mRNA_Ecto-sp8_S_contig11536.1897.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig11536.1897.1
Unique NamemRNA_Ecto-sp8_S_contig11536.1897.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: A0A6H5KY11_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KY11_9PHAE)

HSP 1 Score: 516 bits (1330), Expect = 1.070e-180
Identity = 256/262 (97.71%), Postives = 256/262 (97.71%), Query Frame = 1
Query:   10 EKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
            EKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKA   R  AARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDV EREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL
Sbjct:  283 EKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKA---RGGAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVGEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 541          
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: A0A836CAR6_9STRA (Propionyl-CoA carboxylase beta chain mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR6_9STRA)

HSP 1 Score: 389 bits (998), Expect = 1.200e-130
Identity = 185/259 (71.43%), Postives = 219/259 (84.56%), Query Frame = 1
Query:   19 PVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
            PVR T D+R+R   +LR ++PQD N+PYDM  +VSKV+DDN +++IMPD+A+NI VGF RMEG  VG+VANNP  LAGCLDI+SSTK        ARFVRFCD+FNIPLLTFVDVPGFLPGT QE+GGIIRHG+KLL+A+AEA+VPK+TVITRKAYGGAYDVMSSKHLRGD+NY+WP GE+AVMGAKGAVEIIFRGKDVA RE EY +LFCNP+ AA+RGF+D +IDPA TR  LC+DL+ LR+K   +FPKKH N PL
Sbjct:  270 PVRSTCDTRERAIPALRRIIPQDPNIPYDMVEIVSKVLDDNNFYQIMPDYAKNIVVGFGRMEGRTVGVVANNPSSLAGCLDINSSTKG-------ARFVRFCDSFNIPLLTFVDVPGFLPGTDQEYGGIIRHGAKLLYAYAEATVPKITVITRKAYGGAYDVMSSKHLRGDVNYSWPGGEIAVMGAKGAVEIIFRGKDVAAREAEYADLFCNPLNAAKRGFLDAVIDPASTRARLCEDLEALRNKQPLSFPKKHGNGPL 521          
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: A0A7S3HMU7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMU7_9STRA)

HSP 1 Score: 371 bits (952), Expect = 1.760e-126
Identity = 186/260 (71.54%), Postives = 211/260 (81.15%), Query Frame = 1
Query:   16 PPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
            P  R T DSR R++ESLR+ +P D NVPYDM  VV KVVD+    EIMP++A+NI  GFARMEG  VGIVANNP  LAGCLDIDSS KA       ARFVRF D+FNIP++TFVDVPGFLPGT QEHGGIIR+G+KLL+A+AEA+VPK+TVITRKAYGGAYDVM+SKHL+GD NYAWPS EVAVMGAKGAVEIIFRGK+V E+  EYTE F NPMVAA RGFVDDIIDPA+TR  LC+DL+LLR K      +KH NIPL
Sbjct:   72 PAPRPTHDSRHRIEESLRFQVPDDPNVPYDMLEVVKKVVDEGVVTEIMPNYAKNIICGFARMEGRTVGIVANNPGHLAGCLDIDSSIKA-------ARFVRFLDSFNIPIVTFVDVPGFLPGTVQEHGGIIRNGAKLLYAYAEATVPKITVITRKAYGGAYDVMASKHLKGDYNYAWPSAEVAVMGAKGAVEIIFRGKNVDEKTTEYTERFANPMVAAERGFVDDIIDPAVTRERLCEDLELLRTKNVTRPWRKHGNIPL 324          
