mRNA_Ecto-sp8_S_contig11542.1903.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11542.1903.1 vs. uniprot
Match: D8LJK3_ECTSI (SGNH_hydro domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK3_ECTSI) HSP 1 Score: 741 bits (1913), Expect = 4.880e-268 Identity = 360/373 (96.51%), Postives = 366/373 (98.12%), Query Frame = 1
Query: 1 MDAIFLALAGVLLTASPTADAAEAAPALDLSPSVGYQCWETHGVFERDCFHDETLTLDPYPLTPEMFARAIRYNTSDLSLHRAFRRARGRGVLKVVVLGGSVTYGHDCSSPAGLKGNGCAWPHRVEQWFQEEYEDLDIEVTNASVPKYGVMQFLHKLLDKALPMDLEVDLIIVDFGVNDAVIEEFEYNLEYLRMAHELLIRYVRDTMFHSPALLYAESFIAPFRSLESPWQSENMAEVHASVTQKHDIPMVSFRDAVWPHKEDYAVAQDIWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYGPLPNPSPSERELQRFKGGMGCLANPRSSVLELGNYLDGPPPEELVSVTGWSVLKLSGEAGLTGFRKDA 1119
MDA+FLALAGVLLTASPTADAAEAAPALDLS SVGYQCWETHGVFE DCFHDETLTLDPYPL PEMFARAIRY+TSDLSLHRAFRRARGRGVLKVVVLGGSVTYGHDCSSPAGLKGNGCAWPHRVEQWFQEEYEDLDIEVTNASVPKYGVMQFLHKLLDKALP+DLEVDLIIVDFGVNDAVIEEFEYNLEYLRMAHELLIRYVRDTMFHSPALLYAESFIAPFRSLESPWQSENMAEVHASVTQKHDIPMVSFRDAVWP KEDYA A+DIWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYGPLPNPSPSE+ELQRFKGGMGCLANPRSSVLELG+YLD PPPEELVSVTGWSVLKLSGEAGLTGFRK A
Sbjct: 1 MDAVFLALAGVLLTASPTADAAEAAPALDLSSSVGYQCWETHGVFECDCFHDETLTLDPYPLKPEMFARAIRYSTSDLSLHRAFRRARGRGVLKVVVLGGSVTYGHDCSSPAGLKGNGCAWPHRVEQWFQEEYEDLDIEVTNASVPKYGVMQFLHKLLDKALPVDLEVDLIIVDFGVNDAVIEEFEYNLEYLRMAHELLIRYVRDTMFHSPALLYAESFIAPFRSLESPWQSENMAEVHASVTQKHDIPMVSFRDAVWPKKEDYAAAEDIWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYGPLPNPSPSEKELQRFKGGMGCLANPRSSVLELGSYLDAPPPEELVSVTGWSVLKLSGEAGLTGFRKYA 373
BLAST of mRNA_Ecto-sp8_S_contig11542.1903.1 vs. uniprot
Match: A0A6H5JTT5_9PHAE (SGNH_hydro domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT5_9PHAE) HSP 1 Score: 655 bits (1691), Expect = 7.470e-234 Identity = 322/373 (86.33%), Postives = 343/373 (91.96%), Query Frame = 1
Query: 1 MDAIFLALAGVLLTASPTADAAEAAPALDLSPSVGYQCWETHGVFERDCFHDETLTLDPYPLTPEMFARAIRYNTSDLSLHRAFRRARGRGVLKVVVLGGSVTYGHDCSSPAGLKGNGCAWPHRVEQWFQEEYEDLDIEVTNASVPKYGVMQFLHKLLDKALPMDLEVDLIIVDFGVNDAVIEEFEYNLEYLRMAHELLIRYVRDTMFHSPALLYAESFIAPFRSLESPWQSENMAEVHASVTQKHDIPMVSFRDAVWPHKEDYAVAQDIWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYGPLPNPSPSERELQRFKGGMGCLANPRSSVLELGNYLDGPPPEELVSVTGWSVLKLSGEAGLTGFRKDA 1119
