mRNA_Ecto-sp8_S_contig11376.1742.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11376.1742.1 vs. uniprot
Match: D7FUF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF1_ECTSI) HSP 1 Score: 1516 bits (3925), Expect = 0.000e+0 Identity = 1043/1336 (78.07%), Postives = 1064/1336 (79.64%), Query Frame = 1
Query: 1 GMGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRIDDDATLRNRFHRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHPANCDVAMRMAEASAEEAQAELGVNTDRSASAIEHAPPESMRERHAAWVVKTALERGILLRRRWASDPGSAGSSGGGRVCGPSRPPTAESNKAAAEAAARHKLPADMWKKFLFMRPSEHYYDGHVGSAASQKAASLP-AAAAAARAAPGGTRVAIVGARRLSAGARAAEKTTGRRTGTEKPRYWREPIRSGASAVPSSAVVADGXXXXXXXXXXXXXXXKRIKGTVRASSSSFRSSVVAPGTDGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATVTVVKKRGRGRPRKVRPVQQAQPAKEEEAAQPPVGSTSDDPSVEEVRAREETDKVERPVIGAASSEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEXXXXXXXXXTSRQVAPAAISKGFSPKARVRRKGDGLKQGDMPKTRVAKATPSKDVSAPPQAAAPRSREEKEIPRELVLEGALPRAKVCQRED--DPKRADDPEHRVAETPGSMDVSAPPKVTAPRPEEEETPREGVPEPASKAASPTQGARVRRKGDNPRRRVDGVFVSRSLSATPGAAAPQSGEETPREVAPVAASSVTSPEARVRRKGDDPRRRVAGAAVTKNVTSVPPEPSCKPHLVRTPKSSDTGAPSSSSRLPTPMSPLLPAAVSSA-MPGPSFDPRVSTAGAAASPVAPLYPTLPLGHDDGVYLDVPMAMTAFPELPFAGDMAPTLHQAFYGTMGSIGFTADSTQAHGPLGSYGGTPPPPHGFLGPEPPPAEAVGSCDDRFVALAGMGGSGGGARFDGGGDGGWCRXXXXXXGNDEGGDDRVGYDGSVAGGGSXXXXXXXXXXXXXXXXXGFGAGGRSGRLGEDALDVGDGGDGFGKAVGVLANVRTMGTGTGRGTVGGHDSDKGIGGGESPPLTPIRRRRNNAGVRGGHRTSGRASMSGSGARGFQVGDDGGSGASLLSSAPSPPVRGERKSTGENKSSERXXXXXXGRPEVAAGGVGTVAGGSASVCPDGAGTSHGRSGGXXXXXXXXXXXXGRRVSQQAGGEXXXXXXXXXCVNKRSESSSNHRGGIGLEE-DQGHAGGKPSQPLPQPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGWVPNIMIPKKAAREAPVLCPADGGGGASFS 3993
GMGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRIDDDATLRNR HRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHPANC+VAMRMAEASAEEAQAELGVNTDRSASAIEHAPPESMRERHAAWV+KTALERGILLRRRWASDPGSAGSSGGGRVCGPSRPPTAESNKAAAEAAARHKLPADMWKKFLFMRPSEHYYDGHVGSAASQK A +P AAAAAARAAPGGTRVAI RLS ARAAEKTTGRRTGTEKPRYWREPIRSGASAV SSAVVADG XXXXXXXXXX KRIK TVRASSSSFRS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TVTVVKKRGRGRPRKV+PVQ+AQPAKEEEAAQ VGST DDP VEEVRAREETDKVERP+IG ++SEDK XXXXXXXX XXXX RQVAPAAISKGFSPKARVRRKGDG KQGD PKTRVAKATPSK VSA PQ AAPRSREEKE PRELVLEGALPRAKVCQ+ED DPKRADD EHRVAETPGSMDVSAPPKVTAPRPEEEETPRE VPEPASKAASPTQGARVRRKGDNPRRRVDGVFVS+SLSATPGAAA QSGEETPREVAPVAASSVTSPEARVRRKGD+PRRRVA AA +KNVTSVPPEPSCKPHLVRTPKSSDTGA MPGPSFDPRVSTAGAA S VAPLYPTLPLGHDD VYLDVPMAMTAFPELPFAGDMAPT H+AFYGTMGSIGFTADS QAHGPLGSYGGT PPPHGFLGPEPPPA+AVGSC DR VALAGM GSGGGARFDG XXXXXX XXXXXXXXXXXXXXXXX R+ G DA DVGD GDGFGKAVGV ANVRTMGTGTGRGTVGGHDSD+ IGGGESPPLTPIRRRR+NAGVRGGHRTSGRASM GSGAR QVGDDGGSGAS+LS+APSPPVRGERK TGENK ER GRPEVAAGGVGTVAGGSASVCPDGAGTSHGRSG XXXXXXXXXX GG CV+KRSESSSNHRGGIGLEE DQGHAGGKPSQPLPQP E XXXXXXXXXXXXXXXXXXXXX CGWVPNIMIPKK REAPVL PADGGGG+SFS