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: A0A7S1ZPW7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZPW7_9STRA)

HSP 1 Score: 367 bits (943), Expect = 4.140e-126
Identity = 179/259 (69.11%), Postives = 208/259 (80.31%), Query Frame = 1
Query:   19 PVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
            P + T DS  R  ++L+YL+P D N PYDMKHV+S +VD++ +FEI+P++A NI   FARMEG  VGIVANNP+ LAGCLDI SSTKA       ARFVRFC+AFNIP++T VDVPGFLPG  QEHGGIIRHG+KLLFA+AEA+VPK+TVITRKAYGGAYDVMSSKHLRGD NYAW   EVAVMGAKGAVEIIFRGKDV +   EY + F NPMV A+RGFVDDII+P  TRRILC DL+LLR+K      +KH+NIPL
Sbjct:    7 PSKPTEDSPSRSCDALKYLVPDDPNTPYDMKHVISSIVDNHDFFEILPNYASNIVTAFARMEGQTVGIVANNPLTLAGCLDIGSSTKA-------ARFVRFCNAFNIPIVTLVDVPGFLPGVGQEHGGIIRHGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDCNYAWSGAEVAVMGAKGAVEIIFRGKDVEQNTAEYQQRFANPMVCAQRGFVDDIIEPEETRRILCDDLRLLRNKKMDVHKRKHSNIPL 258          
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: A0A7S2FK64_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FK64_9STRA)

HSP 1 Score: 363 bits (932), Expect = 3.330e-123
Identity = 178/259 (68.73%), Postives = 211/259 (81.47%), Query Frame = 1
Query:   19 PVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
            PV +T D RDRV+ SLR+L+P D+NV YDM  +++KVVD N+ FEIMP+ A+NI  GFARMEG  V ++ANNP+ LAGCLDID+S KA       ARFVRF +AFNIP+LTFVDVPGFLPGT QEH GIIRHG+KLLFA+AEA+VPK+TVITRKAYGGAYDVMSSKHLRGD NYAWP+ E+AVMGAKGAVEIIFRG DV +    YTE F NP++AA+RGFVDDIIDPA TR  +C+DL+LLR K      +KH+N+PL
Sbjct:   89 PVVQTEDVRDRVEPSLRHLVPDDANVGYDMCSIINKVVDRNSLFEIMPNAAKNIVTGFARMEGRTVAVIANNPLHLAGCLDIDASVKA-------ARFVRFANAFNIPILTFVDVPGFLPGTDQEHDGIIRHGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDFNYAWPAAEIAVMGAKGAVEIIFRGGDVEKETLNYTEKFANPLLAAQRGFVDDIIDPAETRVRICEDLELLRSKDLGEVSRKHSNVPL 340          
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: W7T2I2_9STRA (Carboxyl transferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2I2_9STRA)

HSP 1 Score: 367 bits (942), Expect = 1.070e-121
Identity = 177/262 (67.56%), Postives = 212/262 (80.92%), Query Frame = 1
Query:   10 EKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
            +KPP  +T+DSR R +  LRYL P D N PY+M+ VV KVVD+   FEIMP +A+NI  GFARMEGHPV ++ANNP  LAGCLDIDSS KA       ARFVRF DAFN+P+LTFVDVPGFLPG  QEH GIIR+G+KLLFA+AEA+VPK+TVITRKAYGGAYDVMSSKHLRGD N+AWP  E+AVMG KGAVEIIFRGKDV     EYTE F NPMVAA RG++D++IDPA+TR+ LC++L++LR+K  +  P+KH+N+PL
