mRNA_Ecto-sp8_S_contig913.30442.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig913.30442.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 372 bits (954), Expect = 6.220e-124 Identity = 193/205 (94.15%), Postives = 195/205 (95.12%), Query Frame = 3
Query: 417 MNQHMDIMAILTGAGVRDTMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCSSGSPRIVRLLVDAGADTTSAVRVTNSNGGVEYNDTPLAVTTSFLREKAVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSRGPEPRRPPLSLTLPILKRRAKTRRVCVASLLRHS 1031
MNQHMDIMAILTGAGVRD MGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCSSG+PRIVRLLVDAGADTTS VRVTN NGGVEYNDTPLAVTTS LREK VDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERS GPEPRRPPLSLTLPILKRRAKT V VA+LLR S
Sbjct: 1 MNQHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLRSS 205
BLAST of mRNA_Ecto-sp8_S_contig913.30442.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 282 bits (722), Expect = 3.520e-85 Identity = 181/347 (52.16%), Postives = 208/347 (59.94%), Query Frame = 3
Query: 3 LEVVAGSDGLTPLHAAVRGGDSEAVTVLIEAGANPDSQTPSGVTVGMGFLSLRAVXXXXXXXXXXXXXXXXXXXXXXXXXAASAISTSRSSPYGTTVVPLDIAACAGYSDVVRELVQEVGIEGCDATNAGEQALHLAAMNQHMDIMAILTGAGVRDTMGYVLLGTAGLGREASVQFLLRQRRKESEMSVH-AYANSSDGSGMTPLSCSIEWCSSGSPRIVRLLVDAGADTTSAVRVTNSNGGVEYNDTPLAVTTSFLREKAV-DGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSRGPEPRRPPLSLTLPILKRRAKTRRVCVASLLRHSVK 1037
L+ + +G PLH A NPD Q P G T L + A A+ + S P TT VPLD+AA G++DVVREL+QE+GIEGCDAT+AG AL AA NQH+DIMAILT AGV DT G L AG+G EASV+FLLR R KE V AY N+ D +G TPL + C S +PRIVR+LVDAGADTTS V+V N GGV +NDTPLA T LR+K V DGKPAT+E L RL+AI RLLLRVDAVHAVSWLWPS AP I A E PEP P L L LPILKRR K R VA+LLR+SVK
Sbjct: 199 LDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTA----LHIAAEEGQVAVMRELLRGN------------ANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDT-GKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETD--PEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526
BLAST of mRNA_Ecto-sp8_S_contig913.30442.1 vs. uniprot
Match: D7FVU0_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI) HSP 1 Score: 224 bits (571), Expect = 1.490e-64 Identity = 130/228 (57.02%), Postives = 159/228 (69.74%), Query Frame = 3
Query: 246 ASAISTSRSSPYGTTVVPLDIAACAGYSDVVRELVQEVGIEGCDATNAGEQALHLAAMNQHMDIMAILTGAGVRDTMGYVLLGTAGLGREASVQFLLRQRRKESEMSV-HAYANSSDGSGMTPLSCSIEWCSSGSPRIVRLLVDAGADTTSAVRVTNSNGGVEYNDTPLAVTTSFLREKAVD-GKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVER 923
A I S G VPLD+AA +G+S VVR LVQE+GI+GC+ NAG+QAL LAA + +D +AILTGAG DT G L+ A EAS + LRQR KE + V +A N SG+T L SI+ C S +PRIVRLL++AGADTTS +R TNS G V+ N TPLA+TTS+L EK +D G+PATEE L RL+AIRRLLLR +AVHAVSWLWPSDA + HA E+
Sbjct: 155 APCICIQPPSSSGFPGVPLDVAASSGHSGVVRHLVQELGIKGCNPENAGKQALLLAASKRDLDTLAILTGAGAVDTSGSALMCAA----EASFKHFLRQRLKEEKGGVEYASINDRISSGLTALVFSIQRCLSQTPRIVRLLINAGADTTSVIRGTNSEGEVQCNGTPLALTTSYLWEKILDNGEPATEEHLQRLEAIRRLLLRAEAVHAVSWLWPSDASFVGHAAEK 378
BLAST of mRNA_Ecto-sp8_S_contig913.30442.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 210 bits (535), Expect = 9.630e-59 Identity = 131/271 (48.34%), Postives = 175/271 (64.58%), Query Frame = 3
Query: 246 ASAISTSRSSPYGTTVVPLDIAACAGYSDVVRELVQEVGIEGCDATNAGEQALHLAAMNQHMDIMAILTGAGVRDTMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCSSGSPRIVRLLVDAGADTTSAVRVTNSNGGVEYNDTPLAVTTSFLREKA--VDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSRGPEPRRPPLS--LTLPIL--KRRAKTRRVCVASLLRHSVKP 1040
A + T+ P G T +PLD AA G+ +VV EL+++VGI+GC ++ G +AL AA ++++IM ILT AGV DT G L+ AG G E ++FLL Q R M AY N+ D G+TPL I+ PR+VRLLV+AGADTTS V V N GG + + TPL +T + +R+K V PA+ EQLH+L+AIRRLLLRV+AVHAVSWLWPSD +I A R R +S +TLP+L +RRA+ R+V +A+LLR+S KP
