mRNA_Ecto-sp8_S_contig118.2116.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig118.2116.1
Unique NamemRNA_Ecto-sp8_S_contig118.2116.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig118.2116.1 vs. uniprot
Match: D8LAU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAU5_ECTSI)

HSP 1 Score: 494 bits (1271), Expect = 2.590e-169
Identity = 245/249 (98.39%), Postives = 248/249 (99.60%), Query Frame = 2 
Query:  212 MSSSQSEGAKDFLDRFVTFVAGTYRNDKCIKLLGYSLSTIAQIIRYRNGGKDTRRSEGLNQLYGALSTARVVFRMQGTAEAVWELKHLSGADGWDDVRIRPLARLQALTNVFYHPMEEVALAGGIAPKLFPVDQEWWWARSDWAWLAFCIIDMYVNVLKGRELRRREEGVRRKLRDCAESETAGLRQALSQIAASKRQVALQQLRMVFYLPNAVHWAFIKPPLHPLVVAALGLGEAAVGAVQAFPPASR 958
            MSSSQSEGAKDFLDRFVTFVAGTYRNDKCIKLLGYSLSTIAQIIRYRNGGKDTRRSEGLNQLYGALSTARV+FRMQGTAEAVWELKHLSGADGWDDVRIRPLARLQALTNVFYHPMEEVALAGGIAPKLFPVDQ WWWARSDWAWLAFCIIDMY+NVLKGRELRRREEGVRRKLRDCAESETAGLRQALSQIAASKRQVALQQLRMVFYLPNAVHWAFIKPP+HPLVVAALGLGEAAVGAVQAFPPASR
Sbjct:    1 MSSSQSEGAKDFLDRFVTFVAGTYRNDKCIKLLGYSLSTIAQIIRYRNGGKDTRRSEGLNQLYGALSTARVIFRMQGTAEAVWELKHLSGADGWDDVRIRPLARLQALTNVFYHPMEEVALAGGIAPKLFPVDQAWWWARSDWAWLAFCIIDMYMNVLKGRELRRREEGVRRKLRDCAESETAGLRQALSQIAASKRQVALQQLRMVFYLPNAVHWAFIKPPVHPLVVAALGLGEAAVGAVQAFPPASR 249
[Close]
BLAST of mRNA_Ecto-sp8_S_contig118.2116.1 vs. uniprot
Match: A0A835YVI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVI8_9STRA)

HSP 1 Score: 193 bits (490), Expect = 3.590e-53
Identity = 97/240 (40.42%), Postives = 150/240 (62.50%), Query Frame = 2 
Query:  230 EGAKDFLDRFVTFVAGTYRNDKCIKLLGYSLSTIAQIIRYRNGGKDTRRSEGLNQLYGALSTARVVFRMQGTAEAVWELKHLSGADGWDDVRIRPLARLQALTNVFYHPMEEVALAGGIAPKLFPVDQEWWWARSDWAWLAFCIIDMYVNVLKGRELRRREEGVRRKLRDCAESET-AGLRQALSQIAASKRQVALQQLRMVFYLPNAVHWAFIKPPLHPLVVAALGLGEAAVGAVQAFP 946
            +G +  LD++V + +  + +DK +K  GY+ S++A ++R  NGGK T  +EGL++LYG +   R + R  GT +A+  +++ S    W D RIR L + QA T + YHPME V     I PKL P++ +WW+A++ + W+A+ + D+Y+++LK +EL+R +     +L   A+ E  A  + A++   A +R V LQ  R +FYLPNA+HW+F+KP L    VAALGL EA VG  Q FP
Sbjct:    5 KGGRTLLDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFP 244
[Close]
BLAST of mRNA_Ecto-sp8_S_contig118.2116.1 vs. uniprot
Match: L1IT62_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IT62_GUITC)

HSP 1 Score: 87.8 bits (216), Expect = 9.260e-16
Identity = 74/220 (33.64%), Postives = 106/220 (48.18%), Query Frame = 2 
