mRNA_Ecto-sp8_S_contig1154.1900.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig1154.1900.1
Unique NamemRNA_Ecto-sp8_S_contig1154.1900.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig1154.1900.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI)

HSP 1 Score: 557 bits (1435), Expect = 5.980e-200
Identity = 271/295 (91.86%), Postives = 285/295 (96.61%), Query Frame = 1 
Query:    1 MPSFAQVTSSLLVLALAAQASGRKIQEKGGEFLRNLAETDDEAAAEWTYRATGVAGEQPYGPDDWYLGYPDCAGTKQTPINIAADIMGTATMQEQAIAFFPSECNSTELVFQSDFAVWQVDFSGCTTAPYLQYQGETYNLLQFHIHSPSEHVLGGAEYAAEIHLVHLKENTDDGLLVVGIMFEVSEYGQNVELEPMWNVMDLNQDAAEEEFMAGAYSLLPSTPSFTTYSGSLTTPPCSEGVRWIVMNEPNYMSSMQLDNYRRAVALHEGSKVSETGATNRPVQELNGRDVFYVTP 885
            MPSFAQVTSSLLVLALAAQASGRKIQEKGG  LRNLAETDDEAAAEWTYRATGV GE+PYGPDDWYLGYPDCAGTKQTPINIAAD+MGTATMQEQAIAFFPSECNSTELVF+SDFAVWQVDFSGCT APYLQYQGETYNLLQFHIHSPSEHVLGGAE+AAEIHLVHLK+NT DGLLVVGIMFEVS+YGQNVELEPMWNVMDLNQD AEE+FMA AYSLLP+TPSFTTYSGSLTTPPC+EGVRWI+M+EPNYMS+ QLDNYRRAVALHEGSKVSE GATNRP+QELNGRDV YV+P
Sbjct:    1 MPSFAQVTSSLLVLALAAQASGRKIQEKGGLRLRNLAETDDEAAAEWTYRATGVVGEEPYGPDDWYLGYPDCAGTKQTPINIAADVMGTATMQEQAIAFFPSECNSTELVFKSDFAVWQVDFSGCTDAPYLQYQGETYNLLQFHIHSPSEHVLGGAEHAAEIHLVHLKQNTTDGLLVVGIMFEVSDYGQNVELEPMWNVMDLNQDIAEEQFMAAAYSLLPATPSFTTYSGSLTTPPCTEGVRWILMSEPNYMSTWQLDNYRRAVALHEGSKVSEVGATNRPIQELNGRDVLYVSP 295
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BLAST of mRNA_Ecto-sp8_S_contig1154.1900.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA)

HSP 1 Score: 305 bits (782), Expect = 1.120e-100
Identity = 136/251 (54.18%), Postives = 186/251 (74.10%), Query Frame = 1 
Query:  127 AAAEWTYRATGVAGEQPYGPDDWYLGYPDCAGTKQTPINIAADIMGTATMQEQAIAFFPSECNSTELVFQSDFAVWQVDFSGCTTAPYLQYQGETYNLLQFHIHSPSEHVLGGAEYAAEIHLVHLKENTDDGLLVVGIMFEVSEYGQNVELEPMWNVMDLNQDAAEEEFMAGAYSLLPSTPSFTTYSGSLTTPPCSEGVRWIVMNEPNYMSSMQLDNYRRAVALHEGSKVSETGATNRPVQELNGRDVFYV 879
            AAAEWTYR T   G+QPYGP DW+ GYPDC    Q+PI++AAD+          + F+P+EC S EL+FQ+D  VW++ F GC+  P+++++GE YNLLQ HIHSPSEH++GG+E++AEIH VH+KE T+D LLVVG++F+ ++YG NVE+E +W+V+D+ +   +E F    Y ++PS P F+ Y GSLTTPPC+EGV+WIVM++P  MS MQLD +R +VAL + SKV E G TNRP Q LN R +F+V
Sbjct:   38 AAAEWTYRRTSTNGQQPYGPSDWHKGYPDCGKKAQSPIDLAADLETVVKGSAYELKFYPNECKSDELLFQADERVWEILFGGCSDVPHVEFKGERYNLLQIHIHSPSEHMIGGSEHSAEIHWVHVKEGTEDQLLVVGVLFDTTDYGSNVEIEHLWDVLDIGETTTKEVFTTRIYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMSKMQLDEFRTSVALFDDSKVDEHGNTNRPGQSLNDRKIFFV 288
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BLAST of mRNA_Ecto-sp8_S_contig1154.1900.1 vs. uniprot
Match: A0A872YNN4_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A872YNN4_SACJA)

HSP 1 Score: 236 bits (601), Expect = 3.170e-73
Identity = 115/259 (44.40%), Postives = 166/259 (64.09%), Query Frame = 1 
Query:  112 ETDDEAAAEWTYRATGVAGEQPYGPDDWYLGYPDCAGTKQTPINIAADIMGTATMQEQAIAFFPSECNSTELVFQSDFAVWQVDFSGCTTAPYLQYQGETYNLLQFHIHSPSEHVLGGAEYAAEIHLVHLKENTD---DGLLVVGIMFEVSEYGQNVELEPMWNVMDLNQDAAEEEFMAGAYSLLPSTPSFTTYSGSLTTPPCSEGVRWIVMNEPNYMSSMQLDNYRRAVALHEGSKVSETGATNRPVQELNGRDVFYV 879
