mRNA_Ecto-sp8_S_contig11602.1952.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11602.1952.1 vs. uniprot
Match: D7FXZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ1_ECTSI) HSP 1 Score: 406 bits (1044), Expect = 1.650e-140 Identity = 212/288 (73.61%), Postives = 238/288 (82.64%), Query Frame = 2
Query: 5 VDMHQHLP-YGMARLACSSFYEGKWAGADKAYEHAVGQEFARALLVALWPEQYKSAEWREWEEEHDFLGILEGDLSEATTTREKDELTFGMYTKLNESAEFRKEVEEYAASAHEKKEVESDDLDVENPSPRVSAFAMLWSFPLLYEWACHAVFFAVIHQQLVESVFSKYDTCTKLHDSREIDIVRLGQFRSAQSRRIRRLHASNHEIRVAGNKAIAEARALRXXXXXXXXXXXXXXXRSHDVTQFLKAANDKAKFGPEWQVRSVIEDVVSESESESGLSDELSGEDDD 865
+D H P +++ YEGKWAGADKA EHAVG+EFARALLVALWPE+ +SAEWREW+EEHD LGILEGDLSEATT EKD+LTFGMYT+LNESAEFRKEVE YAASAHEKKEV SDDLDV+NP PRVSAF M+W+FPLLYEWA HA+F AVIH+QLV SVFSKYDTCT+ HDSREIDIVRLGQFRSAQSRRIR+LHASNHEIR AGNKAIAEARALR R HDVTQF++ A +KAK+GP WQVRSV++ +SESESES +S ELSGE+DD
Sbjct: 1 MDRHASAPPLQHGQVSLQLLYEGKWAGADKANEHAVGKEFARALLVALWPEKNESAEWREWQEEHDILGILEGDLSEATTPGEKDKLTFGMYTELNESAEFRKEVEVYAASAHEKKEVVSDDLDVDNPPPRVSAFGMIWNFPLLYEWARHAIFLAVIHEQLVGSVFSKYDTCTQQHDSREIDIVRLGQFRSAQSRRIRKLHASNHEIREAGNKAIAEARALRKAASEAVPNERQQRKRGHDVTQFVRTATNKAKYGPGWQVRSVLD--MSESESESDVSAELSGEEDD 286
BLAST of mRNA_Ecto-sp8_S_contig11602.1952.1 vs. uniprot
Match: A0A6H5JSZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ3_9PHAE) HSP 1 Score: 346 bits (887), Expect = 5.700e-117 Identity = 172/256 (67.19%), Postives = 203/256 (79.30%), Query Frame = 2
Query: 2 WVDMHQHLPYGMARLACSSFYEGKWAGADKAYEHAVGQEFARALLVALWPEQYKSAEWREWEEEHDFLGILEGDLSEATTTREKDELTFGMYTKLNESAEFRKEVEEYAASAHEKKEVESDDLDVENPSPRVSAFAMLWSFPLLYEWACHAVFFAVIHQQLVESVFSKYDTCTKLHDSREIDIVRLGQFRSAQSRRIRRLHASNHEIRVAGNKAIAEARALRXXXXXXXXXXXXXXXRSHDVTQFLKAANDKAKFG 769
W+DMHQHLPY MARLACSSF+EGKWAG++KA+EHAVGQE+ARA L+ALWPE Y+ AEW W+EEH++L IL DLSEA TT EKDELTFGM++KLN SAEFR EVE YA SA EKKE+ DD D EN +PRVS F M+WSFPLLYEWACHA+ FA IHQQLVES FS +DTCT+ HDSREIDIVRLGQFRS+ SRR++RL+A+N EIR AG+KAIA AR L+ R+HD QFL+ ++K+K G
Sbjct: 8 WMDMHQHLPYSMARLACSSFFEGKWAGSEKAFEHAVGQEYARASLLALWPELYEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYALSAREKKEIVVDD-DAENQAPRVSGFDMIWSFPLLYEWACHAILFAPIHQQLVESDFSTFDTCTQKHDSREIDIVRLGQFRSSHSRRVQRLYATNKEIRQAGDKAIAVARELKKSAAHAIPNERQLRKRTHDTKQFLRDQSEKSKHG 262
BLAST of mRNA_Ecto-sp8_S_contig11602.1952.1 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE) HSP 1 Score: 342 bits (877), Expect = 6.770e-109 Identity = 175/274 (63.87%), Postives = 209/274 (76.28%), Query Frame = 2
Query: 2 WVDMHQHLPYGMARLACSSFYEGKWAGADKAYEHAVGQEFARALLVALWPEQYKSAEWREWEEEHDFLGILEGDLSEATTTREKDELTFGMYTKLNESAEFRKEVEEYAASAHEKKEVESDDLDVENPSPRVSAFAMLWSFPLLYEWACHAVFFAVIHQQLVESVFSKYDTCTKLHDSREIDIVRLGQFRSAQSRRIRRLHASNHEIRVAGNKAIAEARALRXXXXXXXXXXXXXXXRSHDVTQFLKAANDKAKFGPEWQVRSVIEDVVSESES 823
