mRNA_Ecto-sp8_S_contig1148.1844.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1148.1844.1 vs. uniprot
Match: D8LT38_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT38_ECTSI) HSP 1 Score: 2259 bits (5855), Expect = 0.000e+0 Identity = 1265/1358 (93.15%), Postives = 1291/1358 (95.07%), Query Frame = 1
Query: 4 QTFMKYCRFGDRRNTGRMVVAKLAALCKDAGIIDKRFPVQRVEISFSRLKPRDLSYLPYSSFLAALDDIGTQHPDLRRLADAAAAAAQEESVAVLVRAVPGATTAVSSLVEADRGSGVGKKSKRPYNRSARGGATSPTNADGKRSRAENSRTPTTENRAEKAAKLSGRPGAAGAKSPAGGGATAKVAGAKAAXXXXXAETAEVECLGGFRPDDQSLLVLLQKFVFVNSQAGKEACSEMEAEGRGARRRALDRLEAAAVVVQACVARGCSGRALAREASGRRDLHRHNTRLNWAATLLQTRRVKTHSKTRPGVARMRAFTARTRAAKVAVKRYYRCLDGLTGAEYYFDPRTGKSSWTKPKILGKFDISTAVVVPAGEEIMVPMCHECAXXXXXXXXXXXXXXXXXXXXVDRIHRTGNASTHLRVPIDXXXXXXXXXXXXXXXXXGDNFCVSCFAYLHRKGRIRRHTFEPLVGMCHDCGDRAQAFQCFGCDAEGRLLLCKRCLEARHHYLLPDQLADHRIEAVGLRSLKVKRLKEEQLSRARELWMKAESAEAGKRSRDKKMLAAAIKIQAVWRGYLARKRRRYLMDQHLLWKIQRHKDDQIRKKFTYKVARYFGKARLLKSDTNQEIVLKQYPRWWQSTIMDIVRPTFGWHEGAKMVREQEFFAKKTKRKGRWKVHAARLRLGGELIRLRIETRKQRKYERLHDKAVGVYQHARAKGGVSADHKEELQQNSRKAKRAVQNQEQEREKAEERVKAAENALEALIGPFRLRNNVRAAVTKGMLMPFPVSMQKGKANARLEKGQNMREASDAAIMFMFCRVLKWMPYGRRVRVEPTDPSSVYFLPEAEAGACPRPPSHAFGPFYVVGVKESRQNDKKDKAAAAAASALAGNLASKEPGDTKERPATGLGSGAAATTPAESFGEGGTAAGADGGEDSAVDLKAQSSPVLILDRQWLLEEAPLCQAYAMPILP----ILMMLRTGIRDSSVVQVAIKVAVVGTHQHRDRLERWQQTKFDDDSDMHARLERWAAGSEARSKRLMLRRRKLFDVEEGFQPEKRRVMEAVESVLALWTSLQEMTDFAKSAAATGLASTQGADGKGMIGGKLGREVVVQLFKKWVQSDDRTKVIIMHRSGKGANEPAVEVVQVVGYIKADLDTPTPVLREFIRRFCGGWLNEHAKGDHFVMEDTTGAVVRRNREGGKLNATAMDMVQERINKTTRDTESVIFVQDERSRTDPDAEVELVLIPEKDLLDPESTARFEDGVNADEEGKDNGDGDGDAKGARKKHREEDGADGGDESD-GGRSSDFSSDQFSASIGSMGSDLEEDEDDPFAAMQKDVQDEKDAHSSAT--DTAGTNEAARG 4056
+TFMKYCRFGDRRNTGRMVVAKL ALCKDAGIIDKRFPVQRVEISFSRLKPRDLS+LPY SFLAALDDIGTQHPDLRRL DAAAAAAQEESVAVLVRA+PGATTAVSSLVEADRGSGVGKKSKRPYNRSARG ATSPTNADGKRSRAENSRTPTTENRAEKAAKLSGRPGAAGAKSPAGGGATAKVAGAKAAXXXX AETAEVECLGGFRPDDQ LLVLLQKFVFVNSQAGKEACSEMEAEGRGARRRALDRLEAAA+VVQACVARGCSGRALAREASGRR+LHRH+ RLNWAA+LLQTR MRAF ARTRAAK+A+KRYYRCLDGLTGAEYYFDP+TGKSSWTKPKILGKFDISTAVVVPAGEEIMVPMCHECAXXXXXXXXXXXXXXXXXXXXVDRIHRTGNASTHLRVPI+XXXXXXXXXXXXXXXXXGDNFCVSCFA++HRKGRIRRHTFEPLVGMCHDCGDRAQAFQCFGCD EG LLLCKRCLEARHHYLLPDQLA+HRIEAVG RSLK+KRLKEEQ SRARELWMKAESA GKRSRDKKMLAAAIKIQAVWRGYLARKRRR+LMDQHLLWKIQRHKDDQIRKK