mRNA_Ecto-sp8_S_contig11536.1897.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: A0A6H5KY11_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KY11_9PHAE) HSP 1 Score: 516 bits (1330), Expect = 1.070e-180 Identity = 256/262 (97.71%), Postives = 256/262 (97.71%), Query Frame = 1
Query: 10 EKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
EKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKA R AARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDV EREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL
Sbjct: 283 EKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKA---RGGAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVGEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 541
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: A0A836CAR6_9STRA (Propionyl-CoA carboxylase beta chain mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR6_9STRA) HSP 1 Score: 389 bits (998), Expect = 1.200e-130 Identity = 185/259 (71.43%), Postives = 219/259 (84.56%), Query Frame = 1
Query: 19 PVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
PVR T D+R+R +LR ++PQD N+PYDM +VSKV+DDN +++IMPD+A+NI VGF RMEG VG+VANNP LAGCLDI+SSTK ARFVRFCD+FNIPLLTFVDVPGFLPGT QE+GGIIRHG+KLL+A+AEA+VPK+TVITRKAYGGAYDVMSSKHLRGD+NY+WP GE+AVMGAKGAVEIIFRGKDVA RE EY +LFCNP+ AA+RGF+D +IDPA TR LC+DL+ LR+K +FPKKH N PL
Sbjct: 270 PVRSTCDTRERAIPALRRIIPQDPNIPYDMVEIVSKVLDDNNFYQIMPDYAKNIVVGFGRMEGRTVGVVANNPSSLAGCLDINSSTKG-------ARFVRFCDSFNIPLLTFVDVPGFLPGTDQEYGGIIRHGAKLLYAYAEATVPKITVITRKAYGGAYDVMSSKHLRGDVNYSWPGGEIAVMGAKGAVEIIFRGKDVAAREAEYADLFCNPLNAAKRGFLDAVIDPASTRARLCEDLEALRNKQPLSFPKKHGNGPL 521
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: A0A7S3HMU7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMU7_9STRA) HSP 1 Score: 371 bits (952), Expect = 1.760e-126 Identity = 186/260 (71.54%), Postives = 211/260 (81.15%), Query Frame = 1
Query: 16 PPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
P R T DSR R++ESLR+ +P D NVPYDM VV KVVD+ EIMP++A+NI GFARMEG VGIVANNP LAGCLDIDSS KA ARFVRF D+FNIP++TFVDVPGFLPGT QEHGGIIR+G+KLL+A+AEA+VPK+TVITRKAYGGAYDVM+SKHL+GD NYAWPS EVAVMGAKGAVEIIFRGK+V E+ EYTE F NPMVAA RGFVDDIIDPA+TR LC+DL+LLR K +KH NIPL
Sbjct: 72 PAPRPTHDSRHRIEESLRFQVPDDPNVPYDMLEVVKKVVDEGVVTEIMPNYAKNIICGFARMEGRTVGIVANNPGHLAGCLDIDSSIKA-------ARFVRFLDSFNIPIVTFVDVPGFLPGTVQEHGGIIRNGAKLLYAYAEATVPKITVITRKAYGGAYDVMASKHLKGDYNYAWPSAEVAVMGAKGAVEIIFRGKNVDEKTTEYTERFANPMVAAERGFVDDIIDPAVTRERLCEDLELLRTKNVTRPWRKHGNIPL 324
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: A0A7S1ZPW7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZPW7_9STRA) HSP 1 Score: 367 bits (943), Expect = 4.140e-126 Identity = 179/259 (69.11%), Postives = 208/259 (80.31%), Query Frame = 1
Query: 19 PVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
P + T DS R ++L+YL+P D N PYDMKHV+S +VD++ +FEI+P++A NI FARMEG VGIVANNP+ LAGCLDI SSTKA ARFVRFC+AFNIP++T VDVPGFLPG QEHGGIIRHG+KLLFA+AEA+VPK+TVITRKAYGGAYDVMSSKHLRGD NYAW EVAVMGAKGAVEIIFRGKDV + EY + F NPMV A+RGFVDDII+P TRRILC DL+LLR+K +KH+NIPL