Query:  290 DKCIKLLGYSLSTIAQIIRYRNGGKDTRRSEGLNQLYGALSTARVVFRMQGTAEAV-WELKHL---SGADGWDDVRIRPLARLQALTNVFYHPMEEVALAGGIAPKLFPVDQEWWWARSDWAWLAFCIIDMYVNVLKGRELRRREEGVRRKLRDCAESETAGLRQALSQIAASKRQVALQQLRMVFYLPNAVHWAF---IKPPLHPLVVAALGLGEAAVG 928
            DK +K+  Y L  +AQ   +R         E L       S  RV  R+ G+   +  EL ++   S   GW D  IR    LQ+ T + Y+P+E    AG IAPKLFP+D       S   W+ + +ID+Y    + +EL+R E  ++        S TA  +   ++I  S+R +    LR+V YLPNA+HW      K  L   +V ALGL EA +G
Sbjct:   15 DKAMKIASYLLPLVAQTCPHRL----QTLKEALKLFGSHFSMYRVTTRLGGSPFGLPSELDNIINSSWVGGWKDNVIRRCVILQSYTMLGYYPLEHAVWAGTIAPKLFPLDVATLSRLSCVFWVLWIVIDIYATHRRWQELKRMETKLKMN-----GSLTANNK---AKIERSRRSLIRYTLRLVLYLPNAIHWTLDEKSKFALADWMVNALGLAEAVLG 222
[Close]
BLAST of mRNA_Ecto-sp8_S_contig118.2116.1 vs. uniprot
Match: A0A7S0M254_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M254_9CRYP)

HSP 1 Score: 65.9 bits (159), Expect = 6.890e-9
Identity = 51/161 (31.68%), Postives = 82/161 (50.93%), Query Frame = 2 
Query:  218 SSQSEGAKDFLDRFVTFVAGTYRNDKCIKLLGYSLSTIAQIIRYRNGGKDTRRSEGLNQLYGALSTARVVFRMQGTAEAVW-ELKHL---SGADGWDDVRIRPLARLQALTNVFYHPMEEVALAGGIAPKLFPVDQEWWWARSDWAWLAFCIIDMYVNVLK 688
            SS +      L + V F +  +  DK +K   Y+   +A     +  G  +  +EGL QL   LS  R+  R+ G    V  EL+++   S   GW+D RI+     Q++T + Y+P+E +A AG IAP+LFPV+ +     S   W+ + +ID+Y   L+
Sbjct:    2 SSVNSAPVQLLMQVVDFHSSVFGWDKTMKNFCYAFG-LASCAASQIYGPKSALAEGLKQLGSNLSMYRMCTRIGGGPFGVPPELENMINHSWYGGWEDKRIKWCVWWQSVTMLGYYPLENLAWAGYIAPRLFPVNADKLCQASCVFWVLWILIDIYATRLR 161
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig118.2116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LAU5_ECTSI2.590e-16998.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YVI8_9STRA3.590e-5340.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L1IT62_GUITC9.260e-1633.64Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S0M254_9CRYP6.890e-931.68Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig118contigEcto-sp8_S_contig118:1262..7325 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score130.6
Seed ortholog evalue1e-27
Seed eggNOG ortholog112098.XP_008607189.1
Model size2115
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Peroxisomal biogenesis factor 11 (PEX11)
EggNOG OGs2CXQZ@1,2RZ56@2759
Ec32 ortholog descriptionPeroxisomal biogenesis factor 11
Ec32 orthologEc-27_006350.1
Cds size750