Sbjct:  304 QKPPSVQTADSRYRQEACLRYLCPDDPNHPYEMREVVKKVVDEGEVFEIMPAFAQNIFTGFARMEGHPVAVIANNPAHLAGCLDIDSSVKA-------ARFVRFADAFNLPILTFVDVPGFLPGVDQEHSGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMGPKGAVEIIFRGKDVEANTLEYTERFANPMVAAARGYIDEVIDPAMTRQHLCEELEVLRNKSVENPPRKHSNVPL 558          
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: A0A5A8EFN3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EFN3_CAFRO)

HSP 1 Score: 365 bits (937), Expect = 4.940e-121
Identity = 181/254 (71.26%), Postives = 204/254 (80.31%), Query Frame = 1
Query:   34 SDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
            +DS  R  + L  L+P D NVPYDMK VV +V+D+  +FEIMPD+A+NI VGF RM+G  VG+V N PM LAGCLDIDSS KA       ARFVRFCDAFNIPLLTFVDVPGFLPGT QEHGGIIRHG+KLL+A+AEASVPKLTVITRKAYGGAYDVMSSKHLRGD NYAWPS ++AVMGAKGAVEIIFRGKD+ +RE EYTE F NP+ AA RGFVD +I PA TRR+LC+DL +L  K      KKH NIPL
Sbjct:  305 NDSATRSCDMLEGLVPTDPNVPYDMKVVVREVLDERNFFEIMPDYAKNIIVGFGRMDGRTVGVVGNQPMELAGCLDIDSSVKA-------ARFVRFCDAFNIPLLTFVDVPGFLPGTGQEHGGIIRHGAKLLYAYAEASVPKLTVITRKAYGGAYDVMSSKHLRGDGNYAWPSAQIAVMGAKGAVEIIFRGKDLEKRELEYTEKFANPLRAAERGFVDAVISPAATRRVLCEDLAILSTKKRDAPKKKHGNIPL 551          
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: G4Z179_PHYSP (Uncharacterized protein n=5 Tax=Peronosporaceae TaxID=4777 RepID=G4Z179_PHYSP)

HSP 1 Score: 363 bits (932), Expect = 2.280e-120
Identity = 176/262 (67.18%), Postives = 212/262 (80.92%), Query Frame = 1
Query:   10 EKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
            EKPPVRK+ D R+R   +L  ++P D NVPY+MK +++++VD   +FEIMPD+A+NI VGF RMEG  VGIVAN PM LAGCLDI+SS K        ARFVRFCD+FNIP++T VDVPGFLPGT QE+GGIIRHG+KLL+A+AEA+VPK+T+ITRKAYGGAYDVMSSKHLRGD+NYAWPS E+AVMGAKGAVEIIFRG++V E   +Y + F NPMVAA+RGFVDDII+P  TRR +C+DL +L  K  K   KKH NIPL
Sbjct:  290 EKPPVRKSDDDRNRPVPTLESIVPPDPNVPYNMKDIINQIVDSFDFFEIMPDYAKNIIVGFGRMEGRVVGIVANQPMELAGCLDINSSVKG-------ARFVRFCDSFNIPIVTLVDVPGFLPGTDQEYGGIIRHGAKLLYAYAEATVPKITIITRKAYGGAYDVMSSKHLRGDINYAWPSAEIAVMGAKGAVEIIFRGQNVEENTADYEKKFANPMVAAQRGFVDDIIEPVNTRRHICEDLDMLETKDVKNPWKKHGNIPL 544          
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: B7FZ17_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZ17_PHATC)

HSP 1 Score: 364 bits (934), Expect = 3.390e-120
Identity = 174/259 (67.18%), Postives = 209/259 (80.69%), Query Frame = 1
Query:   19 PVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
            PV++T+D  DR+  SL  L+P D N PY+MK V+ + VD+  +FEIMP  A+NI   FARMEGH VG++ NNP+ LAGCLDID+S KA       ARFVRFCDAFNIPL+TFVDVPGFLPGT QE+GGIIRHG+KLLFA+AEA+VPK+TVITRKAYGGAYDVMSSKHLRGD NYAWP  EVAVMGAKGAV+I++ GKDV +  K+YT  F NPMV+A+RGFVD+IIDP  TRRI+C DL++LR K     P+KH+N+PL
