mRNA_Ecto-sp8_S_contig11547.1904.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig11547.1904.1
Unique NamemRNA_Ecto-sp8_S_contig11547.1904.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig11547.1904.1 vs. uniprot
Match: D8LH25_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH25_ECTSI)

HSP 1 Score: 1116 bits (2886), Expect = 0.000e+0
Identity = 600/659 (91.05%), Postives = 610/659 (92.56%), Query Frame = 1
Query:    1 MSAAFGAPAPLPGQPGFRARPSESMARETAEMEERLSRLKTDLAVEAEMREAAGPRAGSARWRSARIDRGSVRAYAKDVKIRHKQQLQKRPPHGIFASATTGGGAGLGGSKAEQRVRPSSAFASKEVARWGVGDTLGWLDSLGLEKYKSVFQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLRRGGGKKRALDANMPPPPAPALELLPNLTTSSTRVNRDEKGPRGERMGEGGAAAETTSQIAQEDCRGVDSRYSPLSGGKKQHWSAIKPLSENQRDGGGLSPPAVNLADGQYDESAASSSFKDAVAEWRGEGKYSTTTPATEGRASSLHRPAVVGRAPLAGMPSTAEEETYEDMQLVFNAKPARPGLLGGREGGRAGMGEETECWVNPFSSPRAGEKGENSQLVELGHEPGASSHGTETLAVAGPKQQQEVREKGHDPALALDEEAEHEAFRKAVAEWNRGKNTGVTADGSGVGDGSASGRGNGDISSAQTATEVEIPSRRTAEAMAEELRKQMDAEHTSQAKELEEEKRALLEGLERSREGETKGDQLELGAPDEGTEVEEQDDDASWREGEDVRSVGSSSVCSSTGRSSNSERQDTEADNIGCGGHDSSSSGGVEIEVMESVLGADLSIEGGVSYVVDECDSGDEPHF 1977
            M+ AFGAPAPLPGQPGFRARPSESMARETAEMEERLSRLKTDLAVEAEMREAAGPRAG ARWRSARIDRGSVRAYAKDVKIRHKQQLQKRPPHGIFA+ +           AEQRVRPS AFASKEV RWGVGDTLGWLDSLGLEKY+SVFQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLRRGG KKRALDANMPPPPAPALELLPN TTSSTRVNRDEKGPRGE +GEGGAAAETTSQIA EDC GV  RYSPLSGG KQHWS IKPLSENQRDGGGLSP A NLADGQYDESAASSSFKDAVAEWRGEGKYSTTT ATEGRASSLHRPAVVGRAPLAGMPS AEEE YEDMQLVFNAKPARPGLLGGREGGRAGMGEETECWVNPFSSPR G KG+NSQLV+LGHEPG SSHGTETL VAG KQQQ VREKGHDPALALDEEAEHEAFRKAVAEWNRGKNTGVTADGSGV DGSASGRG G ISSAQTATEVEIPSRRTAEAMAEELRKQMDAEH SQAKELEEEKRALLEGLERSREGETKGDQLELGAPD GTEVEEQDDDASWRE ED RSVG SSVCSSTGRSS S+RQD EA+NIGCGGHDSS   GVEIEV+ESVLGADLSIEGGVSYVVDECDSGDEPHF
Sbjct:    1 MATAFGAPAPLPGQPGFRARPSESMARETAEMEERLSRLKTDLAVEAEMREAAGPRAGGARWRSARIDRGSVRAYAKDVKIRHKQQLQKRPPHGIFANKS-----------AEQRVRPSPAFASKEVTRWGVGDTLGWLDSLGLEKYRSVFQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLRRGGRKKRALDANMPPPPAPALELLPNQTTSSTRVNRDEKGPRGEGIGEGGAAAETTSQIAPEDCGGVGRRYSPLSGGNKQHWSTIKPLSENQRDGGGLSPTADNLADGQYDESAASSSFKDAVAEWRGEGKYSTTTSATEGRASSLHRPAVVGRAPLAGMPSAAEEEKYEDMQLVFNAKPARPGLLGGREGGRAGMGEETECWVNPFSSPRIGVKGDNSQLVDLGHEPGVSSHGTETLTVAGSKQQQGVREKGHDPALALDEEAEHEAFRKAVAEWNRGKNTGVTADGSGVRDGSASGRGIGGISSAQTATEVEIPSRRTAEAMAEELRKQMDAEHCSQAKELEEEKRALLEGLERSREGETKGDQLELGAPDGGTEVEEQDDDASWREREDARSVGPSSVCSSTGRSSGSDRQDAEAENIGCGGHDSS---GVEIEVVESVLGADLSIEGGVSYVVDECDSGDEPHF 645          
BLAST of mRNA_Ecto-sp8_S_contig11547.1904.1 vs. uniprot
Match: A0A6H5JM42_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM42_9PHAE)

HSP 1 Score: 1077 bits (2784), Expect = 0.000e+0
Identity = 596/713 (83.59%), Postives = 609/713 (85.41%), Query Frame = 1