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig118.2116.1prot_Ecto-sp8_S_contig118.2116.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig118 1473..6171 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143240.3021898-UTR-Ecto-sp8_S_contig118:1261..14721681143240.3021898-UTR-Ecto-sp8_S_contig118:1261..1472Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig118 1262..1472 +
1681143240.3793042-UTR-Ecto-sp8_S_contig118:6171..73251681143240.3793042-UTR-Ecto-sp8_S_contig118:6171..7325Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig118 6172..7325 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143240.3121881-CDS-Ecto-sp8_S_contig118:1472..15731681143240.3121881-CDS-Ecto-sp8_S_contig118:1472..1573Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig118 1473..1573 +
1681143240.3208766-CDS-Ecto-sp8_S_contig118:2531..26021681143240.3208766-CDS-Ecto-sp8_S_contig118:2531..2602Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig118 2532..2602 +
1681143240.3306937-CDS-Ecto-sp8_S_contig118:3010..31491681143240.3306937-CDS-Ecto-sp8_S_contig118:3010..3149Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig118 3011..3149 +
1681143240.3394327-CDS-Ecto-sp8_S_contig118:4020..41441681143240.3394327-CDS-Ecto-sp8_S_contig118:4020..4144Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig118 4021..4144 +
1681143240.3484194-CDS-Ecto-sp8_S_contig118:5513..56131681143240.3484194-CDS-Ecto-sp8_S_contig118:5513..5613Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig118 5514..5613 +
1681143240.3656757-CDS-Ecto-sp8_S_contig118:5956..61711681143240.3656757-CDS-Ecto-sp8_S_contig118:5956..6171Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig118 5957..6171 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig118.2116.1

>prot_Ecto-sp8_S_contig118.2116.1 ID=prot_Ecto-sp8_S_contig118.2116.1|Name=mRNA_Ecto-sp8_S_contig118.2116.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=250bp
MSSSQSEGAKDFLDRFVTFVAGTYRNDKCIKLLGYSLSTIAQIIRYRNGG
KDTRRSEGLNQLYGALSTARVVFRMQGTAEAVWELKHLSGADGWDDVRIR
PLARLQALTNVFYHPMEEVALAGGIAPKLFPVDQEWWWARSDWAWLAFCI
IDMYVNVLKGRELRRREEGVRRKLRDCAESETAGLRQALSQIAASKRQVA
LQQLRMVFYLPNAVHWAFIKPPLHPLVVAALGLGEAAVGAVQAFPPASR*
back to top

mRNA from alignment at Ecto-sp8_S_contig118:1262..7325+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig118.2116.1 ID=mRNA_Ecto-sp8_S_contig118.2116.1|Name=mRNA_Ecto-sp8_S_contig118.2116.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6064bp|location=Sequence derived from alignment at Ecto-sp8_S_contig118:1262..7325+ (Ectocarpus species8 EcLAC_412)
