mRNA_Ecto-sp8_S_contig1160.1948.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1160.1948.1 vs. uniprot
Match: D7FI32_ECTSI (T-complex protein 1 subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI32_ECTSI) HSP 1 Score: 798 bits (2060), Expect = 6.180e-283 Identity = 407/409 (99.51%), Postives = 409/409 (100.00%), Query Frame = 1
Query: 1 RIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNYE 1227
RIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYF+DMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILK+DDVIMMGNYE
Sbjct: 128 RIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKVDDVIMMGNYE 536
BLAST of mRNA_Ecto-sp8_S_contig1160.1948.1 vs. uniprot
Match: A0A835ZI55_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI55_9STRA) HSP 1 Score: 663 bits (1711), Expect = 6.210e-230 Identity = 332/409 (81.17%), Postives = 366/409 (89.49%), Query Frame = 1
Query: 1 RIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNYE 1227
RIG+GFDRAC+ A HL KI+D V FS ++ EPLV TAMTTLSSKIINVHK++MA+I V+AV+AVA++ER DVNFDMIKVDGKPGGELGDTEL+ GIVIDKEFSH QMPK +KDAKLC+LTCPFEPPKPKTKHKLDITSK+AYE+L EREQ+YF MV+QCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRF EL+ +KLG AG VREV+FGTTKDRMLVIE C NS+AVTVLVRGGNKMIV+EAKRSLHDAMCVVRNLIKD RIVYGGGSAEI+CS+ VS AD I GVEQYAVR+FADALDDVPMALAENSGLSPI+ELSAVK+ Q+ +G + LGIDCNQ GT DMK Q IFETLIGKQQQLLLATQVVKMILKIDD+I MG Y+
Sbjct: 135 RIGQGFDRACEIATAHLGKISDTVHFSLEDREPLVATAMTTLSSKIINVHKRQMAEICVNAVLAVADMERKDVNFDMIKVDGKPGGELGDTELVRGIVIDKEFSHPQMPKEIKDAKLCILTCPFEPPKPKTKHKLDITSKEAYERLHEREQQYFDTMVKQCKDSGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFQELSADKLGYAGTVREVAFGTTKDRMLVIEGCKNSNAVTVLVRGGNKMIVDEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEIACSIEVSNAADAIGGVEQYAVRAFADALDDVPMALAENSGLSPISELSAVKAAQVKDGNSHLGIDCNQEGTADMKTQRIFETLIGKQQQLLLATQVVKMILKIDDIITMGQYD 543
BLAST of mRNA_Ecto-sp8_S_contig1160.1948.1 vs. uniprot
Match: A0A7S2SNU9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNU9_9STRA) HSP 1 Score: 642 bits (1657), Expect = 1.780e-223 Identity = 316/409 (77.26%), Postives = 366/409 (89.49%), Query Frame = 1
Query: 1 RIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNYE 1227
R+ EGFD+AC AV+ LE+I+D VEF++++T PL TA TTLSSKIINVH+ +MAKIAVDAV+AVA+L+R+DVNFD+IK++GKPGG L +TEL+ GIV+DK+FSH QMPKVV+DAK+C+LTCPFEPPKPKTKHKLDITS++AYEKL+++EQ YF +MVQQCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRFSEL+ EKLG+AG VREV+FGT K+RMLVIEDC+NSSAVT+LVRGGN MIVEEAKRSLHDAMCVVRNLIKD RIVYGGG+AEI+CS A+S+ AD + G EQYA+R+FADALDD+PMALAENSG SPI++LSAVKSRQ+ E LGIDC GT DMKEQ +FETLIGKQQQLLLATQVVKMILKIDDVIM G Y+