            E ++ +  +WTYR     GE+PY P DW +GYPDC G  Q+PIN++A++       E  +  F +EC S EL F+++  VW++DFS CT+   L + G  Y+LLQ HIHSPSEH++ G+ + AEIHLVH ++++D     LLV+G+  +  E+G NV LEP+W+V+      A+   +   Y L+PS  +++ Y GSLTTPPCSE VRW+VM+ P  +  +QLD +R +VA    S+V E   TNRP Q +NGR V+ V
Sbjct:   40 EPEESSFPDWTYRRASHEGERPYSPSDWEIGYPDCGGDSQSPINLSANVGTLVEATEFNLELFGAECASKELDFEANGHVWEIDFSECTSTSNLSFDGGKYSLLQMHIHSPSEHMVAGSLHDAEIHLVHSRDDSDGTESELLVIGVFLDAKEHGWNVALEPLWDVLG---SGAKPRGVINPYELIPSDMAYSHYMGSLTTPPCSEIVRWVVMSTPTVIGDLQLDIFRDSVATATNSQVDERSNTNRPGQAINGRAVYIV 295
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BLAST of mRNA_Ecto-sp8_S_contig1154.1900.1 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 1.020e-50
Identity = 76/142 (53.52%), Postives = 107/142 (75.35%), Query Frame = 1 
Query:  454 VLGGAEYAAEIHLVHLKENTDDGLLVVGIMFEVSEYGQNVELEPMWNVMDLNQDAAEEEFMAGAYSLLPSTPSFTTYSGSLTTPPCSEGVRWIVMNEPNYMSSMQLDNYRRAVALHEGSKVSETGATNRPVQELNGRDVFYV 879
            ++GG+E+ AEIH VH+K  TDD LLV+G++F+ ++YG NVE+E +W+V+D+ +   +E F+   Y ++PS P F+ Y GSLTTPPC+EGV+WIVM++P  M  MQLD +R +VAL + SKV E G TNRP Q LN RD+F+V
Sbjct:    1 MIGGSEHEAEIHWVHVKAGTDDQLLVIGVLFDTTQYGSNVEIEHLWDVLDIGKPTTDEVFVTRVYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMGKMQLDEFRTSVALFDNSKVDEMGNTNRPRQSLNNRDIFFV 142
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BLAST of mRNA_Ecto-sp8_S_contig1154.1900.1 vs. uniprot
Match: H6WB77_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB77_VAULI)

HSP 1 Score: 144 bits (362), Expect = 7.410e-38
Identity = 100/255 (39.22%), Postives = 126/255 (49.41%), Query Frame = 1 
Query:  193 WYLGYPDCAGTKQTPINIAADIMGT-ATMQEQ--AIAFFPSECNSTELVFQSDFAVWQVDFSG-CTTAPYLQYQGETYNLLQFHIHSPSEHVLGGAEYAAEIHLVHLKENTDDGLLVVGIMFE-VSEYGQNVELEPMWN----VMDLNQDAAE--EEFMA-----------------GAYSLLPSTPSFTTYSGSLTTPPCSEGVRWIVMNEPNYMSSMQLDNYRRAVALHEGSKVSETGATNRPVQELNGRDVF 873
            W   YPDC G +Q+PINIA DI+ T  T+     A  F    C   +L +++D   W V F G C T P +   G  +NLLQFH+HS SEHV+GG  Y AEIH VH        L VVG+M    S+   N+E    W     V    Q A+E  E+  A                   YS+LP+  ++  Y GSLTTPPCSE V WIVM E   +S  QL+ +R  +   E   V   G   RP Q  NGR V+
Sbjct:    2 WGALYPDCLGVRQSPINIARDIVTTDCTLAPVTGAFVFDMGACMLDDLDYKADGKGWTVTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVMISSTSDNVGNLEFAKYWEHMAYVSGKQQYASEIVEKSTATMVSATASSSMSAMEQVNPYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMVY 256
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BLAST of mRNA_Ecto-sp8_S_contig1154.1900.1 vs. uniprot
Match: H6WB76_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB76_VAULI)

HSP 1 Score: 144 bits (362), Expect = 5.160e-37
Identity = 112/319 (35.11%), Postives = 150/319 (47.02%), Query Frame = 1 
Query:   31 LLVLALAAQASGRKIQEKGGEFLRNLAETD----DEAAAEWTYRATGVAGEQ-PYGPDDWYLGYPDCAGTKQTPINIAADIMGT-ATMQEQ--AIAFFPSECNSTELVFQSDFAVWQVDFSG-CTTAPYLQYQGETYNLLQFHIHSPSEHVLGGAEYAAEIHLVHLKENTDDGLLVVGIMF----------EVSEYGQNV-----ELEPMWNVMDLNQD---AAEEEFMAGA-----------YSLLPSTPSFTTYSGSLTTPPCSEGVRWIVMNEPNYMSSMQLDNYRRAVALHEGSKVSETGATNRPVQELNGRDVF 873
