mRNA_Ecto-sp8_S_contig11560.1915.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig11560.1915.1
Unique NamemRNA_Ecto-sp8_S_contig11560.1915.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig11560.1915.1 vs. uniprot
Match: D8LTY7_ECTSI (Malate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTY7_ECTSI)

HSP 1 Score: 965 bits (2494), Expect = 0.000e+0
Identity = 477/494 (96.56%), Postives = 481/494 (97.37%), Query Frame = 1
Query:   13 RSDPRRQKEFDAGVLPDFLPETKHIRDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQFNLRDAARRDISYVSPDTGKHYGLTKDAKLAVLLVRPRGWHLDEAHVTVDGRPLSGALFDFGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPVGTIRATALLETITAAFEMEEMLYELRDHSGGLNCGRWDYIFSYIKKMRAHADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNPKLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQLSFVPECSVSAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHAASTSDGIEITPRLVQDIAERATHKLLSASGXXXXXXKFRLAGRLTANMMTAPELDDFLTSVAYPHIVNISHGRL 1494
            R+   RQKEFDAGVLPDFLPET+H+RDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQ NLRDAARRDISYVSPDTGKHYGLTK AKLAVLLVRPRGWHLDEAHVT+DGRPLSGALFDFGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPVGTIRATALLETITAAFEMEEMLYELRDHS GLNCGRWDYIFSYIKKMRAHADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNPKLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQLSFVPECSVSAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHH ASTSDGIEITPRLVQDIAERATHKLLSASG      KFRLAGRLTANMMTAPELDDFLTSVAYPHIVNISHGRL
Sbjct:   42 RARETRQKEFDAGVLPDFLPETRHVRDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQLNLRDAARRDISYVSPDTGKHYGLTKGAKLAVLLVRPRGWHLDEAHVTIDGRPLSGALFDFGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPVGTIRATALLETITAAFEMEEMLYELRDHSSGLNCGRWDYIFSYIKKMRAHADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNPKLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQLSFVPECSVSAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDIAERATHKLLSASGGDGGG-KFRLAGRLTANMMTAPELDDFLTSVAYPHIVNISHGRL 534          
BLAST of mRNA_Ecto-sp8_S_contig11560.1915.1 vs. uniprot
Match: A0A1V9ZCF1_9STRA (Malate synthase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCF1_9STRA)

HSP 1 Score: 617 bits (1591), Expect = 7.200e-217
Identity = 307/487 (63.04%), Postives = 365/487 (74.95%), Query Frame = 1
Query:   28 RQKEFDAGVLPDFLPETKHIRDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQFNLRDAARRDISYVSPDTGKHYGLTKDAKLAVLLVRPRGWHLDEAHVTVDGRPLSGALFDFGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPVGTIRATALLETITAAFEMEEMLYELRDHSGGLNCGRWDYIFSYIKKMRAHADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNPKLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQLSFVPECS--VSAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHAASTSDGIEITPRLVQDIAERATHKLLSASGXXXXXXKFRLAGRLTANMMTAPELDDFLTSVAYPHIVNIS 1482
            RQ E DAG  P FLPETK+IR+  +W+VA  P DL DRRVEITGPVDRKMVINGLNSGA  YMAD EDSS+PTW  +V GQ NLRDA RR ISYV P T K Y L +  K A LLVRPRGWHLDEAHVTV G  +SG++FDF LYFFHNV  L  RG+ PYFY+ KLESHLEARLWND+FV AQ+ LG+PVGTIRAT L+ETI A +EMEE+L+EL+DHS GLNCGRWDYIFS+IKK R H + V P+R  + M  PFM AYV+LLI TCH RGA AMGGMAAQIPVKN+P L A+ + +VK+DKLRE KAGHDGTWVAHP LV++AM++FNE MP  NQ+S +PE    V   DL+  P G  IT  GLEEN++V + Y E+WLRGNGCIP++ KMEDAATAEISR QVWQW+ H  ST D ++IT   +  I E  T + +SA+G      K+ LA ++  N +T    DDFLT   YPH+V+++
Sbjct:   30 RQAELDAGKFPTFLPETKYIRES-AWKVASIPKDLEDRRVEITGPVDRKMVINGLNSGAKCYMADLEDSSSPTWNTIVSGQINLRDAVRRTISYVQPSTRKQYALNE--KTATLLVRPRGWHLDEAHVTVHGEIVSGSIFDFALYFFHNVHELRLRGSAPYFYLPKLESHLEARLWNDIFVAAQRYLGIPVGTIRATVLIETILAGYEMEEILFELKDHSSGLNCGRWDYIFSFIKKFRNHPEFVLPDRAAVGMTTPFMAAYVKLLINTCHRRGAHAMGGMAAQIPVKNDPALNAKFMAAVKEDKLREAKAGHDGTWVAHPGLVSIAMDVFNEVMPTSNQISVLPEEGKHVQGADLIAVPSG-PITSAGLEENIDVSLVYTEAWLRGNGCIPLHNKMEDAATAEISRVQVWQWLRHGRSTEDKVKITKERILQILENCTKQRISAAGTTH---KYELAQQVMINALTGDVFDDFLTLPCYPHVVSLA 509          
BLAST of mRNA_Ecto-sp8_S_contig11560.1915.1 vs. uniprot
Match: A0A1V9ZVL8_9STRA (Malate synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVL8_9STRA)