TYKVARYFGKARLLKSDTNQEIVLKQYPRWWQSTIMDIVRPTFGWHEGAKMVREQEFFAKKTKRKGRWKVHAARLRLGGELIRLR+E+RKQRKYERL DKAVGVYQHARAKGGVSA HKEELQQ SRKAKRAVQN +QEREKAEERVKAAENALEALIGPFRLRNNVRAAVT+GMLMPFPVSMQKGKANARLEKGQNMRE VLKWMPYGRRVRVEPTDPSSVY LPEAEAGACPRPPSHAFGPFYVVGVKESRQNDKKDKAAAAA SALAGNLASKEPGDTKERPATGLGSGAAATTPAES GEGGTAAGADGGEDS VDLKAQSSPVLILDRQWLLEEAPLCQAYAMPILP ILM+LRTGIRDSSVVQVAIKVAVVGTHQHRDRLERWQ TKFDDDSDMHARLERWAAGSE RSKRLMLRRRKLFDVEEGFQPEKRRVMEAVESVLALWTSLQEMTDFAKSAAATGLASTQGADGKGMIGGKLGREVVVQLFKKWVQSDDRTKVIIMHRSGK ANEPAVEVVQVVGYIK DLDTPTPVLREFIRR+CGGWLNEHAKGDHFVMEDTTG +VRRNREGGKLNATAMDMVQERINKTTRDTESVIFV+DERSRTDPDAEVELVLIPEKD LDPEST FEDGVNA EEG DNGDGD DAKGARKKHREEDGADGGDESD GGRSSDFSSDQFSASIGSMGSDLEEDEDDPFAAMQKD+QDEKDAH+SAT DTAGTNEAARG
Sbjct: 73 RTFMKYCRFGDRRNTGRMVVAKLTALCKDAGIIDKRFPVQRVEISFSRLKPRDLSHLPYPSFLAALDDIGTQHPDLRRLGDAAAAAAQEESVAVLVRAIPGATTAVSSLVEADRGSGVGKKSKRPYNRSARGEATSPTNADGKRSRAENSRTPTTENRAEKAAKLSGRPGAAGAKSPAGGGATAKVAGAKAAXXXXTAETAEVECLGGFRPDDQRLLVLLQKFVFVNSQAGKEACSEMEAEGRGARRRALDRLEAAAMVVQACVARGCSGRALAREASGRRELHRHDARLNWAASLLQTR--------------MRAFAARTRAAKLAMKRYYRCLDGLTGAEYYFDPKTGKSSWTKPKILGKFDISTAVVVPAGEEIMVPMCHECAXXXXXXXXXXXXXXXXXXXXVDRIHRTGNASTHLRVPIEXXXXXXXXXXXXXXXXXGDNFCVSCFAHIHRKGRIRRHTFEPLVGMCHDCGDRAQAFQCFGCDTEGCLLLCKRCLEARHHYLLPDQLAEHRIEAVGFRSLKLKRLKEEQSSRARELWMKAESAATGKRSRDKKMLAAAIKIQAVWRGYLARKRRRHLMDQHLLWKIQRHKDDQIRKKLTYKVARYFGKARLLKSDTNQEIVLKQYPRWWQSTIMDIVRPTFGWHEGAKMVREQEFFAKKTKRKGRWKVHAARLRLGGELIRLRMESRKQRKYERLRDKAVGVYQHARAKGGVSAAHKEELQQISRKAKRAVQNHQQEREKAEERVKAAENALEALIGPFRLRNNVRAAVTEGMLMPFPVSMQKGKANARLEKGQNMRE------------VLKWMPYGRRVRVEPTDPSSVYLLPEAEAGACPRPPSHAFGPFYVVGVKESRQNDKKDKAAAAA-SALAGNLASKEPGDTKERPATGLGSGAAATTPAESIGEGGTAAGADGGEDSVVDLKAQSSPVLILDRQWLLEEAPLCQAYAMPILPVIQKILMVLRTGIRDSSVVQVAIKVAVVGTHQHRDRLERWQ-TKFDDDSDMHARLERWAAGSEDRSKRLMLRRRKLFDVEEGFQPEKRRVMEAVESVLALWTSLQEMTDFAKSAAATGLASTQGADGKGMIGGKLGREVVVQLFKKWVQSDDRTKVIIMHRSGKAANEPAVEVVQVVGYIKVDLDTPTPVLREFIRRYCGGWLNEHAKGDHFVMEDTTGEIVRRNREGGKLNATAMDMVQERINKTTRDTESVIFVRDERSRTDPDAEVELVLIPEKDFLDPESTPTFEDGVNAHEEGNDNGDGDVDAKGARKKHREEDGADGGDESDAGGRSSDFSSDQFSASIGSMGSDLEEDEDDPFAAMQKDLQDEKDAHNSATNNDTAGTNEAARG 1402
BLAST of mRNA_Ecto-sp8_S_contig1148.1844.1 vs. uniprot