W+DMHQHLPY MARLACSSF+EGKWAG++KA EHAVGQE+ARA L+ALWPE + AEW W+EEH++L IL DLSEA TT EKDELTFGM++KLN SAEFR EVE Y+ SA EKKE+ DD D E+ +PRVS F M+WSFPLLYEWA HA+ FA IHQQLV+SV S YDTCT+ HDSREI IVRLGQFRS+QSRR++RLHA+N EIR AG+K IA AR L+ R D QFL+ ++K+K G W VRSV+++ +S ES
Sbjct: 504 WMDMHQHLPYSMARLACSSFFEGKWAGSEKAIEHAVGQEYARASLLALWPELNEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYSLSAREKKEIVVDD-DAESQAPRVSGFDMIWSFPLLYEWARHAILFAPIHQQLVKSVCSTYDTCTQKHDSREIGIVRLGQFRSSQSRRVQRLHATNKEIREAGDKVIAVARELKKSAAQAIPNDWQLRKRVLDTKQFLRDQSEKSKHGSNWVVRSVLKEEMSSEES 776
BLAST of mRNA_Ecto-sp8_S_contig11602.1952.1 vs. uniprot
Match: A0A6H5JN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE) HSP 1 Score: 284 bits (727), Expect = 2.320e-90 Identity = 155/273 (56.78%), Postives = 193/273 (70.70%), Query Frame = 2
Query: 35 MARLACSSFYEGKWAGADKAYEHAVGQEFARALLVALWPEQYKSAEWREWEEEHDFLGILEGDLSEATTTREKDELTFGMYTKLNESAEFRKEVEEYAASAHEKKEVESDDLDVENPSPRVSAFAMLWSFPLLYEWACHAVFFAVIHQQLVESVFSKYDTCTKLHDSREIDIVRLGQFRSAQSRRIRRLHASNHEIRVAGNKAIAEARALRXXXXXXXXXXXXXXXRSHDVTQFLKAANDKAKFGPEWQVRSVIEDVVSESE-SESGLSDELS 850
M RLACSSFYEGKWAG+++ +EHAVGQE ARALL+A WP +Y+S EW+ WEE++ F +++LT GM++KL SAEFR+E+E YAASAHEKK+V SD +DVEN +PRVS F M+W+FP LYEWACHAVFFA IHQQLVES S YDT T+ HDSRE+DIVRLGQF S SRR+ RL +SN EIR G+KAIA A L+ HD +FLK ++K+K G +W V+SV+E+V+S SE SES S+ LS
Sbjct: 165 MTRLACSSFYEGKWAGSEEGFEHAVGQEVARALLLAFWPNRYESTEWKGWEEQNTFR---------------ENKLTLGMFSKLAASAEFREELERYAASAHEKKKVVSD-VDVENQTPRVSGFDMIWTFPQLYEWACHAVFFAPIHQQLVESSSSTYDTGTQKHDSRELDIVRLGQFSSRGSRRVERLDSSNQEIRDEGDKAIAVATVLKKSASHAVPNERQLRNGEHDWRKFLKDKSEKSKHGSKWVVKSVMEEVLSSSEESESEASENLS 421
BLAST of mRNA_Ecto-sp8_S_contig11602.1952.1 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI) HSP 1 Score: 157 bits (398), Expect = 5.630e-41 Identity = 90/223 (40.36%), Postives = 128/223 (57.40%), Query Frame = 2
Query: 2 WVDMHQHLPYGMARLACSSFYEGKWAGADKAYEHAVGQEFARALLVALWPEQYKSAEWREWEEEHDFLGILEGDLSEATTTREKDELTFGMYTKLNESAEFRKEVEEYAASAHEKKEVESDDLDVENPSPR-VSAFAMLWSFPLLYEWACHAVFFAVIHQQLVESVFSKYDTCTKLHDSREIDIVRLGQFRSAQSRRIRRLHASNHEIRVAGNKAIAEARALR 667
W++ HQ LP MAR+ C SF+ + A E AVG EFARA L W Y+ E E ++ L DL T R KDELTFG++++++ R E+E+YA S D +V+ +P+ SA A L+ FPLLY+ CH +F IHQQL+E+ FSK+D+C + D E+DIVR+G ++SA+SR I A+ +IR AG K + +AR +
Sbjct: 233 WMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEP--RTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGW-------GDKEVDQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAK 446