Sbjct:  330 PVKETTDPADRLVPSLERLVPDDPNTPYNMKDVIRETVDNGDFFEIMPAMAQNIVTAFARMEGHTVGVIGNNPLTLAGCLDIDASIKA-------ARFVRFCDAFNIPLVTFVDVPGFLPGTGQEYGGIIRHGAKLLFAYAEANVPKVTVITRKAYGGAYDVMSSKHLRGDCNYAWPGAEVAVMGAKGAVKILYGGKDVEQHTKDYTSRFANPMVSAQRGFVDNIIDPQETRRIICNDLRMLRTKHLPNIPRKHSNLPL 581          
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Match: H3G8A8_PHYRM (Uncharacterized protein n=6 Tax=Oomycota TaxID=4762 RepID=H3G8A8_PHYRM)

HSP 1 Score: 361 bits (927), Expect = 4.780e-120
Identity = 176/262 (67.18%), Postives = 211/262 (80.53%), Query Frame = 1
Query:   10 EKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRDKPAKTFPKKHNNIPL 795
            EKPPVRK+ D R+R   +L  ++P D NVPY+MK ++ ++VD   +FEIMPD+A+NI VGF RMEG  VGIVAN PM LAGCLDI+SS K        ARFVRFCD+FNIP++T VDVPGFLPGT QE+GGIIRHG+KLL+A+AEA+VPK+T+ITRKAYGGAYDVMSSKHLRGD+NYAWPS E+AVMGAKGAVEIIFRG++V E   +Y + F NPMVAA+RGFVDDII+P  TRR +C+DL +L  K  K   KKH NIPL
Sbjct:  257 EKPPVRKSDDDRNRPVPTLESIVPPDPNVPYNMKDIIHQLVDSFDFFEIMPDYAKNILVGFGRMEGRVVGIVANQPMELAGCLDINSSVKG-------ARFVRFCDSFNIPIVTLVDVPGFLPGTDQEYGGIIRHGAKLLYAYAEATVPKITIITRKAYGGAYDVMSSKHLRGDINYAWPSAEIAVMGAKGAVEIIFRGQNVEENTADYEKKFANPMVAAQRGFVDDIIEPVNTRRHICEDLDVLETKDVKNPWKKHGNIPL 511          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11536.1897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY11_9PHAE1.070e-18097.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAR6_9STRA1.200e-13071.43Propionyl-CoA carboxylase beta chain mitochondrial... [more]
A0A7S3HMU7_9STRA1.760e-12671.54Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1ZPW7_9STRA4.140e-12669.11Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2FK64_9STRA3.330e-12368.73Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W7T2I2_9STRA1.070e-12167.56Carboxyl transferase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A5A8EFN3_CAFRO4.940e-12171.26Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
G4Z179_PHYSP2.280e-12067.18Uncharacterized protein n=5 Tax=Peronosporaceae Ta... [more]
B7FZ17_PHATC3.390e-12067.18Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
H3G8A8_PHYRM4.780e-12067.18Uncharacterized protein n=6 Tax=Oomycota TaxID=476... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11536contigEcto-sp8_S_contig11536:2133..5839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score516.2
Seed ortholog evalue9.4e-144
Seed eggNOG ortholog2880.D8LQL0
Model size798
KEGG rclassRC00097,RC00367,RC00609,RC00942