Query:    1 MSAAFGAPAPLPGQPGFRARPSESMARETAEMEERLSRLKTDLAVEAEMREAAGPRAGSARWRSARIDRGSVRAYAKDVKIRHKQQLQKRPPHGIFASATTGGGAGLGGSK-----------------------------------------------------AEQRVRPSSAFASKEVARWGVGDTLGWLDSLGLEKYKSVFQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLRRGGGKKRALDANMPPPPAPALELLPNLTTSSTRVNRDEKGPRGERMGEGGAAAETTSQIAQEDCRGVDSRYSPLSGGKKQHWSAIKPLSENQRDGGGLSPPAVNLADGQYDESAASSSFKDAVAEWRGEGKYSTTTPATEGRA-SSLHRPAVVGRAPLAGMPSTAEEETYEDMQLVFNAKPARPGLLGGREGGRAGMGEETECWVNPFSSPRAGEKGENSQLVELGHEPGASSHGTETLAVAGPKQQQEVREKGHDPALALDEEAEHEAFRKAVAEWNRGKNTGVTADGSGVGDGSASGRGNGDISSAQTATEVEIPSRRTAEAMAEELRKQMDAEHTSQAKELEEEKRALLEGLERSREGETKGDQLELGAPDEGTEVEEQDDDASWREGEDVRSVGSSSVCSSTGRSSNSERQDTEADNIGCGGHDSSSSGGVEIEVMESVLGADLSIEGGVSYVVDECDSGDEPHF 1977
            M+AAFGAPAPLPGQPGFRARPSESMARETAEMEERLSRLKTDLAVEAEMREAAG RAG ARWRSARI+RGSVRAYAKDVKIRHKQQLQKRPPHGIFASATT GGAGL GSK                                                     AEQ VRPS AFASKEVARWGVGDTLGWLDSLGLEKY+S+FQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLRRGGGKK+ALDANMPPPPAPALELLP+ TTSSTRV RDE+GPRGE   EG AAAETTSQIAQEDCRGV  RYSPLSGG KQHWSAIKPLSENQRDG GLSPPAVN ADGQY+E AA SS KDAVAEWRGEGKYSTTT ATEGRA SSL RP VVGRAPLAGMPSTAEEE +EDMQLVFNAKPARPGLLGGREGGR  MGEETECWVNPFSSPR GEKGENSQLV+LGHEP ASSH TETL VA  KQ QE+R  GHDPALALDEEAEHEAFRKAVAEWNRGKNTGVTADGSG+GDGSASGRG G ISSAQTATEVEIPSRRTAEAMAEELRKQMDAEHTSQAKELEEEKRALLEGLE SREG TKGDQLELGAP EGTEVEEQDDDA WREGEDVRSVGSSSVCSS GRSS SERQDTEADN GCGGHD S  G VEIEV+ESVLGADLS EGGVSYVVDECDSGDE HF
Sbjct:    1 MAAAFGAPAPLPGQPGFRARPSESMARETAEMEERLSRLKTDLAVEAEMREAAGTRAGGARWRSARIERGSVRAYAKDVKIRHKQQLQKRPPHGIFASATTRGGAGLVGSKGQPQAGAGARAAXXXXXXXXXXXXXXWQQQARGDAQISRNPAASRSPPLPQESAEQCVRPSPAFASKEVARWGVGDTLGWLDSLGLEKYRSMFQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLRRGGGKKQALDANMPPPPAPALELLPDQTTSSTRVKRDERGPRGEGKEEGEAAAETTSQIAQEDCRGVGHRYSPLSGGNKQHWSAIKPLSENQRDGDGLSPPAVNPADGQYNEFAAGSSIKDAVAEWRGEGKYSTTTSATEGRAGSSLRRPTVVGRAPLAGMPSTAEEENFEDMQLVFNAKPARPGLLGGREGGRESMGEETECWVNPFSSPRVGEKGENSQLVDLGHEPEASSHCTETLTVADSKQLQEMRHTGHDPALALDEEAEHEAFRKAVAEWNRGKNTGVTADGSGIGDGSASGRGIGGISSAQTATEVEIPSRRTAEAMAEELRKQMDAEHTSQAKELEEEKRALLEGLESSREGATKGDQLELGAPGEGTEVEEQDDDARWREGEDVRSVGSSSVCSSAGRSSGSERQDTEADNFGCGGHDGS--GVVEIEVVESVLGADLSSEGGVSYVVDECDSGDESHF 711          
BLAST of mRNA_Ecto-sp8_S_contig11547.1904.1 vs. uniprot
Match: A0A835YK85_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK85_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.110e-32
Identity = 115/338 (34.02%), Postives = 165/338 (48.82%), Query Frame = 1
Query:   10 AFGAPAPLPGQPGFRARPSESMARETAEMEERLSRLKTDLAVEAEMREAAGPRAGSAR----WRSARIDRGSVRAYAKDVKIRHKQQL-------------QKRPPHGIFA--------------SATT----GGGAG----LGGSKAEQRVRPSSA-FASKEVARWGVGDTLGWLDSLGLEKYKSVFQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLRRGGGKKRALDANMPPPPAPALELLPNLTTSSTRVNRDEKGPRGERMGEGGAAAETTSQIAQEDC--RGVDS-------RYSPL----SGGKKQHWSAIKPLSENQRDGGG 864
            AFG  APLPG  G +   SE +A ET  +E RL+RL+ D+AVE E R + G    S++    W++A   RGS+R Y K+VK R ++++             ++RP   I                SAT+    GGG G     GGS A    + +   F  ++   W V D L WLD +GL ++++VF+ NEISG ILLEVG DDLDYM +  LAHRK +L+GI+DLRR G               P   + P ++ +             +      A A T+S    E C  RG ++       +  PL    +  + +HWSA++PL++N    GG
