mRNA_Ecto-sp8_S_contig11587.1935.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11587.1935.1 vs. uniprot
Match: A0A6H5KRH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH3_9PHAE) HSP 1 Score: 1218 bits (3152), Expect = 0.000e+0 Identity = 691/796 (86.81%), Postives = 701/796 (88.07%), Query Frame = 1
Query: 43 MDNGREAGTSESFEPVIAASGRSTWNGXXXXXXXCGSTSSGRSSGSTDRGDPQAGSDVLLQQPQEQRQRQAQRVDGSNVQQHDQQANAPIMKHLPGEEKSGENGAGGDDSSSRCNEKEEERREVGWAPTTTNKFSPMAETAAASFVLKADDSAQAKDNAGKRVLSLTRYSSMPLLSAGPHSPHKRGSSAGASLTPLLGPNEPTQHDQQELQQRRHQPQQHNMVLMTPRRGGRGTATTTPNSRPRNRKMPSMLGMLQNAQDQAASPVSALSSNSHYLSDGSLVVGAGDDEPSATAATADRGATAGNDPAGPKRTSRRMNMVSFGXXXXXXXXXXPAAGNKGGERPLLTPLSINRTPNFYHEEATPAVGPTKRLRDKSVRFIQRLPGPRLLMQVLEEEIDPKNVRLTTQSEPVILMEVMPAALVVSLLVLTYLVFACGVVLIVRFHLRGTSTLAMGPGAGNGAGELCAWGSSSTSTVTTSRGEGDIFIIGAEGPDPHSPSAAGCTVLSPGLSELSLDSPLLSSSSSTSSSLMDADEERYGAVFSGQFSGMTDLSGSVSLHVSFADSEVQESLPDPATVDIALEACAAGVTAGVRDSTNQPVLEWGVCEEGWQPVLFQEDISARVRSLPENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTTXXXXXXXXSGSTEEPFSLGEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFQNALHERKWLAFMGLAVALYLNPIMVVGNFVAPGSASWGLASEMSLSVAVAVFLVVALCIADGVGK 2430
MDNGREAGTSESFEPVIAASGRS WN XXXXXXX TDRGDPQAGSDVLLQQPQEQRQ+QAQRVD SNVQQ DQQ APIMKHLPGEEKS ENGAGG+DSSSRCNEK EERREVGWAPTTTNKFSPMAETAAASFVLKADDSAQ KD+AGKRV SLTRY+SMPLLSAGPHS HKRGSSAGASLT LLGPNEPT H TPRRGGRGTATTTPNSRPRNRKMPSMLGMLQNAQDQAASPVS LSSNSH+LSD SLVVGA DRGATAGNDPAGP+ TS XXXXXXXXXX AGNKGGERPLLTPLSINRTPNFYHEE TPAVGPTKRLRDKSVRFIQRLPGPRLLMQVLEEEIDPKNVRLTTQSEPVILMEVMPAALVVSLLVLTYLVFACGVVLIVRFHLRGTSTLAMGPGAGNGAGELCAWGSSST+TVTTS GEGDIFIIGA+GPDPHSPSAAGCTV SPGLSELSLDSPLLSSSSSTSSSL DADEERYGAVFSGQFSGMTDLSGSVSLHVSFAD+EVQESLPDPATVDIALEAC AGVTAGV DST Q VLEWGVCEEGWQPVL LPENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSST XXXXXXXX TEEPFSL EARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGF+NALHERKWLAFMGLAVALYLNPIMVVGNFVAPGSASWGLASEMSLSVAVAVFLVVALCIADGVGK
Sbjct: 1 MDNGREAGTSESFEPVIAASGRSLWNXXXXXXXXXXXXXXXXXXXXTDRGDPQAGSDVLLQQPQEQRQQQAQRVDDSNVQQQDQQTKAPIMKHLPGEEKSSENGAGGEDSSSRCNEKGEERREVGWAPTTTNKFSPMAETAAASFVLKADDSAQVKDDAGKRVSSLTRYTSMPLLSAGPHSSHKRGSSAGASLTSLLGPNEPTHHXXXXXXXXXXXXXXXXXXXXTPRRGGRGTATTTPNSRPRNRKMPSMLGMLQNAQDQAASPVSTLSSNSHFLSDSSLVVGAXXXXXXXXXXXXDRGATAGNDPAGPRSTSXXXXXXXXXXXXXXXXXXXXXAGNKGGERPLLTPLSINRTPNFYHEETTPAVGPTKRLRDKSVRFIQRLPGPRLLMQVLEEEIDPKNVRLTTQSEPVILMEVMPAALVVSLLVLTYLVFACGVVLIVRFHLRGTSTLAMGPGAGNGAGELCAWGSSSTATVTTSGGEGDIFIIGADGPDPHSPSAAGCTVRSPGLSELSLDSPLLSSSSSTSSSLTDADEERYGAVFSGQFSGMTDLSGSVSLHVSFADTEVQESLPDPATVDIALEACVAGVTAGVGDSTGQAVLEWGVCEEGWQPVL-----------LPENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTXXXXXXXXXXXXTEEPFSLSEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFKNALHERKWLAFMGLAVALYLNPIMVVGNFVAPGSASWGLASEMSLSVAVAVFLVVALCIADGVGK 785
BLAST of mRNA_Ecto-sp8_S_contig11587.1935.1 vs. uniprot
Match: D8LEN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN2_ECTSI) HSP 1 Score: 1090 bits (2819), Expect = 0.000e+0 Identity = 596/660 (90.30%), Postives = 600/660 (90.91%), Query Frame = 1
Query: 451 MAETAAASFVLKADDSAQAKDNAGKRVLSLTRYSSMPLLSAGPHSPHKRGSSAGASLTPLLGPNEPTQHDQQELQQRRHQPQQHNMVLMTPRRGGRGTATTTPNSRPRNRKMPSMLGMLQNAQDQAASPVSALSSNSHYLSDGSLVVGAGDDEPSATAATADRGATAGNDPAGPKRTSRRMNMVSFGXXXXXXXXXXPAAGNKGGERPLLTPLSINRTPNFYHEEATPAVGPTKRLRDKSVRFIQRLPGPRLLMQVLEEEIDPKNVRLTTQSEPVILMEVMPAALVVSLLVLTYLVFACGVVLIVRFHLRGTSTLAMGPGAGNGAGELCAWGSSSTSTVTTSRGEGDIFIIGAEGPDPHSPSAAGCTVLSPGLSELSLDSPLLSSSSSTSSSLMDADEERYGAVFSGQFSGMTDLSGSVSLHVSFADSEVQESLPDPATVDIALEACAAGVTAGVRDSTNQPVLEWGVCEEGWQPVLFQEDISARVRSLPENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTTXXXXXXXXSGSTEEPFSLGEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFQNALHERKWLAFMGLAVALYLNPIMVVGNFVAPGSASWGLASEMSLSVAVAVFLVVALCIADGVGK 2430
MAE AAASFVLKADDSAQAKDNAGKRV SLTR+SSMPLLSAGPHS HKRGSSAGASLTPLLGPNEPTQHDQQ QQRRHQPQQHNMVLMTPRRGGRGTATTTPNSRPRNRKMPSMLGMLQNAQDQAASPVSALSSNSHYLSDGSLVVGAGD+E SA AATADRGATAGNDPAGPKRTSRRMNM EATPAVGPTKRLRDKSVRFIQRLPGPRLLMQVLEEEIDPKNVRLTTQSEPVILMEVMPAALVVSLLVLTYLVFACGVVLIVRFHLRGTSTL MGPGAGNGAGELCAWGSS SRGEGDIFIIGAEGPDPHSPSAAGCTVLSPGLSELSLDSPLLSSSSSTSSSL DADEERYGAVFSGQFSGMTDLSGSVSLHVSFAD+EVQESLPDPATVDIALEACAAGVTAGVRDSTNQ VLEWGVCEEGWQPVLFQEDISARVRSLPENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTTXXXXXXXXSGSTEEPFSL EARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGF+NALHERKWLAFMGLAVALYLNPIMVVGNFVAPGSASWGLASEMSLSVAVAVFLVVALCIADGV K
Sbjct: 1 MAEAAAASFVLKADDSAQAKDNAGKRVSSLTRHSSMPLLSAGPHSSHKRGSSAGASLTPLLGPNEPTQHDQQGQQQRRHQPQQHNMVLMTPRRGGRGTATTTPNSRPRNRKMPSMLGMLQNAQDQAASPVSALSSNSHYLSDGSLVVGAGDNESSAAAATADRGATAGNDPAGPKRTSRRMNM-----------------------------------------EATPAVGPTKRLRDKSVRFIQRLPGPRLLMQVLEEEIDPKNVRLTTQSEPVILMEVMPAALVVSLLVLTYLVFACGVVLIVRFHLRGTSTLTMGPGAGNGAGELCAWGSSXXXXXXXSRGEGDIFIIGAEGPDPHSPSAAGCTVLSPGLSELSLDSPLLSSSSSTSSSLTDADEERYGAVFSGQFSGMTDLSGSVSLHVSFADTEVQESLPDPATVDIALEACAAGVTAGVRDSTNQAVLEWGVCEEGWQPVLFQEDISARVRSLPENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTTXXXXXXXXSGSTEEPFSLSEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFKNALHERKWLAFMGLAVALYLNPIMVVGNFVAPGSASWGLASEMSLSVAVAVFLVVALCIADGVAK 619
