mRNA_Ecto-sp8_S_contig9134.30455.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9134.30455.1
Unique NamemRNA_Ecto-sp8_S_contig9134.30455.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9134.30455.1 vs. uniprot
Match: D8LBQ0_ECTSI (Peroxisomal enoyl-coenzyme A hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBQ0_ECTSI)

HSP 1 Score: 570 bits (1470), Expect = 1.290e-203
Identity = 322/333 (96.70%), Postives = 324/333 (97.30%), Query Frame = 1 
Query:   61 MYDGFETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXX--AGGKPRAVXXXXXXAEVSPRRSQRAEVVAASILTASEIARQSPVAVYGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAAAGNPKRSSRREAGAGAEAGSHPHFSKL 1053
            MYDGFETL VSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACD+RLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXX  AGGKPRAVXXXXXX     RRSQRAEVVAASILTASEIARQSPVAV+GTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAAAGNPKRS RREAGAGAEAGSHPHFSKL
Sbjct:    1 MYDGFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDIRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAAAGNPKRSGRREAGAGAEAGSHPHFSKL 333
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9134.30455.1 vs. uniprot
Match: A0A6P8I096_ACTTE (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I096_ACTTE)

HSP 1 Score: 258 bits (659), Expect = 1.040e-80
Identity = 147/300 (49.00%), Postives = 185/300 (61.67%), Query Frame = 1 
Query:   73 FETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTN-FDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXAGGKPRAVXXXXXXAEVSPRRSQRAEVVAASILTASEIARQSPVAVYGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRA 969
            +ETL VS PA +VL V++NRP KRNAMN  FW E  +CF  I+ D+D R VVV+G G  F+AGLDL D    F   G    D AR+A   RK+ L+ QESF+ +E+CP+PVIAAIH AC+GG VDL CACD+RLCS DA F + EV +GLAADVGTLQR+PKIVGN+SL REL+YT R   A EA   G VS +    E+                                       +++A+   AS+IA +SPVAV GTK NL Y+RDHSV +GL Y ATW+ + LQ  D+  A++A
Sbjct:   50 YETLAVSQPADHVLRVELNRPEKRNAMNQAFWREMVECFNKITNDSDCRXVVVTGAGKIFTAGLDLMDMAGVFMQAGPENADAARKAAELRKIILSYQESFSVIEKCPKPVIAAIHSACIGGGVDLVCACDIRLCSSDAWFQIKEVDIGLAADVGTLQRLPKIVGNDSLVRELSYTARRLPANEAKEAGLVSHIYPDKES---------------------------------------LISAATAMASKIASKSPVAVMGTKHNLNYSRDHSVEEGLNYMATWNMSMLQTEDIMKAVQA 310
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9134.30455.1 vs. uniprot
Match: A0A835YKC1_9STRA (Peroxisomal enoyl-coenzyme A hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC1_9STRA)

HSP 1 Score: 254 bits (648), Expect = 2.090e-79
Identity = 154/329 (46.81%), Postives = 198/329 (60.18%), Query Frame = 1 
Query:   64 YDGFETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSD----TTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXAGGKPRAVXXXXXXAEVSPRRSQRAEVVAASILTASEIARQSPVAVYGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAAAGNPKRSSRREAGAGAEAGSHP 1038
            Y GFETL V     +VLHV++NRP++ NAMNA++W E R  F  I+ D +VRAVV+SG G HFSAG+D+      T N  +      DVAR A + ++L L+MQESFT + RCPQPVIAAIHGAC+GGAVDL  ACD+R CS+ A F V EV VGL ADVGTLQR+P++VGN+S  R++ Y+ RTFGAAEA   G VS+V                   +GG                    R  ++AA++  A+ IA  SP+AV GTKR+L +++DHSV DGL + A W+ AAL   DL    R          RR+ GA AE  + P
Sbjct:    5 YVGFETLAVRVAVPHVLHVELNRPNRANAMNAQYWHEMRRLFAAIAVDPEVRAVVISGAGKHFSAGIDMQPGQQPTGNLLSGPGKNSDVARHALKLQQLVLSMQESFTCITRCPQPVIAAIHGACMGGAVDLITACDMRFCSDCALFSVKEVAVGLCADVGTLQRLPRVVGNQSWVRDICYSARTFGAAEAKEFGLVSKVC------------------SGG--------------------REGILAAAMEAAAVIAAHSPLAVTGTKRSLEWSQDHSVADGLAHVALWNSAALMTKDLMIGARPP-------DRRKGGAAAEGTTKP 288
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9134.30455.1 vs. uniprot
Match: A0A2B4RA31_STYPI (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RA31_STYPI)

