXXXXXVGETEWKEEGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGP-WAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAG 1203
            +DT H   +HDAQLDYYG KLAT+SSD  I I++V G+S  +   +L GH+GPVW+V W+HPKFG++LASCS+D SV+IHRE+ P  W+ +H    LH SS         XXXXXXXXXXXXXX           W   +I+D+ LG N+VSWAP   FN  G+ EGE V       +                   +W+EE  +    P H+DWVRDVAWAPA     ++VASCSED+ V++WT++   G  W    +  F APVWR+SWS+TG+VLAVSSGDS V+LWK  L+G W  +S V + AG
Sbjct:   39 VDTQHDDMVHDAQLDYYGCKLATSSSDRTIKIYDVSGNSFAHTA-TLQGHEGPVWEVSWSHPKFGIVLASCSFDGSVLIHRESRPREWTLLHAARGLHDSSVNGVAFAPHXXXXXXXXXXXXXXVSVLTHNEDDTWGVEYIRDNSLGVNAVSWAPYAPFNEAGAGEGEGVAAAPQPTVVTGGCDNRIRFWTRSAQNGQWEEEPGALGPGPAHTDWVRDVAWAPAIIPGVDVVASCSEDKTVIVWTRTGGRGSSWEPKLLHAFEAPVWRLSWSVTGSVLAVSSGDSSVTLWKAGLDGVWRRVSHVEDVAG 346
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9157.30496.1 vs. uniprot
Match: A0A7S2JUM7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JUM7_9STRA)

HSP 1 Score: 254 bits (650), Expect = 1.630e-76
Identity = 154/309 (49.84%), Postives = 198/309 (64.08%), Query Frame = 1 
Query:  280 MATT-ALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPP-GTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLXXXXXXXXXXXXXXXVGETEWKEEG-SSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGP-WAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPE 1194
            +ATT A  +IDT H   +HDAQLDYYG KLAT SSD  + ++ V  D   +   +L+GH+GPV+++ WAHPKFG +LAS S+D SV++HRE  P G+W+ VH H +H   XXXXXXXXXXXXXXXXXXXXXX            W  TF QD+ LG NSVS+AP + + + +  K  MRL                    W+++   S  +   H+DWVRDVAWAP T    N VASCSED+ V+IWTQS+     W    + TF APVWRVSWS+TG +LAVSSGDSDV++WKQ L+G W  +++V +
Sbjct:   19 VATTPAPVSIDTQHDDMVHDAQLDYYGVKLATCSSDRTVKVYSVAKDQEVSHTATLTGHEGPVYEIAWAHPKFGSILASSSFDGSVLLHREVQPMGSWTLVHAHRMHXXXXXXXXXXXXXXXXXXXXXXXXXKVSVITHREDDSWDATFFQDNMLGVNSVSFAPCSFMSASDDAKDGMRLVVGGCDNKVRFWKLNAETKTWEQDDFDSSKADVTHTDWVRDVAWAP-TVSSFNTVASCSEDKTVIIWTQSEDDRTEWKPVLLHTFDAPVWRVSWSVTGTILAVSSGDSDVTMWKQELDGKWSQVASVED 326
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9157.30496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLD9_ECTSI6.020e-19594.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CBZ9_9STRA1.820e-9555.11WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
K3XB55_GLOUD1.050e-9054.90Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
D0NKZ1_PHYIT1.210e-8955.78Protein transport protein SEC13 n=16 Tax=Peronospo... [more]
H3GAW1_PHYRM3.760e-8855.12Uncharacterized protein n=7 Tax=Peronosporaceae Ta... [more]
A0A7S2UZ04_9STRA1.220e-8756.48Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A3M6VUN6_9STRA6.330e-8555.12Uncharacterized protein n=3 Tax=Peronosporaceae Ta... [more]
A0A2D4BZT8_PYTIN1.690e-8354.49Protein transport protein SEC13 n=1 Tax=Pythium in... [more]
A0A7R9ZAI8_9STRA2.210e-7747.90Hypothetical protein n=3 Tax=Odontellaceae TaxID=2... [more]
A0A7S2JUM7_9STRA1.630e-7649.84Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9157contigEcto-sp8_S_contig9157:2872..5648 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score552.7