BLAST of mRNA_Ecto-sp8_S_contig11587.1935.1 vs. uniprot
Match: D7G0U2_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U2_ECTSI) HSP 1 Score: 728 bits (1879), Expect = 2.780e-245 Identity = 405/554 (73.10%), Postives = 436/554 (78.70%), Query Frame = 1
Query: 784 MPSMLGMLQNAQDQAASPVSALSSNSHYLSDGSLVVGAGDDEPSATAATADRGATAGNDPAGPKRTSRRMNMVSFGXXXXXXXXXX---PAAG-NKGGERPLLTPLSINRTPNFYHEEATPAVGPTKRLRDKSVRFIQRLPGPRLLMQVLEEEIDPKNVRLTTQSEPVILMEVMPAALVVSLLVLTYLVFACGVVLIVRFHLRGTSTLAMGPGAGNGAGELCAWGSSSTSTVTTSRGEGDIFIIGAEGPDPHSPSAAGCTVLSPGLSELSLDSPLLSSSSSTSSSLMDADEERYGAVFSGQFSGMTDLSGSVSLHVSFADSEVQESLPDPATVDIALEACAAGVTAGVRDSTNQPVLEWGVCEEGWQPVLFQEDISARVRSLPENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTTXXXXXXXXSGSTEEPFS-LGEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFQNALHERKWLAFMGLAVALYLNPIMVVGNFVAPGSASWGLASEMSLSVAVAVFLVVALCIADGVGK 2430
MPSMLGMLQNAQDQAASP + NS GSL VG GD E SA AA +D +T GND AG K TSRRM +V G PAA NKG ER L L INRTP HEEA VG +RLR SVR IQRLPGP+LLMQVLE EIDPKNVRLTTQSEPVILMEVMPAALV+SLL LTYLVF V++IV FHLRGT+TLAMGPG+G GA ELC SST+TVTTS GE D+FIIGA+GPDP+SPSAAGCTV SPGLSELSLDSPLLSSSS TSSSL DA EERYGAVFSGQFSGMTDL G VSLHVSFAD+EVQESLPDPA VDIALEAC AGV A V +S++Q LEWG CEEGW PVLFQE+ISARVRSLPENRGYT+FNFYQNQ+TI GQALVRQYRVQVGFVS+T SGS EE FS + EA+WSLEYETGAT EWAK VLAVVL+CWVPVWLAWCWTVFYK E GF+NALHERKWLA +GL+V YLNPI VVGNF P SASWGLASEM SVAV +FLVV LCIA GV +
Sbjct: 1 MPSMLGMLQNAQDQAASPPVS-PRNSRCPGGGSLFVGKGDGESSAAAAISDGDSTGGNDLAGHKHTSRRMGLVGLGGGREASRKNPTPVPAAAVNKGRERSPLASLPINRTPTVDHEEAPRLVGTIRRLRQNSVRIIQRLPGPKLLMQVLEGEIDPKNVRLTTQSEPVILMEVMPAALVISLLALTYLVFTSSVLIIVWFHLRGTTTLAMGPGSGEGAAELCVRSPSSTATVTTSGGETDVFIIGADGPDPYSPSAAGCTVFSPGLSELSLDSPLLSSSSPTSSSLTDA-EERYGAVFSGQFSGMTDLFGIVSLHVSFADTEVQESLPDPAPVDIALEACVAGVAAAVGESSSQADLEWGTCEEGWLPVLFQENISARVRSLPENRGYTLFNFYQNQDTIWGQALVRQYRVQVGFVSTTASSSSTGGSSGSAEESFSWVSEAKWSLEYETGATTEWAKSVLAVVLMCWVPVWLAWCWTVFYKTSEKGFKNALHERKWLASLGLSVVFYLNPIKVVGNFAFPESASWGLASEMCFSVAVVMFLVVGLCIAGGVSR 552
BLAST of mRNA_Ecto-sp8_S_contig11587.1935.1 vs. uniprot
Match: A0A6H5KPV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV3_9PHAE) HSP 1 Score: 492 bits (1266), Expect = 7.010e-161 Identity = 346/758 (45.65%), Postives = 381/758 (50.26%), Query Frame = 1