HSP 1 Score: 251 bits (642), Expect = 3.780e-78
Identity = 142/298 (47.65%), Postives = 188/298 (63.09%), Query Frame = 1 
Query:   73 FETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXAGGKPRAVXXXXXXAEVSPRRSQRAEVVAASILTASEIARQSPVAVYGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMR 966
            FETL V+ P  +V+ V++NRP KRNAMN  FW E  DCF+ I++DAD RAVV++G G  F+AGLDL D  +   +  +  + +RRA   RKL L +Q+SF  +E+CPQPVIAA H ACVGG VD+ C+CD+RLCS DA F + E+ +GLAAD+GTLQ+ PKI+GN+SL REL +TGR F A EA + GFVSRV                                    SP R     +V  ++  A +IA++SPVA+ GTK NL ++RDHS  +GLEY ATW+ A LQ  D+  A++
Sbjct:   53 FETLAVTKPLDHVIQVELNRPDKRNAMNGTFWREMVDCFRQIADDADCRAVVLTGAGKIFTAGLDLMDMGS--NLMSSDLEPSRRAHLLRKLILFLQDSFRTIEKCPQPVIAAFHSACVGGGVDMICSCDIRLCSSDAWFQIKEIDIGLAADLGTLQKFPKIIGNDSLARELCFTGRRFTAEEALQFGFVSRV------------------------------------SPGRDS---LVKEALELAGQIAKKSPVAMAGTKHNLNFSRDHSAQEGLEYMATWNMAMLQTEDILKAVQ 309
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9134.30455.1 vs. uniprot
Match: V4BYT3_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BYT3_LOTGI)

HSP 1 Score: 250 bits (639), Expect = 6.100e-78
Identity = 141/298 (47.32%), Postives = 182/298 (61.07%), Query Frame = 1 
Query:   70 GFETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXAGGKPRAVXXXXXXAEVSPRRSQRAEVVAASILTASEIARQSPVAVYGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAM 963
             FETL V+ P  +VL V+INRP KRNAMN  FW E  +CF  IS+D+D RAV+ +G G  F+AGLDL D  N  A  ++  DV R+A + RKL  + QESFTA+E+CP+PVIA +H ACVGG +DL  ACD+R  S DA FCV EV +GLAADVGTLQR+PKI+GN+S+ RELAYT R F A EA ++G + R+                                          +  ++  ++ TAS IA +SP+AV GTK  L+YARDH V +GL+   TW+   LQ+ DL  AM
Sbjct:   34 NFETLKVTQPREFVLQVEINRPEKRNAMNQAFWREMVECFNQISDDSDCRAVIFTGSGKIFTAGLDLMDMDN--AFMQSDLDVGRKAMKLRKLIRSYQESFTAIEKCPKPVIACVHSACVGGGIDLIAACDMRYSSSDAWFCVKEVDIGLAADVGTLQRLPKIIGNDSIARELAYTARKFFADEAKQIGLIGRIF---------------------------------------ENKETMIQGALDTASLIASKSPIAVQGTKVCLVYARDHGVSEGLDQMVTWNQNMLQSEDLMKAM 290
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9134.30455.1 vs. uniprot
Match: UPI00109BEF07 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BEF07)

HSP 1 Score: 249 bits (637), Expect = 1.470e-77
Identity = 145/301 (48.17%), Postives = 185/301 (61.46%), Query Frame = 1 
Query:   73 FETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTN--FDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXAGGKPRAVXXXXXXAEVSPRRSQRAEVVAASILTASEIARQSPVAVYGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRA 969
            FETL VS P++ V  V++NRP KRNAMN  FW E R+CF  IS DAD RAVV++G G  F+AGLDL +       + G   +D++R+A + R + L  QESFT +++C +PVIAAIH ACVGG VD+ CACD+RLCS DA F V EV++GLAADVGTLQR+PKI+GNESL REL YT R F A EA   G VS +                                          R  +V+A++  AS IA+ SPVAV GTK NL Y+RDH V + L Y ATW+ + LQ+ D+  A++A
Sbjct:   38 FETLAVSQPSQNVFQVELNRPEKRNAMNQVFWREMRECFSKISSDADCRAVVLTGAGKIFTAGLDLMEMAGVLMQSTG-GDQDISRKAAKLRDVVLQYQESFTVIDKCSKPVIAAIHSACVGGGVDMICACDIRLCSADAWFQVKEVELGLAADVGTLQRLPKIIGNESLVRELCYTARRFLAHEAKDAGLVSHIY---------------------------------------PDRESLVSAALNMASTIAKMSPVAVMGTKHNLNYSRDHGVDEALNYIATWNMSMLQSEDILKAVQA 298
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9134.30455.1 vs. uniprot
Match: A0A7D9IU21_PARCT (Delta(3,5)-Delta(2,4)-dienoyl- isomerase, mitochondrial n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IU21_PARCT)