MDAIFLALAGVLLTAS TADAAEAAPALDLS S+ YQCWETHGVFERDCFHDETLTLDPYPLTPEMF RAIRY+TSDL+LHRAFRRARGRGVLKVVVLGGSVT+GH+CSSPAGL+G CAWPHRVEQWFQEE EDLDIEVTNAS+P +GVMQFL K LDK LP+DLEVDLIIVDFGVNDAVIE FEYNLE+L+MAHELLIRY+R TMFHSPALLYAESFIAP R+L+ PWQSENMAE HASVT+KHDIPMVSFRDAVWP KEDYA A+ IWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYGP NPSPSERELQRFK GMGCLANPRS++L+L YLD PPPEELVSV+G SV SG+AG TGFRKDA
Sbjct: 29 MDAIFLALAGVLLTASSTADAAEAAPALDLSSSLRYQCWETHGVFERDCFHDETLTLDPYPLTPEMFPRAIRYSTSDLTLHRAFRRARGRGVLKVVVLGGSVTFGHECSSPAGLEGIACAWPHRVEQWFQEENEDLDIEVTNASIPGFGVMQFLLKRLDKTLPVDLEVDLIIVDFGVNDAVIELFEYNLEHLKMAHELLIRYIRYTMFHSPALLYAESFIAPSRTLQVPWQSENMAEAHASVTRKHDIPMVSFRDAVWPQKEDYAAAEVIWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYGPSSNPSPSERELQRFKSGMGCLANPRSAILQLDKYLDAPPPEELVSVSGSSV---SGDAGPTGFRKDA 398
BLAST of mRNA_Ecto-sp8_S_contig11542.1903.1 vs. uniprot
Match: A0A6H5JFN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFN1_9PHAE) HSP 1 Score: 444 bits (1141), Expect = 6.140e-153 Identity = 214/223 (95.96%), Postives = 218/223 (97.76%), Query Frame = 1
Query: 451 MQFLHKLLDKALPMDLEVDLIIVDFGVNDAVIEEFEYNLEYLRMAHELLIRYVRDTMFHSPALLYAESFIAPFRSLESPWQSENMAEVHASVTQKHDIPMVSFRDAVWPHKEDYAVAQDIWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYGPLPNPSPSERELQRFKGGMGCLANPRSSVLELGNYLDGPPPEELVSVTGWSVLKLSGEAGLTGFRKDA 1119
MQFLHKLLDKALP+DLEVDLIIVDFGVNDAVIEEFEYNLEYLRMAHELLIRYVRDTMFHSPALLYAESFIAPFRSLE+PWQSENMAEVHASVTQKHDIPMVSFRDAVWPHKEDYA A+DIWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYGP PNPSPSERELQRFKGGMGCLANPRSS+LELGNYLD P PEELVSVTGWSVLKLSGEAGLTGFRK A
Sbjct: 1 MQFLHKLLDKALPVDLEVDLIIVDFGVNDAVIEEFEYNLEYLRMAHELLIRYVRDTMFHSPALLYAESFIAPFRSLEAPWQSENMAEVHASVTQKHDIPMVSFRDAVWPHKEDYAAAEDIWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYGPSPNPSPSERELQRFKGGMGCLANPRSSILELGNYLDAPTPEELVSVTGWSVLKLSGEAGLTGFRKGA 223
BLAST of mRNA_Ecto-sp8_S_contig11542.1903.1 vs. uniprot
Match: D7FNS9_ECTSI (SGNH_hydro domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNS9_ECTSI) HSP 1 Score: 291 bits (745), Expect = 2.120e-92 Identity = 152/290 (52.41%), Postives = 188/290 (64.83%), Query Frame = 1
Query: 271 GVLKVVVLGGSVTYGHDCSSPAGLKGNGCAWPHRVEQWFQEEYEDLDIEVTNASVPKYGVMQFLHKLLDKALPMDLEVDLIIVDFGVNDAVIEEFEYNLEYLRMAHELLIRYVRDTMFHSPALLYAESFIAPFRSLESPWQSENMAEVHASVTQKHDIPMVSFRDAVWPHKEDYAVAQDIWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYG-----------PLPNPSPSERELQRFKGGMGCLANPRSSVLELGNYLDGPPPEELVSVTGWSVLKLSGEAGLTGF 1107
GVLKVV +GGSVT+G +C SP GL N CAWPHR+EQWFQE+ D ++EV N +VP G++ FLHK + ALP+DL+VDL+IVDFGVNDA+++ F+ L+ ++MAHE I ++R+ M PALLYAES+I+P NMAEVHA+VTQKHDIPMV QLMADVV YY+Q S+ARFLE G PLPNPS EREL+RFK G+GCL + + LELG YL PPP ELVS GWS+L+L+G GLTGF