HSP 1 Score: 607 bits (1566), Expect = 9.810e-213
Identity = 304/486 (62.55%), Postives = 365/486 (75.10%), Query Frame = 1
Query:   28 RQKEFDAGVLPDFLPETKHIRDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQFNLRDAARRDISYVSPDTGKHYGLTKDAKLAVLLVRPRGWHLDEAHVTVDGRPLSGALFDFGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPVGTIRATALLETITAAFEMEEMLYELRDHSGGLNCGRWDYIFSYIKKMRAHADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNPKLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQLSFVPECS--VSAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHAASTSDGIEITPRLVQDIAERATHKLLSASGXXXXXXKFRLAGRLTANMMTAPELDDFLTSVAYPHIVNI 1479
            RQ+  D GV P FLPETK++R+   W+VA  PADL DRRVEITGPVDRKMVINGLNSGA  YMADFEDS++P W  +V GQ NL+DA R+ ISY  P +GK Y L  +A  A LLVRPRGWHLDEAHVTV+G+ LSG+LFDFGLYFFHN   L  R +G YFY+ KLESHLEARLWNDVFV AQ  LG+P GTIRAT L+ETI A FEMEE+L+EL++HS GLNCGRWDYIFSYIKK R H + V P+R  + M  PFM +YV+LLI TCH RGA AMGGMAAQIPVKN+P L A+ + +VK+DKLRE  AGHDGTWVAHP LV++AM++FN+ MP PNQ+S +PE    V+A DL+  P G  I+  GLEEN++V + Y E+WLRGNGCIP++ KMEDAATAEISR QVWQW+ H  STSDG  IT +LV DI    T K  +A+       K++LA  +  N++T  + + FLT   YPHIV +
Sbjct:   47 RQRALDNGVFPTFLPETKYVRES-EWKVASIPADLADRRVEITGPVDRKMVINGLNSGAKCYMADFEDSTSPVWHTLVSGQINLKDAVRKTISYTQPGSGKKYSL--NATTATLLVRPRGWHLDEAHVTVNGQILSGSLFDFGLYFFHNARELALRNSGAYFYLPKLESHLEARLWNDVFVAAQNYLGIPTGTIRATVLIETILAVFEMEEILFELKEHSSGLNCGRWDYIFSYIKKFRNHPEFVLPDRAEIGMTTPFMASYVKLLINTCHRRGAHAMGGMAAQIPVKNDPALNAKFMGAVKEDKLREANAGHDGTWVAHPGLVSIAMDVFNQVMPTPNQISRIPEEGKFVTAADLIAIPKGN-ISYTGLEENIDVSLVYTEAWLRGNGCIPLHNKMEDAATAEISRVQVWQWLRHNRSTSDGKVITKQLVLDILASCTQKRAAAT---KGANKYQLAHDILVNVLTGDKFEAFLTLPCYPHIVTL 525          
BLAST of mRNA_Ecto-sp8_S_contig11560.1915.1 vs. uniprot
Match: A0A5D6XJD5_9STRA (Malate synthase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJD5_9STRA)

HSP 1 Score: 607 bits (1564), Expect = 2.350e-212
Identity = 302/487 (62.01%), Postives = 367/487 (75.36%), Query Frame = 1
Query:   25 RRQKEFDAGVLPDFLPETKHIRDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQFNLRDAARRDISYVSPDTGKHYGLTKDAKLAVLLVRPRGWHLDEAHVTVDGRPLSGALFDFGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPVGTIRATALLETITAAFEMEEMLYELRDHSGGLNCGRWDYIFSYIKKMRAHADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNPKLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQLSFVPECS--VSAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHAASTSDGIEITPRLVQDIAER--ATHKLLSASGXXXXXXKFRLAGRLTANMMTAPELDDFLTSVAYPHIV 1473
            +RQ+E DAG LPDFL ETK++R+  +WRVA  PADL DRRVEITGPVDRKMVIN LNSGA  YMADFEDS+APTW N V+GQ NL DA R+ I+Y  PDTGK Y L  +A  A LLVRPRGWHLDEAHV V+   LSG+LFDFGLYFFHN   L  RG+G Y Y+ KLE HLEA+LWNDVFV AQ  LGVP G+IRAT L+ETI A F+M+E+LYELR+HS GLNCGRWDYIFSYIKK+R HA  + P+R  +TM  PFM +YVQLL+RTCH RGA AMGGMAAQIPV+N+P L AQ L++V++DK REV AGHDGTWVAHP LV +A++ FN+ MPQ NQ++ VP+     +A  LL  P  G IT+ GLEEN++V + Y E+WLRG+GCIP++ KMEDAATAEISRAQVWQW+ H  +T DG  +T  LV++I  +  AT  + + +G      K+ L G +   ++T  ++ DFLT   YPHIV
Sbjct:   53 QRQRELDAGALPDFLSETKYVRE-AAWRVAPIPADLADRRVEITGPVDRKMVINALNSGAKCYMADFEDSTAPTWFNQVDGQVNLIDAVRKTITYTQPDTGKQYAL--NATTATLLVRPRGWHLDEAHVLVNNEVLSGSLFDFGLYFFHNAHELAARGSGVYLYLPKLEHHLEAKLWNDVFVAAQAFLGVPRGSIRATVLIETILAVFQMDEILYELREHSSGLNCGRWDYIFSYIKKLRHHAKYIVPDRAAVTMATPFMASYVQLLVRTCHRRGAHAMGGMAAQIPVRNDPALNAQILDAVREDKAREVAAGHDGTWVAHPGLVQIALDAFNKGMPQANQIARVPDAGQGTTAAQLLE-PAQGPITRRGLEENIDVSLVYTEAWLRGSGCIPLHNKMEDAATAEISRAQVWQWIRHGCTTVDGTRVTKALVREILAKCVATRSVNARAGN-----KWALGGAVVGKILTDDDMVDFLTLPCYPHIV 530          
BLAST of mRNA_Ecto-sp8_S_contig11560.1915.1 vs. uniprot
Match: A0A6G0X4U2_9STRA (Malate synthase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4U2_9STRA)

HSP 1 Score: 606 bits (1563), Expect = 3.340e-212
Identity = 304/490 (62.04%), Postives = 368/490 (75.10%), Query Frame = 1