HSP 1 Score: 249 bits (635), Expect = 3.230e-77
Identity = 143/299 (47.83%), Postives = 179/299 (59.87%), Query Frame = 1 
Query:   73 FETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXAGGKPRAVXXXXXXAEVSPRRSQRAEVVAASILTASEIARQSPVAVYGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRA 969
            FETL V+ P  +V  V INRP KRNAMN  FW E   CF  I+ D + RAVV+SG G  F+AGLDL D  +     +  +DV+RRA+  RK  L  QESF+ +E+CPQPVIAAIH ACVGG VD+ CACD+R C+ DA F V EV++GLAADVGTLQR+PKIVGNESL REL YT R   + EA   G VSR+                                          R  ++ +++  AS IA+ SPVAV GTK NL Y+RDH V + LEY A+W+ + LQ  D+  A++A
Sbjct:   42 FETLEVTKPRDHVFQVNINRPEKRNAMNQTFWSEMVTCFNKIATDTECRAVVLSGAGKIFTAGLDLMDMASVIMSQQDDQDVSRRAYNMRKTILQFQESFSVIEKCPQPVIAAIHSACVGGGVDMICACDIRWCTSDAWFQVKEVELGLAADVGTLQRLPKIVGNESLVRELCYTSRKLMSEEAKSFGLVSRIF---------------------------------------QDRESLIDSALDLASHIAKMSPVAVSGTKHNLNYSRDHPVDESLEYIASWNMSMLQTDDILKAVQA 301
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9134.30455.1 vs. uniprot
Match: A0A8B6EPU1_MYTGA (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase n=3 Tax=Mytilus TaxID=6548 RepID=A0A8B6EPU1_MYTGA)

HSP 1 Score: 247 bits (631), Expect = 1.040e-76
Identity = 140/296 (47.30%), Postives = 182/296 (61.49%), Query Frame = 1 
Query:   64 YDGFETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXAGGKPRAVXXXXXXAEVSPRRSQRAEVVAASILTASEIARQSPVAVYGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDL 951
            YD FETL VS P   V HV++NRP + NAMN  FW ECR+CFQ ++ D + R ++VSG G  F+AGLDL D  +    G   KDVAR  F+ R      QESFT++E+CP+PVIAA+HG CVGG VDL  ACD+R C++DA F + E+ VGL ADVGTLQR+PKI+GN+SL REL YT R F + EA  +GFVSR+                                          +A ++ A+I  AS IA +SPVAV GTK +++Y+RDHSV +GL + A W+ A LQ+ D+
Sbjct:   36 YD-FETLKVSSPREDVAHVELNRPDRLNAMNIAFWRECRECFQKLAIDKNYRVIIVSGAGRLFTAGLDLMDMGDVMPTG---KDVARNCFKMRPKIEEYQESFTSIEKCPKPVIAAVHGGCVGGGVDLTSACDIRYCTQDAWFQIKEIDVGLTADVGTLQRLPKIIGNDSLARELCYTARKFHSDEAKEIGFVSRIF---------------------------------------PDKAAMINAAIELASLIASKSPVAVQGTKVSMVYSRDHSVPEGLAHIALWNQAMLQSEDV 288
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9134.30455.1 vs. uniprot
Match: UPI001CF3EB97 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3EB97)