Sbjct: 172 ADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDT-GLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYR---PRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTD---RTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435
BLAST of mRNA_Ecto-sp8_S_contig913.30442.1 vs. uniprot
Match: D8LDX5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX5_ECTSI) HSP 1 Score: 197 bits (502), Expect = 5.520e-55 Identity = 149/287 (51.92%), Postives = 177/287 (61.67%), Query Frame = 3
Query: 3 LEVVAGSDGLTPLHAAVRGGDSEAVTVLIEAGANPDSQTPSGVTVGMGFLSLRAVXXXXXXXXXXXXXXXXXXXXXXXXXAASAISTSRSSPYGTTVVPLDIAACAGYSDVVRELVQEVGIEGCDATNAGEQA---LHLAAMNQHMDIMAILTGAGVRDTMGYVLLGTAGLGREASVQFLLRQRRKESEMSV-HAYANSSDGSGMTPLSCSIEWCSSGSPRIVRLLVDAGADTTSAVRVTNSNGGVEYNDTPLAVTTSFLREKAV-DGKPATEEQLHRLQAIRRLLL 848
LEV+ S G TPLH G SE V V+I A ANP+S+ G XXXXXXXXXXXXX ++ +S G T +P+D+A G+SDVVR+LVQ GC NAG QA L AA QH+ IMAILTGAGV D +G LLG A EASV+FLLRQR ES SV ++Y N+SD G TPL+ SI+ C S + RI+RLL DAGAD SAVRVTNSNG EY+ TPLAV TS +REK + +G PATEE L+ L+AI RLLL
Sbjct: 8 LEVMT-SQGSTPLHKDALEGRSEVVGVMIRALANPNSRMLCGAXXXXXXXXXXXXXXXXXXXXXXXXXF---------------LTKKGNSSSGDTAIPMDVAVQNGHSDVVRKLVQW---RGCGVANAGSQACQALFFAASEQHLVIMAILTGAGVVDWVGLSLLGAAESALEASVKFLLRQRYHESTRSVEYSYVNASDTDGWTPLAHSIQRCCSHAARIIRLLFDAGADVASAVRVTNSNGQQEYSGTPLAVVTSCIREKVLANGTPATEEHLYMLEAIGRLLL 275
BLAST of mRNA_Ecto-sp8_S_contig913.30442.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 195 bits (496), Expect = 6.420e-53 Identity = 131/347 (37.75%), Postives = 185/347 (53.31%), Query Frame = 3
Query: 3 LEVVAGSDGLTPLHAAVRGGDSEAVTVLIEAGANPDSQTPSGVTVGMGFLSLRAVXXXXXXXXXXXXXXXXXXXXXXXXXAASAISTSRSSPYGTTVVPLDIAACAGYSDVVRELVQEVGIEGCDATNAGEQALHLAAMNQHMDIMAILTGAGVRDTMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCSSGSPRIVRLLVDAGADTTSAVRVTNSNGGVEYNDTPLAVTTSFLREKAVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSRGPEPRRPPLSLTLPILK--RRAKTRRVCVASLLRHSVK 1037
L+ + TPL A G + +VT L++AG+N +++ G T A + T S +PLD+AA G+ +VV EL+++VGI+GC ++ GE AL AA+ +DIMAILT AGV DT G L+ AG G EA ++FLL Q R AY N+ +G G+T L I+ C PR+V+LLV+AGADTTS V + N G +++ TPL +T L ++ KP T E+ ++L+ IRRLLLR +AVHAVSWLWPSD P+I HA + G + +L RR + R+ +A+LLR+S K
Sbjct: 107 LDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGAT----------------PLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDT-GLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCR---PRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRS--AKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSK 431
BLAST of mRNA_Ecto-sp8_S_contig913.30442.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 189 bits (479), Expect = 9.480e-51 Identity = 123/261 (47.13%), Postives = 159/261 (60.92%), Query Frame = 3
Query: 288 TVVPLDIAACAGYSDVVRELVQEVGIEGCDATNAGEQALHLAAMNQHMDIMAILTGAGVRDTMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCS----SGSPRIVRLLVDAGADTTSAVRVTNSNGGVEYNDTPLAVTTSFLREKAVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDA------PSIVHAVERSRGPEPRRPPLSLTLPILKRRAKTRRVCVASLLRHSVKP 1040
T++PLD AA G V+REL+Q VGIEGC + GE AL +A + + MA+LT AGV DT G L +AGLGREASV++LL+ K AY N D +G TPL SI C S PR+ RLLV+AGADTT+ +R TNS G V ++ TPL +T L++K VDG ++++L RL+ IRRLLL+V+AVHA SWLWPS + P +A E + P L LPIL+RRA+ V +L RH KP
Sbjct: 169 TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDT-GQALTISAGLGREASVKYLLQNHAKH--YGPGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPD--NAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424