Match: A0A6H5KFP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP2_9PHAE) HSP 1 Score: 920 bits (2379), Expect = 0.000e+0 Identity = 536/691 (77.57%), Postives = 552/691 (79.88%), Query Frame = 1
Query: 2131 QHARAKGGVSADHKEELQQNSRKAKRAVQNQEQEREKAEERVKAAENALEALIGPFRLRNNVRAAVTKGMLMPFPVSMQKGKANARLEKGQNMREASDAAIM-----FMFCRVLKWMPYGRRVRVEPTDPSSVYFLPEAEAGACPRPPSHAFGPFYVVGVKESRQNDKKDKAAAAAASALAGNLASKEPGDTKERPATGLGSGAAATTPAESFGEGGTAAGADGGEDSAVDLKAQSSPVLILDRQWLLEEAPLCQAYAMPILPILMMLRTGIRDSSVVQVAIKVAVVGTHQHRDRLERWQQTKFDDDSDMHARLERWAAGSEARSKRLMLRRRKLFDVEEGFQPEKRRVMEAVESVLALWT----------------------------------------SLQEMTDFAKSAAATGLASTQGADGKGMIGGKLGREVVVQLFKKWVQSDDRTKVIIMHRSGKGANEPAVEVVQVVGYIKADLDTPTPVLREFIRRFCGGWLNEHAKGDHFVMEDTTGAVVRRNREGGKLNATAMDMVQERINKTTRDTESVIFVQDERSRTDPDAEVELVLIPEKDLLDPESTARFEDGVNADEEGKDNGDGDGDAKGARKKHREEDGADGGDE--SDGGRSSDFSSDQFSASIGSMGSDLEEDEDDPFAAMQKDVQDEKDAHSSAT--DTAGTNEAARG 4056
QHARAKGGVSADHK+ELQQNSRKAKRAVQNQEQEREKAEERVKAAENALEALIGPFRLRNNVRAAVTKGMLMPFPVSMQKGKANARLEKGQNMREASDAAI + C VLKWMPYGRRVRVEPTDPSSVYFLPEA ACPRPPSHAFGPFYVVGVKESRQ+DKK+KAAA AA ALA NLASKEPGDT+ERPATGLGSGAAATTPAES EGGTA GADGGEDS DLK+ + + L T D +QTKFDDDS+MHARLERWAAGSEA SKRLMLRRRKLFDVEEGFQPEKRRVMEAVESVLALWT SLQEMTDFAKSAAATGLASTQGADGKG+IGGKLGREVVVQLFKKWVQSDDRTKVIIMHRSGK ANEPAVEVVQVVGYIK DLDTPTPVLREFIRRFCGGWLNEHAKGDHFVMED TG VVRRNREGGK NATAMDMVQERINK TRDTESVIFVQDERSRTDPDAEVELVLIPEKD LDPEST FEDGVNADE KD+GDGD DA+GARKKHREEDGADGGDE +DG RSSD SSDQFSASIGSMGSDLEEDEDDPFAAMQKD+QDEKDAH+SAT DTAGTNEAARG
Sbjct: 35 QHARAKGGVSADHKDELQQNSRKAKRAVQNQEQEREKAEERVKAAENALEALIGPFRLRNNVRAAVTKGMLMPFPVSMQKGKANARLEKGQNMREASDAAICDSVLSCVVCSVLKWMPYGRRVRVEPTDPSSVYFLPEAGTRACPRPPSHAFGPFYVVGVKESRQSDKKEKAAATAALALAENLASKEPGDTRERPATGLGSGAAATTPAESIDEGGTAVGADGGEDSLGDLKSHAPSIFGF-------------------------LNTAFSDR------------------------EQTKFDDDSNMHARLERWAAGSEAWSKRLMLRRRKLFDVEEGFQPEKRRVMEAVESVLALWTRILQPACRGDLRVWRSRRNMKTDETVATFSLALFGGTLNPSLQEMTDFAKSAAATGLASTQGADGKGIIGGKLGREVVVQLFKKWVQSDDRTKVIIMHRSGKAANEPAVEVVQVVGYIKVDLDTPTPVLREFIRRFCGGWLNEHAKGDHFVMEDATGTVVRRNREGGKQNATAMDMVQERINKATRDTESVIFVQDERSRTDPDAEVELVLIPEKDFLDPESTPTFEDGVNADEGEKDHGDGDVDAQGARKKHREEDGADGGDERYADG-RSSDVSSDQFSASIGSMGSDLEEDEDDPFAAMQKDLQDEKDAHNSATKNDTAGTNEAARG 675
BLAST of mRNA_Ecto-sp8_S_contig1148.1844.1 vs. uniprot
Match: A0A6H5KU11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU11_9PHAE) HSP 1 Score: 683 bits (1763), Expect = 2.080e-231 Identity = 386/501 (77.05%), Postives = 402/501 (80.24%), Query Frame = 1