Query:   25 RRQKEFDAGVLPDFLPETKHIRDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQFNLRDAARRDISYVSPDTGKHYGLTKDAKLAVLLVRPRGWHLDEAHVTVDGRPLSGALFDFGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPVGTIRATALLETITAAFEMEEMLYELRDHSGGLNCGRWDYIFSYIKKMRAHADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNPKLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQL-SFVPECS-VSAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHAASTSDGIEITPRLVQDIAERATHKLLSA-SGXXXXXXKFRLAGRLTANMMT-APELDDFLTSVAYPHIVNIS 1482
            +RQ E DAG LP FLPETK+IR+   WRVA  P DL DRRVEITGPVDRKMVINGLNSGA  YMAD EDSS+PTW  ++ GQ NLRDA RR I+Y  P+TGK Y L +  K A LLVRPRGWHLDEAHVTV GR +SG+LFDFGLYFFHNV  L  RG+ PYFY+ KLE HLEARLWNDVF+ AQ  L VPVGTIRAT L+ET+ A FEMEE+L+EL++HS GLNCGRWDYIFS+IKK+RAH   V P+R  +TM +PFM AYV+LLI TCH RGA AMGGMAAQIPVK++P L  + + +V++DKLREV AGHDGTWVAHP LV +AM++FNE MP P+Q+ S V E + V A DLL+ P  G I+  GLEEN++V + Y E+WLRG GCIP++ KMEDAATAEISR+QVWQW+ H  +T+DG+ IT   +  I +    K  +A         +F LA ++ A +MT   + +DFLT   YPH+V+ +
Sbjct:   50 KRQAEIDAGSLPSFLPETKYIRES-EWRVASIPKDLEDRRVEITGPVDRKMVINGLNSGAKCYMADLEDSSSPTWDTVISGQINLRDAVRRSITYEQPETGKKYALNE--KTATLLVRPRGWHLDEAHVTVGGRVMSGSLFDFGLYFFHNVHELRLRGSAPYFYLPKLEGHLEARLWNDVFIAAQSYLAVPVGTIRATVLIETLLAGFEMEEILFELKEHSSGLNCGRWDYIFSFIKKLRAHEAYVLPDRSAVTMTSPFMAAYVKLLIETCHKRGAHAMGGMAAQIPVKDDPALNEKFMTAVREDKLREVVAGHDGTWVAHPGLVQIAMDVFNEKMPTPHQINSNVKESTKVQAADLLQIPTTGVISSTGLEENIDVSLAYTEAWLRGVGCIPLHNKMEDAATAEISRSQVWQWLRHQRATTDGVAITKERILSILDGCVEKRSAAFPSTSSTQHQFELAKQVVARVMTDTDDFEDFLTLPCYPHVVSFA 536          
BLAST of mRNA_Ecto-sp8_S_contig11560.1915.1 vs. uniprot
Match: K3WB69_GLOUD (Malate synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB69_GLOUD)

HSP 1 Score: 605 bits (1560), Expect = 9.520e-212
Identity = 302/489 (61.76%), Postives = 365/489 (74.64%), Query Frame = 1
Query:   25 RRQKEFDAGVLPDFLPETKHIRDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQFNLRDAARRDISYVSPDTGKHYGLTKDAKLAVLLVRPRGWHLDEAHVTVDGRPLSGALFDFGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPVGTIRATALLETITAAFEMEEMLYELRDHSGGLNCGRWDYIFSYIKKMRAHADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNPKLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQLSFVPECS--VSAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHAASTSDGIEITPRLVQDIAER--ATHKLLSASGXXXXXXKFRLAGRLTANMMTAPELDDFLTSVAYPHIVNI 1479
            +RQKE DAG LPDFLP TK+IR+   W+VA  P DL DRRVEITGPVDRKMVIN LNSG+  YMADFEDS+APTW N V+GQFNL DA R+ ISY  P TGK Y  T + K+A LLVRPRGWHLDEAHV V+   +SG+LFDFGLYFFHN   L  RG+G YFY+ KLE HLEA+LWNDVFV +Q  LGVP G+IRAT L+ETI A F+M+E+LYELR+HS GLNCGRWDYIFSYIKK+R H+  + P+R  + M  PFM AYV+LL+RTCH RGA AMGGMAAQIPVKN+P L  + L++V++DK REV AGHDGTWVAHP LV +AM+ FN+ MPQPNQ+S +PE     +A  L+  P  G IT  GLEEN++V + Y E+WLRG+GCIP++ KMEDAATAEISRAQVWQW+ H   T DG  IT  LV DI +   ++H L +  G      K+ L G +   ++T  ++ DFLT   YPHIV++
Sbjct:   53 QRQKELDAGALPDFLPNTKYIREG-EWKVASIPKDLQDRRVEITGPVDRKMVINALNSGSKCYMADFEDSTAPTWFNQVDGQFNLIDAVRKTISYTHPQTGKKY--TLNDKIATLLVRPRGWHLDEAHVLVNNEIMSGSLFDFGLYFFHNAHELAVRGSGAYFYLPKLEHHLEAKLWNDVFVASQAYLGVPRGSIRATVLIETILAVFQMDEILYELREHSSGLNCGRWDYIFSYIKKLRNHSKFIVPDRSAVGMTTPFMAAYVKLLVRTCHRRGAHAMGGMAAQIPVKNDPALNDKILDAVREDKAREVAAGHDGTWVAHPGLVQIAMDAFNKGMPQPNQISLIPEAGKDTTAAQLIE-PAKGPITFAGLEENIDVSLVYTEAWLRGSGCIPLHNKMEDAATAEISRAQVWQWIRHGCKTVDGKTITKALVLDILKNCVSSHSLNAKPGN-----KWALGGDVVGKILTGEDMVDFLTLPCYPHIVSL 532          
BLAST of mRNA_Ecto-sp8_S_contig11560.1915.1 vs. uniprot
Match: A0A367JLJ1_RHIAZ (Malate synthase n=4 Tax=Rhizopus TaxID=4842 RepID=A0A367JLJ1_RHIAZ)

HSP 1 Score: 605 bits (1561), Expect = 1.100e-211
Identity = 294/486 (60.49%), Postives = 359/486 (73.87%), Query Frame = 1
Query:   28 RQKEFDAGVLPDFLPETKHIRDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQFNLRDAARRDISYVSPDTGKHYGLTKDAKLAVLLVRPRGWHLDEAHVTVDGRPLSGALFDFGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPVGTIRATALLETITAAFEMEEMLYELRDHSGGLNCGRWDYIFSYIKKMRAHADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNPKLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQLSFVPE-CSVSAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHAASTSDGIEITPRLVQDIAERATHKLLSASGXXXXXXKFRLAGRLTANMMTAPELDDFLTSVAYPHIVNIS 1482