Sbjct: 26 RVAEGFDQACLLAVKTLEEISDTVEFTKEDTTPLFNTASTTLSSKIINVHRDQMAKIAVDAVLAVADLDRHDVNFDLIKMEGKPGGRLDETELVQGIVVDKDFSHPQMPKVVEDAKMCILTCPFEPPKPKTKHKLDITSREAYEKLYDQEQAYFKEMVQQCKDCGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFSELSAEKLGRAGTVREVAFGTLKERMLVIEDCANSSAVTILVRGGNSMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGAAEIACSNAISKYADTVVGTEQYALRAFADALDDIPMALAENSGFSPISQLSAVKSRQVTEQNPHLGIDCKAKGTNDMKEQLVFETLIGKQQQLLLATQVVKMILKIDDVIMHGQYD 434
BLAST of mRNA_Ecto-sp8_S_contig1160.1948.1 vs. uniprot
Match: W7TKH6_9STRA (T-complex protein 1 subunit epsilon n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKH6_9STRA) HSP 1 Score: 642 bits (1656), Expect = 1.010e-221 Identity = 313/409 (76.53%), Postives = 364/409 (89.00%), Query Frame = 1
Query: 1 RIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNYE 1227
R+ EGF++ACQ A+ HLE IAD+V F R+N EPL TAMTTLSSKI+N+HK KMA+IAVDAV++VA+LER DVNFDMIKV+GKPGG L DTEL+ GIV+DKE SH QMPK +KDAK+ +LTCPFEPPKPKTKHKLDI+S++AYE+L+EREQ+YF+ MV+QCKD G NL+ICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATG RIVPRFSEL+ EKLG+AG VREV+FGTTK+RMLVIEDC+ S AVT+LVRGGNKMIVEEAKRSLHDAMCVVRNLIKD RIVYGGGSAEISCS+AV++ AD GV+QYA+R+FADALDDVPMALAEN+GLSPITELS VKS+QI +G +G+DC Q G DM+ Q IFETLIGKQQQ LATQ+V+M+LKIDDV+M GN++
Sbjct: 128 RMAEGFEKACQLAMAHLETIADSVSFGRENIEPLYDTAMTTLSSKIVNIHKSKMARIAVDAVLSVADLERKDVNFDMIKVEGKPGGRLEDTELVRGIVVDKEISHPQMPKTIKDAKIAILTCPFEPPKPKTKHKLDISSREAYERLYEREQEYFTTMVRQCKDSGANLIICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGGRIVPRFSELSPEKLGRAGLVREVAFGTTKERMLVIEDCAKSQAVTILVRGGNKMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEISCSIAVAKAADTETGVDQYAIRAFADALDDVPMALAENAGLSPITELSQVKSQQIKDGNPHIGVDCMQSGVADMRTQRIFETLIGKQQQFQLATQLVRMVLKIDDVLMHGNFQ 536
BLAST of mRNA_Ecto-sp8_S_contig1160.1948.1 vs. uniprot
Match: A0A7S3HCP3_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCP3_9STRA) HSP 1 Score: 640 bits (1650), Expect = 8.150e-221 Identity = 314/408 (76.96%), Postives = 368/408 (90.20%), Query Frame = 1
Query: 1 RIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 1224
RI EGF++A + A++HL+ IAD VEF++DNT PLV TAMTTLSSKIINV+K+KMA+IAVDAV++VA+L+ NDVNFDMIKV+GKPGG L +TELI GIVIDKEFSH QMPK +KDAK+C+LTCPFEPPKPKTKHK+DITSK+AY+KL++ EQ YF+ MV+QCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRFSEL+ KLG+AG VREVSFGTTK+RMLVIEDC+ S+AVTVL+RGGNKMIV+EA RSLHDAMCVVRNLIKD R+VYGGGSAEI+CS+AVS AD + G+EQYA+R+FADALDD+PMALAEN+GLSPITE++++K+RQ+AEG LG+DCNQ+G+ DMK+ +FETLIGK QQL LATQVVKMILKIDDVIM G Y