Query: 1 MQTFMKYCRFGDRRNTGRMVVAKLAALCKDAGIIDKRFPVQRVEISFSRLKPRDLSYLPYSSFLAALDDIGTQHPDLRRLADAAAAAAQEESVAVLVRAVPGATTAVSSLVEADRGSGVGKKSKRPYNRSARGGATSPTNADGKRSRAENSRTPTTENRAEKAAKLSGRPGAAGAKSPAGGGATAKVAGAKAAXXXXXAETAEVECLGGFRPDDQSLLVLLQKFVFVNSQAGKEACSEMEAEGRGARRRALDRLEAAAVVVQACVARGCSGRALAREASGRRDLHRHNTRLNWAATLLQTRRVKTHSKTRPGVAR----------------MRAFTARTRAAKVAVKRYYRCLDGLTGAEYYFDPRTGKSSWTKPKILGKFDISTAVVVPAGEEIMVPMCHECAXXXXXXXXXXXXXXXXXXXXVDRIHRTGNASTHLRVPIDXXXXXXXXXXXXXXXXXGDNFCVSCFAYLHRKGRIRRHTFEPLVGMCHDCGDRAQAFQ 1455
MQTFMKYCRFGDRRNTGRMV AKLAALCKDAGIIDKRFPVQRVEISFSRLKP+DLS+LPYSSFLAALDDIGTQHPDLRRLADAA AAAQEESVAVLVRA+PGATTAVSSLVEADRGSGVGKKSKRPYNRSA+GGATSPTNADGKRSRAENSRTPTTENRAEKAAKL RPGAAGA XXXX AET EV+ LGGFRPDDQ LLVLLQK+VFVNSQAGKEACSEMEAEGRGARRRALDRLEAAAVVVQAC+ARGCSGRALAREASGRR+L RHNTRLNWAA+LLQTR +KTHSKTRPGVAR MRAF ARTRAAK+AVKRYYRCLDGLTGAEYYFDP+TGKSSW KPKILGKFDISTAVVVPAGEEIMVPMCHECA +T +V + GDNFCVSCFAYLHRKGRIRRHTFEPLVG+CHDCGDRAQ Q
Sbjct: 14 MQTFMKYCRFGDRRNTGRMVAAKLAALCKDAGIIDKRFPVQRVEISFSRLKPKDLSHLPYSSFLAALDDIGTQHPDLRRLADAATAAAQEESVAVLVRAIPGATTAVSSLVEADRGSGVGKKSKRPYNRSAKGGATSPTNADGKRSRAENSRTPTTENRAEKAAKLGVRPGAAGAXXXXXXXXXXXXXXXXXXXXXXTAETFEVDYLGGFRPDDQRLLVLLQKYVFVNSQAGKEACSEMEAEGRGARRRALDRLEAAAVVVQACMARGCSGRALAREASGRRELDRHNTRLNWAASLLQTRWMKTHSKTRPGVARFTLRTLFVKIYCMQEQMRAFAARTRAAKMAVKRYYRCLDGLTGAEYYFDPKTGKSSWAKPKILGKFDISTAVVVPAGEEIMVPMCHECAE---------------------------EVATDFQVAVKHCQQC------------GDNFCVSCFAYLHRKGRIRRHTFEPLVGICHDCGDRAQVQQ 475
BLAST of mRNA_Ecto-sp8_S_contig1148.1844.1 vs. uniprot
Match: A0A7S3PQJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PQJ7_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 7.200e-7 Identity = 40/161 (24.84%), Postives = 61/161 (37.89%), Query Frame = 1
Query: 1033 YYFDPRTGKSSWTKPKILGKFDISTAVVVPAGEEIMVPMCHECAXXXXXXXXXXXXXXXXXXXXVDRIHRTGNASTHLRVPIDXXXXXXXXXXXXXXXXX-GDNFCVSCFAYLHRKGRIRRHTFEPLV-GMCHDCGDRAQAFQCFGCDAEGRLLLCKRCLE 1509
Y+F+P+TG++SW KP +L ++ T V +P +V C C+ D H G +TH+ V I D+FC +CF H G H+ + LV +C C RA + + C C+E
Sbjct: 6 YWFNPKTGRTSWEKPHVLQDAEVDTVVHIPPERHQLVKYCERCSEKLIKVFCDDCEEYTCRDCF-DSFHTKGKRATHISVSIKTCIHCQFQLATRSCEDCKSDSFCDTCFMKTHESGTWVNHSCKLLVKNICQICESRASTH------SVSESICCSFCVE 159