KEGG koko:K01966,ko:K01969
KEGG ReactionR01859,R04138
KEGG Pathwayko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200
KEGG ModuleM00036,M00373,M00741
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.CoA carboxylase activity
EggNOG OGsCOG4799@1,KOG0540@2759
EC2.1.3.15,6.4.1.3,6.4.1.4
Cds size798
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11536.1897.1prot_Ecto-sp8_S_contig11536.1897.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig11536 2133..5839 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143224.551487-CDS-Ecto-sp8_S_contig11536:2132..22701681143224.551487-CDS-Ecto-sp8_S_contig11536:2132..2270Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11536 2133..2270 -
1681143224.5627935-CDS-Ecto-sp8_S_contig11536:2874..29921681143224.5627935-CDS-Ecto-sp8_S_contig11536:2874..2992Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11536 2875..2992 -
1681143224.5717769-CDS-Ecto-sp8_S_contig11536:3423..35421681143224.5717769-CDS-Ecto-sp8_S_contig11536:3423..3542Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11536 3424..3542 -
1681143224.5806627-CDS-Ecto-sp8_S_contig11536:4284..44241681143224.5806627-CDS-Ecto-sp8_S_contig11536:4284..4424Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11536 4285..4424 -
1681143224.5896993-CDS-Ecto-sp8_S_contig11536:4897..50541681143224.5896993-CDS-Ecto-sp8_S_contig11536:4897..5054Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11536 4898..5054 -
1681143224.5998378-CDS-Ecto-sp8_S_contig11536:5713..58391681143224.5998378-CDS-Ecto-sp8_S_contig11536:5713..5839Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11536 5714..5839 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig11536.1897.1

>prot_Ecto-sp8_S_contig11536.1897.1 ID=prot_Ecto-sp8_S_contig11536.1897.1|Name=mRNA_Ecto-sp8_S_contig11536.1897.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=266bp
MYTEKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYF
EIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKAKVQRKQ
AARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEAS
VPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIF
RGKDVAEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLLRD
KPAKTFPKKHNNIPL*
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mRNA from alignment at Ecto-sp8_S_contig11536:2133..5839-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig11536.1897.1 ID=mRNA_Ecto-sp8_S_contig11536.1897.1|Name=mRNA_Ecto-sp8_S_contig11536.1897.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3707bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11536:2133..5839- (Ectocarpus species8 EcLAC_412)