HSP 1 Score: 248 bits (632), Expect = 1.210e-76
Identity = 136/300 (45.33%), Postives = 189/300 (63.00%), Query Frame = 1 
Query:   70 GFETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXAGGKPRAVXXXXXXAEVSPRRSQRAEVVAASILTASEIARQSPVAVYGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRA 969
             FETL VS P  +V+HV++NRP KRNAMN  FW E  +CF+ I++D++ RAVV++G G  F+AGLDL +      +  + +D +RRAF  RK  L++Q+SF  +E CPQPVIAA+H  C+GG +D+ C+CD+RLCS DA F V E+ +GLAAD+GTLQ+ PKIVGN+SL REL YTGR+F + EA  +GFVSR+                                        S R  +V  ++  A+EI+++SPVA+ G K NL + R+HS   G+EY ATW+ A LQ+ D+  A++A
Sbjct:   52 SFETLAVSKPHEHVIHVELNRPEKRNAMNKAFWREMVECFKQIADDSNCRAVVLTGAGKIFTAGLDLREMGG--DLMNSGQDPSRRAFYLRKFILSLQKSFQVIEECPQPVIAAVHSGCLGGGIDMICSCDIRLCSADAWFQVKEIDLGLAADLGTLQKFPKIVGNDSLARELCYTGRSFTSQEALNLGFVSRMC---------------------------------------SDRESLVKEAVELATEISKKSPVAMAGIKHNLNFTREHSPKAGMEYMATWNMAMLQSEDILKAVQA 310
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9134.30455.1 vs. uniprot
Match: A0A2T7NWL4_POMCA (Uncharacterized protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NWL4_POMCA)

HSP 1 Score: 246 bits (628), Expect = 1.380e-76
Identity = 142/304 (46.71%), Postives = 185/304 (60.86%), Query Frame = 1 
Query:   73 FETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSD-----TTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXAGGKPRAVXXXXXXAEVSPRRSQRAEVVAASILTASEIARQSPVAVYGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRA 969
            F+TL V+ P  YV++V++NRP KRNAMN+  W E R CF  ++ DAD RAVV+SG G  F+AGLDL+D     TT  DA      DV R+AF  R+     QESFT +E+CP+PVIAA+H AC+G  +D+  ACD+R CS DA F + EV +GLAADVGTLQR PK++GN+SL RELA T R F A EA  MGFVSR+                                     P + Q   ++  ++  AS IA +SP+AV GTK +++YARDHSV D LE+  TW+ A LQ+ D+  A+ A
Sbjct:   12 FKTLKVTRPREYVVNVELNRPEKRNAMNSDLWSEIRACFLQLATDADCRAVVLSGAGKMFTAGLDLTDAILQETTMSDA------DVGRKAFSLRRNIALFQESFTVIEKCPKPVIAAVHSACLGAGIDMISACDIRYCSSDAWFTIKEVDLGLAADVGTLQRFPKVIGNDSLARELALTARNFFADEAKEMGFVSRIF------------------------------------PDKEQ---LIEGALDLASTIASKSPIAVQGTKISMVYARDHSVADSLEHVLTWNQAMLQSEDVKNAIMA 270
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9134.30455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBQ0_ECTSI1.290e-20396.70Peroxisomal enoyl-coenzyme A hydratase n=2 Tax=Ect... [more]
A0A6P8I096_ACTTE1.040e-8049.00delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A835YKC1_9STRA2.090e-7946.81Peroxisomal enoyl-coenzyme A hydratase n=1 Tax=Tri... [more]
A0A2B4RA31_STYPI3.780e-7847.65Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
V4BYT3_LOTGI6.100e-7847.32Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
UPI00109BEF071.470e-7748.17delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A7D9IU21_PARCT3.230e-7747.83Delta(3,5)-Delta(2,4)-dienoyl- isomerase, mitochon... [more]
A0A8B6EPU1_MYTGA1.040e-7647.30Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase n=3 Ta... [more]
UPI001CF3EB971.210e-7645.33delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A2T7NWL4_POMCA1.380e-7646.71Uncharacterized protein n=2 Tax=Pomacea canalicula... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9134contigEcto-sp8_S_contig9134:2136..5735 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score577.8
Seed ortholog evalue3.3e-162
Seed eggNOG ortholog2880.D8LBQ0
Preferred nameECH1
Model size1072
KEGG koko:K12663
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0016042,GO:0016043,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0031907,GO:0031974,GO:0032787,GO:0033036,GO:0033365,GO:0034440,GO:0034613,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051750,GO:0055114,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:1901575
Exons4
EggNOG free text desc.delta3,5-delta2,4-dienoyl-CoA isomerase activity
EggNOG OGsKOG1681@1,KOG1681@2759
Ec32 ortholog descriptionperoxisomal enoyl-coenzyme A hydratase
Ec32 orthologEc-27_003160.1
Cds size996
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9134.30455.1prot_Ecto-sp8_S_contig9134.30455.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9134 2152..5675 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145263.0593278-UTR-Ecto-sp8_S_contig9134:2135..21511681145263.0593278-UTR-Ecto-sp8_S_contig9134:2135..2151Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9134 2136..2151 -
1681145263.1269038-UTR-Ecto-sp8_S_contig9134:5675..57351681145263.1269038-UTR-Ecto-sp8_S_contig9134:5675..5735Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9134 5676..5735 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145263.0746722-CDS-Ecto-sp8_S_contig9134:2151..26521681145263.0746722-CDS-Ecto-sp8_S_contig9134:2151..2652Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9134 2152..2652 -
1681145263.0874085-CDS-Ecto-sp8_S_contig9134:3089..32811681145263.0874085-CDS-Ecto-sp8_S_contig9134:3089..3281Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9134 3090..3281 -
1681145263.1013014-CDS-Ecto-sp8_S_contig9134:4503..46251681145263.1013014-CDS-Ecto-sp8_S_contig9134:4503..4625Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9134 4504..4625 -
1681145263.1165762-CDS-Ecto-sp8_S_contig9134:5494..56751681145263.1165762-CDS-Ecto-sp8_S_contig9134:5494..5675Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9134 5495..5675 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9134.30455.1