            RQ+E D GVLPDFLPET +IR+DP+WR A     L DRRVEITGPVDRKM+IN LNSGA T+MADFEDSSAPTW NM+ GQ NLRDA R  IS+ +P+ GK Y L KD KLA L+VRPRGWH+ E HV +DG P S ++FDF LYFFHN   L+KRG GPYFY+ K+ESHLEARLWND+F +AQ ++ +P GTIR T L+ETI AAFEM+E++YELR+HS GLNCGRWDYIFS+IKK+R H + V P+R  +TM  PFM+AYV+LLI+TCH RG  AMGGMAAQIP+K++ K    A+  V+ DKLREV AGHDGTWVAHPALV +A++IFNEHMPQPNQ+    E   VS+ DLL     G IT+ G+ EN++V + Y+ESWLRG GC+P+   MEDAATAEISR+Q+WQW  H A TSDG  IT   +  I +  T K+    G      K+  A R+ A  +T    DDFLT++ Y  IV I+
Sbjct:   61 RQQELDRGVLPDFLPETAYIRNDPNWRAAPPAPGLQDRRVEITGPVDRKMIINALNSGAYTFMADFEDSSAPTWENMISGQVNLRDAVRESISFSNPN-GKKYELRKDGKLATLIVRPRGWHMVEKHVIIDGEPCSASIFDFALYFFHNAKELIKRGKGPYFYLPKMESHLEARLWNDIFNVAQDMINIPRGTIRGTVLIETILAAFEMDEIIYELREHSSGLNCGRWDYIFSFIKKLRQHPEYVLPDRSAVTMTVPFMDAYVRLLIQTCHKRGVHAMGGMAAQIPIKDDAKANEAAMNKVRTDKLREVTAGHDGTWVAHPALVQIALDIFNEHMPQPNQIHVRREDVQVSSLDLLNVNFKGAITEKGIRENIQVGLAYMESWLRGTGCVPIMNLMEDAATAEISRSQLWQWARHKARTSDGKVITGDYLLKILDEETDKIKKNLGPKYASSKYEAAKRIFATNVTGERYDDFLTTMLYDDIVTIA 545          
BLAST of mRNA_Ecto-sp8_S_contig11560.1915.1 vs. uniprot
Match: A0A8K1C2B5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2B5_PYTOL)

HSP 1 Score: 604 bits (1558), Expect = 1.920e-211
Identity = 300/488 (61.48%), Postives = 367/488 (75.20%), Query Frame = 1
Query:   25 RRQKEFDAGVLPDFLPETKHIRDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQFNLRDAARRDISYVSPDTGKHYGLTKDAKLAVLLVRPRGWHLDEAHVTVDGRPLSGALFDFGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPVGTIRATALLETITAAFEMEEMLYELRDHSGGLNCGRWDYIFSYIKKMRAHADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNPKLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQLSFVPECS--VSAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHAASTSDGIEITPRLVQDIAERAT-HKLLSASGXXXXXXKFRLAGRLTANMMTAPELDDFLTSVAYPHIVNI 1479
            +RQKE DAG+LP+FLPETK+IR+   W+VA  PADL DRRVEITGPVDRKMVIN LNSG+  YMADFEDS+APTW N V+GQ+NL DA R+ ISY  P TGK Y L     +A LLVRPRGWHLDEAHV V+ + +SG+LFDFGLYFFHN   L+K G+GPYFY+ KLE HLEA+LWNDVF+ AQ  L +P G+IRAT L+ETI A F+M+E+LYELR+HS GLNCGRWDYIFSYIKK R H + + P+R  + M  PFM AYV+LLIRTCH RGA AMGGMAAQIPVKN+P L  + + +V++DK REV AGHDGTWVAHP LV +A+++FN+HMP  NQ+S VPE    V A DL+  P G  IT  GLEEN++V + Y E+WLRG+GCIP++ KMEDAATAEISRAQVWQWV H + T +G  +T  LV  I +     + ++A G      K+ LAGR+   ++T  ++ DFLT   YPHIV +
Sbjct:   53 QRQKEIDAGLLPNFLPETKYIRES-DWQVAPIPADLADRRVEITGPVDRKMVINALNSGSKCYMADFEDSTAPTWFNQVDGQYNLIDAVRKTISYTQPQTGKKYALNDT--IATLLVRPRGWHLDEAHVLVNNQIMSGSLFDFGLYFFHNAHELLKHGSGPYFYLPKLEHHLEAKLWNDVFIAAQSYLSIPRGSIRATVLIETILAVFQMDEILYELREHSSGLNCGRWDYIFSYIKKFRNHPNFIVPDRSSVGMTTPFMAAYVKLLIRTCHRRGAHAMGGMAAQIPVKNDPALNDKFMSAVREDKTREVVAGHDGTWVAHPGLVQIALDVFNKHMPAANQISKVPEDGKEVVAADLIAVPTG-PITVTGLEENIDVSLVYSEAWLRGSGCIPLHNKMEDAATAEISRAQVWQWVRHGSKTVEGKVVTKSLVLSILDECVKRRSVNAKGGN----KWALAGRIVGKILTDDDMVDFLTLPCYPHIVQV 532          
BLAST of mRNA_Ecto-sp8_S_contig11560.1915.1 vs. uniprot
Match: A0A024UM57_9STRA (Malate synthase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UM57_9STRA)

HSP 1 Score: 602 bits (1552), Expect = 1.510e-210
Identity = 299/491 (60.90%), Postives = 363/491 (73.93%), Query Frame = 1
Query:   28 RQKEFDAGVLPDFLPETKHIRDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQFNLRDAARRDISYVSPDTGKHYGLTKDAKLAVLLVRPRGWHLDEAHVTVDGRPLSGALFDFGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPVGTIRATALLETITAAFEMEEMLYELRDHSGGLNCGRWDYIFSYIKKMRAHADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNPKLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQLSFVPECS--VSAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHAAST----SDGIEITPRLVQDIAERATHKLLSASGXXXXXXKFRLAGRLTANMMTAPELDDFLTSVAYPHIVNIS 1482
            RQ + DAGVLP FLP TK+IR+   WRVA  P DL DRRVEITGPVDRKMVINGLNSGA  YMAD EDSS+PTWV +V GQ NLRDA RR I++  P TGK Y L +    A LLVRPRGWHLDEAHVTV G  +SG+LFDFGLYFFHNV  L  RG+ PYFY+ KLE HLEARLWNDVF+ AQK LGVPVGTIRAT L+ET+ A +EM+E+L+EL++HS GLNCGRWDYIFS+IKK+RAHA  V P+R  + M APFM AYV+LLI TCH RGA AMGGMAAQIPVKNN +L  Q + +V++DKLREV+AGHDGTWVAHP LV +AM++FN +MP P+Q+     C   + A +LL+ P GG IT  GLEEN++V + Y E+WLRG GCIP++ KMEDAATAEISR+QVWQW+ H  S      D   IT   V  I +    + + AS       KF LAG++  + +T+    DF+T   YP++++++