            L  +A AA  S R +        R L  +D      A  +W+Y       E     PD W   YPDC G +Q+PINIA DI+ T  T+     A  F    C   +L +++D   W V F G C T P +   G  +NLLQFH+HS SEHV+GG  Y AEIH VH        L VVG+M           E ++Y +++     + +    +M+ +     AA    MA +           YS+LP+  ++  Y GSLTTPPCSE V WIVM E   +S  QL+ +R  +   E   V   G   RP Q  NGR V+
Sbjct:   19 LCFVAGAALFSFRSVDSSSDALNRALMTSDCSCKPTAEFDWSYNYECNYEEHGQVAPDMWGYLYPDCLGVRQSPINIARDIVTTDCTLAPVTGAFVFDMGMCMLDDLDYKADGKGWTVTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVMISSTSDNIGNLEFTKYAEHMAYVSGKQKYASEIMETDATMAPAATPSSMASSTSMSAMEQVNPYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMVY 337
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BLAST of mRNA_Ecto-sp8_S_contig1154.1900.1 vs. uniprot
Match: A0A7S3XQ34_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ34_HETAK)

HSP 1 Score: 137 bits (344), Expect = 5.570e-35
Identity = 76/197 (38.58%), Postives = 115/197 (58.38%), Query Frame = 1 
Query:  184 PDDWYLGYPDCAGTKQTPINI-----AADIMGTATMQEQAIAFFPSECNSTELVFQSDFAVWQVDFSGCTTAPYLQYQGETYNLLQFHIHSPSEHVLGGAEYAAEIHLVHLKENTDDGLLVVGIMFEVSEYGQNVELEPMWNVM-----DLNQDAAEEEFMAGAYSLLPSTPSFTTYSGSLTTPPCSEGVRWIVMNE 744
            P++W     DCAGT Q+PIN+     ++D+ G    + +      S CN+  L+   ++  W+VD + C  A Y  ++G  Y L+QFH HSPSE+ +GG  + AE+HLVH   + +  LLV+G+MF+V +YG N      WN       D  +  + E  +     +LP+TPS+  ++GSLTTPPCSEGV WI+M++
Sbjct:   95 PENWDSVNDDCAGTSQSPINVVQASPSSDLSGLQLTKAK------SSCNAVYLI--DNYHTWKVDMTSCDDAYYATWKGTDYYLIQFHFHSPSENTIGGGYFDAEMHLVHA--SAEGELLVIGVMFDVVDYGGNHFFSQFWNNTWSDDPDWYRVVSLESNLDPYTEILPATPSYYHWNGSLTTPPCSEGVTWILMSQ 281
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BLAST of mRNA_Ecto-sp8_S_contig1154.1900.1 vs. uniprot
Match: UPI0010C96727 (carbonic anhydrase family protein n=1 Tax=Vibrio TaxID=662 RepID=UPI0010C96727)

HSP 1 Score: 132 bits (333), Expect = 7.520e-34
Identity = 93/250 (37.20%), Postives = 139/250 (55.60%), Query Frame = 1 
Query:  130 AAEWTYRATGVAGEQPYGPDDWYLGYPDC-AGTKQTPINIAADIMGTATMQEQAIAFFPSECNSTELVFQSDFAVWQVDFSGCTTAPYLQYQGETYNLLQFHIHSPSEHVLGGAEYAAEIHLVHLKENTDDGLLVVGIMFEVSEYGQNVELEPMWNVMDLNQDAAEEEFMAGAYSLLPSTPSFTTYSGSLTTPPCSEGVRWIVMNEPNYMSSMQLDNYRRAVALHEGSKVSETGATNRPVQELNGRDVFY 876
            A+EW     G +G+Q  GP+ W+     C  G  Q+PI+I+  I      + + I F  +   S E V  +   + QV+F+G  +   ++ +G++Y+LLQFH H+PSE+++ G  Y  E+HLVH  EN +  L VVG+MFE  E   N ELE +W+VM  N+   + +       LLP    +  ++GSLTTPPCSEGV W+VM  P  +S  QL+ +R    L+ G+        NRP Q++N R V +
Sbjct:   22 ASEW-----GYSGKQ--GPEHWH---GICQTGKNQSPIDISKGIES----ELEPIKF--NYDVSGENVVNNGHTI-QVNFNGDQS---IEVEGKSYSLLQFHFHAPSENLIKGHSYPLEVHLVHADENKN--LAVVGVMFE--EGATNPELEKVWDVMPANKGQQDLQHSINLTGLLPKQSDYFRFNGSLTTPPCSEGVTWLVMKNPITISKAQLEKFR---TLYSGN--------NRPTQDVNARPVLF 236
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BLAST of mRNA_Ecto-sp8_S_contig1154.1900.1 vs. uniprot