Sbjct:    8 AFGPAAPLPGTKGLKKSQSERLAEETLSLEARLARLRVDMAVEQERRASTGSAGSSSKGNGFWKTAGQTRGSMRNYGKEVKTREREKVTEAQASHAALRPRRQRPLEMIAMARASEHSRVSQSADSATSRSADGGGQGGRRDSGGSTASPGGKQNGGGFRDRDAGDWSVDDALEWLDMIGLSQHRAVFRDNEISGPILLEVGPDDLDYMRITALAHRKLLLRGIDDLRRNG--------------QPTAVVAPLISAAXXXXXXXXXXXNAQVP----APASTSSPALDERCCPRGPETADDDDVRKAPPLPPAPAAAQYRHWSAVRPLADNPAANGG 327          
BLAST of mRNA_Ecto-sp8_S_contig11547.1904.1 vs. uniprot
Match: A0A7S2CWQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CWQ5_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.240e-32
Identity = 92/218 (42.20%), Postives = 120/218 (55.05%), Query Frame = 1
Query:  367 ASKEVARWGVGDTLGWLDSLGLEKYKSVFQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLRRGGGKKRALDANMPPPPAPALELLPNLTTSSTRVNRDEKGPRGERMGEGGAAAETTSQIAQEDCRGVDSRYSPLSGGKKQHWSAIKPLSENQRDGGGLSPPAVNLADGQYDESAASSSFKDAVAEWRGEGKYSTTTPATEGRASSLHRP 1020
            A K+V  WGV DT+ W+ SLGL +Y +VF+ NEISG +L+EVGL+DLDYM V+VLAHRK +LKGIEDL+R G               P L L  +   S T+V +               +A T++  A  D  G+    S  + G   HWS + PLSEN  DG G    AVNLADG YDE+A    F++AV  WR  G+   TT A+  +   +  P
Sbjct:   44 AGKQVEAWGVTDTVEWVTSLGLGQYAAVFEANEISGPVLVEVGLEDLDYMQVKVLAHRKVLLKGIEDLKRNG--------------RPTLNLKHH---SPTKVGQQRTVSYS-----ASTSAGTSTSSAGIDTGGMGEANSQPTKGAV-HWSVVTPLSENPVDGTG--DVAVNLADGMYDEAAQQREFQNAVMAWRSGGQ---TTSASSQQGPEIDAP 233          
BLAST of mRNA_Ecto-sp8_S_contig11547.1904.1 vs. uniprot
Match: A0A7S0SVV3_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVV3_9STRA)

HSP 1 Score: 132 bits (331), Expect = 6.930e-29
Identity = 97/327 (29.66%), Postives = 166/327 (50.76%), Query Frame = 1
Query:    4 SAAFGAPAPLPGQPGFRARPSESMARETAEMEERLSRLKTDLAVEAEMREAAGPRAGSARWRSARIDRGSVRAYAKDVKIRHKQQLQKRP--PHGIFASATTGGGAGLGGSKAEQRVRPSSAFASKEVARWGVGDTLGWLDSLGLEKYKSVFQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLRRGGGKKRALDANMPPPPAPALELLPNLTTSSTRVNRDEKGPRGERMGEGGAAAETTSQIAQEDCRGVDSRYSPLSGGKKQHWSAIKPLSENQRDGGGLSPP---AVNLADGQY-DESAASSSFKDAVAEWRGEGK 966
            S++FG P PLPGQ G++   +  + ++  EMEERL  L+  L  +  + +AA P+ G +RW SAR+D+GSV  Y KD++ ++K++++ +      ++ ++T          K +++      + +K+V  W + D   WL +L LE+Y+ +F+ N+I+G +L+E+ +DDLDY++V++L HRK ILK IE L+    + ++            L+ + +    S  + ++ K               +T+ I                   K HWS ++P+S N      +S P   A+N AD    DE A    F+ AV EWR   K
Sbjct:    4 SSSFGEPKPLPGQTGYKLSQTVVLEKDAKEMEERLKMLQERLEKQ-RLEDAAVPKPGGSRWNSARVDKGSVLTYNKDLQEKYKKKVESQGGGDPALWITSTN--------KKEKRKTESHINYMNKDVKDWTMLDVSHWLIALNLEEYEEIFKVNQINGKVLIELTVDDLDYLNVKILNHRKLILKNIEILKNKMSQGKS-----------NLDDIKSNKILSEGIAKESK-------------ELSTTYITSXXXXXXXXNL-------KSHWSQLEPISSNVL----ISKPNDSAINAADSDVLDEEAEKILFQQAVMEWRNSNK 286          
BLAST of mRNA_Ecto-sp8_S_contig11547.1904.1 vs. uniprot
Match: A0A7S2V2V0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2V0_9STRA)

