mRNA_Ecto-sp8_S_contig11826.2140.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11826.2140.1 vs. uniprot
Match: D7FVD5_ECTSI (Small ubiquitin-like modifier n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVD5_ECTSI) HSP 1 Score: 132 bits (331), Expect = 2.270e-34 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1
Query: 88 TGEETYFKVKKTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQGG 291
TGEETYFKVKKTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQGG
Sbjct: 14 TGEETYFKVKKTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQGG 81
BLAST of mRNA_Ecto-sp8_S_contig11826.2140.1 vs. uniprot
Match: A0A7S2UU84_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU84_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.370e-32 Identity = 67/82 (81.71%), Postives = 71/82 (86.59%), Query Frame = 1
Query: 61 TITIRVRDQTGEETYFKVKKTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQGG*ADPV 306
TITIRVRDQTGEET+FKVKKTTRMEKVFTTYASRKGV V+ALRFLLDG RV TP L+LEDQDQIDCMLEQQGG A +
Sbjct: 24 TITIRVRDQTGEETFFKVKKTTRMEKVFTTYASRKGVQVNALRFLLDGERVNPAHTPKMLDLEDQDQIDCMLEQQGGAAKRI 105
BLAST of mRNA_Ecto-sp8_S_contig11826.2140.1 vs. uniprot
Match: A0A835YTL0_9STRA (Ubiquitin-related domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTL0_9STRA) HSP 1 Score: 124 bits (310), Expect = 4.180e-31 Identity = 68/95 (71.58%), Postives = 72/95 (75.79%), Query Frame = 1
Query: 7 DAAASTPKPEGDDKSDASTITIRVRDQTGEETYFKVKKTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQGG 291
D A KP G+ TITIRVRDQTGEET+FKVKKTTRMEKVF+TYA RKGV SALRFLLDG RV TP L+LEDQD IDCMLEQQGG
Sbjct: 8 DVGAEDKKPAGE------TITIRVRDQTGEETFFKVKKTTRMEKVFSTYAQRKGVQASALRFLLDGDRVDPNQTPGELDLEDQDMIDCMLEQQGG 96
BLAST of mRNA_Ecto-sp8_S_contig11826.2140.1 vs. uniprot
Match: A0A7S2G492_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G492_9STRA) HSP 1 Score: 124 bits (310), Expect = 7.360e-31 Identity = 62/89 (69.66%), Postives = 75/89 (84.27%), Query Frame = 1
Query: 25 PKPEGDDKSDASTITIRVRDQTGEETYFKVKKTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQGG 291
PKP D+K + TITIRVRDQTGEET+FKVKK+TR EKVF+TYA RKGV+V++LRFL+DG R+ +P L++EDQDQIDCMLEQQGG
Sbjct: 29 PKPSADEKGE--TITIRVRDQTGEETFFKVKKSTRFEKVFSTYAQRKGVNVASLRFLIDGERINPSQSPAELDMEDQDQIDCMLEQQGG 115
BLAST of mRNA_Ecto-sp8_S_contig11826.2140.1 vs. uniprot
Match: A0A7S2W0L4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0L4_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.430e-30 Identity = 65/89 (73.03%), Postives = 72/89 (80.90%), Query Frame = 1
Query: 25 PKPEGDDKSDASTITIRVRDQTGEETYFKVKKTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQGG 291
PKP DD A+TITIRV+DQ+GEET+FKVKKTTRMEKVF TYASRKGV LRFLLDG R+ E TP L+LEDQDQIDC+LEQ GG
Sbjct: 29 PKPAADD---ANTITIRVKDQSGEETFFKVKKTTRMEKVFNTYASRKGVRTDTLRFLLDGDRINGEMTPEQLDLEDQDQIDCLLEQVGG 114
BLAST of mRNA_Ecto-sp8_S_contig11826.2140.1 vs. uniprot
Match: A0A6U5EFS5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EFS5_9STRA) HSP 1 Score: 121 bits (304), Expect = 3.490e-30 Identity = 62/88 (70.45%), Postives = 70/88 (79.55%), Query Frame = 1
Query: 28 KPEGDDKSDASTITIRVRDQTGEETYFKVKKTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQGG 291
KPE + ITIRVRDQTGEET+FK+KKTT+M KVF TYA RKGV V++LRFLLDG R+ EDTP LEL+DQDQIDCMLEQ GG
Sbjct: 5 KPEPKAEGGGEPITIRVRDQTGEETFFKIKKTTKMSKVFNTYAQRKGVQVNSLRFLLDGDRIQNEDTPAKLELDDQDQIDCMLEQMGG 92