BLAST of mRNA_Ecto-sp8_S_contig1148.1844.1 vs. uniprot
Match: A0A7S3GX72_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GX72_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 7.390e-7 Identity = 29/73 (39.73%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 946 MRAFTARTRAAKVAVKRYYRCLDGLTGAEYYFDPRTGKSSWTKPKILGKFDISTAVVVPAGEEIMVPMCHECA 1164
+R F R + ++A Y + +DG T EY+ +PRT S WTKP +LG+FD A +P+ EE +C +CA
Sbjct: 125 IRGFLGRRQIKRMAQAMYTKFIDGATEREYWCNPRTNVSHWTKPALLGEFDCGMATRMPSEEERFTVVCGQCA 197
BLAST of mRNA_Ecto-sp8_S_contig1148.1844.1 vs. uniprot
Match: A0A482UT58_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UT58_9ARCH) HSP 1 Score: 65.5 bits (158), Expect = 7.640e-7 Identity = 59/167 (35.33%), Postives = 75/167 (44.91%), Query Frame = 1
Query: 949 RAFTARTRAAKVAVKRYYRCLDGLTGAEYYFDPRTGKSSWTKPKILGKFDISTAVVVPAGEEIMVPMCHECAXXXXXXXXXXXXXXXXXXXXVDRIHRTGNASTHLRVPIDXXXXXXXXXXXXXXXXXGDNFCVSCFAYLHRKGRIRRHTFEPLVGMCHDCGDRAQA 1449
R + R K++ Y + LDG + EY+F+PRT S WTKP++LG D AV +P +E C C IHRTG TH + +D XXXXXXXXXXXXXXXX +R H +E C DC +R A
Sbjct: 687 RGYLGRRFIRKISQHLYSKYLDGESEREYWFNPRTQTSYWTKPRLLGDLDCGPAVRMPTPDEAFTIFCTNCEKNHATCYCQQCNGPYCTPCYAS-IHRTGTRKTHQHLLVDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRYHAYERYAARC-DCCERRSA 851 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1148.1844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1148.1844.1 >prot_Ecto-sp8_S_contig1148.1844.1 ID=prot_Ecto-sp8_S_contig1148.1844.1|Name=mRNA_Ecto-sp8_S_contig1148.1844.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=1353bp MQTFMKYCRFGDRRNTGRMVVAKLAALCKDAGIIDKRFPVQRVEISFSRLback to top mRNA from alignment at Ecto-sp8_S_contig1148:37..14493+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1148.1844.1 ID=mRNA_Ecto-sp8_S_contig1148.1844.1|Name=mRNA_Ecto-sp8_S_contig1148.1844.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=14457bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1148:37..14493+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1148:37..14493+ >mRNA_Ecto-sp8_S_contig1148.1844.1 ID=mRNA_Ecto-sp8_S_contig1148.1844.1|Name=mRNA_Ecto-sp8_S_contig1148.1844.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=4059bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1148:37..14493+ (Ectocarpus species8 EcLAC_412)back to top |