HSP 1 Score: 103 bits (258), Expect = 5.770e-23
Identity = 49/74 (66.22%), Postives = 59/74 (79.73%), Query Frame = 1
Query:  361 AFASKEVARWGVGDTLGWLDSLGLEKYKSVFQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLRRGG 582
            AF +K V+ W VGDT+ WL +L L +YK  FQQNEISG ILLEVGL+DLDYM + VLAHRK +LKGIE+L+R G
Sbjct:    7 AFYNKTVSTWEVGDTVEWLGALKLPQYKEAFQQNEISGAILLEVGLEDLDYMQITVLAHRKTLLKGIEELKRHG 80          
BLAST of mRNA_Ecto-sp8_S_contig11547.1904.1 vs. uniprot
Match: F0YCY0_AURAN (SAM domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCY0_AURAN)

HSP 1 Score: 112 bits (281), Expect = 1.850e-22
Identity = 111/370 (30.00%), Postives = 156/370 (42.16%), Query Frame = 1
Query:   64 SESMARETAEMEERLSRLKTDLAVEAEMREAAGPR--AGSARWRSARIDRGSVRAYAKDVKIRHKQQLQKRPPHGIF-ASATTGGGAGLGGSKAEQRV-RPSSAFASKEVARWGVGDTLGWLDSLG-LEKYKSVFQQN------------------------EISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLR---RGGGKKRALDANMPPPPAPALELLPNLTTSSTRVNRDEKGPRGERMGEGGAAAETTSQIAQEDC-----------RGVDSRYSPLSGGKKQHWSAIKPLSENQRDGGGL-----------------------SPPAVNLADGQ---YDESAASSSFKDAVAEWRGEGK 966
            +E +A E  +M ++L+ L+  ++ E + REAA      G ARW S+  DRG +RAY ++   R K     R P     A +   G      + A  RV   S  + S+ VA W V D   WL++   L +Y +VF  N                        EI G  LL++GLDDLDY++++ LAHRK++LKG+ +L    R G   RAL      PP   L+    L  +S   +     PR  R+G    A       A  D            R V +  +P    +  HWSA  PL+E Q  GG L                       +P  +++  G     DE A   +FK AV EWR  GK
Sbjct:   18 TERLAAEAQQMSDKLNALRAQMSREKQKREAAETTRGVGGARWGSSGGDRGGIRAYGREA--REKAGATNRAPRAARPARSPAAGDRAAAAAAAPPRVFGASKGYWSRPVAEWSVADAADWLETTAKLPQYAAVFAANDRAAKGCEIPNFKGSYLGRFPLANEIGGAELLDLGLDDLDYLEIKALAHRKKLLKGVAELNVANRNGQVLRALSRGDDGPPT-GLDGTSPLKPASVPADGRGPSPRKARVGGALGAPAPKDPFAPGDAYEALPPSPPRSRRVAAEVAPAK--QPLHWSAAAPLAETQVSGGALDVNGGDRAPRGLLDGAGAAGGWSNPADLDVGGGSSLLLDEQAEQEAFKRAVEEWRSGGK 382          
BLAST of mRNA_Ecto-sp8_S_contig11547.1904.1 vs. uniprot
Match: A0A7S1TYX0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYX0_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.310e-22
Identity = 85/228 (37.28%), Postives = 102/228 (44.74%), Query Frame = 1
Query:  352 PSSAFASKEVARWGVGDTLGWLDSLGLEKYKSVFQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLRRGGG---------KKRALDANMPPPPAPALELLPNLTTSSTRVNRDEKGPR----GERMGEGGAAAETTSQIAQEDCRGVDSRYSPLSGGKKQHWSAIK-PLSENQRDGGGLSPPAVNLADGQYDESAASSSFKDAVAEWRGEGKYSTTTPATE 993
            P +  A K  A W V D   WL  L L  Y   F++N ISG ILL+VGLDDLDYM +R LAHRK +LKGIEDLR  G           +R   A    P A A  L     T++   + +E   R    G R+G   A A T +  A                    HWS  K P   N   GGG    A  L  G  DE A  ++F+ AV EWR  GK    T A +
Sbjct:   21 PPAELAQKRAASWSVEDVCAWLSWLNLGAYVPRFRENLISGDILLDVGLDDLDYMRIRALAHRKILLKGIEDLRVNGRVTVASASQIARRPSSARSRVPGADAKALASPAATTTAYYSAEEPSSRPSADGNRVG---AEAVTKAPPA------------------TMHWSQAKQPEPSNASGGGG----AGGLMGGAIDEEAEHAAFRAAVEEWRSGGKVRIVTEAQD 223          
BLAST of mRNA_Ecto-sp8_S_contig11547.1904.1 vs. uniprot