Query: 556 MPLLSAGPHSPHKRGSSAGASLTPLLGPNEPTQHDQQELQQRRHQPQQHNMVLMTPRRGGRGTATTTPNSRPRNRKMPSMLGMLQNAQDQAASPVSALSSNSHYLSDGSLVVGAGDDEPSATAATADRGATAGNDPAGPKRTSRRMNMVSFGXXXXXXXXXX---PAAG--NKGGERPLLTPLSINRTPNFYHEEATPAVGPTKRLRDKSVRFIQRLPGPRLLMQV---------------------------------------------------------------------------------------------------------------------LEEEIDPKNVRLTTQSEPVILMEVMPAALVVSLLVLTYLVFACGVVLIVRFHLRGTSTLAMGPGAGNGAGELCAWGSSSTSTVTTSRGEGDIFIIGAEGPDPHSPSAAGCTVLSPGLSELSLDSPLLSSSSSTSSSLMDADEERYGAVFSGQFSGMTDLSGSVSLHVSFADSEVQESLPDPATVDIALEACAAGVTAGVRDSTNQPVLEWGVCEEGWQPVLFQEDISARVRSLPENRGYTMFNFYQNQETIRGQALVRQYRVQV---------------------------GFVSSTTXXXXXXXXSGSTEEPFS-LGEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFQNALHERKWLAFMGLAVALYLNPIMVVGNFVAPGSASWGLASEMSLSVA 2379
MP+LSAGPH H GSS G SLT L N + + ++RR++ Q+HNM TPR GGR TT PNSRPR RKMPSMLGMLQNAQDQAASP GD E SATAA +D GAT GND AG + TSRR+ +V G PAA NKG ER L L I+RTP HEEA VG RLR SVR IQRLPGP+LLMQV L E IDPKNVRLTTQSEPVILMEVMPAALV+SLL LTYLVFA V LIV FHLRGT+TLA+GPG+G GA ELCA SSST T+TTS GEGD+FIIGA GPDPHSPSAAGCTV SPGLS LSLDSP+LSSSSSTSSSL DA+E L ENRGYT+FNFYQNQ+TI GQALVRQYRVQV GFVS+T S S EE FS + EA WSLEYE+GAT EW KIVLAV+L+CWVPVWLAWC TVFYK+ E GF+NA HERKWL+ +GL+V YLNPI VVGNF +P SASW L SEM SVA
Sbjct: 1 MPVLSAGPHFSHNPGSSTGGSLTSLFRLNNKPKQQEGPPRRRRYR-QEHNMDSWTPRTGGRDIDTTPPNSRPRVRKMPSMLGMLQNAQDQAASPP-------------------GDGESSATAAISDGGATGGNDLAGHQLTSRRIGVVDLGGGREASRRNPTPVPAAAVVNKGRERSPLPSLPISRTPTVDHEEAPRLVGTLWRLRQISVRIIQRLPGPKLLMQVSPILSVGFRRRSQVIPERNLNTTYDQQVFEVHHWAIATRVLWNRCFRGGQHTNRAHACVMDRKLVNPLNTLCKSHPTRRLAFLNKRFIGDSILPIRPFVLGPPPRKHDSSVKTLATVLGEAIDPKNVRLTTQSEPVILMEVMPAALVISLLALTYLVFASSVFLIVWFHLRGTTTLAVGPGSGEGAAELCARRSSSTVTITTSGGEGDVFIIGAHGPDPHSPSAAGCTVFSPGLSGLSLDSPILSSSSSTSSSLTDAEER-----------------------------------------------------------------------------------------LAENRGYTLFNFYQNQDTIWGQALVRQYRVQVCSHPVSGRFRLSLRAFAHRHHPWIVHVGFVSTTASSSSTGGSSDSAEESFSWVSEAMWSLEYESGATTEWEKIVLAVLLMCWVPVWLAWCLTVFYKSSERGFKNAWHERKWLSSLGLSVVFYLNPIKVVGNFASPESASWDLTSEMCFSVA 649
BLAST of mRNA_Ecto-sp8_S_contig11587.1935.1 vs. uniprot
Match: D8LEN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN4_ECTSI) HSP 1 Score: 386 bits (991), Expect = 6.820e-113 Identity = 221/387 (57.11%), Postives = 248/387 (64.08%), Query Frame = 1