Match: A0A836C9F5_9STRA (Alpha carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F5_9STRA)

HSP 1 Score: 135 bits (341), Expect = 7.840e-34
Identity = 87/274 (31.75%), Postives = 142/274 (51.82%), Query Frame = 1 
Query:  118 DDEAAAEWTYRAT--GVAGEQPYGPDDWYLG--YPDCAGTKQTPINIAADIM---GTATMQEQAIAFF----PSECNSTELVFQSDFAVWQVDFSGC--TTAPYLQYQG----ETYNLLQFHIHSPSEHVLGGAEYAAEIHLVHLKENTDDGLLVVGIMFEVSEYGQNVELEPMWNVMD------LNQDAAEEEFMAGAYSLLPSTPSFTTYSGSLTTPPCSEGVRWIVMNEPNYMSSMQLDNYRRAVALHEGSKVSETGATNRPVQELNGRDV 870
            DD  A +WTY     G        P DW+    Y  CAG +Q+PI+I    +   G ++  E   AF        C  ++LV  +  A+ ++ +  C  +T P LQY G     +Y L Q H+H+ SEH + G   AAE+HLVH+ E     +LV+ ++ +V+E  +  E+   W +M+        + A +   ++  Y+LLP +  + TY GSLT PPC+E V ++++ E   ++  QL  +R++  +  G  + ++G+  RP+Q LNGR V
Sbjct:   77 DDPTALDWTYNPVCYGDGSYTVLAPADWHKNEDYAACAGPRQSPIDIVTSTLNDLGCSSDNEYLPAFSWQLQSGSCPFSQLVPSTKHAL-ELSYEECDDSTRPGLQYSGALGHSSYKLKQVHLHAGSEHSVDGQFGAAELHLVHINEADSTDILVLAVLLDVAETSEEPEVYKYWTLMNEAVANYQGESAIDMNAISDPYALLPESKQYYTYQGSLTIPPCTETVTFVILAERTQVADAQLQAFRQSQTIAFGPTLDQSGSNARPLQPLNGRSV 349
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1154.1900.1 vs. uniprot
Match: A0A7S4D4V5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4V5_HETAK)

HSP 1 Score: 131 bits (329), Expect = 3.170e-33
Identity = 87/246 (35.37%), Postives = 128/246 (52.03%), Query Frame = 1 
Query:   25 SSLLVLAL-AAQASGRKIQEKGGEFLRNLAETDDEAAAEWTYRATGVAGEQPYGPDDWYLGYPDCAGTKQTPINIAADIMGTATMQEQAIAFFPSECNSTELVFQSDFAVWQVDFSGCTTAPYLQYQGETYNLLQFHIHSPSEHVLGGAEYAAEIHLVHLKENTDDGLLVVGIMFEVSEYGQNVELEPMWNVMDLNQDAAEEEFMAGAY-----SLLPSTPSFTTYSGSLTTPPCSEGVRWIVMNE 744
            + LLVLAL AAQA    + + G    R       +A    T       GE+   P++WY    DCAG  Q+PIN+      T T+ +  +     +C+   LV   ++  W+VD S C  +    +    Y L+QFH HSPSE+ +GG  + AE+HLVH   + D  LLV+G+MF+V +YG N   +  WN    +    + E    +       +LP+  S+  ++GSLTTPPCSEGV WI+M++
Sbjct:    2 NQLLVLALLAAQAC---MVQAGFTSYRYWVYNQADAINAGTNCGDYSGGEEACSPENWYAYAEDCAGESQSPINVVQASPST-TLSQLVLNKNNEDCDLLYLV--DNYHTWKVDMSECDGSYTTTWNDVDYELVQFHFHSPSENTIGGGYFDAEMHLVHA--DADSNLLVIGVMFDVVDYGGNNFFKEFWNNTWSDVSTGDSEVSLSSTLDPYTEILPADLSYYHWNGSLTTPPCSEGVTWILMSQ 239
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1154.1900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB10_ECTSI5.980e-20091.86Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
F6MHT6_SACJA1.120e-10054.18Carbonic anhydrase n=1 Tax=Saccharina japonica Tax... [more]
A0A872YNN4_SACJA3.170e-7344.40Carbonic anhydrase n=1 Tax=Saccharina japonica Tax... [more]
Q9SMD6_9PHAE1.020e-5053.52Carbonic anhydrase alpha type (Fragment) n=1 Tax=L... [more]
H6WB77_VAULI7.410e-3839.22Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID... [more]
H6WB76_VAULI5.160e-3735.11Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID... [more]
A0A7S3XQ34_HETAK5.570e-3538.58Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma ... [more]
UPI0010C967277.520e-3437.20carbonic anhydrase family protein n=1 Tax=Vibrio T... [more]