Match: A0A8J2SUN7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUN7_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.670e-20
Identity = 74/191 (38.74%), Postives = 103/191 (53.93%), Query Frame = 1
Query:   73 MARETAEMEERLSRLKTDLAVEAEMREAAGPRAGSARWRSARIDRGSV-RAYAKDVKIRHKQQLQKRPPHGIFASATTGGGAGLGGSKAEQRVRPSSAFASKEVARWGVGDTLGWLDSLGLEKYKSVFQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDL----RRGGGKKRALDANMPPPPAP 630
            + R+T + +E L+ L+  +  E E R+AA PR G+ RW SA + +G++ R+Y KDV    +++L++R   G   +A +               R    F    V RW V D   WL SL L +Y   F  NEISG  LL++GLDDLDYM V+ LAHRKR+LKG+ +L    RRG    +        PPAP
Sbjct:   16 LQRDTQQQQESLNALRAQMRQEKERRDAA-PRGGT-RWGSAAVKKGALGRSYGKDV----RKKLEQRTASGQGRAAAS---------------RRDGRFWDLPVQRWSVADAGDWLVSLDLAQYCETFASNEISGRELLDLGLDDLDYMGVKALAHRKRLLKGVAELCAAHRRGAVAPQDPTFGREKPPAP 185          
BLAST of mRNA_Ecto-sp8_S_contig11547.1904.1 vs. uniprot
Match: A0A2R5GBD3_9STRA (Kinesin light chain 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBD3_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.200e-18
Identity = 63/163 (38.65%), Postives = 93/163 (57.06%), Query Frame = 1
Query:   91 EMEERLSRLKTDLAVEAEMREAAGPRAGSAR-WRSARIDRGSVRAYAKDVKIRHKQQLQKRPPHGIFASATTGGGAGLGGSKAEQRVRPSSAFASKEVARWGVGDTLGWLDSLGLEKYKSVFQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLRR 576
            +ME  L +L+  L  E E  +A   +AG+   W+SA  ++GS+RA+A DV+   + Q  K        +A    G+ +  +K ++R+         E   W   D   WL SLGLEKYK +F +NEI G +LLE+G+DDLDYM++  LAHRK +LK +  L+R
Sbjct:    2 QMEWNLHKLRNSL--ERERAKAPSTKAGAGPIWQSASTNKGSLRAFASDVRGGSRSQSTKGASRAAKGNAK---GSCVASTKPKKRI-----LRGNECPEWTKSDVQQWLHSLGLEKYKKIFAENEIDGAVLLELGVDDLDYMNINALAHRKALLKEVARLKR 154          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11547.1904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LH25_ECTSI0.000e+091.05SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JM42_9PHAE0.000e+083.59SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YK85_9STRA1.110e-3234.02SAM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2CWQ5_9STRA1.240e-3242.20Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S0SVV3_9STRA6.930e-2929.66Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2V2V0_9STRA5.770e-2366.22Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
F0YCY0_AURAN1.850e-2230.00SAM domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S1TYX0_9STRA3.310e-2237.28Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8J2SUN7_9STRA3.670e-2038.74Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A2R5GBD3_9STRA1.200e-1838.65Kinesin light chain 1 n=1 Tax=Hondaea fermentalgia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11547contigEcto-sp8_S_contig11547:2180..4372 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1134.4
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LH25
Model size1980
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.Sterile alpha motif.