>prot_Ecto-sp8_S_contig9134.30455.1 ID=prot_Ecto-sp8_S_contig9134.30455.1|Name=mRNA_Ecto-sp8_S_contig9134.30455.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=332bp
MYDGFETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDA
DVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAM
QESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVK
VGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAA
PEAATVAAAAAAAAATAGGKPRAVAASAASAEVSPRRSQRAEVVAASILT
ASEIARQSPVAVYGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTA
MRAAAGNPKRSSRREAGAGAEAGSHPHFSKL*
back to top

mRNA from alignment at Ecto-sp8_S_contig9134:2136..5735-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9134.30455.1 ID=mRNA_Ecto-sp8_S_contig9134.30455.1|Name=mRNA_Ecto-sp8_S_contig9134.30455.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3600bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9134:2136..5735- (Ectocarpus species8 EcLAC_412)
GGCCGATCCGTGATTACACAGCACTGACTGCTGCTCCCACCTTCACCTTC
CTACACCATTATGTACGATGGTTTTGAGACGCTCCTCGTGTCTTTCCCGG
CACGATACGTTCTGCACGTACAGATAAATCGGCCGAGCAAGAGGAATGCC
ATGAACGCAAAGTTTTGGATCGAGTGTCGGGATTGCTTCCAGCTCATCTC
GGAGGATGCCGACGTGCGGGCGGTTGTGGTGTCTGGGATGGGTGAGTTGC
TGAGATTCGATGAGCATCACAAGGCTGAGCTAGCAACATCATGTTACATG
TCGCTTTTGTTGTCATGAACTTGGGGCTTGCAAGAAGAGAATTGCCTCTG
CCATTTTGCCGCAGTTCCGCCGCAGCACATGATGTGGCAGCGTTGCCGCA
CCCCTTTTTTACAGCTGCGTCAAGAAGCGTCAGCCTCGATGTCTGCATGT
CGCACTCACTACTTTAGGCAGCCACCTGCTGCTTTGCAATTTTCAAGGAT
TACAAGCAGTGTGACAATTGCAGCATTGGCGTGGGGCCATTTGGGACACA
CTTCAGATATCAACAGGGCATAGCAGCGGGGGGTTTTGGGCGAACGAGAT
CATGTGTCATGTACCGGACGTGTGCCTCCTCACGACGGCTCCGCAGTCGG
AGCACACAACCGTGATATGAATGTAGCCTTCCATGTAGCGAGAGTGTGCA
CAGAAGTTGGCACTACCTGTACAGCAGTATGTGTTTTGATCCCTGACAAC
TTAGACGAGGGGAGACCCCTTATACATCTATAACGCAGTGTCACTTTCTG
GTCCGCCGCGATCGGAGGTCTGCACTGGCATGAACAGGGCGGGTGCCTGC
CGGTTATTTGCGGCGATTACCAGGGGGTGAAAGGCCGGAAGGCCGCGGTG
AATATACCTTACACAAAGCCCTCACATTTATCACCATAAATTCGAAAAAG
CAAAACACAACCAAACGATCACGGCAACAACAACGTCATACCCGCGACTC
TTGTAGCTCTCGTCGTGCGTACCTTCTTCGCCTTCACCACAAACTAACAG
ACGCGACACAACAAACCCCGTTCCTTTGGCTTCCCGTCCTCTTCTTGAAT
CGCCCAACAGGCGACCACTTTTCCGCGGGATTGGACCTGTCCGACACGAC
AAACTTCGATGCCATCGGAAGGGCCACGAAGGACGTCGCTCGTCGAGCGT
TTCGTTTCCGAAAGCTTGCTTTGGCGATGCAGGTACGTACGTGGTTTTGG
ATTGGTTCGGACGTGCGTCGGCTCGAGTATGTACGTGCTTTTTTTTGTTG
CCTCGAACGGCCTTCGTCAAACGTTGCCCCCTCCTCTCACCATTTTAGCC
TTTTTGTGACAATTTGTGAGAGGTATACACCCACAGCATTCAAGTCGTTT