CGCTGCGCGATCGCGTGATCACACCGCCAGGTTTGCAGCCACCACCGGCT
TCGCACCGTCAAGAAAGAATCCATCTCGTCCAGGCAATATCTATTGTTGG
CCTTGGTGCCGGCAGGAATATTTCCCGACAGACGAAGAGCTTTGTGTTTG
AGGACACACGCAAATCCTCTGCCTAAGAGCGGCGTCAAGAAGAGAGCCAG
CCGATCTCCTGATGTCATCATCCCAGAGCGAGGGAGCGAAAGACTTCCTC
GATAGGTTTGTCACCTTCGTCGCTGGCACCTACCGCAACGACAAGTGCAT
CAAGCTGCTGGGGTAAGTTGAAGGAGTCGTTGTATTTTTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNACTCCAGATTTGCTTATCCAAGGAGGCTAA
GCATGTACGCACCATTCACCACCTCGCAACTCGCACAAAGCATGGGCGGA
GGAACTCATTTCTTGCCCACCATTTTCGGCGTGATCCCGGTGATGCCTAC
ATCGAGAGAGCTTGAGCCACATCCAAAAGCAAACGGGAAATGTGTGCCTT
CTCTGTGTCCCATGTAAATTTATTCGGACAAAAGCTTTTCCTCCTTTCGG
TGTATTGTCTGGACGCGTCAGCCGGGGACTCACAGGGAAGAACGCCGAAC
ATGAGGGTATACAGCAGTACCTGCCAGCCATACAGCAGCACATGTACCTG
CGAGCGACGGCATCAAACACTACACAGACTACTGCTGTACGCAATCTCAT
TCCCGTAATTTTCAGTACAGACGCTGCGAACGACGCCGCAAGCGATGTGT
GAACATTGCTACATTGCAAGACTTACACGCTGCTCAGAATATCAGTGAAT
CCCCAGCGGATATACTAGCACCACGGTCGCGATGTTTTCGGTGAGCAAGG
CGTCCTATGCGTAGAATATGTACGGCTGATCCCTTTTGACCCTCGGAGGA
GTCGCCTCTTCTGTCGCTCATTGGCTTGTCGTTACCCACCTCCTCCCTCC
TTGGCCTCCTGGCGTGACAGGTACTCCTTGTCTACGATCGCTCAGATTAT
TCGATACCGGAATGGCGGAAAGGACACCCGAAGATCAGAGGGTGAGCCGA
GCAAGGAAAGCGCCAGAGAGCACGCGACGGTTCCTGCCGGTGCCAACCAA
CGGTTCATGTGGTTGAAAGCTGATCGTTGTGCTGGTGGCAGGCACGCAGC
CCTCACCCATTTTTCGGTTATCCCCGTCGCGTGATGGGGGATTCTGTGCG
GGCCACCGGCGGTAACGCACATAGAAACCCCGCGTTCGTAGCGAACAGTG
GCAACGCATGTGGTGGGGATGTCGACCACCTAATGCTGAGTCGTTGAGAG
TGGTCTGCTGACCGCTCGTATATCGCCCCCGCAAATCCTCAACCGATCTG
TGAGCAAATGCACTACCCCAATCTGTGTGTAGTAACTATCGGGAGACTTT
GATGTTGCACGCCCCCTACCGATTTCAACTTTCTATATACCGACGGCAGG
TCTTAACCAGCTGTATGGGGCCCTGTCCACAGCCCGCGTGGTTTTTCGGA
TGCAGGGAACGGCTGAGGCCGTGTGGGAGCTAAAGCACCTGTCCGGCGCA
GACGGGTGGGACGATGTCAGGATCCGACCGTTGGCGCGGTGAGAGCGGGT
CGCTTGATATGTAGGGGCATCACCACCGATGGGGCTACCGTAGTCAAGTC
TAGCGTACAAGCACCGTGCAGGCTGATTTCCGGGGATTGCCGAGAAGAGG
ATGCATTACTCTTCCTAGACTTTGCGGGGCTGTTTTTCATGCAGCAGATG
CCGAGCAAGAGGGTTTGGTCCTCTAATACACGCCGTGTGGCTGCTCTTGC
CGCGCGAGTGTCGCCGTGTTCGCTTGGAGTCTTGCCTCTTACTGCGCTTG
TCGGTCGGCATTGCCGTTCTTCCTTGAAAGCAATTTCGGCACGCACGCGA
GTTTCACGAAGACCATGGGCTGCTGCTGTATACTCTTGTGGTGCACCTAC
TGATGCTGTACTGCTGTGTTGTAGAACTTCGAGGTGTGTGTGTTTGACGC
GTTGCTAGAAACTCGTACAGCACGAGGTTGATTGTTTTCCTCTCTATCCC
CAACAGAGCCGGCTTCACACACACCTATTGGTGAAGGCTTGCTGGGTGGG
TCTTCGGCTCTCTGTACACCACGGCTCCTTGTTGAAGCCAGTGATACCCT
CGTGGGGGTACATTCGACAACATGGATCACTTTGTTGGCAGATAGCTGGT