Sbjct: 128 RISEGFEQAMEVALKHLQTIADRVEFTKDNTTPLVDTAMTTLSSKIINVYKRKMAQIAVDAVLSVADLDNNDVNFDMIKVEGKPGGRLEETELIKGIVIDKEFSHPQMPKEIKDAKMCILTCPFEPPKPKTKHKMDITSKEAYDKLYKYEQDYFTTMVKQCKDSGANLVICQWGFDDEANHLLLQNGLPAVRWVGGVELELIAIATGGRIVPRFSELSEAKLGRAGTVREVSFGTTKERMLVIEDCACSNAVTVLIRGGNKMIVDEAHRSLHDAMCVVRNLIKDNRVVYGGGSAEIACSLAVSAFADTVPGIEQYAIRAFADALDDLPMALAENAGLSPITEVTSIKARQLAEGNPRLGVDCNQIGSNDMKDHLVFETLIGKMQQLQLATQVVKMILKIDDVIMYGGY 535
BLAST of mRNA_Ecto-sp8_S_contig1160.1948.1 vs. uniprot
Match: A0A7S2BNZ2_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNZ2_9STRA) HSP 1 Score: 637 bits (1644), Expect = 6.580e-220 Identity = 318/409 (77.75%), Postives = 363/409 (88.75%), Query Frame = 1
Query: 1 RIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNYE 1227
RI EGFD+AC AV+ L I+D VEF + NT PL+ TA TTLSSKIINVHK MA+IAV+AV+AVA+ E +DVNFDMIK++GKPGG+LG+TELI GIVIDK+FSH QMPK V DAK+C+LTCPFEPPKPKTKHKLDITSK+AY+KL E+EQ+YF+ MV+QCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRFSELT EKLGKAG VREV+FGT K+RMLV+EDC+NS+AVTVLVRGGN MIVEEAKRSLHDAMCVVRNLIK+ RIVYGGG+AEI+CS A++ AD+ GV+QYA+R+FADAL+D+PMALAENSGLSPIT+LSAVKSRQ+ EG LGIDC + GT DMK+Q +FETLIGKQQQLLLATQVVKMILKIDDVIM G Y+
Sbjct: 128 RISEGFDQACDIAVQTLADISDVVEFDQQNTTPLLNTAKTTLSSKIINVHKDHMAEIAVEAVLAVADFEHHDVNFDMIKMEGKPGGQLGETELIKGIVIDKDFSHPQMPKEVIDAKMCILTCPFEPPKPKTKHKLDITSKEAYDKLHEQEQEYFTQMVKQCKDSGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFSELTSEKLGKAGRVREVAFGTLKERMLVVEDCANSNAVTVLVRGGNSMIVEEAKRSLHDAMCVVRNLIKNNRIVYGGGAAEIACSNAITAQADDKTGVDQYALRAFADALEDIPMALAENSGLSPITQLSAVKSRQVTEGNPHLGIDCKRAGTNDMKDQLVFETLIGKQQQLLLATQVVKMILKIDDVIMHGAYQ 536
BLAST of mRNA_Ecto-sp8_S_contig1160.1948.1 vs. uniprot
Match: A0A482RX78_9ARCH (T-complex protein 1 subunit epsilon n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX78_9ARCH) HSP 1 Score: 627 bits (1616), Expect = 3.230e-216 Identity = 305/396 (77.02%), Postives = 355/396 (89.65%), Query Frame = 1
Query: 1 RIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMI 1188
RI EGF++A + A+ HLEKIAD VEFS+ NTEPLV AMTTLSSKI+N++K+KMA+IAVDAV++VA+L+ NDVNFDMIK++GKPGG L +TELI GIV+DKEFSH QMPK +KDAK+C+LTCPFEPPKPKTKHKLDITSK+AY KL++ EQ YF+ MV+QCKD G NLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATG RIVPRFSELT EKLGKAG VREVSFGTTK+RMLVIEDC++S+AVTVL+RGGNKMIVEEAKRSLHDAMCVVRNLIKD RIVYGGGSAEI+CS+ VS AD + G+EQYA+R+FADAL+D+PMALAENSGLSPI E+++ K+RQ++E LG+DCNQ G DMK+Q + ETLIGKQQQ+ LATQVVKM+