EggNOG OGs2A4KX@1,2RY7P@2759
Ec32 ortholog descriptionSterile alpha motif/pointed domain
Ec32 orthologEc-06_010960.1
Cds size1980
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143225.0027785-CDS-Ecto-sp8_S_contig11547:2179..38251681143225.0027785-CDS-Ecto-sp8_S_contig11547:2179..3825Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11547 2180..3825 -
1681143225.0226083-CDS-Ecto-sp8_S_contig11547:4038..43721681143225.0226083-CDS-Ecto-sp8_S_contig11547:4038..4372Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11547 4039..4372 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11547.1904.1prot_Ecto-sp8_S_contig11547.1904.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig11547 2180..4372 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig11547.1904.1

>prot_Ecto-sp8_S_contig11547.1904.1 ID=prot_Ecto-sp8_S_contig11547.1904.1|Name=mRNA_Ecto-sp8_S_contig11547.1904.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=660bp
MSAAFGAPAPLPGQPGFRARPSESMARETAEMEERLSRLKTDLAVEAEMR
EAAGPRAGSARWRSARIDRGSVRAYAKDVKIRHKQQLQKRPPHGIFASAT
TGGGAGLGGSKAEQRVRPSSAFASKEVARWGVGDTLGWLDSLGLEKYKSV
FQQNEISGTILLEVGLDDLDYMDVRVLAHRKRILKGIEDLRRGGGKKRAL
DANMPPPPAPALELLPNLTTSSTRVNRDEKGPRGERMGEGGAAAETTSQI
AQEDCRGVDSRYSPLSGGKKQHWSAIKPLSENQRDGGGLSPPAVNLADGQ
YDESAASSSFKDAVAEWRGEGKYSTTTPATEGRASSLHRPAVVGRAPLAG
MPSTAEEETYEDMQLVFNAKPARPGLLGGREGGRAGMGEETECWVNPFSS
PRAGEKGENSQLVELGHEPGASSHGTETLAVAGPKQQQEVREKGHDPALA
LDEEAEHEAFRKAVAEWNRGKNTGVTADGSGVGDGSASGRGNGDISSAQT
ATEVEIPSRRTAEAMAEELRKQMDAEHTSQAKELEEEKRALLEGLERSRE
GETKGDQLELGAPDEGTEVEEQDDDASWREGEDVRSVGSSSVCSSTGRSS
NSERQDTEADNIGCGGHDSSSSGGVEIEVMESVLGADLSIEGGVSYVVDE
CDSGDEPHF*
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mRNA from alignment at Ecto-sp8_S_contig11547:2180..4372-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig11547.1904.1 ID=mRNA_Ecto-sp8_S_contig11547.1904.1|Name=mRNA_Ecto-sp8_S_contig11547.1904.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2193bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11547:2180..4372- (Ectocarpus species8 EcLAC_412)