A0A836C9F5_9STRA7.840e-3431.75Alpha carbonic anhydrase n=1 Tax=Tribonema minus T... [more]
A0A7S4D4V5_HETAK3.170e-3335.37Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1154contigEcto-sp8_S_contig1154:1093..7632 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score561.6
Seed ortholog evalue2.2e-157
Seed eggNOG ortholog2880.D8LB10
Model size888
KEGG rclassRC02807
KEGG koko:K01672,ko:K01674,ko:K04413
KEGG ReactionR00132,R10092
KEGG Pathwayko00910,map00910
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005623,GO:0042597,GO:0044464
Exons11
EggNOG free text desc.carbonate dehydratase activity
EggNOG OGsCOG3338@1,KOG0382@2759
EC2.7.11.1,4.2.1.1
Cds size888
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1154.1900.1prot_Ecto-sp8_S_contig1154.1900.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig1154 1093..7632 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143224.6951568-CDS-Ecto-sp8_S_contig1154:1092..11671681143224.6951568-CDS-Ecto-sp8_S_contig1154:1092..1167Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1154 1093..1167 -
1681143224.7072072-CDS-Ecto-sp8_S_contig1154:1670..17661681143224.7072072-CDS-Ecto-sp8_S_contig1154:1670..1766Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1154 1671..1766 -
1681143224.7160158-CDS-Ecto-sp8_S_contig1154:2156..22971681143224.7160158-CDS-Ecto-sp8_S_contig1154:2156..2297Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1154 2157..2297 -
1681143224.7240694-CDS-Ecto-sp8_S_contig1154:2579..26991681143224.7240694-CDS-Ecto-sp8_S_contig1154:2579..2699Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1154 2580..2699 -
1681143224.7324638-CDS-Ecto-sp8_S_contig1154:3112..32111681143224.7324638-CDS-Ecto-sp8_S_contig1154:3112..3211Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1154 3113..3211 -
1681143224.7411556-CDS-Ecto-sp8_S_contig1154:3501..35851681143224.7411556-CDS-Ecto-sp8_S_contig1154:3501..3585Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1154 3502..3585 -
1681143224.7505188-CDS-Ecto-sp8_S_contig1154:4164..42491681143224.7505188-CDS-Ecto-sp8_S_contig1154:4164..4249Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1154 4165..4249 -
1681143224.760162-CDS-Ecto-sp8_S_contig1154:4811..48781681143224.760162-CDS-Ecto-sp8_S_contig1154:4811..4878Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1154 4812..4878 -
1681143224.7695773-CDS-Ecto-sp8_S_contig1154:5668..56931681143224.7695773-CDS-Ecto-sp8_S_contig1154:5668..5693Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1154 5669..5693 -
1681143224.7784853-CDS-Ecto-sp8_S_contig1154:6954..69901681143224.7784853-CDS-Ecto-sp8_S_contig1154:6954..6990Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1154 6955..6990 -
1681143224.7871957-CDS-Ecto-sp8_S_contig1154:7572..76321681143224.7871957-CDS-Ecto-sp8_S_contig1154:7572..7632Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1154 7573..7632 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig1154.1900.1