GGAGAATATGATCATATACATATGCGTAGCTTTAGACAGAGAGAAGGCGA
TGTCCGCGTCTGCCACAGAAAAGGGGCCTTGCTTTTTCTTCGCACATGGA
TGGGTGGACTTTCCGTTTTCATGTCTACAGCAGTACCACAATATGGGTTT
TCATTGCGAGCGCCGACGTTCGATTTTCCTTCCAAGGGGTGGGGCCGAGA
AGGTAGTGAGTAGAGGTGAATACGTTTTGTCTTTTGCCAGACCACATCAA
CAGTTCATGGACAATATCGACTCACTTGTTTCCGAGATAAATTTTCTGCC
TTGTACAAATGAAGGCGCGAAGGGTTGTTGTATCAACAAACCGCTGTGGT
ATTTTATTGTTTGTTCAGGCGCCCCCTTTGTCTAGGCAACGGCAGGCAAT
ATCCTTGCCGGCAGTGGGCAAGCCAGAAAGCAAAATTACTCCTTATCCGA
ACGCTGCTACTGCTGCCTTCCGTGGCCAAGAAAGTATGGTACCCGAGCCC
GCGTTACTCACAAGCCATTCTTGGGGTGCATCTTGCCGTGCGTGTATTTG
CCGAGCGAGCTGAAAACTCCCACTACAACAATTATGCCGTCGCGCTTGGC
AAGATGCCTGCTACCTTTCTTTTCGACAGACGACATCCACTGCTCTGCCA
TGGCTTTGTAAGAGGGTGCGGTTAGTGCTCCGTCTCGGAGATGGAAGTGC
GCGATCTGAAGGCACTGTCTCCAACATTTAAAGACGTGGACGTAAACAGC
AAGCGCCACGTTGTAGATTTGATCCCCCCCCCCCCCCCCCCCTGCCTTCT
TCAATTTCCACGGTGGTATCAATGTAAGTAAGAATGTGCTAACCCTCCTT
TTCGAGAGGGATAGCACAGGTGGTCCTTGGTCGATGGTTAAACACCCTCC
TAAGGCAAGCAACAAGCAGGCCGCCCCCGCGACGTCACCCTTGCCTCATA
CTTCTACAACGCAACAAAAGTGAAGTACCCCGCTCCACTCCGTTCCGCGT
CTCCCCACCACCACCGTCAATCCAACCAACCAACGTTGCCCGACCGAAAC
TCAGGAGTCGTTCACGGCCGTGGAGCGGTGCCCCCAGCCCGTGATCGCGG
CGATCCACGGGGCGTGCGTCGGAGGAGCGGTGGACTTGGCTTGCGCCTGC
GACGTTAGGCTCTGTTCCGAGGACGCGGGATTCTGCGTCGCTGAGGTCAA
GGTCGGCCTAGCGGCGGACGTGGGGACGCTACAACGAATGCCCAAGGTGC
CCCTCTTGACTTTGTCAGCTGCACCATTTTGTTTTGTGCTGTTTTCATGT
ACTTTTTCGTGCCTGCATTTCCAGAGCTCAACATGTGTATGCGTGTCCAA
GACCACATTTATACACGTTTTCAAGGGACCGTATACTGCAACGAATACAC
TGTGCCTAAGGCCAACGAGACAGATGTTTTTGTTGCCATCGCTTGTCTCC
TTCGGTCTGCTGGCGGGACTGCCTGTCGGGGGCTCATCGATTGACCGAAA
CAACAGAACAATGAAAGAAACGTCATCGAGAACGCCAACACCAATAACAC
CGACAGCACCGACAACAATCTTCACACACACACACAAACACAACACACCA
CCACCACCACCACCACCACCACCCTTGCCTGAAAGCTGAAACGCTAACGT
CATATCACAACTGACTAAATAATAACACCGCAGATAGTGGGCAACGAGTC
GCTGTGCAGAGAGCTCGCCTACACTGGACGGACGTTCGGAGCGGCCGAGG
CATCACGCATGGGGTTTGTCTCCCGTGTCGTCGCTGCCCCCGAAGCAGCA
ACCGTTGCCGCCGCCGCCGCAGCCGCAGCTGCCACGGCAGGTGGTAAACC
ACGTGCCGTGGCGGCGTCGGCGGCGTCGGCAGAAGTATCACCCCGTCGCT
CCCAACGAGCAGAAGTCGTCGCCGCCTCGATTCTGACGGCCTCGGAGATA
GCCAGGCAAAGCCCCGTTGCCGTGTATGGCACCAAGCGTAACCTCCTCTA
CGCGCGGGACCACAGCGTCGTTGATGGGTTGGAGTATGCGGCGACGTGGA
GCGGGGCGGCACTCCAAGCCGGGGATTTGAGCACGGCCATGCGTGCGGCG
GCTGGAAATCCGAAACGAAGTAGTAGGAGAGAGGCGGGAGCGGGAGCAGA
GGCGGGTTCGCACCCGCATTTTTCGAAATTATAGCGGTCTGCGGCAGGGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9134:2136..5735-

