mRNA_Ecto-sp8_S_contig11411.1781.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11411.1781.1 vs. uniprot
Match: D7FRX3_ECTSI (Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRX3_ECTSI) HSP 1 Score: 677 bits (1746), Expect = 1.290e-244 Identity = 339/345 (98.26%), Postives = 339/345 (98.26%), Query Frame = 1
Query: 1 MSSRLALLERFVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAKARSLGLWNLFMPKGHEGSANVPMQEYAQMSELMGRSSIAPEACNCSAPDTGNMEVFANYGSPEHKATWLTPLLEGKIRSAFLMTEPAVASSDATNIACDVHREGDMYVINGRKWWSSGAMDPRCKVAIVMCRHGGAEWDAKGSHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPLSSILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRDRVAFGKVLSEDSLVRHHVAQSRMEIDQARWLKSRLLVQDCAAKLEAFGLQGAIQEVSMI 1035
MSSRLALLERFVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAKARSLGLWNLFMPKGHEGSANVPMQEYAQMSELMGRSSIAPEACNCSAPDTGNMEVFANYGSPEHKATWLTPLLEGKIRSAFLMTEPAVASSDATNIACDVHREGDMYVINGRKWWSSGAMDPRCKVAIVMCRHGGAEWDAKGSHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPLSSILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRDRVAFGK LSEDSLVRHHVAQSRMEIDQ SRLLVQDCAAKLEAFGLQGAIQEVSMI
Sbjct: 1 MSSRLALLERFVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAKARSLGLWNLFMPKGHEGSANVPMQEYAQMSELMGRSSIAPEACNCSAPDTGNMEVFANYGSPEHKATWLTPLLEGKIRSAFLMTEPAVASSDATNIACDVHREGDMYVINGRKWWSSGAMDPRCKVAIVMCRHGGAEWDAKGSHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPLSSILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRDRVAFGKALSEDSLVRHHVAQSRMEIDQ-----SRLLVQDCAAKLEAFGLQGAIQEVSMI 340
BLAST of mRNA_Ecto-sp8_S_contig11411.1781.1 vs. uniprot
Match: A0A836C9V4_9STRA (Acyl-CoA dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9V4_9STRA) HSP 1 Score: 450 bits (1158), Expect = 2.770e-155 Identity = 229/344 (66.57%), Postives = 272/344 (79.07%), Query Frame = 1
Query: 10 RLALLERFVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAKARSLGLWNLFMPKGHEGSANVPMQEYAQMSELMGRSSIAPEACNCSAPDTGNMEVFANYGSPEHKATWLTPLLEGKIRSAFLMTEPAVASSDATNIACDVHREGDMYVINGRKWWSSGAMDPRCKVAIVMCRHGGAEWDAKGSHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPL-SSILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRDRVAFGKVLSEDSLVRHHVAQSRMEIDQARWLKSRLLVQDCAAKLE-AFGLQGAIQEVSMI 1035
RL LE FVEDECIPAE V EI+ARTG+RW EVPAV+ +LK +AR+LGLWNLFMP GH G+ V + +YA +SE+MGRS+IAPEACNCSAPDTGNMEV A YGS +A WL LLEG+IRSAFLMTEP ASSDATNIAC + R GD YV+ GRKWWS+GAMDPRC++ IVM R GAEWDA+ H RH+M++VP +PGVT+ RAL+VFGYDDAPHGHAEV LR V V +++LLGEGRGFEIAQGRLGPGRVHHCMRA+G+AERAL A V+RSR+R+AFG+ L + +VR +A SRME+DQAR L V DCA KLE + G +GA+ EV+MI