Sbjct: 84 RISEGFEQAAEVAIRHLEKIADRVEFSKANTEPLVDIAMTTLSSKIVNIYKRKMAQIAVDAVLSVADLDNNDVNFDMIKMEGKPGGRLEETELIKGIVVDKEFSHPQMPKTIKDAKICILTCPFEPPKPKTKHKLDITSKEAYNKLYQYEQDYFTTMVKQCKDSGANLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGGRIVPRFSELTAEKLGKAGTVREVSFGTTKERMLVIEDCASSNAVTVLIRGGNKMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEIACSLEVSAFADTVPGIEQYAIRAFADALEDIPMALAENSGLSPIAEVTSTKARQLSENNPRLGVDCNQTGNADMKQQLVLETLIGKQQQIQLATQVVKMV 479
BLAST of mRNA_Ecto-sp8_S_contig1160.1948.1 vs. uniprot
Match: A0A6T5Q400_HETAK (T-complex protein 1 subunit epsilon n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q400_HETAK) HSP 1 Score: 622 bits (1604), Expect = 7.060e-214 Identity = 308/408 (75.49%), Postives = 356/408 (87.25%), Query Frame = 1
Query: 1 RIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 1224
RI EGF+ AC AV L +IAD VEFSR+NT+ L+ TA TTLSSKIIN+HK +MA+IAV+AV++VA+LER+DVNFDMIK+ GKPGG L +TELIHGIVIDKE+SHAQMPK V+DA++C+LTCPFEPPKPKTKHKLDITS++AY++L REQ+YF MV+QCK+ G N+VICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATG RIVPRF EL EKLG+AG +REV+FGTTK+RM+VIE C+ S+AVT+LVRGGNKMIVEEAKRSLHDAMCV RNLIKD RIVYGG SAE++C++AV AD + G+EQYA+R+FADALDDVPMALAENSGL PI ELS VK+ Q+ G LG+DCNQ GT DM+EQ IFETLIGKQQQL LATQVVKMILKIDDVIM G Y
Sbjct: 128 RIAEGFELACGVAVARLAQIADRVEFSRENTDILMNTAKTTLSSKIINIHKDRMARIAVEAVLSVADLERHDVNFDMIKMTGKPGGRLEETELIHGIVIDKEWSHAQMPKEVRDARMCILTCPFEPPKPKTKHKLDITSREAYDRLHAREQEYFGTMVRQCKESGANVVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGGRIVPRFGELAPEKLGRAGLIREVAFGTTKERMMVIEQCAQSNAVTILVRGGNKMIVEEAKRSLHDAMCVTRNLIKDNRIVYGGASAEVACALAVGAHADRVLGMEQYAIRAFADALDDVPMALAENSGLQPIEELSRVKAAQVETGNPYLGVDCNQTGTNDMREQQIFETLIGKQQQLQLATQVVKMILKIDDVIMYGAY 535
BLAST of mRNA_Ecto-sp8_S_contig1160.1948.1 vs. uniprot
Match: A0A7S2PT90_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PT90_9STRA) HSP 1 Score: 618 bits (1593), Expect = 3.870e-212 Identity = 303/413 (73.37%), Postives = 363/413 (87.89%), Query Frame = 1
Query: 1 RIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGI--DCNQV---GTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 1224
R+ EGF++AC+ A+ L +IAD +EFS+D+ EPL+TTAMTTL+SKIINV K+KMA+IAV+AV+ VA+LER DVNFDMI+ +GKPGG L DTEL++G+ IDKE SH QM K +KDAK+C+LTCPFEPP+PKTKH LDITSK+AYEKL+E+EQKYF+DMV+Q KD G NLVICQWGFDDEANHLLLQN LPA+RWVGG+E+E IAIATG RIVPRFSELT EKLGKAG VREVSFGT+K++M+VIE CSNS+AVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKD RIVYGGGSAE++C +AVS+ A+ + GV+QYA+R FADALDD+P+ALAEN+GLSPI E++A+KSRQ++EG +G+ DC Q T DM+EQG+FETL+GKQQQL LATQVVKMILKIDDVI+ G Y