BLAST of mRNA_Ecto-sp8_S_contig11826.2140.1 vs. uniprot
Match: B7G0R2_PHATC (Small ubiquitin-like modifier n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0R2_PHATC) HSP 1 Score: 119 bits (297), Expect = 3.820e-29 Identity = 59/84 (70.24%), Postives = 71/84 (84.52%), Query Frame = 1
Query: 40 DDKSDASTITIRVRDQTGEETYFKVKKTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQGG 291
D K A +IT+RVRDQTGEET+FK+KKTT+M+KVF TYA+RKGV V++LRFLLDG R+ + TP LELEDQDQIDC+LEQ GG
Sbjct: 9 DVKESAESITVRVRDQTGEETFFKIKKTTKMQKVFETYATRKGVQVNSLRFLLDGDRITPDQTPKMLELEDQDQIDCVLEQTGG 92
BLAST of mRNA_Ecto-sp8_S_contig11826.2140.1 vs. uniprot
Match: A0A1Z5JHQ4_FISSO (Small ubiquitin-related modifier n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHQ4_FISSO) HSP 1 Score: 117 bits (292), Expect = 1.340e-28 Identity = 57/85 (67.06%), Postives = 70/85 (82.35%), Query Frame = 1
Query: 37 GDDKSDASTITIRVRDQTGEETYFKVKKTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQGG 291
GDD+ + +TIR+RDQ GEET+FK+KKTT+M+KVF TYA+RKG+ +++LRFLLDG RV TP LELEDQDQIDCMLEQ GG
Sbjct: 3 GDDEPNPDALTIRIRDQQGEETFFKIKKTTKMQKVFETYATRKGLQIASLRFLLDGERVEPTSTPKMLELEDQDQIDCMLEQAGG 87
BLAST of mRNA_Ecto-sp8_S_contig11826.2140.1 vs. uniprot
Match: A0A2D4C8M1_PYTIN (Ubiquitin-like domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8M1_PYTIN) HSP 1 Score: 116 bits (291), Expect = 2.500e-28 Identity = 58/85 (68.24%), Postives = 69/85 (81.18%), Query Frame = 1
Query: 37 GDDKSDASTITIRVRDQTGEETYFKVKKTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQGG 291
G+DK + ITIRV+DQ+GEET+FKVK T+MEK+F+ YA RKGV VSALRFLLDG+R+ + TP LELEDQDQIDC LEQ GG
Sbjct: 12 GEDKKKSEAITIRVKDQSGEETFFKVKPNTKMEKIFSAYAQRKGVPVSALRFLLDGTRISGDQTPKMLELEDQDQIDCALEQVGG 96
BLAST of mRNA_Ecto-sp8_S_contig11826.2140.1 vs. uniprot
Match: G4ZVC5_PHYSP (Ubiquitin-like domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZVC5_PHYSP) HSP 1 Score: 116 bits (291), Expect = 2.730e-28 Identity = 63/99 (63.64%), Postives = 72/99 (72.73%), Query Frame = 1
Query: 1 MSDAAASTPKP--EGDDKSDASTITIRVRDQTGEETYFKVKKTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQGG 291
MSD TP DDK A ITIRV+DQ+GEET+FKVK T+MEK+F+ YA RKGV SALRFLLDG+R+ + TP LELEDQDQIDC LEQ GG
Sbjct: 1 MSDEVPPTPDTGSNNDDKKKAEAITIRVKDQSGEETFFKVKPNTKMEKIFSAYAQRKGVPASALRFLLDGTRISGDQTPKMLELEDQDQIDCALEQVGG 99 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11826.2140.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11826.2140.1 >prot_Ecto-sp8_S_contig11826.2140.1 ID=prot_Ecto-sp8_S_contig11826.2140.1|Name=mRNA_Ecto-sp8_S_contig11826.2140.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=98bp MSDAAASTPKPEGDDKSDASTITIRVRDQTGEETYFKVKKTTRMEKVFTTback to top mRNA from alignment at Ecto-sp8_S_contig11826:190..4110+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11826.2140.1 ID=mRNA_Ecto-sp8_S_contig11826.2140.1|Name=mRNA_Ecto-sp8_S_contig11826.2140.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3921bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11826:190..4110+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11826:190..4110+ >mRNA_Ecto-sp8_S_contig11826.2140.1 ID=mRNA_Ecto-sp8_S_contig11826.2140.1|Name=mRNA_Ecto-sp8_S_contig11826.2140.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=294bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11826:190..4110+ (Ectocarpus species8 EcLAC_412)back to top |