Sbjct: 12 RLRTLEAFVEDECIPAERV-----KEIKARTGSRWSEVPAVMEQLKLRARALGLWNLFMPPGHPGTQGVSVSQYAALSEVMGRSTIAPEACNCSAPDTGNMEVLAQYGSAAQQAAWLPDLLEGRIRSAFLMTEPETASSDATNIACRIRRFGDKYVVTGRKWWSTGAMDPRCRLFIVMGRMEGAEWDARPIHQRHTMLLVPARSPGVTLERALEVFGYDDAPHGHAEVTLRGVEVSADAALLLGEGRGFEIAQGRLGPGRVHHCMRALGLAERALTALVRRSRERIAFGRPLCDHDMVRRSIADSRMELDQARHL-----VLDCARKLERSGGAKGAMMEVAMI 345
BLAST of mRNA_Ecto-sp8_S_contig11411.1781.1 vs. uniprot
Match: A0A0K1PZJ7_9DELT (Acyl-CoA dehydrogenase n=1 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1PZJ7_9DELT) HSP 1 Score: 385 bits (989), Expect = 1.630e-129 Identity = 200/335 (59.70%), Postives = 243/335 (72.54%), Query Frame = 1
Query: 31 FVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAKARSLGLWNLFMPKGHEGSANVPMQEYAQMSELMGRSSIAPEACNCSAPDTGNMEVFANYGSPEHKATWLTPLLEGKIRSAFLMTEPAVASSDATNIACDVHREGDMYVINGRKWWSSGAMDPRCKVAIVMCRHGGAEWDAKGSHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPLSSILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRDRVAFGKVLSEDSLVRHHVAQSRMEIDQARWLKSRLLVQDCAAKLEAFGLQGAIQEVSMI 1035
FV + IPAEP F + +AE +G RW +P V+ LKAKAR GLWNLF+P H G A + EYA + E+MGRS IAPE NC+APDTGNMEV YG+ K WL PLL G IRS F MTEP VASSDATNIAC + +GD YVI+GRKWW+SGAMDPRCK+AIVM G + DA H + SMV+VP+D PGV +VR L VFGYDDAPHGHAEV NVRVP S+ILLGEGRGFEIAQGRLGPGR+HHCMRA+G+AERAL A +R ++RVAFG+ L+E +RH +A+SR+EID+AR LL + A ++ G + A +E++MI
Sbjct: 22 FVNEHVIPAEPAFERHLAE----SGNRWS-IPPVMEELKAKARREGLWNLFLPD-HGGGAGLTNLEYAPLCEIMGRSPIAPEVFNCNAPDTGNMEVLVRYGTDAQKKAWLEPLLAGTIRSCFAMTEPEVASSDATNIACSIRGDGDSYVIHGRKWWTSGAMDPRCKIAIVM---GKTDPDAP-RHLQQSMVLVPLDTPGVRVVRPLTVFGYDDAPHGHAEVAFENVRVPKSNILLGEGRGFEIAQGRLGPGRIHHCMRAIGLAERALEAMCKRVQERVAFGRPLAEQGALRHEIARSRIEIDEAR-----LLTLNAAHTMDVHGNKAAKKEIAMI 341
BLAST of mRNA_Ecto-sp8_S_contig11411.1781.1 vs. uniprot
Match: A0A1Y1Y4D0_9FUNG (Acyl-CoA dehydrogenase domain protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y4D0_9FUNG) HSP 1 Score: 377 bits (968), Expect = 2.650e-126 Identity = 189/339 (55.75%), Postives = 238/339 (70.21%), Query Frame = 1
Query: 19 LLERFVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAKARSLGLWNLFMPKGHEGSANVPMQEYAQMSELMGRS-SIAPEACNCSAPDTGNMEVFANYGSPEHKATWLTPLLEGKIRSAFLMTEPAVASSDATNIACDVHREGDMYVINGRKWWSSGAMDPRCKVAIVMCRHGGAEWDAKGSHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPLSSILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRDRVAFGKVLSEDSLVRHHVAQSRMEIDQARWLKSRLLVQDCAAKLEAFGLQGAIQEVSM 1032