Seed ortholog evalue1.1e-154
Seed eggNOG ortholog2880.D7FLD9
Preferred nameSEC13
Model size1711
KEGG koko:K14004
KEGG Pathwayko03013,ko04141,ko04150,map03013,map04141,map04150
KEGG ModuleM00404,M00427
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000323,GO:0000785,GO:0000819,GO:0002164,GO:0002165,GO:0002168,GO:0002376,GO:0002474,GO:0002478,GO:0002495,GO:0002504,GO:0003002,GO:0003674,GO:0003682,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005694,GO:0005700,GO:0005703,GO:0005730,GO:0005737,GO:0005764,GO:0005765,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005798,GO:0005829,GO:0006323,GO:0006355,GO:0006357,GO:0006508,GO:0006511,GO:0006606,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006913,GO:0006950,GO:0006996,GO:0006997,GO:0007049,GO:0007059,GO:0007076,GO:0007275,GO:0007346,GO:0007389,GO:0007591,GO:0008104,GO:0008150,GO:0008152,GO:0008363,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009792,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010973,GO:0012505,GO:0012506,GO:0012507,GO:0014070,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0017038,GO:0019219,GO:0019222,GO:0019538,GO:0019882,GO:0019884,GO:0019886,GO:0019941,GO:0022402,GO:0022607,GO:0023051,GO:0023056,GO:0030117,GO:0030120,GO:0030127,GO:0030133,GO:0030134,GO:0030135,GO:0030163,GO:0030261,GO:0030433,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031080,GO:0031081,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0031410,GO:0031503,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031984,GO:0032006,GO:0032008,GO:0032465,GO:0032467,GO:0032501,GO:0032502,GO:0032870,GO:0032954,GO:0032955,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0033993,GO:0034504,GO:0034605,GO:0034613,GO:0034622,GO:0034629,GO:0034976,GO:0035017,GO:0035075,GO:0035077,GO:0035079,GO:0035293,GO:0035459,GO:0035859,GO:0036314,GO:0036315,GO:0036503,GO:0040003,GO:0042175,GO:0042221,GO:0042303,GO:0042335,GO:0042337,GO:0042802,GO:0042886,GO:0043085,GO:0043087,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043547,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045787,GO:0045893,GO:0045931,GO:0045935,GO:0045944,GO:0046907,GO:0048002,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048285,GO:0048475,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051276,GO:0051302,GO:0051336,GO:0051345,GO:0051603,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051664,GO:0051668,GO:0051716,GO:0051726,GO:0051781,GO:0060255,GO:0060260,GO:0060261,GO:0061024,GO:0061700,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0071103,GO:0071310,GO:0071390,GO:0071396,GO:0071407,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072594,GO:0080090,GO:0090068,GO:0090110,GO:0090114,GO:0097305,GO:0097306,GO:0097708,GO:0098588,GO:0098687,GO:0098796,GO:0098805,GO:0098813,GO:0098827,GO:0098852,GO:0140014,GO:1901564,GO:1901565,GO:1901575,GO:1901654,GO:1901655,GO:1901698,GO:1901700,GO:1901701,GO:1901891,GO:1901893,GO:1902412,GO:1902531,GO:1902533,GO:1902680,GO:1903047,GO:1903432,GO:1903436,GO:1903438,GO:1903490,GO:1903506,GO:1903508,GO:1904263,GO:1990893,GO:2000112,GO:2000142,GO:2000144,GO:2001141