>prot_Ecto-sp8_S_contig1154.1900.1 ID=prot_Ecto-sp8_S_contig1154.1900.1|Name=mRNA_Ecto-sp8_S_contig1154.1900.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=296bp
MPSFAQVTSSLLVLALAAQASGRKIQEKGGEFLRNLAETDDEAAAEWTYR
ATGVAGEQPYGPDDWYLGYPDCAGTKQTPINIAADIMGTATMQEQAIAFF
PSECNSTELVFQSDFAVWQVDFSGCTTAPYLQYQGETYNLLQFHIHSPSE
HVLGGAEYAAEIHLVHLKENTDDGLLVVGIMFEVSEYGQNVELEPMWNVM
DLNQDAAEEEFMAGAYSLLPSTPSFTTYSGSLTTPPCSEGVRWIVMNEPN
YMSSMQLDNYRRAVALHEGSKVSETGATNRPVQELNGRDVFYVTP*
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mRNA from alignment at Ecto-sp8_S_contig1154:1093..7632-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig1154.1900.1 ID=mRNA_Ecto-sp8_S_contig1154.1900.1|Name=mRNA_Ecto-sp8_S_contig1154.1900.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6540bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1154:1093..7632- (Ectocarpus species8 EcLAC_412)
ATGCCTTCCTTCGCGCAAGTGACTTCGTCATTGCTGGTGCTGGCCCTTGC
AGCACAGGCGGTGAGTGACGAGATGGTGTTCTGCTGCTCCCATGGTACAG
ACCCGTACGTATCCCTGGCCCGCGAACATTCAGAGGCATGCGTATGCAAC
GGTGTCGGTATGTGTTTTGGAGCTACAGCGATGCTGTGGTCGCGTGTCTC
AGCTCGTGTACGGGTAGCGGTGAAGGGACACCACCTCTCATGGGTAGTGG
ACATGGCGAGGTTGTCGCGCTAGTCGTCGGCTGCTCAGCTTGGAGCCGAT
ACGTATCTGGCCATTTTTGTAGCTCAAAAATCCCGACGGCCCCAACATTG
TTGTCGCGGACTCGCAGACACCTCATGACCTTTCTGCTTTCTTGCCGCCT
TCCTTCCCAGTGCCTACCTTGCCACGCATCATCTCTGGATCCGAGCGGCG
ATGTCTACGCCTTGCCCTCGCCCAATCCTCTAACCGTGCGCCACTGCTGC
TGCTGCTGATGATGCTGCTGCTGCTGCTGTTTTCATGCATGCCGACAATA
CGCATGTACGCGCGTGCTTTGTCCCGCTTATGTTCTTCGGGATCCGTTCA
TGCCTCTTCACGCCACGCGACGTATTGCCACGCATCATTCAGAGCGGCCG
CAAGATCCAAGAGAAGGGAGGTGAGTTCGTGTGTGGCAGTCGTCGTTCCA
GACGCTCACGGCGGACGAAAGCGTGATGTGGTTGATTTCTATATTTTGCG
CGGCAACGCCGAGAAGTACACTGTCTTCCGAGGTCCCTCTGGCTGCCGCC
CAAATGGCCTGTCTGTAGATATCAGTATCCGCCCGATGAGGTCAACACGG
ATACGTGATGGCCCACTCTCTGCTCCTTCTCGCTGCAAGTGCCGTACGCA
CGGCATCATCGTACGTACGAGCGAGAGCTGCGAAGTTAAGACGGTCTCAC
GTATGCACGTGCTTCTCGGCATACGTGGGCTGCGGGATGGTTTTCTTCAT
TCACTTCAGGTCCCTTGGATGATGCGTATCCGAATGCATACGTGGAACTC
GCATATGTTAATACATGCATACGTGGGACACGCACATTTTTTTTTGTTCA
ACATCTATACGCATGCGTGCATGGATAAGATCCGTGTATCTTGCCCTAAC
CTTTCGGCTCCCCTGCTGCTCTCTTGTCCCCCACCCCTGCGTATACGGCG
CGCTCCGGACTCCTCGCGGTCGGTGTTTTCTCTACTGGCCGTTGGTGGCG
CCTCTTCTGAAGGGCTCCGGGTAAGAGGAGATGAATTTTTCCAAGACATT
CGTACAGGGAACACAGAGATGATGTACACAGCAGTACAACAGACGAGGCT
TTTGATGTGCCCAACCCACGTGTTTTCTTGCATATTAAATACGCCGTCGT
GTTTAGCGTGGCCGTTCAAACTGTGACATTTCGTTTTTGCAAAAAAAGGT
GGTTATGTCCCAGCGACACAGCACAGTGCGGACGCGGCACCAACCAATGG
CGTTGCATTTGCATGCACCAGTGGGATACCGTACGTGTGGTATGTAGATC
CGGTGGGATACCATACGTACGTGTGGTAGATAACCAATGCATTACTTGCA
TTTTCTCCATTAATGTATCCACGGTTGTGGGATACCATACGTACGTGTGG
TAGATAACCAATGCATCACAGTTGGTGTCTAGTTGCCCGCAAGTTCTCGC
TCCGACCTGCTGCGGCTGCGGCCGCCACTCGTTGAAGACTAAGGGGACTA
ACTTTCGAAACGCACTTTTTCGCTTCCTCGTTCCCCTCACGATATTCTCT
GGGGGGGTCTGGAACTGGGACCGCGCGCTCTCTCCGGATCCGGAACGACA
TTTTTTTTTCCTGGCGGGCAATCACGTGCCACGGCGTGAACCGTGCGACC
GACGCCTGGATCAAATATTTTCTCGTTCCGTCGTCGCAGCTACGCAACCT
CGCCGAGACTGACGGTAAGGCCTGCGAGCGCCGGAACGAGCCGATTGGTC