+L FVE+ECIPAE ++ +++ + RW+ +P V+ LK KAR LGLWNLF+PKGHE + EYA + E+MGRS IAPEACNC APDTGNMEVF YG+ E K WL PLLEGKIRSAF MTEPAVASSDATNI + R+GD Y+INGRKWW SGA DPRCKV +VM G + H + ++++VP D PGVT+VR L VFGYD APHGH EV NV+VP ++LLGEGRGFEI QGRLGPGR+HHCMRA+G+AERAL + R+ +R FGK +SE + +A SR+EI+Q R LLV A ++ G + A++E+++
Sbjct: 16 VLTNFVENECIPAEQIYEEQIG----KGDDRWKVIPPVMEELKEKARKLGLWNLFIPKGHEEGPGLTNLEYAYLCEIMGRSVRIAPEACNCGAPDTGNMEVFLKYGNKEQKEKWLKPLLEGKIRSAFAMTEPAVASSDATNIETSIKRQGDDYIINGRKWWISGAGDPRCKVFLVM----GKTDTTQPKHKQQTIIIVPADTPGVTVVRPLTVFGYDHAPHGHCEVSFENVKVPKENLLLGEGRGFEIVQGRLGPGRIHHCMRAIGVAERALDTLITRASERRTFGKYISEHQIAMQDIAVSRIEIEQGR-----LLVFRAADMIDKIGAKKALKEIAL 341
BLAST of mRNA_Ecto-sp8_S_contig11411.1781.1 vs. uniprot
Match: A0A0L0HJ70_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HJ70_SPIPD) HSP 1 Score: 376 bits (965), Expect = 1.320e-125 Identity = 194/340 (57.06%), Postives = 242/340 (71.18%), Query Frame = 1
Query: 19 LLERFVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAKARSLGLWNLFMPKGHEGSANVPMQEYAQMSELMGRSSIAPEACNCSAPDTGNMEVFANYGSPEHKATWLTPLLEGKIRSAFLMTEPAVASSDATNIACDVHREGDMYVINGRKWWSSGAMDPRCKVAIVMCRHGGAEWDAKGSHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPLSSILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRD--RVAFGKVLSEDSLVRHHVAQSRMEIDQARWLKSRLLVQDCAAKLEAFGLQGAIQEVSM 1032
+LE FVE ECIPAE V ++ +I + RW VP+V+ +LK +A+SLGLWNLF+P + S + EYA + E+MGRS IA EACNCSAPDTGNMEVFA YG+PE K WL PL+EGKIRSAF MTEPAVASSDATNI ++ REG+ YVINGRKWW SGA DPRC V +V+ G + H + S+++VP DA GV +VR + ++GYDDAPHGH E+ NVRVP +++LGEGRGFE+ QGRLGPGR+HHCMRA+G AERAL H+ R+ D R FGKVL++ VAQSRMEIDQAR LLV AA ++ G + A+ E++M
Sbjct: 17 VLEDFVEFECIPAEKVHHHQLGKI--GSADRWTVVPSVIEKLKTRAKSLGLWNLFLPSYYPESPGLTNLEYATLCEVMGRSHIAAEACNCSAPDTGNMEVFARYGTPEQKKKWLVPLMEGKIRSAFAMTEPAVASSDATNIQTEITREGNEYVINGRKWWISGAGDPRCAVYVVL---GKNDPKNPNKHKQQSVIIVPADAKGVKIVRPMTIYGYDDAPHGHMEMIFDNVRVPAENMILGEGRGFEVIQGRLGPGRIHHCMRAIGAAERALEYHLLRATDQTRTTFGKVLAQHGKTSFDVAQSRMEIDQAR-----LLVLRAAATIDEKGPKAAMNEIAM 346
BLAST of mRNA_Ecto-sp8_S_contig11411.1781.1 vs. uniprot
Match: W7UAJ9_9STRA (Acyl-dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAJ9_9STRA) HSP 1 Score: 375 bits (964), Expect = 2.120e-125 Identity = 191/341 (56.01%), Postives = 247/341 (72.43%), Query Frame = 1