Sbjct:   51 RQADLDAGVLPTFLPHTKYIREG-DWRVASIPMDLEDRRVEITGPVDRKMVINGLNSGAKCYMADLEDSSSPTWVTLVSGQVNLRDAVRRTITFEQPGTGKKYALNETT--ATLLVRPRGWHLDEAHVTVRGEIMSGSLFDFGLYFFHNVHELRLRGSAPYFYLPKLEGHLEARLWNDVFIAAQKYLGVPVGTIRATVLIETLLAGYEMDEILFELKEHSSGLNCGRWDYIFSFIKKLRAHAAYVLPDRSAVGMTAPFMAAYVKLLIETCHRRGAHAMGGMAAQIPVKNNAELNDQVMAAVREDKLREVRAGHDGTWVAHPGLVGIAMDVFNSNMPSPHQIGKPTNCETKIQAAELLQVPRGGRITVKGLEENIDVALVYTEAWLRGVGCIPLHNKMEDAATAEISRSQVWQWIRHDQSAVKDNGDATRITKTWVAQILDACVAQHVGASSALH---KFDLAGQIVLHTLTSDTFVDFITLPCYPYVISLA 535          
BLAST of mRNA_Ecto-sp8_S_contig11560.1915.1 vs. uniprot
Match: W4G8L4_9STRA (Malate synthase n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G8L4_9STRA)

HSP 1 Score: 602 bits (1553), Expect = 1.860e-210
Identity = 301/490 (61.43%), Postives = 364/490 (74.29%), Query Frame = 1
Query:   28 RQKEFDAGVLPDFLPETKHIRDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQFNLRDAARRDISYVSPDTGKHYGLTKDAKLAVLLVRPRGWHLDEAHVTVDGRPLSGALFDFGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPVGTIRATALLETITAAFEMEEMLYELRDHSGGLNCGRWDYIFSYIKKMRAHADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNPKLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQLSFVPE-CSVSAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHAASTS----DGIEITPRLVQDIAERATHKLLSASGXXXXXXKFRLAGRLTANMMTAPELDDFLTSVAYPHIVNIS 1482
            RQ + DAGVLP FLP+TK+IRD  +W VA  P DL DRRVEITGPVDRKMVINGLNSGA  YMAD EDSSAPTW  +V GQ NLRDA RR I+Y  P TGK Y L  +A  A LLVRPRGWHLDEAH+TV G  +SG+LFDFGL+FFHNV  L  RG+ PYFY+ KLE HLEARLWNDVFV AQ+ L VPVGTIRAT L+ET+ A +EM+E+L+EL++HS GLNCGRWDYIFS+IKK+RAHA  V P+R  + M APFM +YV+LLI TCH RGA AMGGMAAQIPVKN+P L  + + +V++DKLREV+AGHDGTWVAHP LV+VAM++F+ HMP P+Q++   E  SV  +DLL  P GG IT  GLEENV+V + Y E+WLRG GCIP++ KMEDAATAEISR+QVWQW+HH  S      +   IT   V +I + A  + ++ +       KF LA  +    +T+   +DFLT   YPHI + +
Sbjct:   69 RQTQLDAGVLPTFLPQTKYIRDG-NWHVASIPKDLEDRRVEITGPVDRKMVINGLNSGAKCYMADLEDSSAPTWATVVSGQINLRDAVRRTITYEQPGTGKQYAL--NASTATLLVRPRGWHLDEAHMTVRGAVVSGSLFDFGLFFFHNVHELRLRGSAPYFYLPKLEGHLEARLWNDVFVAAQQYLAVPVGTIRATVLIETLLAGYEMDEILFELKEHSSGLNCGRWDYIFSFIKKLRAHASYVLPDRSAVGMTAPFMASYVKLLIETCHRRGAHAMGGMAAQIPVKNDPALNDRVMAAVREDKLREVRAGHDGTWVAHPGLVSVAMDVFDAHMPTPHQIAKKGEDVSVQGEDLLEVPTGGRITVQGLEENVDVALVYTEAWLRGIGCIPLHNKMEDAATAEISRSQVWQWLHHGQSAEYEHGEKNVITKPWVLEILDAAVARHVTTTSPH----KFELAAEIVGKSLTSDSFEDFLTLPCYPHITSFA 551          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11560.1915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTY7_ECTSI0.000e+096.56Malate synthase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A1V9ZCF1_9STRA7.200e-21763.04Malate synthase (Fragment) n=1 Tax=Thraustotheca c... [more]
A0A1V9ZVL8_9STRA9.810e-21362.55Malate synthase n=1 Tax=Thraustotheca clavata TaxI... [more]
A0A5D6XJD5_9STRA2.350e-21262.01Malate synthase n=1 Tax=Pythium brassicum TaxID=14... [more]
A0A6G0X4U2_9STRA3.340e-21262.04Malate synthase n=1 Tax=Aphanomyces euteiches TaxI... [more]
K3WB69_GLOUD9.520e-21261.76Malate synthase n=1 Tax=Globisporangium ultimum (s... [more]
A0A367JLJ1_RHIAZ1.100e-21160.49Malate synthase n=4 Tax=Rhizopus TaxID=4842 RepID=... [more]
A0A8K1C2B5_PYTOL1.920e-21161.48Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024UM57_9STRA1.510e-21060.90Malate synthase n=2 Tax=Aphanomyces invadans TaxID... [more]
W4G8L4_9STRA1.860e-21061.43Malate synthase n=11 Tax=Aphanomyces astaci TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11560contigEcto-sp8_S_contig11560:1227..6433 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score971.8
Seed ortholog evalue1.2e-280
Seed eggNOG ortholog2880.D8LTY7
Preferred nameMLS1
Model size1497
KEGG rclassRC00004,RC00308,RC00311,RC00313,RC02747
KEGG koko:K01637,ko:K01638