GCTGCGCACATACTAGGACACTTATATACGAACACAGAAAGACTGCCCGC
ACGCGTTCATACATATATTACGGACGAGCACGCGCTTCTCTCTCGACGAG
TGTTGTAGTGTTGCCTGTGTTTTCCGGAGTTGTTCTGATGTTTCTTGTTG
ACAGCAGCTTGTGCTTTGGTTGTTCCTGTTCTTGTTGGTTGTTTGGTGTT
GACAGTTTTTTTCGTTGGTTGTTTCTTGTTCGCAGGTTGTTGCTGCTGTT
GTTCTTGTTTGTTGGGTCTCCCGTAGTGTGTCGCGGGGTCATGGCGGCTG
GCGACGTTGTTTCATGAAAGCTTGTACGGTGGGGCGTGCATCTGTTGGTT
GTTGTTCGCAGGTTGTTGTTGTTCTTGTTTCTTGCGTCTCCCGTGCGTGG
TGTGTGTTTCGTTTTTGTGGCTATGGGCATCGCAAAATATCTCGCCGTTG
TTCCCCTGCGGACAATCCGTGTTGTGAGAGTGTCGCGGGGTCATGGCAGC
TGGCGACGTTGTTCCATGAAAGCTTGTACGGTGGGGCGTGCATCTCCCCT
CTGCAAAGTTGTTTTCGTGGACGTCCAGAGGGGTGTTTACTCCCTAGTAT
ATATAAGGTATTCCTACTGTTCTCTGACGTGCGGGGGTCACCTCCCCTGG
ATCCCTATATGCGAGCATTAACAACAAACCATGACCGTGACCCTATTCTT
GCCGTACCGTTTTCTCGTGCGCTGCATGAACCTTCCTTGCCTGCACGCCA
TCAGACGAAGCTGCCGCGGAATGGACTTACCGCGCGACGGGAGTCGCAGG
GGAACAGCCGTACGGCCCAGAGTAAGTAACCTTTTTTTTTTTTTCTGTTG
TTGGATATTCTTTCTCCCCTTTGGCGTTCTCTTTTTTCGACGTATGCTAT
AATAGATTGTTGGTGATTGTGGCTTTCCTCCCGTCGTATTTTTCATGTTG
TATCCTACATTATTGGTTGAGTGTTGCTTTCCTCGGACAGGCGTCCTGCC
CATGCCCTGGAGATTATTTTGTCCCTTCTGTGAGTGTTGATCAGGTCTCT
CTCTCGTATCGGGCTTTACGCTTAGCTGAACTCCGAGACCTCAGGGTGCA
CTTCGGTGTGATGGCGAGCTATAAAAATCCATTCCCGCATTAGTCGTGCC
TGGTTTGTGCTTTTGACTGCAGATGGTGATGTTGTTTAGTACGTCTCCGC
TGCTTCTATGATGCGATTATACACTAGTCATAAACAGCAGTACACCCCCT
GGCGGAGATTGAGCACCTGTGTTTCGTGTCTTCCTCGCTTCTACAACAAT
ATTGTTGCGTGTCGATTTTTTCTTTTCCTTACCCCACATGATCCCCTTTC
GTGTTCTCCCTAATCCGGTGAACCCACGTGCAGCGACTGGTACTTGGGAT
ACCCCGACTGCGCAGGGACGAAGCAGACGCCAATCAACATCGCCGCAGAC
ATCATGGGCACGGCTACCGTGAGTGGTGTTGAGTTACATGCAAAGAATGT
TATGAACAGTGTTGATGAAGGCGGGCAGCATGTCGATGTTGAGCACGCAA
AACGAAGAAATGCATCGACGTGTGGCGCGGTCGAGTCGCGTGCTCGATCA
TGACGAGACATGCGTGGAGCAGCTGGTTGCCAGGAAACGGGCGCGTGCCT
CGAACGGATCCAAAGTGTACCAGGCCATGCAGAGATACGTGTATGTATGT
AAACCTAGGTATAAGCATCGTACAGGTTGACAGGAACCGGCGTGGACGGA
TCATGCACCGCGCCATGTATGGGTAGCACCAACACCCACGAATGTTCACT
TGTTCCCTCCGAGAACTTCTCATCCTTGGGAGAACGTCTGGTCTCCGTGC
GAAACCACGTCTTTGGGTGTGGATGGAAATCAAAATCACTGGAAGTGACG
CAGAGGAGCTTCGCGTCCGGGAGGTCCCCGCGCGGAGGGGGGCTGCGGAA
CTGGGTTCCGCCGCCCCTCCCGAGCCGTTTGTACCATCGTGGGTTCACTC
TTGGAAGCACCGACCGCCCCCGCGTGACCCGCCCCTCGGAATTACAGATG
CAGGAGCAGGCCATCGCGTTCTTCCCTAGCGAGTGCAACTCGACCGAGTT
GGTCTTCCAGTCGGACTTCGCCGTGTGGCAGGTGAGAAGAGGGGAGGGGG
GTGATATCATTGGTGTGTGTACCTTCGGCACGTTCCACTAGATCCAGGGT
TAAGTTTTTGCCATCTGGTGTGCTCTTACAGCGAACACGTTTAGTCCCTT
GGTAACCCTTGCTGCGTGGCGTCTTTGAATAGCTTTGACCGTTTTTCTGC
GGCTTGTAATTGTTTTGTTATTTTTTGTAAGCGGTTTCAGCACTTTGCTT
GCTTCTCTGCTACAACGTCCACATATATATTTTTTTCTTGTTGGCTTGTT
GGCCTTCTTGTGTCTCTCCAGGTTGACTTCTCCGGGTGCACCACTGCGCC
TTACCTTCAGTACCAGGGCGAGACCTACAACCTTCTCCAGTTCCACATCC
ACTCGCCCTCCGAGCACGTGGTGAGTGCTGACCCGGTGTATCTCCTGTCG
CCGTTGACTCGCGCACCGGAGTCTGATGGGTGATACACCCCTGGAAGCAC
CCGGGGAGAGATGCGCTTGCGCAGCAGCTGCAGGACGCCCTTGATTCGCA
TGCGTGGTGTTTGAAGAAGTACACGGCACCATCGAAATGTGGCGTCTTCT
TTACTTGCCCGCTTGGCCTCCGTGAAATCCCGCGTGCCGCCTGTGAAACT
GTGTCACGTACAGGAAAGAAGCTTCAGACTACGGTAGAAGTACTCAAAAG
TCATCCATCACGTGGTGGCGATTTTGCGCCGAATTTTTCGACGATCGAGT
CGAGAGACGCCGTTTCGTGACGTGACGCACCGTCCCGTCTGATAACCTGA