Query: 16 ALLERFVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAKARSLGLWNLFMPKGHEGSANVPMQEYAQMSELMGRSSIAPEACNCSAPDTGNMEVFANYGSPEHKATWLTPLLEGKIRSAFLMTEPAVASSDATNIACDVHREGDMYVINGRKWWSSGAMDPRCKVAIVMCRHGGAEWDAKGSHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPLSSILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRDRVAFGKVLSEDSLVRHHVAQSRMEIDQARWLKSRLLVQDCAAKLEAF-GLQGAIQEVSMI 1035
A L FV++EC+PAE V+ ++ AE+ +RW +P ++ LK KAR LGLWNLFM + + + M EYA +SE+MGRS +APEACNC+APDTGNMEV A YG+ +A WL PL+EG IRS FLMTEP VASSDATNIA REGD YV+NGRKWWSSGAMDPRC+VA+V+ + A H +HS+++VP+ PGV ++RAL VFG+DDAPHGHAEVEL VRVP+S+++LGEG GF+IAQGRLGPGR+HHCMRA+G++ER LA R+ R AFGK ++ V+ +AQ R+ +DQAR LLV A +++ G +GA QE++MI
Sbjct: 14 AKLTAFVDEECLPAEVVYERQHAEL----SSRWM-IPEIIETLKGKARKLGLWNLFMMERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAAPRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSNLILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQAR-----LLVLHAAWRMDTNKGAKGAQQEIAMI 344
BLAST of mRNA_Ecto-sp8_S_contig11411.1781.1 vs. uniprot
Match: A0A7Y4ZQT9_9DELT (Acyl-CoA dehydrogenase n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y4ZQT9_9DELT) HSP 1 Score: 372 bits (955), Expect = 1.960e-124 Identity = 199/349 (57.02%), Postives = 245/349 (70.20%), Query Frame = 1
Query: 4 SSRLALLER----FVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAKARSLGLWNLFMPKGHEGSANVPMQEYAQMSELMGRSSIAPEACNCSAPDTGNMEVFANYGSPEHKATWLTPLLEGKIRSAFLMTEPAVASSDATNIACDVHREGDMYVINGRKWWSSGAMDPRCKVAIVMCRHGGAEWDAKG-SHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPLSSILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRDRVAFGKVLSEDSLVRHHVAQSRMEIDQARWLKSRLLVQDCAAKLEAFGLQGAIQEVSMI 1035
S R A LE FV PAE VF Q++A TRW +P V+ LK KAR+ GLWNLF+P+ HE A + EYA + E+MG S IAPEA NCSAPDTGNMEV A YG+ + WLTPLL G+IRS F MTEP VASSDATNI+C + REGD YVI+GRKWW+SGA DPRCK+AIVM + D G + SMV+VP+D GV +VR+L+VFGYDDAPHGHAEV R VRVP+ ++LLGEGRGFEIAQGRLGPGR+HHCMR +G+AERAL +R+ +R+AFGK L+E +RH +A+SR+EIDQAR LL D A ++ G + A + ++MI
Sbjct: 6 SGRAAALEEEVRAFVATHVYPAEAVFHQQLA----AASTRWS-IPPVMEELKLKARAAGLWNLFLPE-HEKGAGLTNLEYAALCEIMGASPIAPEAFNCSAPDTGNMEVLARYGTKAQQDRWLTPLLAGEIRSCFAMTEPEVASSDATNISCTIRREGDEYVIDGRKWWTSGASDPRCKIAIVM-----GKTDPTGPKYLAQSMVLVPMDTKGVEVVRSLQVFGYDDAPHGHAEVVFRAVRVPVENVLLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALGLMCRRAEERIAFGKPLAEQGALRHDIARSRIEIDQAR-----LLTLDAAHAMDTRGNKEAKKRIAMI 338
BLAST of mRNA_Ecto-sp8_S_contig11411.1781.1 vs. uniprot
Match: A0A0P7XTY8_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Saliniramus fredricksonii TaxID=1653334 RepID=A0A0P7XTY8_9HYPH) HSP 1 Score: 370 bits (951), Expect = 9.300e-124 Identity = 190/335 (56.72%), Postives = 241/335 (71.94%), Query Frame = 1