KEGG ReactionR00472,R00479
KEGG Pathwayko00620,ko00630,ko01100,ko01110,ko01120,ko01200,map00620,map00630,map01100,map01110,map01120,map01200
KEGG ModuleM00012
Hectar predicted targeting categoryother localisation
GOsGO:0000255,GO:0000256,GO:0003674,GO:0003824,GO:0004451,GO:0004474,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0005975,GO:0006081,GO:0006082,GO:0006083,GO:0006097,GO:0006629,GO:0006631,GO:0006807,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009062,GO:0009514,GO:0009987,GO:0010259,GO:0015976,GO:0016042,GO:0016054,GO:0016740,GO:0016746,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017001,GO:0017144,GO:0019752,GO:0031907,GO:0031974,GO:0032501,GO:0032502,GO:0032787,GO:0034641,GO:0042579,GO:0042737,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043605,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044262,GO:0044270,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045733,GO:0046395,GO:0046483,GO:0046487,GO:0046700,GO:0046912,GO:0048856,GO:0070013,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575
Exons10
EggNOG free text desc.malate synthase activity
EggNOG OGsCOG2225@1,KOG1261@2759
Ec32 ortholog descriptionMalate synthase
Ec32 orthologEc-12_003860.1
EC2.3.3.9,4.1.3.1
Cds size1497
COG Functional cat.C
BiGG ReactioniMM904.YIR031C,iND750.YIR031C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11560.1915.1prot_Ecto-sp8_S_contig11560.1915.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig11560 1227..6433 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143225.7008965-CDS-Ecto-sp8_S_contig11560:1226..14751681143225.7008965-CDS-Ecto-sp8_S_contig11560:1226..1475Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11560 1227..1475 -
1681143225.7147684-CDS-Ecto-sp8_S_contig11560:1757..18871681143225.7147684-CDS-Ecto-sp8_S_contig11560:1757..1887Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11560 1758..1887 -
1681143225.7231195-CDS-Ecto-sp8_S_contig11560:2430..26061681143225.7231195-CDS-Ecto-sp8_S_contig11560:2430..2606Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11560 2431..2606 -
1681143225.7313278-CDS-Ecto-sp8_S_contig11560:3126..33581681143225.7313278-CDS-Ecto-sp8_S_contig11560:3126..3358Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11560 3127..3358 -
1681143225.7398748-CDS-Ecto-sp8_S_contig11560:3536..36351681143225.7398748-CDS-Ecto-sp8_S_contig11560:3536..3635Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11560 3537..3635 -
1681143225.748242-CDS-Ecto-sp8_S_contig11560:3999..41851681143225.748242-CDS-Ecto-sp8_S_contig11560:3999..4185Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11560 4000..4185 -
1681143225.756799-CDS-Ecto-sp8_S_contig11560:4532..46991681143225.756799-CDS-Ecto-sp8_S_contig11560:4532..4699Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11560 4533..4699 -
1681143225.7650552-CDS-Ecto-sp8_S_contig11560:5138..52191681143225.7650552-CDS-Ecto-sp8_S_contig11560:5138..5219Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11560 5139..5219 -
1681143225.7736022-CDS-Ecto-sp8_S_contig11560:5657..57261681143225.7736022-CDS-Ecto-sp8_S_contig11560:5657..5726Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11560 5658..5726 -
1681143225.7824576-CDS-Ecto-sp8_S_contig11560:6325..64331681143225.7824576-CDS-Ecto-sp8_S_contig11560:6325..6433Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11560 6326..6433 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig11560.1915.1

>prot_Ecto-sp8_S_contig11560.1915.1 ID=prot_Ecto-sp8_S_contig11560.1915.1|Name=mRNA_Ecto-sp8_S_contig11560.1915.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=499bp
MCDFRSDPRRQKEFDAGVLPDFLPETKHIRDDPSWRVAEAPADLMDRRVE
ITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQFNLRDAARRD
ISYVSPDTGKHYGLTKDAKLAVLLVRPRGWHLDEAHVTVDGRPLSGALFD
FGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPV
GTIRATALLETITAAFEMEEMLYELRDHSGGLNCGRWDYIFSYIKKMRAH
ADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNP
KLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQL
SFVPECSVSAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPV
NFKMEDAATAEISRAQVWQWVHHAASTSDGIEITPRLVQDIAERATHKLL
SASGGGGGGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIVNISHGRL*
back to top

mRNA from alignment at Ecto-sp8_S_contig11560:1227..6433-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig11560.1915.1 ID=mRNA_Ecto-sp8_S_contig11560.1915.1|Name=mRNA_Ecto-sp8_S_contig11560.1915.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5207bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11560:1227..6433- (Ectocarpus species8 EcLAC_412)
ATGTGTGACTTTCGCTCGGACCCTCGCAGGCAGAAGGAGTTCGACGCCGG CGTTTTGCCGGACTTCTTGCCCGAGACCAAGCACATCCGAGATGACCCTT CCTGGCGGGTGAGAAGAACAAGCACGTATACGATCGATCAGCATTCTTTT TGACGAGTGTCCTTCCATTTGAAACGCCGCAGGCCGTTGTTGCGGTCATT TTTCCAGTGTGTAGAGAGGGAGGGAACGAGGGCTGCTTCGAAGCAATGCG TCTTTCGTACTCTGTTGAGTCTCTCTTGGATGATGCCCTGACAAACAAGC GGGGCTCTACTACTTCAGTACGAAGTAGTATCATGCTTTTTTGCCAGAAC ACGGAGGCTCTACGCGATGAAAGATCTGGCTCGGAGTAGGAGAGCACGGG GTGTAAAGTGCACATGTATCAGGACCGCATCCGGACCCCTGTATCTCCAA GCAGTAGCTCTACTATAGCCCACACGTTGCACACACGTTGCCATGCATGA ATACCCAAGCTCAAACATCTGGAAACGCGCTAAAAGCATTTCTTCGTCAG GGGGTTCCTCCGTCCACTTTACTCCCCATTAAACTTTCATGCCATGGACT TGTTTCTCGGGACACCGTGTAGAGAAAAAATCCCGCGCGCGGGCGATTTG GACCTCTCTTGGTTTCTTTCGGCCCCGCGCTTGACACATGAACGCACGAT GACCCAGGTGGCGGAGGCGCCGGCCGACCTGATGGACAGGCGCGTCGAGA TCACCGGCCCCGTGGACCGCAAGATGGTGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGATTCGACTCAACTCCTGCCTCTTTGTG TACGCTGCGGTGCCGCTCTTTCGGTGAGGTCCTCGAGTCGCCTTAAGTGT ATCCTCCGCTAGGTTCTGTGAATGGTTCTTCCTGTGTACGGCAATGACGG TTCATGTGGTGCGTAGTTGCTACATTGTTACCGGTTTCCGCGGATTTGGT CTCGAGTTTCCTGCTATAGAAGGCCATTTGAAGGACACGATCCTACTTTT CGAAGGACAGTCATCTACAGGTGTGAGTTTGTGTTCTCGTTTGTTTCAAT GTTCCCACATGAGCGAAAGCATTGGCGTTCAGAGTCGGTCCAGCTTCAAG TGTGCACGCGTGTGCGTACGCCCATCCATCGCACATAACCGGCATATGGG CGCGCGTGCGGCAGGTGATTAACGGCCTCAACAGCGGCGCCAGCACGTAC ATGGCGGATTTCGAAGACTCGAGCGCGCCCACGTGGGTCAACATGGTGGG TTGTGTTCGTCAGAGGGGCATGTTGGCCCCTCCCGTGGAGAAGCTTGCCG AAACAAGTCATGATCCGCAGGCTACCGTACCAAAAACAGTTGAACCATAC ATGCGTGCACCAGTTCTTCCAAAGGGGAAGGGGTGCTTCGCGGATCAGCC AGCTAGTCGTTTTTGAGGCGAAGCAATACCGTAAGGTTGAACTTGGTCGA AACGGCACGCGGGCCCGCCAATAACCGCCAAGGTAATTCATACCTTTGCC CCTACATGTAGAAGGAAGTTGGATTTGATCTTCGCCAAGGGTGCCGAAGT GCAGTCCCTCTACCGCACACACTCCGAGTCACAGAGAACACGTTCCCCCA GAAACCCGCTATCCACGAGACCCCACTCTCGACTCCACGTTCAACAACGC TGGGACGGCTGGGCCGTGGCGGGGGTAAACGCAGGTGGAGGGTCAGTTCA ACCTGCGCGACGCGGCTCGTCGGGACATCTCGTACGTCAGTCCCGACACC GGCAAGCACTACGGGCTGACGAAAGACGCCAAGCTGGCGGTGCTCCTGGT GCGGCCGCGCGGCTGGCACCTTGATGAGGCCCACGTTACCGTAGACGGCA GGTGAGCTTCTGTTCTTGCTTTGATTTGATTGGTGCTACTTTTGTTGAGG GGTAGGGGTAGAAAATCGAACACGACAGGCGCCGCCCCATGCCCTGGGAT CCCCGCCCCCCTTCCCCCTCCCCGTCTCGGGTAGACGGTCCCGTTGTAGA GATGGTTTCTCTTGCGAAACGAAACCGTAAGCCGCACGAGCGACGCGCAA AAGCGCCTGACGACGACGAAGAATACTGGCAACCGTGCAACGGCTCCTCA TCAACCGGGTGTGAAGGGGGAGCAATCAAGGTAACACCGCCGACGCCACC ACCTATGTAATGCATGCCACCACCGACAAACATCGAAAACAATTCCAGGC CGCTCTCAGGCGCCCTGTTCGACTTCGGCCTGTACTTCTTCCACAACGTA TTCGCGCTCATGAAGCGAGGCACGGGGCCGTACTTCTACGTGGCCAAGCT GGAGTCCCACCTCGAGGCCCGTCTGTGGAACGACGTCTTCGTCCTCGCTC AGAAGCTGCTCGGGGTGCCCGTGGGAACCATCAGGTACACAAACTCATTA ATTAGAGCGTTTGCACGACACTAGGTTTCATTTCGTCGCAGGCCGAAGCT TCGCCCGCCCTCAGACGTGATTCTCTTTTTCGTTGTGTCCACTTGTTTCG ACGCCGCAGTAGTGAGAGCGGGCTCGAGCGCACCCAGACCCCCTCTGGCC GCCTCCGTCACCTTAGCCTTCCCTTCCCTCCGTTCCTAGACCCTTCGTAA AACTCGACTTTTTTTCTATGATGTCGCTTCATGCAGCACCCGAAACCCCT CTTGCCACCTCCTCCGCCTTAGTCTTCCCTCCCCTCCGATCTATAGCTAT TATAGTTCGTAATACTCGACTCTTTTGTGCCGATGCCGCCTCCTGCAGGG CGACCGCGCTCCTCGAGACGATCACCGCGGCCTTCGAGATGGAGGAAATG CTGTACGAGCTCAGGGACCACTCGGGCGGCCTCAACTGCGGCCGCTGGTA AGCTCGAGAACACACGACACACACAAAGTTTGAACGTCGTCTGTCTGTGT TTCCTCGAGCTCAAATGAGTACTGTTGTGTCAGCGGAAAAACGAAAAAGA CTCTTGTGATGACGTCCCTCCCCCCTTCCCCCCGGCCGCGCGTACCATCG CCGCCGCCGTCGCCCTCCACAACAGGGACTACATCTTCTCCTACATCAAG AAGATGCGGGCTCACGCGGACAAGGTCACCCCCGAGCGCAAGTTCCTCAC CATGGAAGCCCCGTTCATGGAGGCCTACGTGCAGCTGCTGATCCGCACGT