Sbjct: 7 PSKPTEDSPSRSCDALKYLVPDDPNTPYDMKHVISSIVDNHDFFEILPNYASNIVTAFARMEGQTVGIVANNPLTLAGCLDIGSSTKA-------ARFVRFCNAFNIPIVTLVDVPGFLPGVGQEHGGIIRHGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDCNYAWSGAEVAVMGAKGAVEIIFRGKDVEQNTAEYQQRFANPMVCAQRGFVDDIIEPEETRRILCDDLRLLRNKKMDVHKRKHSNIPL 258
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: A0A7S2FK64_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FK64_9STRA) HSP 1 Score: 363 bits (932), Expect = 3.330e-123 Identity = 178/259 (68.73%), Postives = 211/259 (81.47%), Query Frame = 1
Query: 19 PVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
PV +T D RDRV+ SLR+L+P D+NV YDM +++KVVD N+ FEIMP+ A+NI GFARMEG V ++ANNP+ LAGCLDID+S KA ARFVRF +AFNIP+LTFVDVPGFLPGT QEH GIIRHG+KLLFA+AEA+VPK+TVITRKAYGGAYDVMSSKHLRGD NYAWP+ E+AVMGAKGAVEIIFRG DV + YTE F NP++AA+RGFVDDIIDPA TR +C+DL+LLR K +KH+N+PL
Sbjct: 89 PVVQTEDVRDRVEPSLRHLVPDDANVGYDMCSIINKVVDRNSLFEIMPNAAKNIVTGFARMEGRTVAVIANNPLHLAGCLDIDASVKA-------ARFVRFANAFNIPILTFVDVPGFLPGTDQEHDGIIRHGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDFNYAWPAAEIAVMGAKGAVEIIFRGGDVEKETLNYTEKFANPLLAAQRGFVDDIIDPAETRVRICEDLELLRSKDLGEVSRKHSNVPL 340
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: W7T2I2_9STRA (Carboxyl transferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2I2_9STRA) HSP 1 Score: 367 bits (942), Expect = 1.070e-121 Identity = 177/262 (67.56%), Postives = 212/262 (80.92%), Query Frame = 1
Query: 10 EKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
+KPP +T+DSR R + LRYL P D N PY+M+ VV KVVD+ FEIMP +A+NI GFARMEGHPV ++ANNP LAGCLDIDSS KA ARFVRF DAFN+P+LTFVDVPGFLPG QEH GIIR+G+KLLFA+AEA+VPK+TVITRKAYGGAYDVMSSKHLRGD N+AWP E+AVMG KGAVEIIFRGKDV EYTE F NPMVAA RG++D++IDPA+TR+ LC++L++LR+K + P+KH+N+PL
Sbjct: 304 QKPPSVQTADSRYRQEACLRYLCPDDPNHPYEMREVVKKVVDEGEVFEIMPAFAQNIFTGFARMEGHPVAVIANNPAHLAGCLDIDSSVKA-------ARFVRFADAFNLPILTFVDVPGFLPGVDQEHSGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMGPKGAVEIIFRGKDVEANTLEYTERFANPMVAAARGYIDEVIDPAMTRQHLCEELEVLRNKSVENPPRKHSNVPL 558
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: A0A5A8EFN3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EFN3_CAFRO) HSP 1 Score: 365 bits (937), Expect = 4.940e-121 Identity = 181/254 (71.26%), Postives = 204/254 (80.31%), Query Frame = 1
Query: 34 SDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
+DS R + L L+P D NVPYDMK VV +V+D+ +FEIMPD+A+NI VGF RM+G VG+V N PM LAGCLDIDSS KA ARFVRFCDAFNIPLLTFVDVPGFLPGT QEHGGIIRHG+KLL+A+AEASVPKLTVITRKAYGGAYDVMSSKHLRGD NYAWPS ++AVMGAKGAVEIIFRGKD+ +RE EYTE F NP+ AA RGFVD +I PA TRR+LC+DL +L K KKH NIPL
Sbjct: 305 NDSATRSCDMLEGLVPTDPNVPYDMKVVVREVLDERNFFEIMPDYAKNIIVGFGRMDGRTVGVVGNQPMELAGCLDIDSSVKA-------ARFVRFCDAFNIPLLTFVDVPGFLPGTGQEHGGIIRHGAKLLYAYAEASVPKLTVITRKAYGGAYDVMSSKHLRGDGNYAWPSAQIAVMGAKGAVEIIFRGKDLEKRELEYTEKFANPLRAAERGFVDAVISPAATRRVLCEDLAILSTKKRDAPKKKHGNIPL 551
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: G4Z179_PHYSP (Uncharacterized protein n=5 Tax=Peronosporaceae TaxID=4777 RepID=G4Z179_PHYSP) HSP 1 Score: 363 bits (932), Expect = 2.280e-120 Identity = 176/262 (67.18%), Postives = 212/262 (80.92%), Query Frame = 1
Query: 10 EKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