>mRNA_Ecto-sp8_S_contig9134.30455.1 ID=mRNA_Ecto-sp8_S_contig9134.30455.1|Name=mRNA_Ecto-sp8_S_contig9134.30455.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=996bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9134:2136..5735- (Ectocarpus species8 EcLAC_412)
ATGTACGATGGTTTTGAGACGCTCCTCGTGTCTTTCCCGGCACGATACGT
TCTGCACGTACAGATAAATCGGCCGAGCAAGAGGAATGCCATGAACGCAA
AGTTTTGGATCGAGTGTCGGGATTGCTTCCAGCTCATCTCGGAGGATGCC
GACGTGCGGGCGGTTGTGGTGTCTGGGATGGGCGACCACTTTTCCGCGGG
ATTGGACCTGTCCGACACGACAAACTTCGATGCCATCGGAAGGGCCACGA
AGGACGTCGCTCGTCGAGCGTTTCGTTTCCGAAAGCTTGCTTTGGCGATG
CAGGAGTCGTTCACGGCCGTGGAGCGGTGCCCCCAGCCCGTGATCGCGGC
GATCCACGGGGCGTGCGTCGGAGGAGCGGTGGACTTGGCTTGCGCCTGCG
ACGTTAGGCTCTGTTCCGAGGACGCGGGATTCTGCGTCGCTGAGGTCAAG
GTCGGCCTAGCGGCGGACGTGGGGACGCTACAACGAATGCCCAAGATAGT
GGGCAACGAGTCGCTGTGCAGAGAGCTCGCCTACACTGGACGGACGTTCG
GAGCGGCCGAGGCATCACGCATGGGGTTTGTCTCCCGTGTCGTCGCTGCC
CCCGAAGCAGCAACCGTTGCCGCCGCCGCCGCAGCCGCAGCTGCCACGGC
AGGTGGTAAACCACGTGCCGTGGCGGCGTCGGCGGCGTCGGCAGAAGTAT
CACCCCGTCGCTCCCAACGAGCAGAAGTCGTCGCCGCCTCGATTCTGACG
GCCTCGGAGATAGCCAGGCAAAGCCCCGTTGCCGTGTATGGCACCAAGCG
TAACCTCCTCTACGCGCGGGACCACAGCGTCGTTGATGGGTTGGAGTATG
CGGCGACGTGGAGCGGGGCGGCACTCCAAGCCGGGGATTTGAGCACGGCC
ATGCGTGCGGCGGCTGGAAATCCGAAACGAAGTAGTAGGAGAGAGGCGGG
AGCGGGAGCAGAGGCGGGTTCGCACCCGCATTTTTCGAAATTATAG
back to top