Sbjct: 4 GVLKVVAIGGSVTFGRNCESPNGLTFNACAWPHRLEQWFQEKVGDFEVEVVNEAVPGEGMIDFLHKTIKSALPVDLKVDLVIVDFGVNDAILDHFD--LDDVKMAHETFIGHIRNAMTSKPALLYAESYISPHLVAIHWAPGRNMAEVHANVTQKHDIPMVQ------------------------------QLMADVVVYYMQKSHARFLEANGEIACGDEVVKDPLPNPSVDERELERFKNGLGCLESTNAFELELGGYLGTPPPSELVSTNGWSILQLAGAPGLTGF 261
BLAST of mRNA_Ecto-sp8_S_contig11542.1903.1 vs. uniprot
Match: A0A6H5JFM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM8_9PHAE) HSP 1 Score: 280 bits (715), Expect = 1.130e-90 Identity = 134/140 (95.71%), Postives = 135/140 (96.43%), Query Frame = 1
Query: 1 MDAIFLALAGVLLTASPTADAAEAAPALDLSPSVGYQCWETHGVFERDCFHDETLTLDPYPLTPEMFARAIRYNTSDLSLHRAFRRARGRGVLKVVVLGGSVTYGHDCSSPAGLKGNGCAWPHRVEQWFQEEYEDLDIEV 420
MDAIFLALAGVLLTASPTADAAEAAP LDLS SVGYQCWETHGVFERDCFHDETLTLDPYPLTPEMF RAIRY+TSDLSLHRAFRRARGRGVLKVVVLGGSVTYGHDCSSP GLKGN CAWPHRVEQWFQEEYEDLDIEV
Sbjct: 56 MDAIFLALAGVLLTASPTADAAEAAPTLDLSSSVGYQCWETHGVFERDCFHDETLTLDPYPLTPEMFPRAIRYSTSDLSLHRAFRRARGRGVLKVVVLGGSVTYGHDCSSPTGLKGNDCAWPHRVEQWFQEEYEDLDIEV 195
BLAST of mRNA_Ecto-sp8_S_contig11542.1903.1 vs. uniprot
Match: D7FNS8_ECTSI (SGNH_hydro domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNS8_ECTSI) HSP 1 Score: 273 bits (699), Expect = 3.460e-86 Identity = 130/228 (57.02%), Postives = 161/228 (70.61%), Query Frame = 1
Query: 70 AAPALDLSPSVGYQCWETHGVFERDCFHDETLTLDPYPLTPEMFARAIRYNTSDLSLHRAFRRARGRGVLKVVVLGGSVTYGHDCSSPAGLKGNGCAWPHRVEQWFQEEYEDLDIEVTNASVPKYGVMQFLHKLLDKALPMDLEVDLIIVDFGVNDAVIEEFEYNLEYLRMAHELLIRYVRDTMFHSPALLYAESFIAPFRSLESPWQSENMAEVHASVTQKHDIPMV 753
A P +D++ S CWETHG +E DCFHDE L YPLT EM R + YNTS + LHRAF A+ GVLKVV +GGSVT+G C SP GL N CAWPHR++QWF+ E D +EV N +VP G++ FLHK + L +D+EVDL+IVDFGVNDA+++ F+ LE ++MAHE I +VR+ M PALLYAESFIAP + P Q NMAEVHA+VTQK+DIPMV
Sbjct: 111 AIPDIDVASSTDVLCWETHGEYELDCFHDEPLVWKQYPLTQEMLQRTVPYNTSGIHLHRAFNTAKANGVLKVVAIGGSVTFGRSCESPKGLANNACAWPHRLDQWFRAEVGDFKVEVVNEAVPGEGMIDFLHKTIKNVLSVDVEVDLVIVDFGVNDAILDHFD--LEDVKMAHETFISHVRNAMTSKPALLYAESFIAPRLASLHPPQGSNMAEVHANVTQKYDIPMV 336
BLAST of mRNA_Ecto-sp8_S_contig11542.1903.1 vs. uniprot
Match: A0A7X7N917_9BACT (SGNH/GDSL hydrolase family protein n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X7N917_9BACT) HSP 1 Score: 78.6 bits (192), Expect = 2.100e-12 Identity = 62/246 (25.20%), Postives = 108/246 (43.90%), Query Frame = 1