EKPPVRK+ D R+R +L ++P D NVPY+MK +++++VD +FEIMPD+A+NI VGF RMEG VGIVAN PM LAGCLDI+SS K ARFVRFCD+FNIP++T VDVPGFLPGT QE+GGIIRHG+KLL+A+AEA+VPK+T+ITRKAYGGAYDVMSSKHLRGD+NYAWPS E+AVMGAKGAVEIIFRG++V E +Y + F NPMVAA+RGFVDDII+P TRR +C+DL +L K K KKH NIPL
Sbjct: 290 EKPPVRKSDDDRNRPVPTLESIVPPDPNVPYNMKDIINQIVDSFDFFEIMPDYAKNIIVGFGRMEGRVVGIVANQPMELAGCLDINSSVKG-------ARFVRFCDSFNIPIVTLVDVPGFLPGTDQEYGGIIRHGAKLLYAYAEATVPKITIITRKAYGGAYDVMSSKHLRGDINYAWPSAEIAVMGAKGAVEIIFRGQNVEENTADYEKKFANPMVAAQRGFVDDIIEPVNTRRHICEDLDMLETKDVKNPWKKHGNIPL 544
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: B7FZ17_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZ17_PHATC) HSP 1 Score: 364 bits (934), Expect = 3.390e-120 Identity = 174/259 (67.18%), Postives = 209/259 (80.69%), Query Frame = 1
Query: 19 PVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
PV++T+D DR+ SL L+P D N PY+MK V+ + VD+ +FEIMP A+NI FARMEGH VG++ NNP+ LAGCLDID+S KA ARFVRFCDAFNIPL+TFVDVPGFLPGT QE+GGIIRHG+KLLFA+AEA+VPK+TVITRKAYGGAYDVMSSKHLRGD NYAWP EVAVMGAKGAV+I++ GKDV + K+YT F NPMV+A+RGFVD+IIDP TRRI+C DL++LR K P+KH+N+PL
Sbjct: 330 PVKETTDPADRLVPSLERLVPDDPNTPYNMKDVIRETVDNGDFFEIMPAMAQNIVTAFARMEGHTVGVIGNNPLTLAGCLDIDASIKA-------ARFVRFCDAFNIPLVTFVDVPGFLPGTGQEYGGIIRHGAKLLFAYAEANVPKVTVITRKAYGGAYDVMSSKHLRGDCNYAWPGAEVAVMGAKGAVKILYGGKDVEQHTKDYTSRFANPMVSAQRGFVDNIIDPQETRRIICNDLRMLRTKHLPNIPRKHSNLPL 581
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: H3G8A8_PHYRM (Uncharacterized protein n=6 Tax=Oomycota TaxID=4762 RepID=H3G8A8_PHYRM) HSP 1 Score: 361 bits (927), Expect = 4.780e-120 Identity = 176/262 (67.18%), Postives = 211/262 (80.53%), Query Frame = 1
Query: 10 EKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
EKPPVRK+ D R+R +L ++P D NVPY+MK ++ ++VD +FEIMPD+A+NI VGF RMEG VGIVAN PM LAGCLDI+SS K ARFVRFCD+FNIP++T VDVPGFLPGT QE+GGIIRHG+KLL+A+AEA+VPK+T+ITRKAYGGAYDVMSSKHLRGD+NYAWPS E+AVMGAKGAVEIIFRG++V E +Y + F NPMVAA+RGFVDDII+P TRR +C+DL +L K K KKH NIPL
Sbjct: 257 EKPPVRKSDDDRNRPVPTLESIVPPDPNVPYNMKDIIHQLVDSFDFFEIMPDYAKNILVGFGRMEGRVVGIVANQPMELAGCLDINSSVKG-------ARFVRFCDSFNIPIVTLVDVPGFLPGTDQEYGGIIRHGAKLLYAYAEATVPKITIITRKAYGGAYDVMSSKHLRGDINYAWPSAEIAVMGAKGAVEIIFRGQNVEENTADYEKKFANPMVAAQRGFVDDIIEPVNTRRHICEDLDVLETKDVKNPWKKHGNIPL 511 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11536.1897.1 >prot_Ecto-sp8_S_contig11536.1897.1 ID=prot_Ecto-sp8_S_contig11536.1897.1|Name=mRNA_Ecto-sp8_S_contig11536.1897.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=266bp MYTEKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFback to top mRNA from alignment at Ecto-sp8_S_contig11536:2133..5839- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11536.1897.1 ID=mRNA_Ecto-sp8_S_contig11536.1897.1|Name=mRNA_Ecto-sp8_S_contig11536.1897.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3707bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11536:2133..5839- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11536:2133..5839- >mRNA_Ecto-sp8_S_contig11536.1897.1 ID=mRNA_Ecto-sp8_S_contig11536.1897.1|Name=mRNA_Ecto-sp8_S_contig11536.1897.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=798bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11536:2133..5839- (Ectocarpus species8 EcLAC_412)back to top |