ATGTCGGCAGCCTTTGGCGCCCCGGCACCGCTCCCGGGGCAGCCAGGCTT CCGGGCGAGACCTTCCGAGTCCATGGCCCGAGAAACTGCGGAGATGGAGG AGCGTCTCTCTCGGCTCAAGACCGATCTTGCGGTCGAGGCGGAGATGAGG GAGGCCGCGGGGCCGAGAGCGGGAAGCGCTCGATGGCGCAGCGCAAGAAT CGACCGGGGATCCGTGCGCGCGTACGCGAAAGACGTCAAGATCCGCCACA AGCAGCAGCTGCAGAAACGCCCACCGCATGGGATCTTCGCCAGCGCCACC ACCGGGGGGGGGGCGGGCCTCGGGGGGAGCAAGGGTCAGCCGCAAGCAGG GGCTGGGGCTCGCGCGGCGGCCGCACTCCGAGATGAGCAGCAACAGCGAC AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGCAGCAGCAGCACTGGCAGCAGCAAGCTGGAGGCGACGCACAAAACAG TAACAATCCTGCTGCTTCACGATCGCCGCCACTGCCGGAGACGTCAGCTG AGCAGCGTGTTCGTCCGAGCTCGGCCTTCGCGAGCAAGGAAGTCGCCCGA TGGGGTGTAGGGGACACGCTGGGGTGGCTCGACAGTCTCGGGCTCGAAAA GTACAAAAGCGTCTTTCAGCAGAACGAGATTTCGGGGACGATCTTGCTGG AGGTAGGGCTGGACGATCTCGACTACATGGACGTACGCGTCTTGGCGCAC CGCAAGCGCATCCTAAAAGGTATCGAGGATCTCAGGAGGGGCGGCGGAAA GAAGAGGGCATTGGATGCTAACATGCCACCGCCCCCGGCCCCGGCGTTGG AGCTGCTGCCAAACCTAACCACCAGTAGTACACGTGTAAACAGGGATGAG AAGGGCCCACGGGGGGAACGGATGGGAGAAGGAGGGGCAGCAGCAGAAAC GACATCGCAAATTGCTCAAGAAGACTGTCGCGGAGTCGACAGCCGATACT CACCCCTCAGCGGAGGAAAGAAGCAACACTGGTCTGCGATCAAGCCGTTG TCGGAAAACCAAAGGGATGGTGGCGGACTATCACCACCAGCGGTCAATCT TGCCGACGGACAGTACGACGAATCGGCTGCGAGCTCCAGCTTTAAAGATG CCGTAGCAGAGTGGCGTGGAGAAGGAAAATATTCGACAACAACGCCGGCA ACAGAGGGCCGCGCTTCCTCTTTGCATCGACCCGCCGTGGTTGGCCGTGC CCCCTTAGCTGGAATGCCTTCTACAGCTGAAGAAGAAACATATGAAGATA TGCAGCTGGTGTTCAATGCCAAACCGGCTAGACCAGGACTGCTGGGGGGA CGAGAAGGAGGAAGAGCAGGCATGGGGGAAGAGACAGAGTGCTGGGTTAA TCCTTTCTCTTCTCCACGGGCAGGCGAGAAGGGGGAAAACTCCCAGCTCG TAGAACTCGGTCATGAACCGGGAGCTTCTTCCCACGGTACGGAGACGTTG GCGGTGGCAGGTCCCAAGCAACAACAGGAGGTGCGGGAAAAGGGGCACGA CCCGGCCCTTGCTCTTGACGAAGAAGCCGAACACGAGGCGTTCCGAAAGG CTGTGGCGGAGTGGAACCGCGGGAAAAACACCGGCGTCACGGCCGATGGT AGCGGCGTCGGGGATGGCAGTGCCTCTGGTCGTGGGAACGGGGACATCAG TTCTGCTCAAACAGCCACAGAGGTGGAGATTCCTAGCAGGCGAACGGCGG AAGCGATGGCAGAGGAGCTGCGGAAGCAGATGGACGCCGAGCACACTTCG CAGGCGAAGGAGCTGGAAGAAGAGAAGAGAGCGTTGCTCGAGGGCTTGGA ACGTTCACGAGAAGGGGAAACAAAGGGCGACCAACTTGAGCTGGGCGCAC CCGACGAGGGAACGGAGGTGGAAGAGCAGGATGACGACGCAAGTTGGCGT GAAGGGGAGGATGTTAGAAGCGTAGGATCATCTTCCGTCTGCTCGTCAAC GGGGCGAAGCAGCAACTCTGAGCGCCAGGATACGGAGGCAGATAATATTG GATGCGGTGGTCATGACAGCAGCAGCAGTGGTGGTGTCGAGATTGAGGTG ATGGAGTCGGTGCTTGGAGCCGACTTGTCGATTGAGGGTGGGGTGAGCTA CGTCGTTGATGAATGTGATAGCGGCGATGAGCCACACTTTTGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11547:2180..4372-