GTCACAGCCGCGGGGCGTTCGCGATGGGAGGCATGGCGGCCCAGATCCCG GTGAAGAACAACCCCAAGCTGGCGGCGCAGGCCCTCGAGAGCGTCAAGAA GGACAAGGTGAATGAGTGACCGGCTGGCTGGTGTAGACGGGCTACTAACG GCTGGAAAGACGCGGGGTGGTCACCGAAAAGCTAACCGCACGCGATCCGC GTCGTAGTTGCTTGGGGTCCAGGGATCGGCGTATGGTTTTGAGGACAAAG CCCCGAGATAGTCAAAGCTGTCGAGAGGAAGCCTGCTTCGGGAGTAGATC ACGAAAAATATTGCCGGAAGGCGTGGGCTGACTTGAGCGGGTCGATGCGG CAGCCACGTGTCCGAGCGGATGCGGGATGTTTATTGACTGGTGGGTCTCA GCAAAACGCCAAACATTCCCAACATTCCTGTCCGGGGGATTCGAGAAGAA AGGCAATGGTGAGGGCGGCGCCTGAACCAAGAGAGGGCTAGCAAAACAGG AAGGAAAGAGAAGAAGCGTCACCAAGCTGTGTTCTCATGTATGCTGCGGC AGAAAAGTCATCGGCATCATCGCATGTTACGAAAAAAAACACGCCCCCCT CCCCCTCTGAACACCTCTCCTCTCCAGCTGCGCGAGGTTAAGGCGGGGCA CGACGGGACGTGGGTGGCCCACCCGGCCCTGGTGACGGTGGCGATGGAGA TTTTCAACGAACACATGCCTCAGCCCAACCAGCTGTCGTTCGTCCCGGAG TGCTCCGTGTCAGCGCAGGACCTGCTGCGGACCCCGGACGGGGGAGAGAT CACGTGAGTGGAGCGAGCAAGACAGCCACGACAATACGGCATTTAGGATG GAAATCGAGCAGAAGGGTGCCGTGGTATTGCACGCGTAGCCGTATGCAGC AGCAGCAGCAGCAGCAAAACAACAGCAGCAATACTAGGATGAGACGAGGC AGAGGCCGTTTTTTTGGTTCAAAGATGTCTCTACTCGTCGAGCGCGTGTG TACTGGTGCTGGGATGGGGCGGGCCAGGAAAATGTTGTATGCTGGGAAAG AGGGGTAGGGCATGATGGGGCGGTGCCGCAGGGCACGTATCGTCCGATTG TACGTGTATCAAGCGCCTCGGCGGGTTTCTCCGGTACTATCCGTGCGTTC GATTTTACTGCGGGGAATTGGCATTTTGGAACGAATGTGCGAAATGTCGC CGTCGTCATGACCATCTTGGTGCCGAACTCGTGGCATTCACGCAGGAATG CCGAAGCCACATAAAAATACACCGCAAGATGTGTAGTGTCTTGTCTGCGA TCGATCGTCGTCGTTCACGTCCCGTTCGACTGCTATGGGATCGCAGGCAA CACGGGTTGGAGGAGAATGTGGAGGTGTGCATCTTCTACGTCGAGAGCTG GCTGCGCGGCAACGGCTGCATCCCGGTCAACTTCAAGATGGAAGATGCAG CAACCGCCGAGATCTCTAGGGCGCAGGTATCTACATAGGAGGCGGGCGTC CCACCCCCCACCCCCCTGTCCCCATTCTGACCCACTCCTCCCGTTGGTCG ACACGCTAGCGACCTAGCCTCACGCACCCAATCATATTGATAGCTGTTGG TTGCTTTGGTGCATACATACCCCGGATGTTTATATTGTATGCAACAAAAG AATACAATTTGAACGGTGGCCTTACCACTCGCTGATACTGATTGCCGGCG TGCGCACACTCGTTTTTTTTGCCTCCGCATGCGCGTGTACCGTCATTCCG AACTAAAGGTCTGGCAATGGGTCCACCACGCCGCCTCCACGTCCGACGGC ATCGAGATTACCCCTCGCCTCGTGCAAGATATCGCGGAGAGGGCCACCCA CAAACTCCTATCCGCCTCTGGCGGCGGCGGCGGCGGCGGCAAGTTTCGCC TGGCTGGGCGGCTGACAGCGAACATGATGACCGCGCCCGAGCTGGACGAC TTCCTTACGTCCGTGGCCTACCCCCATATCGTCAACATCTCGCACGGCCG CCTGTAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11560:1227..6433-

>mRNA_Ecto-sp8_S_contig11560.1915.1 ID=mRNA_Ecto-sp8_S_contig11560.1915.1|Name=mRNA_Ecto-sp8_S_contig11560.1915.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1497bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11560:1227..6433- (Ectocarpus species8 EcLAC_412)
ATGTGTGACTTTCGCTCGGACCCTCGCAGGCAGAAGGAGTTCGACGCCGG
CGTTTTGCCGGACTTCTTGCCCGAGACCAAGCACATCCGAGATGACCCTT
CCTGGCGGGTGGCGGAGGCGCCGGCCGACCTGATGGACAGGCGCGTCGAG
ATCACCGGCCCCGTGGACCGCAAGATGGTGATTAACGGCCTCAACAGCGG
CGCCAGCACGTACATGGCGGATTTCGAAGACTCGAGCGCGCCCACGTGGG
TCAACATGGTGGAGGGTCAGTTCAACCTGCGCGACGCGGCTCGTCGGGAC
ATCTCGTACGTCAGTCCCGACACCGGCAAGCACTACGGGCTGACGAAAGA
CGCCAAGCTGGCGGTGCTCCTGGTGCGGCCGCGCGGCTGGCACCTTGATG
AGGCCCACGTTACCGTAGACGGCAGGCCGCTCTCAGGCGCCCTGTTCGAC
TTCGGCCTGTACTTCTTCCACAACGTATTCGCGCTCATGAAGCGAGGCAC
GGGGCCGTACTTCTACGTGGCCAAGCTGGAGTCCCACCTCGAGGCCCGTC
TGTGGAACGACGTCTTCGTCCTCGCTCAGAAGCTGCTCGGGGTGCCCGTG
GGAACCATCAGGGCGACCGCGCTCCTCGAGACGATCACCGCGGCCTTCGA
GATGGAGGAAATGCTGTACGAGCTCAGGGACCACTCGGGCGGCCTCAACT
GCGGCCGCTGGGACTACATCTTCTCCTACATCAAGAAGATGCGGGCTCAC
GCGGACAAGGTCACCCCCGAGCGCAAGTTCCTCACCATGGAAGCCCCGTT
CATGGAGGCCTACGTGCAGCTGCTGATCCGCACGTGTCACAGCCGCGGGG
CGTTCGCGATGGGAGGCATGGCGGCCCAGATCCCGGTGAAGAACAACCCC
AAGCTGGCGGCGCAGGCCCTCGAGAGCGTCAAGAAGGACAAGCTGCGCGA
GGTTAAGGCGGGGCACGACGGGACGTGGGTGGCCCACCCGGCCCTGGTGA
CGGTGGCGATGGAGATTTTCAACGAACACATGCCTCAGCCCAACCAGCTG
TCGTTCGTCCCGGAGTGCTCCGTGTCAGCGCAGGACCTGCTGCGGACCCC
GGACGGGGGAGAGATCACGCAACACGGGTTGGAGGAGAATGTGGAGGTGT
GCATCTTCTACGTCGAGAGCTGGCTGCGCGGCAACGGCTGCATCCCGGTC
AACTTCAAGATGGAAGATGCAGCAACCGCCGAGATCTCTAGGGCGCAGGT
CTGGCAATGGGTCCACCACGCCGCCTCCACGTCCGACGGCATCGAGATTA
CCCCTCGCCTCGTGCAAGATATCGCGGAGAGGGCCACCCACAAACTCCTA
TCCGCCTCTGGCGGCGGCGGCGGCGGCGGCAAGTTTCGCCTGGCTGGGCG
GCTGACAGCGAACATGATGACCGCGCCCGAGCTGGACGACTTCCTTACGT
CCGTGGCCTACCCCCATATCGTCAACATCTCGCACGGCCGCCTGTAG
back to top