Sbjct: 128 RVAEGFEKACEVAISTLGEIADTIEFSKDDIEPLMTTAMTTLNSKIINVSKRKMAEIAVNAVLCVADLERKDVNFDMIRTEGKPGGCLEDTELVNGLAIDKEISHPQMAKEIKDAKICILTCPFEPPRPKTKHHLDITSKEAYEKLYEQEQKYFTDMVKQVKDSGANLVICQWGFDDEANHLLLQNDLPAIRWVGGIEIEHIAIATGGRIVPRFSELTPEKLGKAGLVREVSFGTSKEKMIVIEGCSNSNAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEVACGIAVSKYAESVVGVDQYAIRGFADALDDIPLALAENAGLSPIEEVAAIKSRQLSEGNPRIGVGVDCVQTDGRSTIDMREQGVFETLVGKQQQLQLATQVVKMILKIDDVILSGQY 540
BLAST of mRNA_Ecto-sp8_S_contig1160.1948.1 vs. uniprot
Match: A0A7S2UFZ6_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UFZ6_9STRA) HSP 1 Score: 617 bits (1592), Expect = 5.880e-212 Identity = 305/415 (73.49%), Postives = 366/415 (88.19%), Query Frame = 1
Query: 1 RIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVG------TCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNYE 1227
R+ EG+++A + A++ LE+IAD V FS+DN EPLV TAMTTL+SKIINVHK+KMA+IAV+AV+ VA+++R+DVNFDMI+++GK GG L DTEL++GIVIDK+FSH QM KVVKDAK+C+LTCPFEPPKPKTKHKLDI SK+AY+KL++ EQ YF +MVQQ KD G N+VICQWGFDDEANHLLLQN LPAVRWVGGVE+E IAIATG RIVPRFSEL+ EKLG+AG VREVSFGTTK+RMLVIEDC+NS+AVTVLVRGGNKM+VEEAKRSLHDAMCVVRNLIKD R+VYGGGSAEI+CS+AVS+ A+ + GV+QYA+R+FADALDD+P+ALAEN+GLSPI EL+A KSRQI EG + +G+ +QV + DM++ G+FETLIGKQQQL LATQVVKMILKIDDVI MG Y+
Sbjct: 128 RVAEGYEKAAEVAIKTLEEIADRVAFSKDNVEPLVATAMTTLNSKIINVHKRKMAEIAVNAVLGVADIDRHDVNFDMIRLEGKAGGSLEDTELVNGIVIDKDFSHPQMAKVVKDAKMCILTCPFEPPKPKTKHKLDINSKEAYDKLYKYEQDYFKEMVQQVKDSGANMVICQWGFDDEANHLLLQNGLPAVRWVGGVEIEHIAIATGGRIVPRFSELSAEKLGRAGTVREVSFGTTKERMLVIEDCANSNAVTVLVRGGNKMVVEEAKRSLHDAMCVVRNLIKDNRVVYGGGSAEIACSIAVSKYAETMVGVDQYAIRAFADALDDIPLALAENAGLSPIEELAAAKSRQIREGSSVIGLGLDQVSEIDDDHSWDMRKLGVFETLIGKQQQLQLATQVVKMILKIDDVISMGQYQ 542 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1160.1948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1160.1948.1 >prot_Ecto-sp8_S_contig1160.1948.1 ID=prot_Ecto-sp8_S_contig1160.1948.1|Name=mRNA_Ecto-sp8_S_contig1160.1948.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=372bp MTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELback to top mRNA from alignment at Ecto-sp8_S_contig1160:1..7550+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1160.1948.1 ID=mRNA_Ecto-sp8_S_contig1160.1948.1|Name=mRNA_Ecto-sp8_S_contig1160.1948.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=7550bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1160:1..7550+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1160:1..7550+ >mRNA_Ecto-sp8_S_contig1160.1948.1 ID=mRNA_Ecto-sp8_S_contig1160.1948.1|Name=mRNA_Ecto-sp8_S_contig1160.1948.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1116bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1160:1..7550+ (Ectocarpus species8 EcLAC_412)back to top |