>mRNA_Ecto-sp8_S_contig11547.1904.1 ID=mRNA_Ecto-sp8_S_contig11547.1904.1|Name=mRNA_Ecto-sp8_S_contig11547.1904.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1980bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11547:2180..4372- (Ectocarpus species8 EcLAC_412)
ATGTCGGCAGCCTTTGGCGCCCCGGCACCGCTCCCGGGGCAGCCAGGCTT
CCGGGCGAGACCTTCCGAGTCCATGGCCCGAGAAACTGCGGAGATGGAGG
AGCGTCTCTCTCGGCTCAAGACCGATCTTGCGGTCGAGGCGGAGATGAGG
GAGGCCGCGGGGCCGAGAGCGGGAAGCGCTCGATGGCGCAGCGCAAGAAT
CGACCGGGGATCCGTGCGCGCGTACGCGAAAGACGTCAAGATCCGCCACA
AGCAGCAGCTGCAGAAACGCCCACCGCATGGGATCTTCGCCAGCGCCACC
ACCGGGGGGGGGGCGGGCCTCGGGGGGAGCAAGGCTGAGCAGCGTGTTCG
TCCGAGCTCGGCCTTCGCGAGCAAGGAAGTCGCCCGATGGGGTGTAGGGG
ACACGCTGGGGTGGCTCGACAGTCTCGGGCTCGAAAAGTACAAAAGCGTC
TTTCAGCAGAACGAGATTTCGGGGACGATCTTGCTGGAGGTAGGGCTGGA
CGATCTCGACTACATGGACGTACGCGTCTTGGCGCACCGCAAGCGCATCC
TAAAAGGTATCGAGGATCTCAGGAGGGGCGGCGGAAAGAAGAGGGCATTG
GATGCTAACATGCCACCGCCCCCGGCCCCGGCGTTGGAGCTGCTGCCAAA
CCTAACCACCAGTAGTACACGTGTAAACAGGGATGAGAAGGGCCCACGGG
GGGAACGGATGGGAGAAGGAGGGGCAGCAGCAGAAACGACATCGCAAATT
GCTCAAGAAGACTGTCGCGGAGTCGACAGCCGATACTCACCCCTCAGCGG
AGGAAAGAAGCAACACTGGTCTGCGATCAAGCCGTTGTCGGAAAACCAAA
GGGATGGTGGCGGACTATCACCACCAGCGGTCAATCTTGCCGACGGACAG
TACGACGAATCGGCTGCGAGCTCCAGCTTTAAAGATGCCGTAGCAGAGTG
GCGTGGAGAAGGAAAATATTCGACAACAACGCCGGCAACAGAGGGCCGCG
CTTCCTCTTTGCATCGACCCGCCGTGGTTGGCCGTGCCCCCTTAGCTGGA
ATGCCTTCTACAGCTGAAGAAGAAACATATGAAGATATGCAGCTGGTGTT
CAATGCCAAACCGGCTAGACCAGGACTGCTGGGGGGACGAGAAGGAGGAA
GAGCAGGCATGGGGGAAGAGACAGAGTGCTGGGTTAATCCTTTCTCTTCT
CCACGGGCAGGCGAGAAGGGGGAAAACTCCCAGCTCGTAGAACTCGGTCA
TGAACCGGGAGCTTCTTCCCACGGTACGGAGACGTTGGCGGTGGCAGGTC
CCAAGCAACAACAGGAGGTGCGGGAAAAGGGGCACGACCCGGCCCTTGCT
CTTGACGAAGAAGCCGAACACGAGGCGTTCCGAAAGGCTGTGGCGGAGTG
GAACCGCGGGAAAAACACCGGCGTCACGGCCGATGGTAGCGGCGTCGGGG
ATGGCAGTGCCTCTGGTCGTGGGAACGGGGACATCAGTTCTGCTCAAACA
GCCACAGAGGTGGAGATTCCTAGCAGGCGAACGGCGGAAGCGATGGCAGA
GGAGCTGCGGAAGCAGATGGACGCCGAGCACACTTCGCAGGCGAAGGAGC
TGGAAGAAGAGAAGAGAGCGTTGCTCGAGGGCTTGGAACGTTCACGAGAA
GGGGAAACAAAGGGCGACCAACTTGAGCTGGGCGCACCCGACGAGGGAAC
GGAGGTGGAAGAGCAGGATGACGACGCAAGTTGGCGTGAAGGGGAGGATG
TTAGAAGCGTAGGATCATCTTCCGTCTGCTCGTCAACGGGGCGAAGCAGC
AACTCTGAGCGCCAGGATACGGAGGCAGATAATATTGGATGCGGTGGTCA
TGACAGCAGCAGCAGTGGTGGTGTCGAGATTGAGGTGATGGAGTCGGTGC
TTGGAGCCGACTTGTCGATTGAGGGTGGGGTGAGCTACGTCGTTGATGAA
TGTGATAGCGGCGATGAGCCACACTTTTGA
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