Query: 31 FVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAKARSLGLWNLFMPKGHEGSANVPMQEYAQMSELMGRSSIAPEACNCSAPDTGNMEVFANYGSPEHKATWLTPLLEGKIRSAFLMTEPAVASSDATNIACDVHREGDMYVINGRKWWSSGAMDPRCKVAIVMCRHGGAEWDAKGSHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPLSSILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRDRVAFGKVLSEDSLVRHHVAQSRMEIDQARWLKSRLLVQDCAAKLEAFGLQGAIQEVSMI 1035
F+E+ PAE VF +++ +RW P ++ LKAKA++ GLWNLF+P+ E ++ EYA + E+MGRS I PE NCSAPDTGNME A YG+PE K WL PLLEG+IRS F MTEP VASSDATNI + R+GD Y+INGRKWW+SGAMDPRC++AI+M G + DA+ H + SM++VP+D PGVT+ RAL VFGYDDAPHGHAEV NVRVP S+ILLGEGRGFEIAQGRLGPGR+HHCMRA+G+AERAL ++R+ R FG+ +++ + RH +A+SRMEIDQAR LL A ++A G + A E++MI
Sbjct: 21 FMEEHIYPAESVFEEQLD----AASSRWS-APPIMEELKAKAKAKGLWNLFLPR-REYPDSLTNYEYAHICEVMGRSPIGPEPFNCSAPDTGNMETIARYGTPEQKKAWLEPLLEGEIRSCFAMTEPDVASSDATNIRTLISRDGDDYIINGRKWWTSGAMDPRCRIAILM---GKTDPDAE-KHKQQSMILVPMDTPGVTVERALTVFGYDDAPHGHAEVTFDNVRVPASNILLGEGRGFEIAQGRLGPGRIHHCMRAIGVAERALETMIKRALSRETFGRAIADHGVTRHWIAESRMEIDQAR-----LLTLHAAKMMDAVGNKAARAEIAMI 340
BLAST of mRNA_Ecto-sp8_S_contig11411.1781.1 vs. uniprot
Match: I3TI97_TISMK (Putative acyl-CoA dehydrogenase n=6 Tax=Tistrella TaxID=171436 RepID=I3TI97_TISMK) HSP 1 Score: 370 bits (949), Expect = 1.440e-123 Identity = 192/335 (57.31%), Postives = 236/335 (70.45%), Query Frame = 1
Query: 31 FVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAKARSLGLWNLFMPKGHEGSANVPMQEYAQMSELMGRSSIAPEACNCSAPDTGNMEVFANYGSPEHKATWLTPLLEGKIRSAFLMTEPAVASSDATNIACDVHREGDMYVINGRKWWSSGAMDPRCKVAIVMCRHGGAEWDAKGSHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPLSSILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRDRVAFGKVLSEDSLVRHHVAQSRMEIDQARWLKSRLLVQDCAAKLEAFGLQGAIQEVSMI 1035
F++ PAE VF ++ + RW P ++ LKAKAR+ GLWNLF+P G A + +YA + E+MGRS IAPE NC+APDTGNMEV YG+ EHK WL PLL+GKIRSAF MTEP VASSDATNI + R+GD YVINGRKWW+SGA DPRCK+ I M G +D H + SMV+VP+D PGVT++R LKVFGYDDAPHGHAEV NVRVP+ +ILLGEGRGFEIAQGRLGPGR+HHCMR +G+AERAL + +R++ R AFGK L+E + RH++AQSRMEIDQAR LL A ++ G + A E++ I
Sbjct: 19 FMDAYVYPAEAVFEEQ----HRASPDRWV-TPPIIEELKAKARAAGLWNLFLPHSERG-AGLNNLDYAPLCEVMGRSEIAPEVFNCNAPDTGNMEVLERYGTEEHKRQWLEPLLDGKIRSAFAMTEPMVASSDATNIESRIERDGDDYVINGRKWWTSGAPDPRCKILIFM---GKTRFDGP-RHSQQSMVLVPMDTPGVTVLRPLKVFGYDDAPHGHAEVLFENVRVPVENILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALESMCKRAQQRTAFGKTLAEHGMTRHYIAQSRMEIDQAR-----LLTLKAAWMMDTVGNKNAKSEIAAI 338