CATCTGTCCTTTCGCTCGCTCCTGTCCACTCAGCTCGGTGGCGCAGAATA
CGCGGCGGAGATCCACCTGGTTCACCTCAAGGAGAACACCGACGACGGGT
TGCTCGTAGTGGGGATCATGTTCGAAGTCAGCGAGTACGGCCAGAACGTT
GAGGTGAGACCCAGGGAGAATGTCACGGGGCGCAGCAGATACATGGCGGG
TGTGCGCTTCTGACAACCCAGTGGAGATGGTTCTGATTTATTTTGTTGTT
TTGTTATTTTCGGGGATTGCCAGTTATAACCCCCTCTAGGAGCTTCCCAC
GTCCGTCCATAGCGTGATCGGTCACTGATCGGTCACTGACACCGGGCATC
CTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCTCGCACCCGACGACAGCTGGAGCCCATGTGG
AACGTGATGGACTTGAACCAGGACGCAGCCGAGGAGGAGTTCATGGCCGG
GGCGTACTCGCTCTTGCCCTCTACCCCTAGCTTCACCACCTACTCCGGGT
CGCTCACCACCCCCCCGTGCTCCGAGGTGGGTGTAACCTTTCGCGTGCGA
AGCCTACTGTAGCATGCGAACGCGGCTGATGGTGCTGACTCTGTAATCGT
CCGGTGGCGTGCTCTGCTGTTGCGTTGGGTGAAGAGCGTTCAAATAATCT
GGAAACAATTAAGTTCATTAGTTCTCTACATAATTATTACGTTCAATTGT
TTGGTTGGTTTCTGAGGCACCAGGGTAGGATGGCGGCGGTTGTACCCCCC
TGCCGTCGTTCGTGCGTGTATTTAAGGAGCTGGCTACAGTACATCCCTTG
CCATGAGTAAGATGACACGACACAAGACACGGGATGAAGGCAAATTACAC
GCGATATTTTCTTCCAACAATAAACTCACTCGGGTGCAACCCAAACGTCC
TTTTTTTTCTTGGCAGGGCGTGAGGTGGATCGTCATGAACGAGCCCAACT
ACATGAGCTCGATGCAGCTGGACAACTACCGCCGCGCGGTTGCGTTGCAC
GAGGGCTCCAAGGTGCGTCGCCTCTGTTGTTTGTTATTTGATGGTGTTGA
TGGTTATAAATAATTGAGCGTATACCGTAAGGATGCGAGTCTCCGCACAG
GGGTGTTGGCGTTTTTCAAAGCTTAACCACTCGACAACTAGGAAGGCAAC
ACAGCCGAAAAAGGCGGTTTTGGAATTATCTCATCGAGCTCTTTCCTTAG
ACGTGTTGTTTGACCTTCGCACCCTCCTAGTTGCGGAGTAAGAAAACTTT
CAAAAACGCCAACACCCCTGCGCGGAGACCCGCATCCTTACGGTAGGCTA
TAATAAACTCGAATTAAGCCGAGTTCCACCCGTTTGTTCTCCCACCCGCT
GCAAGGGCCGATGAAACCTGCCCTTCTGTGGTGGTGTTTCAAACGGTTGG
TCGTTTTAGAGCTAAGCTGTCGGTCACGAAGGAAAAACATCGCGAAATGG
AGAACACAGCCGTCGTTCCTAACACGTGCCACCCTCCCTCTCCCGTTCCG
TGTCGTTACCGTTAGGTGAGCGAGACGGGCGCCACCAACCGCCCCGTCCA
GGAGCTCAACGGTCGCGACGTTTTCTACGTGACCCCTTAG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1154:1093..7632-

>mRNA_Ecto-sp8_S_contig1154.1900.1 ID=mRNA_Ecto-sp8_S_contig1154.1900.1|Name=mRNA_Ecto-sp8_S_contig1154.1900.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=888bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1154:1093..7632- (Ectocarpus species8 EcLAC_412)
ATGCCTTCCTTCGCGCAAGTGACTTCGTCATTGCTGGTGCTGGCCCTTGC
AGCACAGGCGAGCGGCCGCAAGATCCAAGAGAAGGGAGGTGAGTTCCTAC
GCAACCTCGCCGAGACTGACGACGAAGCTGCCGCGGAATGGACTTACCGC
GCGACGGGAGTCGCAGGGGAACAGCCGTACGGCCCAGACGACTGGTACTT
GGGATACCCCGACTGCGCAGGGACGAAGCAGACGCCAATCAACATCGCCG
CAGACATCATGGGCACGGCTACCATGCAGGAGCAGGCCATCGCGTTCTTC
CCTAGCGAGTGCAACTCGACCGAGTTGGTCTTCCAGTCGGACTTCGCCGT
GTGGCAGGTTGACTTCTCCGGGTGCACCACTGCGCCTTACCTTCAGTACC
AGGGCGAGACCTACAACCTTCTCCAGTTCCACATCCACTCGCCCTCCGAG
CACGTGCTCGGTGGCGCAGAATACGCGGCGGAGATCCACCTGGTTCACCT
CAAGGAGAACACCGACGACGGGTTGCTCGTAGTGGGGATCATGTTCGAAG
TCAGCGAGTACGGCCAGAACGTTGAGCTGGAGCCCATGTGGAACGTGATG
GACTTGAACCAGGACGCAGCCGAGGAGGAGTTCATGGCCGGGGCGTACTC
GCTCTTGCCCTCTACCCCTAGCTTCACCACCTACTCCGGGTCGCTCACCA
CCCCCCCGTGCTCCGAGGGCGTGAGGTGGATCGTCATGAACGAGCCCAAC
TACATGAGCTCGATGCAGCTGGACAACTACCGCCGCGCGGTTGCGTTGCA
CGAGGGCTCCAAGGTGAGCGAGACGGGCGCCACCAACCGCCCCGTCCAGG
AGCTCAACGGTCGCGACGTTTTCTACGTGACCCCTTAG
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