ATGTACACAGAAAAGCCCCCAGTGAGGAAAACGAGTGACTCTCGTGACCG GGTTGATGAATCGCTGAGGTACTTGCTTCCGCAAGACTCTAACGTCCCGT ACGACATGAAGCACGTTGTCTCCAAGGTGTGGTAACGTGGGAACTTACAG TGGTAACGTATGAGCAGCATAAGGATGACAAAGCACACGTACTTAAATGC ATGTATGCGCATGGCCAACGCATGGCCAACACATGTAAGGTTATGAAAGC GCGTCGTTCCGAGCTTCACAGCAAGCTTCTTTTCAACAACGATTCTACTG AACACGGAGAGCTCCTGCCATGCCTCAGGAAAAAGGCGAAATACCGGAGG GTAGCCCCAGTACCGCACATTCCAGTCGTTCTCGTCCCATCCATTGTGCC ATATCTCCTTTAGCCTCTTTACAATATGGGTCAGAGCCGGAGTCATCACC ATTGCCACCATTTTTCTTTCTTCGGAGCATGCTTGTGAATTTGTTGCCTG CAGTGTCCTCGCCAATGCTTGTATTCCAAATTTGCACACGACGGGACCGT CTACACTTAGTCGAGACAGGCTTTATCGAAGAATATTGGACTCCGCAGGC GGCTCCGAAGTAGCCTTCCTGCAACCTTACGTGTCCAAGACAAAACAATT TCGCCATGCCTATGTTAGTCCTACGATGTTTCAGGCCCGCAGAACTGCCT TCCATTTGCTGAGTACGTGATCGAGTCAAAGTGTACAAGAAGTTGACTAC TTTGTGGTGGAACACGCGGATTTTTTTTTCCGCAGGTTGTGGACGATAAC ACTTACTTCGAGATCATGCCGGACTGGGCAAGGAACATCACTGTGGGATT TGCCCGGATGGAGGGACATCCAGTGGGGATCGTGGCAAACAACCCGATGT TCTTGGCCGGCTGTCTCGACATTGACTCTTCCACCAAGGCAAGTCCAAGT CCAAGCCTAGGTCAAAGCTACGGCCAAGGTCGACCGTCTTGTCGCTGGTC GTGTTCGATTAATGTGTTTCTGTACCGTTTGCGAGACTGGTATCGTGGAC GGCTTTCGTATCTCGTTCTTCAATACACCATCTACCGTGCGTTTGGTCTT AACCCTAAGAAAAGTGGGGTGACACGCTCACTCCTTCTTTTTTCTCATGG TCGGAGTCCTCCCATTTTATGTTCTCGATGCTCGCGCTATTTTTGGTTTC CCGTCTGTTCATAACCGAGATAACTTGAGTCGTCTATACATCCTAAGGAA AAAGACTTGGTCCCCCCTACGATTTAAGTATAGGATTCTATTTTTTGCTC ATCTTTATTTCGGTGCATGGTGCCAAACGTAGGCAAGCTATGCGTATTCT CCCTCTTCCTGATGCACTGGAGCATGAACAACGTTCCTCTTGAGGAGAAA GTGCACTGACCCCAGAGGTGCAACGAAAACAGGCGGCTCGATTCGTTCGC TTTTGCGACGCGTTCAACATCCCTCTGCTGACGTTCGTCGACGTGCCGGG GTTCTTGCCGGGAACTGCGCAAGAGCACGGAGGCATTATCAGACACGGAT CCAAGGTGGGGGCACGGTGCTGGATGAAAGAGGTTGACATGTTCTTATCC ACAGGTCTTTCTGGTTGTGATTTTACGTGTAGCAGAAGGTGCATACCAAA CATGGATTGCATTGACTGCCTGTCCGAATGGCGCGTGTATCGCCAGCATT GTGCACATGGAAACGTGTTGCGTTTGGGCTTGGGTATTCGGACACCACTT TTGCGTGCACAGCCTCAATATACAGGCCTTGCTTGAAACGAAAGACTAAC ACAACGAAAAGTACTTCCCGAGGACGATCGAATGGTCGGAGCCTGTTTCG ATGGGCGGATCGCATCTCACTCAGTGGGCATGCGCGTTTGCACGATATAC GTCCTTCTAAGACATGCACACAGCGGTGCCTCCTTCGCCAGCTGTGGCAT GGTCGTGTGCCACATTATCCAGCACAAACTGCTGTGGTGAGAACCACCAG ATACAAGAGGACTCGCCCAGAGGGTAAATTTCTTCGGCGACGTTTGGCTG ATTGCTCCGTTGTCGCGTTTTCGGACTCGCTGTGTGTGTACGTATATAGT TTTCGCTTCCTTTCCTTACCCTACCCTTTCATCCGTCCGGCACACCGGCT TAACTCTAGTCGACTGCTATCGTGCTAGGCATGGGCAAGGGGAAGACATT CGACCGTCCTCCAATCACCTCCCTGAACCCCTTTCCAACCGCAACCCCTC CGGCCGCACTTGAAATCTCCCCCTTTCGCACGATCGCCACATGGCAGCTG CTGTTCGCGTTCGCGGAGGCTTCTGTGCCGAAGCTGACGGTAATCACACG CAAGGCTTACGGCGGCGCCTACGACGTCATGAGCTCGAAGCACCTGAGAG