BLAST of mRNA_Ecto-sp8_S_contig11411.1781.1 vs. uniprot
Match: UPI001BBABC21 (Acyl-CoA dehydrogenase family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI001BBABC21) HSP 1 Score: 370 bits (949), Expect = 1.690e-123 Identity = 197/351 (56.13%), Postives = 250/351 (71.23%), Query Frame = 1
Query: 1 MSSRLALLER----FVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAKARSLGLWNLFMPKGH--EGSANVPMQEYAQMSELMGRSSIAPEACNCSAPDTGNMEVFANYGSPEHKATWLTPLLEGKIRSAFLMTEPAVASSDATNIACDVHREGDMYVINGRKWWSSGAMDPRCKVAIVMCRHGGAEWDAKGSHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPLSSILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRDRVAFGKVLSEDSLVRHHVAQSRMEIDQARWLKSRLLVQDCAAKLEAFGLQGAIQEVSMI 1035
+S R A L++ F+++ AEPV+ ++++E +G RW+ P V+ LK KAR+ GLWNLF+PK H +G N EY Q+ E+MGRS I PE+ NCSAPDTGNMEV YG+ EH+ WL PL++GKIRS F MTEPAVASSDATNI ++ ++GD YVINGRKWW+SGA D RCK++I M G + +A H R SM++VP++ PGV ++R L VFGYDDAPHGHAEV NVRVP S+ILLGEGRGFEIAQGRLGPGR+HHCMRA+G AERAL QRS R AFGK L+E S+ +H +A+SRM+IDQAR LL A K++ G + A E++MI
Sbjct: 5 LSPRAAELKKKVTAFMDEHVYAAEPVYARQLSE----SGDRWKS-PPVMEELKKKARAQGLWNLFLPKAHHEDGLTNY---EYGQICEIMGRSPIGPESFNCSAPDTGNMEVILKYGTKEHQKQWLEPLMDGKIRSCFAMTEPAVASSDATNIRAEIKKDGDSYVINGRKWWTSGANDHRCKISIFM---GQTDPNAD-PHKRQSMILVPMETPGVKVLRHLNVFGYDDAPHGHAEVVFENVRVPASNILLGEGRGFEIAQGRLGPGRIHHCMRAIGSAERALELMCQRSVSRTAFGKKLAEHSVNKHWIAESRMDIDQAR-----LLTLYAAHKMDELGNKEARAEIAMI 338 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11411.1781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11411.1781.1 >prot_Ecto-sp8_S_contig11411.1781.1 ID=prot_Ecto-sp8_S_contig11411.1781.1|Name=mRNA_Ecto-sp8_S_contig11411.1781.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=345bp MSSRLALLERFVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAback to top mRNA from alignment at Ecto-sp8_S_contig11411:2298..6484+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11411.1781.1 ID=mRNA_Ecto-sp8_S_contig11411.1781.1|Name=mRNA_Ecto-sp8_S_contig11411.1781.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4187bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11411:2298..6484+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11411:2298..6484+ >mRNA_Ecto-sp8_S_contig11411.1781.1 ID=mRNA_Ecto-sp8_S_contig11411.1781.1|Name=mRNA_Ecto-sp8_S_contig11411.1781.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1035bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11411:2298..6484+ (Ectocarpus species8 EcLAC_412)back to top |