Query: 196 MFARAIRYNTSDLSLHRAFRRARGRGVLKVVVLGGSVTYGHDCSSPAGLKGNGCAWPHRVEQWFQEEYEDLDIEVTNASVPKYGVMQFLHKLLDKALPMDLEVDLIIVDFGVNDAVIEEFEYNLEYLRMAHELLIRYVRDTMFHSPALLYAESFIAPFRSLESPWQSENMAEVHASVTQKHDIPMVSFRDAVWPHKEDYAVA-QDIWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYGPLPNP 930
+F RA+ L F++A + VVV+GGS+T G W ++ W++ + + NA + G + +H+L D L + DL+ ++F VND + + +E ++R + PA++ N+ HA V + ++IPM+S+RDA++P + +A DI S+HP+ H A +V +L+LS+ F V G +P P
Sbjct: 30 IFQRAVANQGDPARLQHVFQKAAQGKPITVVVIGGSITQGAHAQKVE------YQWGSQMHNWWKTTFPKSTVSYHNAGIGATGSLIGVHRLSDHVLKH--KPDLVAIEFSVNDG-------DSQLTSETYEGIVRQILSQP-QQPAIVLLNMMSQ---------SGGNVQHRHAPVAKHYNIPMISYRDALFPEIKAKNIAWSDISPDSIHPNHIGHTYAAALVNLFLKLSFDEFTRV-GSVPKP 249
BLAST of mRNA_Ecto-sp8_S_contig11542.1903.1 vs. uniprot
Match: A0A0A1PTY2_9BACT (SGNH_hydro domain-containing protein n=1 Tax=bacterium YEK0313 TaxID=1522316 RepID=A0A0A1PTY2_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 1.620e-11 Identity = 78/265 (29.43%), Postives = 111/265 (41.89%), Query Frame = 1
Query: 160 TLTLDPYPLTPEMFARAIRYNTSDLSLHRAFRRARGRGVLKVVVLGGSVTYGHDCSSPAGLKGNGCAWPHRVEQWFQEEYEDLDIEVTNASV----PKYGVMQFLHKLLDKALPMDLEVDLIIVDFGVNDAVIEEFEYNLEYLRMAHELLIRYVRDTMFHSPALLYAESFIAPFRSLESPWQSE-NMAEVHASVTQKHDIPMVSFRDAVWPHKEDYAVAQ-DIWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYGPLPNPSP 936
T L L P+MFAR+ LHR F +AR + + V+GGS+T G S P ++ RVE W++ + I + NA + YG ++ LL DL+IV+F VND E Y E L+R + + PA++ L WQ N E A + + +PMVSFRDAVWP +A+ ++ VHP+ H+ A L AR E +P SP
Sbjct: 18 TAALAAPVLAPDMFARSEVALGDPARLHRIFAKARRGEPVTLGVIGGSITVGALASRPD------LSYAGRVETWWRRRFPATPIRLVNAGIGGTGSAYGALRAGEDLLAS------RPDLVIVEFAVNDGWNEGASY---------EGLLRQIL-ALPGMPAVV----------CLFMMWQGGGNSQESQARIGAHYRLPMVSFRDAVWPAMAGGRLAEAELLVDGVHPNDAGHEAAA--------LFLARLFERIDQMPVRSP 242
BLAST of mRNA_Ecto-sp8_S_contig11542.1903.1 vs. uniprot
Match: A0A7X0RQQ8_9BACL (SGNH/GDSL hydrolase family protein n=1 Tax=Cohnella nanjingensis TaxID=1387779 RepID=A0A7X0RQQ8_9BACL) HSP 1 Score: 73.6 bits (179), Expect = 1.110e-10 Identity = 65/257 (25.29%), Postives = 119/257 (46.30%), Query Frame = 1
Query: 196 MFARAIRYNTSDLSLHRAFRRARGRGVLKVVVLGGSVTYGHDCSSPAGLKGNGCAWPHRVEQWFQEEYEDLDIEVTNASVPKYGVMQFLHKLLDKALPMDLEVDLIIVDFGVNDAVIEEFEYNLEYLRMAHELLIRYVRDTMFHSPALLYAESFIAPFRSLESPWQSENMAEVHASVTQKHDIPMVSFRDAVWPHKEDYAVA-QDIWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYGP-------LPNPSPSE 942