Exons3
EggNOG free text desc.positive regulation of TORC1 signaling
EggNOG OGsKOG1332@1,KOG1332@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-12_007790.1
Cds size948
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145265.8957424-UTR-Ecto-sp8_S_contig9157:2871..33551681145265.8957424-UTR-Ecto-sp8_S_contig9157:2871..3355Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9157 2872..3355 -
1681145265.9462175-UTR-Ecto-sp8_S_contig9157:5369..56481681145265.9462175-UTR-Ecto-sp8_S_contig9157:5369..5648Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9157 5370..5648 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145265.9102292-CDS-Ecto-sp8_S_contig9157:3355..37251681145265.9102292-CDS-Ecto-sp8_S_contig9157:3355..3725Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9157 3356..3725 -
1681145265.9229207-CDS-Ecto-sp8_S_contig9157:4305..45511681145265.9229207-CDS-Ecto-sp8_S_contig9157:4305..4551Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9157 4306..4551 -
1681145265.935167-CDS-Ecto-sp8_S_contig9157:5037..53691681145265.935167-CDS-Ecto-sp8_S_contig9157:5037..5369Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9157 5038..5369 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9157.30496.1prot_Ecto-sp8_S_contig9157.30496.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9157 3356..5369 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9157.30496.1

>prot_Ecto-sp8_S_contig9157.30496.1 ID=prot_Ecto-sp8_S_contig9157.30496.1|Name=mRNA_Ecto-sp8_S_contig9157.30496.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=316bp
MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHN
QLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVH
KHELHTSSVNSIAWAPHELGLMLACASSDGRVSILQHQPNDEWHTTFIQD
SKLGCNSVSWAPFNSLGSREGEKVYMRXXXXXXXXXXXXXXXXVGETEWK
EEGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQAS
GPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECI
STVPEEAGPTPSPHY*
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mRNA from alignment at Ecto-sp8_S_contig9157:2872..5648-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9157.30496.1 ID=mRNA_Ecto-sp8_S_contig9157.30496.1|Name=mRNA_Ecto-sp8_S_contig9157.30496.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2777bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9157:2872..5648- (Ectocarpus species8 EcLAC_412)
TGAGCACCTGTGAGTACAGCACGGAGTACCGAACAGCGAACCGAAGGGAG
ACAAGAAGGGGAGAGGAGGCACAGAGCCAACGACGACCGGCTGCCTTGCT
AGCGCACGTACACCTGCTGTTTTTGGAAATTGCTCCGTCTGTGCAAACGC
CTGGTACCTTAGTCTGCCGTGTCTAGTGGTGGAGGTATACGCTTGGGTGT
GTTCGAGGGTGCTGCTATCAGTCTCTCGTGTGAACATCCACATCTTAGGT
GCGGAGAATAGACACGGGGCAACCGCAGCATGGCTACGACCGCCCTGCAA
ACGATAGACACACATCACAGCGGTAACATCCACGACGCGCAGCTGGACTA
CTATGGCAAGAAGCTCGCTACCGCGTCAAGTGATTGCAAGATCAACATCT
TCGAGGTTGTCGGGGACAGCCACCACAACCAACTCGACTCTCTCTCCGGG
CACGACGGTCCGGTTTGGCAAGTCGGATGGGCACACCCGAAGTTTGGCGT
GCTCCTGGCTTCCTGCTCCTACGATAAATCCGTCATCATCCACCGGGAGA