Query: 1282 MEVMPAALVVSLLVLTYLVFACGVVLIVRFHLRGTSTLAMGPGAGNGAGELCAWGSSSTSTVTTSRGEGDIF--IIGAEGP-DPHSPSAAGCTVLSPGLSELSLDSPLLSSSSSTSSSLMDADEERYGAVFSGQFSGMTDLSGSVSLHVSFADSEVQESLPDPATVDIALEACAAGVTAGVRDSTNQPVLEWGVCEEGWQPVLFQEDISARVRSLPENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTTXXXXXXXXSGSTEEPFS-LGEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFQNALHERKWLAFMGLAVALYLNPIMVVGNFVAPGSASWGLASEMSLSVAVAVFLVVALCIADGVGK 2430
MEVMPAALV+SLLVLTYLVFACGVVLIVRFHLRGTSTL MGPGAGNGAG + G +F + G +GP P+ C +S S R+G V C AGVTA V +S+ Q LEWG CE GWQPVLFQE+ISARVRSLPENR Y +FNF+QNQ+TIRGQALVRQYRVQV FVS+TT SGS E FS + EARWSLEYETGAT EWAKI+LAVVL+CW+PVWLAWCW VFY++ EGGF+NALHER+WL +GL+V LYLNPI VVGNFVAPGSASWGLASEMSLSVA A+ LVV LCIADGVG+
Sbjct: 1 MEVMPAALVISLLVLTYLVFACGVVLIVRFHLRGTSTLTMGPGAGNGAGAV----------------RGGVFRPVFGHDGPIRERIPARIICRHRGTRVSARPGHSG-----------------HRFGGV------------------------------------------CVAGVTAEVGESSTQAELEWGTCEGGWQPVLFQENISARVRSLPENRAYALFNFHQNQDTIRGQALVRQYRVQVDFVSTTTSSSSTGDSSGSAERSFSWVREARWSLEYETGATTEWAKIILAVVLLCWLPVWLAWCWAVFYRSAEGGFKNALHERRWLELIGLSVVLYLNPIKVVGNFVAPGSASWGLASEMSLSVAEAMLLVVTLCIADGVGR 312
BLAST of mRNA_Ecto-sp8_S_contig11587.1935.1 vs. uniprot
Match: A0A6H5JIC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC3_9PHAE) HSP 1 Score: 280 bits (715), Expect = 1.070e-76 Identity = 196/441 (44.44%), Postives = 256/441 (58.05%), Query Frame = 1
Query: 1183 QRLPGPRLLMQVLEEEIDPKNVRLTTQSEPVILMEVMPAALVVSLLVLTYLVFACGVVLIVRFHLRGTSTLAM------------GPGAGNGAGELCAWGSSSTSTVTTSRGEGDIFIIGAEGPDPH-SPSAAGCTVLSPGLSELSLDSPLLSSSSSTSSSLMDADEE---RYGAVFSGQFSGMTDLSGSVSLHVSFADSE---VQESLPDPATVDIALEACAAGVTAGVRDSTNQPVLEWGVCEEGWQPVLFQEDI--SARVRSLPENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTTXXXXXXXXSGSTEEPFS-LGEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFQNA--LHERKWLAFMGLAVALYLNPIMVVGNFV-APGSASWGLASEMSLSVAVAVFLVVALCIADGVGK 2430
+R P PR +++ L+EE++ +N LT QS+P+IL EV+PA V SL + T V+A G+ L++ LRG+STL++ G+ GAG +C GS +TS A GPDP + SA+GCT LSP S +S L SS E+ RYGAVFSG F+G+T L GSVSL +F D + ++LP+P VD+ +EAC AG WG CE GWQPVLFQED+ S+ V +RGY +FNF QNQET+RG+A++ QYRV VGFVS+T+ S S+E FS L ARW+L YET + + +A L WV L WC VF + +GGF++ E K LAF+GL+VALYL VGN APGSASWGLASEM S+A AVFLV ALC+ADG+ +