M R+I + + +A R+AR + + + +GGS+T G S+ A + QW+++++ D IE+ NA + +H++ D+ L + + D +++D+ VND+ + L +E L+R + + + P +L F+ W VH ++ +D+PM+SF+DAVWP + + + ++ VHP+ H+L A + L+ YA L+ G LP P SE
Sbjct: 59 MSKRSIVNAGDEARIVKAMRKARRKEKVTIGFIGGSITEGAAASAEANR------YASLTFQWWKDKFPDTPIEMVNAGIGATDSYIGVHRV-DRDL-LQAKPDFVVIDYAVNDS-------DSPQLMNQYEGLVRKILQSD-NKPGVLLL--FMVHQDGTNLQW-------VHGAIGSYYDLPMISFKDAVWPQIKAGRIGWEQLFADEVHPNDAGHRLAAKFITDRLEKIYAD-LDKRGTADDAIVALPEPKTSE 289
BLAST of mRNA_Ecto-sp8_S_contig11542.1903.1 vs. uniprot
Match: UPI00190CF0AA (SGNH/GDSL hydrolase family protein n=4 Tax=Bradyrhizobium TaxID=374 RepID=UPI00190CF0AA) HSP 1 Score: 73.2 bits (178), Expect = 1.200e-10 Identity = 65/252 (25.79%), Postives = 112/252 (44.44%), Query Frame = 1
Query: 193 EMFARAIRYNTSDLSLHRAFRRARGRGVLKVVVLGGSVTYGHDCSSPAGLKGNGCAWPHRVEQWFQEEYEDLDIEVTNASVPKYGVMQFLHKLLDKALPMDLEVDLIIVDFGVNDAVIEEFEYNLEYLRMAHELLIRYVRDTMFHSPALLYAESFIAPFRSLESPWQSE-NMAEVHASVTQKHDIPMVSFRDAVWPHKEDYAVA-QDIWGHSVHPDWQVHQLMADVVAYYLQLSYARFLEVYGPL-PNPSPS 939
EM AR++ + L R F +A + + +GGS+T G + + ++ W+ + + + + V NA + G + ++ L D DL+IV+FGVNDA + + Y E L+R++ D ALL L W+ NM + A + + +D+PM+SFRDA+WP E +A +D+ VHP+ ++ A + + + +G L P P P+
Sbjct: 19 EMVARSVVSPGNTTRLKRVFAKAARGEPVTLGFIGGSITQGPPQN-----------YASQIAAWWGQRFPNASLSVVNAGLAGTGSLLGAFRVGVDLLSKD--PDLVIVEFGVNDASADAYAY---------EGLLRHILDHRTAPAALL-----------LFMMWEKGGNMQSMQAPIGRHYDLPMISFRDALWPEIEAGRLAWRDVIVDVVHPNDLGNRYAASFCTNFFEKVLRQQAATHGALTPEPLPA 237 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11542.1903.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11542.1903.1 >prot_Ecto-sp8_S_contig11542.1903.1 ID=prot_Ecto-sp8_S_contig11542.1903.1|Name=mRNA_Ecto-sp8_S_contig11542.1903.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=373bp MDAIFLALAGVLLTASPTADAAEAAPALDLSPSVGYQCWETHGVFERDCFback to top mRNA from alignment at Ecto-sp8_S_contig11542:3..2574- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11542.1903.1 ID=mRNA_Ecto-sp8_S_contig11542.1903.1|Name=mRNA_Ecto-sp8_S_contig11542.1903.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2572bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11542:3..2574- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11542:3..2574- >mRNA_Ecto-sp8_S_contig11542.1903.1 ID=mRNA_Ecto-sp8_S_contig11542.1903.1|Name=mRNA_Ecto-sp8_S_contig11542.1903.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1119bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11542:3..2574- (Ectocarpus species8 EcLAC_412)back to top |