GGCTACAACCGCCCAAGCAGGTGTAAGAGGAGTTTCGGCAGACGACGTCT
TGGGGCAACTTAACCTTGGCAACAAGGGTCAATGGCGCCCGCGTTCTTGG
TGGCGTCCCTGCTCGGCGTAGCAGCAGTGGTCTAATGGCTCAGGGCAGTA
GCACAAGGTCCTCCCGGTCCTCCCCATCCCCACCTCACTACTGCCTCCCA
ACAGCACCACCCTAATCCGATGCACACTATCTGTCTCCCCTCCACTCACT
GTCTACCAGGCTGCAAGCCTTGACCAATGTGTTTTACCACCCGATGGAGG
AAGTCGCTCTGGCGGGGGGGATCGCACCGAAGCTCTTTCCGGTGGACCAG
GAGTGGTGGTGGGCGAGATCTGATTGGGCATGGGTGAGAGCAGATGCTCT
AATATCTATTCACGCCTGATGCAACTGTTTAGATGAGCACCTGAAGATTT
TCGTGTGCATGTGTGCCTAGTAGTAATAATAGTCGTAGCTGTGGCTGTCG
TTGTTGGGGGTGTTGTCCATTGCAAGGCGAAGACTCGGCATCAAGCGGAC
ATACACGCGCTAGCCGCGCAACCGCGCAGCCCTCCGTATCCACTGCAGGC
CGCCAATGCTACGAAGTCCCCGCTTGTGCACGTGTGCGTTGCTTGCACAA
CCTGGTGTGTCGAGCTACTAGCGGCGAGCATGACGAAGGAAAAAGGGTCC
CGCGCCTGCCGGGGAAGGTACGGCTGGCCGGCTCGGGGTGATACGTCGTG
CTCTACCTTCGCGGCTTCCTCACCATCTTTTTGTTGTCCTTCTCGTTGCG
GGCGGCTGCGCCACCGACGTCGTCGTCTCGAAGAGGCCCCGGCACTGCCC
CAGCCCCTCCTCGAGGCGACGACGTCGGCGCCGCAGCTGCACATGACGAG
AAGGACGGCGAAATGACGGTGAGGAAGCTGCGAGGGTTGTGCAAGATGCA
TCTCTTTGAGTCGGCGAAGCGCAACTTTCTGGCAGGCGCGGGGATTCGGC
GATCTTCGGCAGTTTTGCTTCGGCACCAGCTGCCGTTCTGCGTGCGCCCG
TGCGTAGGGTTGCTGTGTTGACTTGGTGTCTGTACCTCCGCGCCTTCCCG
TGGAGGCTACCGCGCTTTCCCACGGTAGTTGGATTTAATCTGAGGACTGG
GTTAACCCCGACCGATGTTGATGATGTAAACCTTGAATTAACACACCGTG
CTCCTTCCAGCACACAAACATAATCAGTAAACATGTGCGCGTGCTCTCTC
TCGAGGGGACCCGCACTTGGACCCCCAATAGCATACCCCCCCCCCAAAAA
AAAAAAAAGTTTCCCAGATTGGGTCTCGTATCCCAGTACCCCAAACATAT
GGTAAAGGCCTCCTGTCCAAGTGACTAATTGCGAGGGCGCGGCGGTCCTA
TGCTTGCTTCAACGCTTTTGACGAACTTTTTTTCTCTCCAGGAGGTGAGG
TCGTACTCGTGTGAACTTGCCCGCCCGGCAACGTAGAGAGGTCGGGTAGT
ATTCGGTACGACGTTAGGTGGTGCGTGGACGAAGAATCGAGCAGGATCTA
GCATTCTCCCCCTCGTCCTGGTGCTGTTGTTGCTGTTCCTGTGTCGCGGT
ACAATCGTATATCCAGCACCAACAAGCCCGTCAGCAGCAACAAACTAAAC
CAGAATCAAGTTTTCTCCACCTCAATCTCCGTTCTTTCATCGTTCCGCGA
AAATGGTGCTCTTGACCGGCGGCGCAATTAAAATCGTCCTTCGTCGCGGC
AGCTTGCCTTCTGCATCATCGACATGTACGTGAACGTGCTCAAGGGCAGA
GAGCTACGGAGGCGAGAGGAAGGCGTACGGAGAAAACTCAGGGATTGTGC
GGGTGAGTGAGCTTGGTTAACGAGGAATAGAGAGGGAAGGGGACGGGGGC
AGCGTCGGCGGCGGTGGAAATCGTTTATTCGGCGTCGTCATGGAAACGGC
GTCAAGAAATGGAGTTGTTTTGTGTTTTCCCCGTGCCTTCAATGCCGCGC
CAGCAGTGAGCTTGGTCAGAGAAAGGCTAACGCCTGCGACGGTGGTACCA
ACGACCACGTTATCTTGCCGGCAGTCTCAAAAGTAAGGGTATTGTCAGTG
CCAAATCTATGTGTTGCCCGGCAAGAATAGCCTGCGTGAGGCTACCATAC
CGACGGCCGCCACCGCTTGCCTCCTCTCGTGTTCCCCACGTGCAGAATCT
GAGACCGCCGGGCTGCGACAAGCGCTGTCCCAGATCGCCGCGAGCAAGAG
GCAAGTGGCGTTGCAGCAATTGCGGATGGTGTTCTACCTTCCCAACGCCG
TTCACTGGGCGTTTATCAAACCTCCTTTGCACCCGCTAGTCGTGGCCGCG