Sbjct: 594 ERFPRPRQILEALQEELELQNPGLTAQSKPIILAEVLPAVAVTSLALCTLAVYAVGIALVLTGMLRGSSTLSVPWAYEDGSSISISSGSAYGAGNVC--GSDATSAA-------------AAGPDPSGAASASGCTDLSP-----SAESLLSYSSXXXXXXXXXXTEQQRARYGAVFSGDFAGLTGLYGSVSLRAAFTDEATLGLVDALPEPVVVDVTVEACTAGAAGA-----------WGECEGGWQPVLFQEDVAVSSGVGLPSSDRGYEIFNFRQNQETVRGEAIIHQYRVLVGFVSTTSST------STSSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGCLWWCHAVFRR--QGGFEDGGPQFEHKCLAFVGLSVALYL-----VGNLRGAPGSASWGLASEMLRSLAAAVFLVAALCMADGISR 990
BLAST of mRNA_Ecto-sp8_S_contig11587.1935.1 vs. uniprot
Match: D8LRA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA0_ECTSI) HSP 1 Score: 222 bits (565), Expect = 1.570e-56 Identity = 136/270 (50.37%), Postives = 170/270 (62.96%), Query Frame = 1
Query: 1648 RYGAVFSGQFSGMTDLSGSVSLHVSFADSE---VQESLPDPATVDIALEACAAGVTAGVRDSTNQPVLEWGVCEEGWQPVLFQEDISARVR-SLP-ENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTTXXXXXXXXSGSTEEPFS-LGEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFQNA--LHERKWLAFMGLAVALYLNPIMVVGNFV-APGSASWGLASEMSLSVAVAVFLVVALCIADGVGK 2430
RY AVFSG F+G+ L GSVSL +F D + ++LP+PA VD+ +EAC AG WG CE GWQPVLFQED+S LP +RGY +FNF QNQET+RG+A+++QYRV VGFVS+T+ S S+E FS L ARW+L YET + + +A L WV WL+WC VF + EGGF++ E K LAF GL+VALYL VG+ APGSASWGLASEM S+A AVFLV ALC+ADG+ +
Sbjct: 499 RYAAVFSGDFAGLAGLYGSVSLRAAFTDEATVALVDALPEPAVVDLMVEACTAGAAGA-----------WGECEGGWQPVLFQEDVSVSSGVGLPLSDRGYEIFNFRQNQETVRGEAIIQQYRVLVGFVSTTSST------STSSEADFSGLTTARWTLTYETRGAGRGSGVAMACALGLWVVGWLSWCHAVFRRR-EGGFEDGGPHFEHKCLAFAGLSVALYL-----VGSLRGAPGSASWGLASEMMRSLAAAVFLVAALCMADGIPR 745 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11587.1935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11587.1935.1 >prot_Ecto-sp8_S_contig11587.1935.1 ID=prot_Ecto-sp8_S_contig11587.1935.1|Name=mRNA_Ecto-sp8_S_contig11587.1935.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=810bp PYTSRGRGGGYAAVMDNGREAGTSESFEPVIAASGRSTWNGRSTSNGRCGback to top mRNA from alignment at Ecto-sp8_S_contig11587:1906..5535+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11587.1935.1 ID=mRNA_Ecto-sp8_S_contig11587.1935.1|Name=mRNA_Ecto-sp8_S_contig11587.1935.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3630bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11587:1906..5535+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11587:1906..5535+ >mRNA_Ecto-sp8_S_contig11587.1935.1 ID=mRNA_Ecto-sp8_S_contig11587.1935.1|Name=mRNA_Ecto-sp8_S_contig11587.1935.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2430bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11587:1906..5535+ (Ectocarpus species8 EcLAC_412)back to top |