BLAST of mRNA_Ecto-sp8_S_contig11602.1952.1 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE) HSP 1 Score: 147 bits (370), Expect = 3.480e-37 Identity = 89/217 (41.01%), Postives = 118/217 (54.38%), Query Frame = 2
Query: 5 VDMHQHLPYGMARLACSSFYEGKWAGADKAYEHAVGQEFARALLVALWPEQYKSAEWREWEEEHDFLGILEGDLSEATTTREKDELTFGMYTKLNESAEFRKEVEEYAASAHEKKEVESDDLDVENPSPRVSAFAMLWSFPLLYEWACHAVFFAVIHQQLVESVFSKYDTCTKLHDSREIDIVRLGQFRSAQSRRIRRLHASNHEIRVAGNKAIAEA 655
+ HQ LP MAR+ C SFY A E AVG EFARA WP Y+ E E + L DL T R KDELT G+++ ++ R E+E+YA S KE++ E+ SA A L+ PLLY CH +F IHQQL+E+ FSKYD+C K D E+D+VR+G ++SA+SR I + A + +IR AG K + EA
Sbjct: 235 MQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFPHVAWPGLYEGEP--RTERERQYRTQLAKDLGGTTEARRKDELTLGLFSCIDGDLSVRSELEQYANSGWGDKEID------ESAPKGTSALARLFDLPLLYRLVCHRFYFVPIHQQLIEAFFSKYDSCAKKTDMAEMDVVRVGGWKSAESRDIVCVDAIDDQIRGAGKKVLKEA 443
BLAST of mRNA_Ecto-sp8_S_contig11602.1952.1 vs. uniprot
Match: A0A6H5KR45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR45_9PHAE) HSP 1 Score: 131 bits (329), Expect = 5.700e-32 Identity = 80/197 (40.61%), Postives = 105/197 (53.30%), Query Frame = 2
Query: 2 WVDMHQHLPYGMARLACSSFYEGKWAGADKAYEHAVGQEFARALLVALWPEQYKSAEWREWEEEH------DFLGILEGDLSEATTTREKDELTFGMYTKLNESAEFRKEVEEYAASAHEKKEVESDDLDVENPSPRVSAFAMLWSFPLLYEWACHAVFFAVIHQQLVESVFSKYDTCTKLHDSREIDIVRLGQFRS 574
W+ HQ LP MAR+ C SFY A E AVG E+ARA L WPE+Y+ E E E+ DF G+++ R KDELTFG+++ + E AE R EVE YA S KEV D E + + FP LY++ C +F IHQQL+E+ FSKYDTC K D +D VR+G +++
Sbjct: 184 WMQRHQELPLSMARIGCPSFYARMGIMGKGAVEQAVGPEYARAFLHVGWPERYEGEPRSEREREYRVQLGEDFGGVIDA--------RRKDELTFGLFSIVEEDAEMRCEVEGYAESGFGDKEV-----DEEAEKGTTALVRLFEKFPRLYKFVCVRFYFVPIHQQLIEAFFSKYDTCAKKTDVAVMDSVRVGSWQT 367 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11602.1952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11602.1952.1 >prot_Ecto-sp8_S_contig11602.1952.1 ID=prot_Ecto-sp8_S_contig11602.1952.1|Name=mRNA_Ecto-sp8_S_contig11602.1952.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=295bp MHQHLPYGMARLACSSFYEGKWAGADKAYEHAVGQEFARALLVALWPEQYback to top mRNA from alignment at Ecto-sp8_S_contig11602:4435..5329+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11602.1952.1 ID=mRNA_Ecto-sp8_S_contig11602.1952.1|Name=mRNA_Ecto-sp8_S_contig11602.1952.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=895bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11602:4435..5329+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11602:4435..5329+ >mRNA_Ecto-sp8_S_contig11602.1952.1 ID=mRNA_Ecto-sp8_S_contig11602.1952.1|Name=mRNA_Ecto-sp8_S_contig11602.1952.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=885bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11602:4435..5329+ (Ectocarpus species8 EcLAC_412)back to top |