CTGGGCTTGGGGGAGGCAGCGGTTGGAGCGGTCCAGGCTTTCCCGCCTGC
GAGTCGATAGGTTTTTAGCCACGGGTGTGTGTGTGGATGGATCGTTGGGT
GTGTGGGGGTTGCTTGTTGCGAGGACCCCACAAGAGAGCGGGACGGGCCC
GGCTACATAGCGATCTCCAAAGTGTGTGAGGTAAGACAATTCTGGCACTG
GTAGCGGGACTGGCGCGGACGTGGTGGTTAGCGCTACTATGCATACATCC
GATGGAAAGATGCCTTCGCGAGTTTCCCTTGATGTTCTGTTTTGTCCCGA
TTCCGGTGACGCCGGGGAGACTGAGCAGGGGTGTTCATGCGTGTTTTTGA
CAAGGTGTTCGTGCGGTGCAACTTCTTGTTGGCTTTTATACTGTACAGTG
GTATTTCTCGGGTTACTAGTACTATGCCGTGGACGTATGGTGATACTCTT
GTTGTTCCTCACAGGTCGACACAGCTGTGTGTGTGTACCCGCGTTATTCG
TGAAGTGTGACCATAACCTGCGGTATTTCACGACCTCGAAGCTTTGAAAA
CTATCCGTATCGTAGGTCTCAAGTTGGTGTTGGTGCTGCACCAATTCTGG
GGCACACCATGGGGCCACGTTGAAGGTAGTCTAGAACTGCCAATCGGTTC
TCTCTCTACCGCTTTCTGTATATGCTGGTGAGCTGATCAAGACAATTTTG
TTTTTGGTGTACATTTCGTGAACCGATGGCGCTCCATTGCGTTGGGTGGG
AGCACATTTGTGCACCCCCAGGTTAAGGATGTTGAGGTGCGGAAGGCGTT
CTGAAAGCATGAGTGGGGGGTGACACGCGTGGAAGCGTCAATTTTGTTTA
ACAGCAGGGAGGCGTCGTAAGCACGAAACAAGTTTGATAGTAGGTGTGTT
GCTGGATAGGTTTTACGGTGTCACGAATGCAAAACGGGGTGCCCTATGTG
TGTTGCCGCATCGCCTGCCGCTGCTGTGAGCTTGCAATCCTCATTGAAAA
ACTCGATCAGTAAGTTTAAGTTGCTGTAATTCGCTGTGATACCTACTGTT
GTCCTTGAAATGAAACGCGGAAGGGGTGCTGGATGCGATTCGTGCCGTAG
ATTGGTCGTAGAATACACCCGAAAGGGTGGTGGCGAGTGCCTATCTTCCG
TCCTCGCCGCCCTGATTTAGTGCTGAGATGGGAGGTTTTGATGCTGCAGC
ATATTCCATGAGCT
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig118:1262..7325+

>mRNA_Ecto-sp8_S_contig118.2116.1 ID=mRNA_Ecto-sp8_S_contig118.2116.1|Name=mRNA_Ecto-sp8_S_contig118.2116.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=750bp|location=Sequence derived from alignment at Ecto-sp8_S_contig118:1262..7325+ (Ectocarpus species8 EcLAC_412)
ATGTCATCATCCCAGAGCGAGGGAGCGAAAGACTTCCTCGATAGGTTTGT
CACCTTCGTCGCTGGCACCTACCGCAACGACAAGTGCATCAAGCTGCTGG
GGTACTCCTTGTCTACGATCGCTCAGATTATTCGATACCGGAATGGCGGA
AAGGACACCCGAAGATCAGAGGGTCTTAACCAGCTGTATGGGGCCCTGTC
CACAGCCCGCGTGGTTTTTCGGATGCAGGGAACGGCTGAGGCCGTGTGGG
AGCTAAAGCACCTGTCCGGCGCAGACGGGTGGGACGATGTCAGGATCCGA
CCGTTGGCGCGGCTGCAAGCCTTGACCAATGTGTTTTACCACCCGATGGA
GGAAGTCGCTCTGGCGGGGGGGATCGCACCGAAGCTCTTTCCGGTGGACC
AGGAGTGGTGGTGGGCGAGATCTGATTGGGCATGGCTTGCCTTCTGCATC
ATCGACATGTACGTGAACGTGCTCAAGGGCAGAGAGCTACGGAGGCGAGA
GGAAGGCGTACGGAGAAAACTCAGGGATTGTGCGGAATCTGAGACCGCCG
GGCTGCGACAAGCGCTGTCCCAGATCGCCGCGAGCAAGAGGCAAGTGGCG
TTGCAGCAATTGCGGATGGTGTTCTACCTTCCCAACGCCGTTCACTGGGC
GTTTATCAAACCTCCTTTGCACCCGCTAGTCGTGGCCGCGCTGGGCTTGG
GGGAGGCAGCGGTTGGAGCGGTCCAGGCTTTCCCGCCTGCGAGTCGATAG
back to top