CGCCGCCGGGAACCTGGAGCCCGGTGCACAAGCACGAACTCCATACGTCC
AGTGTAAACAGGTGCGGATAGCTAACTTTGAACGCGAACGGTGGTTTCTC
CCGGTATTCGAAACGTCTCCCACTCTCTGAAACTAAAACATCATTCGCAT
GCCGGACTAACAGACATCCTGGTACCTGGTACTTCCTACTTGCTGTAGCG
CGTTGTGCTCGATCCCAAAATACTACATTCGAGTGGTGGTTGCGGTTCTG
AAGCAGTAACATGACGCAGGTCACGCAGTAGCGGTTTGTGTCGGTTGCCC
CGTGGCCCGTCCCACATCCATCGTATTTCACCCCGAGTCTCCAGATCAAA
TGCATACATACTCCCCCCCACCGAGCGGTTTGCCCAGCGTTGCGCCCATT
ATGGTCCTTGCATATGTTTGCCAGATTGTAGTGCACTATACTAGAGTGAG
TTGGCCCCCAAAGGCGTTCAAGTGGCAAATTGAAAAATGAAATCCACACC
CTATACCACTTGACGCCCTGCGCTATCCTGTACTTGCTGCTGTACAGCAT
TGCATGGGCGCCCCATGAGCTAGGCTTGATGCTCGCCTGCGCTTCGAGTG
ACGGCCGCGTGAGCATTCTTCAGCACCAGCCGAACGACGAGTGGCATACC
ACATTCATCCAAGATTCCAAGCTTGGCTGTAACTCTGTGAGCTGGGCGCC
TTTTAACAGCTTGGGATCGAGGGAGGGCGAGAAAGTGTACATGCGGCTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAGTAGGGGAGACGGAGTGGAAAGAAGA
GGGGAGCTCCCATGACTCCTCCCCCCGGCACTCGGACTGGGTGCGAGACG
TGGCCTGGGCGCCCGCGACGGGCATGCCGTGCAATATCGTCGCCAGCTGT
TCGGAGGACAGAGGTGTGGTCATCTGGACGCAGTCGCAAGCCTCGGGACC
CTGGGCAGCGGCTGAAATGAAGACCTTCCCGGCGCCGGTGTGGCGTGTTT
CTTGGTCGATCACCGGAAACGTTCTCGCCGTGTCGTCGGGTGACAGCGAT
GTGTCGCTCTGGAAGCAGAACCTGGAGGGCGCGTGGGAGTGTATTTCTAC
GGTGCCGGAGGAGGCAGGTCCCACACCTTCGCCTCACTACTGAAAAAAAT
AAGTCTACATTTTTGGTTGTGCTGTAGGGCTCTTTTGCTGCATGAAAGTT
GTAAAAGTAGTATGAGAGCATGAAACCAGTGCGGTTCAGGTTTTTGTCCA
GTTCGTGCCTTTTCTCCGATTCAAGGTTATGGCCGTCATTATGGCTATAG
ATGTCAGCGTCGCACGGGCCCGGGGGTGTTGCTACAGCAAGCAGTAGTCA
GTCCTGAGGCACTCCATTGGAGTATCTCGTGCATCGGGCATAATTTACGG
TAAACAGCTGTCGTAACCTTGCTTGGTTTTGGACATGGACATGCCACATG
ACCCAAAATCCCGGTACCAGCACTCATTGAGAGGCTCCATGACCACCCTG
TCAGCAGCGGACACGCAAACGTGTGCACACAATTCGCAGGTATATTTGCC
ACAATCCAAAGCAGAGCAGGGACCATTTAGTTCTTCCGCCAATAGTTGTT
ACAACACCACGGACTTCTACACCAACG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9157:2872..5648-

>mRNA_Ecto-sp8_S_contig9157.30496.1 ID=mRNA_Ecto-sp8_S_contig9157.30496.1|Name=mRNA_Ecto-sp8_S_contig9157.30496.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9157:2872..5648- (Ectocarpus species8 EcLAC_412)
ATGGCTACGACCGCCCTGCAAACGATAGACACACATCACAGCGGTAACAT
CCACGACGCGCAGCTGGACTACTATGGCAAGAAGCTCGCTACCGCGTCAA
GTGATTGCAAGATCAACATCTTCGAGGTTGTCGGGGACAGCCACCACAAC
CAACTCGACTCTCTCTCCGGGCACGACGGTCCGGTTTGGCAAGTCGGATG
GGCACACCCGAAGTTTGGCGTGCTCCTGGCTTCCTGCTCCTACGATAAAT
CCGTCATCATCCACCGGGAGACGCCGCCGGGAACCTGGAGCCCGGTGCAC
AAGCACGAACTCCATACGTCCAGTGTAAACAGCATTGCATGGGCGCCCCA
TGAGCTAGGCTTGATGCTCGCCTGCGCTTCGAGTGACGGCCGCGTGAGCA
TTCTTCAGCACCAGCCGAACGACGAGTGGCATACCACATTCATCCAAGAT
TCCAAGCTTGGCTGTAACTCTGTGAGCTGGGCGCCTTTTAACAGCTTGGG
ATCGAGGGAGGGCGAGAAAGTGTACATGCGGCTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTAGGGGAGACGGAGTGGAAA
GAAGAGGGGAGCTCCCATGACTCCTCCCCCCGGCACTCGGACTGGGTGCG
AGACGTGGCCTGGGCGCCCGCGACGGGCATGCCGTGCAATATCGTCGCCA
GCTGTTCGGAGGACAGAGGTGTGGTCATCTGGACGCAGTCGCAAGCCTCG
GGACCCTGGGCAGCGGCTGAAATGAAGACCTTCCCGGCGCCGGTGTGGCG
TGTTTCTTGGTCGATCACCGGAAACGTTCTCGCCGTGTCGTCGGGTGACA
GCGATGTGTCGCTCTGGAAGCAGAACCTGGAGGGCGCGTGGGAGTGTATT
TCTACGGTGCCGGAGGAGGCAGGTCCCACACCTTCGCCTCACTACTGA
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