GAGACATGAACTACGCGTGAGTACACTTCCCTGCACCCCTGCGCTCGGCC TCAACCCATCCAACTCCAACCGTAGCCTCAGCTAGCAATGACCCAGAAGA GAAGGTAGCCTGACCACGGACCATGCCGTATGCGGCACATGAAATCACCC CCACACACAAGACCACGTCCGGTGTGCAATACTATTGCCGGCCGACTTGA GCCCAAAACATAAAAAACCACTCTCAGATCAAGCAATAGGGCGACATAGG ATACCACGCACCCCACAATACCACACCCGATGGCAATGGGTTTAGAAGCC AAGCGTTGTTGTTGTTGTTGTTGTTGTTGTCACCGGGGTGTGTTTTCTTG TGTCGCATATCACACGGTAGGTTTCTTGCTGTCGCTTGGTGTTTTAGTCG ACTCAATCCCTACCGCGTGTCCCCTACCCCCGTGCTGGGGACCGAAGGTG GCCGTCGGGAGAAGTCGCCGTGATGGGTGCGAAGGGCGCCGTGGAGATCA TCTTCAGAGGCAAAGACGTGGCCGAGCGGGAGAAGGAGTACACGGAGCTC TTCTGCAACCCGATGGTGAGGAGGAGAACTTTATTTTTTTGGCTTGAATC GCGGAGTAGCTGCTCATTTCGACAGATAGAGAAAGGAAGGTTACTTGTAG TCCTTCTTTAGGGTGAGAGGCATGGAACGGGAAGAAGGTATCTTCCGTGG GTGTCTTTCCTCAGATAATGGCATAATTACAGGGCGGGGGGGGGGGTTCG CTACGCCTCGAATTTTATCCGCCGATGACCGCAGTCCACCTTCTTCGTTC AAGCGGTAGGGCGCTCGATGACTTCCTGTTTTTGACGTGTTGCTCTTGGT GGGGAAGTAATCTCGTCAGGGGTTGAGAAGTAATCTAGTCGGGGGTTGAG AGTTATCGCGGGTCGTGCCCATCACCTCTATACCCGCATTGCTGGTCCCC TCCTACGTGGCTCGGTAGAAATGTCCCGACTGATCGCGCGGAATCGGATC TCTGGACACGCTTGCCATGTGCTTTGTCTTGTGCGTTCCGTTCAGGCTAC CACGCGCAGGAGCTCGTGGATAGCACAATGAGTTCTCACCTACTCTAGAG TATCCTACATCTCCTCACCTCCTGACGGGCGCTACTTTCGTTGACTATGT TGCTTATTGCTGCACTCAGGTTGCCGCTCGCCGAGGGTTCGTCGACGACA TCATCGACCCCGCCTTGACACGCCGAATACTGTGCCAAGACCTGCAGCTT TTGCGAGACAAGCCTGCGAAGACGTTCCCCAAGAAGCACAACAATATTCC GCTCTGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11536:2133..5839-

>mRNA_Ecto-sp8_S_contig11536.1897.1 ID=mRNA_Ecto-sp8_S_contig11536.1897.1|Name=mRNA_Ecto-sp8_S_contig11536.1897.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=798bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11536:2133..5839- (Ectocarpus species8 EcLAC_412)
ATGTACACAGAAAAGCCCCCAGTGAGGAAAACGAGTGACTCTCGTGACCG
GGTTGATGAATCGCTGAGGTACTTGCTTCCGCAAGACTCTAACGTCCCGT
ACGACATGAAGCACGTTGTCTCCAAGGTTGTGGACGATAACACTTACTTC
GAGATCATGCCGGACTGGGCAAGGAACATCACTGTGGGATTTGCCCGGAT
GGAGGGACATCCAGTGGGGATCGTGGCAAACAACCCGATGTTCTTGGCCG
GCTGTCTCGACATTGACTCTTCCACCAAGGCAAAGGTGCAACGAAAACAG
GCGGCTCGATTCGTTCGCTTTTGCGACGCGTTCAACATCCCTCTGCTGAC
GTTCGTCGACGTGCCGGGGTTCTTGCCGGGAACTGCGCAAGAGCACGGAG
GCATTATCAGACACGGATCCAAGCTGCTGTTCGCGTTCGCGGAGGCTTCT
GTGCCGAAGCTGACGGTAATCACACGCAAGGCTTACGGCGGCGCCTACGA
CGTCATGAGCTCGAAGCACCTGAGAGGAGACATGAACTACGCGTGGCCGT
CGGGAGAAGTCGCCGTGATGGGTGCGAAGGGCGCCGTGGAGATCATCTTC
AGAGGCAAAGACGTGGCCGAGCGGGAGAAGGAGTACACGGAGCTCTTCTG
CAACCCGATGGTTGCCGCTCGCCGAGGGTTCGTCGACGACATCATCGACC
CCGCCTTGACACGCCGAATACTGTGCCAAGACCTGCAGCTTTTGCGAGAC
AAGCCTGCGAAGACGTTCCCCAAGAAGCACAACAATATTCCGCTCTGA
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