BLAST of mRNA_Ecto-sp8_S_contig913.30442.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 177 bits (448), Expect = 3.660e-46 Identity = 102/199 (51.26%), Postives = 126/199 (63.32%), Query Frame = 3
Query: 321 GYSDVVRELVQEVGIEGCDATNAGEQALHLAAMNQHMDIMAILTGAGVRDTMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCSSGSPRIVRLLVDAGADTTSAVRVTNSNGGVEYNDTPLAVTTSFLREKAVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAV 917
G+S+VVREL+Q++G+ GC +AG ++L LAA Q++DIM ILT GV DT G L+ A RE SV+FLL+ + V+ N+ D G TPL C+IE C S SPRI R L+D GADT S V VT S DTPL T LR+ V GK ATEEQL L+AI RLL +++AVHAVSWLW S I HAV
Sbjct: 191 GHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDT-GRALVVAAEYSREESVKFLLQHQAGGGTWYVN---NTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAV 385
BLAST of mRNA_Ecto-sp8_S_contig913.30442.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 175 bits (443), Expect = 9.180e-46 Identity = 113/266 (42.48%), Postives = 151/266 (56.77%), Query Frame = 3
Query: 246 ASAISTSRSSPYGTTVVPLDIAACAGYSDVVRELVQEVGIEGCDATNAGEQALHLAAMNQHMDIMAILTGAGVRDTMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCSSG--SPRIVRLLVDAGADTTSAVRVTNSNGGVEYNDTPLAVTTSFLREKAVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSRGPEPRRPPLSLTLPILKRRAKTRRVCVASLLRHSVK 1037
A+ + T S G + VPL++AA G S VV EL++E GI C + G AL +AA+ +DIM++L AGV D +G LL G G+EA+V FLLRQ+ + + S A DG +T L S + +PRI R LVDAGADTTSAV++ N TPL + + PAT+EQL RL+A RR+LLRV AVHAVSW+WPSDAP + R + L+ LP+L+RRA R + +L R+S K
Sbjct: 142 ANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTSYVNIARDDDG--LTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405
BLAST of mRNA_Ecto-sp8_S_contig913.30442.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 173 bits (438), Expect = 9.100e-45 Identity = 114/263 (43.35%), Postives = 159/263 (60.46%), Query Frame = 3
Query: 273 SPYGTTVVPLDIAACAGYSDVVRELVQEVGIEGCDATNAGEQALHLAAMNQHMDIMAILTGAGVRDTMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSS-DGSGMTPLSCSIEWCSSG--SPRIVRLLVDAGADTTSAVRVTNSNGGVEY-NDTPLAVTTSFLREKAVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPS-DAPSIVHAVERSRGPEPRRP---PLSLTLPILKRRAKTRRVCVASLLRHSVK 1037
+P G + VPL++AA G DV RE++++VGI GC + G +AL AA +H++ MA+L AG G L+ A GR +V+FLLR+R+ +++ AY N + D G TP+ C+++ + SP+IVRLLVDAGA+TT AV VT E ++TPLA TT LRE VDG+ AT+EQL RL+ R LL R +AVHAVSWLW S + P I A ++ PL P+L+R+ TR V + +L R+S K
Sbjct: 177 TPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADAD----AYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig913.30442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig913.30442.1 >prot_Ecto-sp8_S_contig913.30442.1 ID=prot_Ecto-sp8_S_contig913.30442.1|Name=mRNA_Ecto-sp8_S_contig913.30442.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=301bp MGFLSLRAVTPLHVAAAKGRTGALRELLRAKANPAASAISTSRSSPYGTTback to top mRNA from alignment at Ecto-sp8_S_contig913:4910..7649+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig913.30442.1 ID=mRNA_Ecto-sp8_S_contig913.30442.1|Name=mRNA_Ecto-sp8_S_contig913.30442.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2740bp|location=Sequence derived from alignment at Ecto-sp8_S_contig913:4910..7649+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig913:4910..7649+ >mRNA_Ecto-sp8_S_contig913.30442.1 ID=mRNA_Ecto-sp8_S_contig913.30442.1|Name=mRNA_Ecto-sp8_S_contig913.30442.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=903bp|location=Sequence derived from alignment at Ecto-sp8_S_contig913:4910..7649+ (Ectocarpus species8 EcLAC_412)back to top |