Sbjct: 18 GMGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRIDDDATLRNRLHRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHPANCEVAMRMAEASAEEAQAELGVNTDRSASAIEHAPPESMRERHAAWVIKTALERGILLRRRWASDPGSAGSSGGGRVCGPSRPPTAESNKAAAEAAARHKLPADMWKKFLFMRPSEHYYDGHVGSAASQKVAPIPTAAAAAARAAPGGTRVAIXXXXRLSXXARAAEKTTGRRTGTEKPRYWREPIRSGASAVRSSAVVADGGSXXXXXXXXXXAAAKRIKRTVRASSSSFRSXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVTVVKKRGRGRPRKVKPVQKAQPAKEEEAAQLRVGSTLDDPLVEEVRAREETDKVERPLIGGSASEDKPAPPDAAPTRPASEAAASIEDTAASGNLRGQASASGDTSAPPRQVEEAASPKVTTAVGKAGKATCQVVGASPPNXXXXXXXXXXXXXXX-------RQVAPAAISKGFSPKARVRRKGDGSKQGDKPKTRVAKATPSKHVSALPQVAAPRSREEKETPRELVLEGALPRAKVCQKEDEDDPKRADDQEHRVAETPGSMDVSAPPKVTAPRPEEEETPREVVPEPASKAASPTQGARVRRKGDNPRRRVDGVFVSKSLSATPGAAASQSGEETPREVAPVAASSVTSPEARVRRKGDNPRRRVAEAAASKNVTSVPPEPSCKPHLVRTPKSSDTGAXXXXXXXXXXXXXXXXXXXXXXXMPGPSFDPRVSTAGAAVSAVAPLYPTLPLGHDDRVYLDVPMAMTAFPELPFAGDMAPTPHRAFYGTMGSIGFTADSAQAHGPLGSYGGTSPPPHGFLGPEPPPADAVGSCHDRSVALAGMSGSGGGARFDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTXXXGGDANDVGDVGDGFGKAVGVRANVRTMGTGTGRGTVGGHDSDEAIGGGESPPLTPIRRRRSNAGVRGGHRTSGRASMPGSGARDSQVGDDGGSGASILSNAPSPPVRGERKRTGENKRPERKSSDGGGRPEVAAGGVGTVAGGSASVCPDGAGTSHGRSG---XXXXXXXXXXXXXXXXXXGGSE--------CVDKRSESSSNHRGGIGLEEEDQGHAGGKPSQPLPQPHEERXXXXXXXXXXXXXXXXXXXXXMGDDPTGGGW------------CGWVPNIMIPKKTGREAPVLGPADGGGGSSFS 1314
BLAST of mRNA_Ecto-sp8_S_contig11376.1742.1 vs. uniprot
Match: A0A6H5KVS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVS1_9PHAE) HSP 1 Score: 1372 bits (3550), Expect = 0.000e+0 Identity = 992/1505 (65.91%), Postives = 1022/1505 (67.91%), Query Frame = 1
Query: 4 MGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRIDDDATLRNRFHRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHPANCDVAMRMAEASAEEAQAELGVNTDRSASAIEHAPPESMRERHAAWVVKTALERGILLRRRWASDPGS--AGSSGGGRVCGPSRPPTAESNKAAAEAAARHKLPADMWKKFLFMRPSEHYYDGHVGSAASQKAASLPAAAAAARAAPGGTRVAIVGARRLSAGARAAEK-TTGRRTGTEKPRYWREPIRSGASAVPSSAVVADGXXXXXXXXXXXXXXXKRIKGTVRASSSSFRSSVVAPGTDGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATVTVVKKRGRGRPRKVRPVQQAQPAKEEEAAQPPVGSTSDDPSVEEVRAREETDKVERPVIGAASSEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEXXXXXXXXXTSRQVAPAAISKGFSPKARVRRKGDGLKQGDMPKTRVAKATPSKDVSAPPQAAAPRSREEKEIPRELVLEGALPRAKVCQREDDPKRADDPEHRVAETPGSMDVSAPPKVTAPRPEEEETPREGVPEPASKAASPTQGARVRRKGDNPRRRVDGVFVSRSLSATPGAAAPQSGEETPREVAPVAASSVTSPEARVRRKGDDPRRRVAGAAVTKNVTSVPPEPSCKPHLVRTPKSSDTGAPSSSSRLPTPMSPLLPAAVSSAMPGPSFDPRVSTAGAAASPVAPLY-------------------------------------------PTLPLGHDDGVYLDVPMAMTAFPELPFAGDMAPTLHQAFYGTMGSIGFTADSTQAHGPLGSYGGTPPPPHGFLGPEPPP-----AEAVGSCDDRFVALAGMGGSGGGARFDGGGDGGWCRXXXXXXGNDEGGDDRVGYDGSVAGGGSXXXXXXXXXXXXXXXXXGFGAGGRSGRLGEDALDVGDGGDGFGKAVGVLANVRTMGTGTGRGTVGGHDSDKGIGGGESPPLTPIRRRRNNAGVR-----------------------------------GGHRTS-------------------GRASMS---GSGARGFQVGDDGGSGA------------------------------------------------------------------SLLSSAPSPPVRGERKSTGENKSSERXXXXXXG-RPEVAAGGVGTVAGGSASVCPDGAGTSHGRSGGXXXXXXXXXXXXGRRVSQQAGGEXXXXXXXXXCVNKRSESSSNHRGGIGLEEDQGHAGGKPSQPLPQPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGWVPNIMIPKKAAREAPVLCPADGGGGASFS 3993
MGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRIDDDATLRNRFHRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHPANC+VAMRMAEAS EEAQAELGVNTDRSASAIEHAPPESMRERHAAWV+KTALERGILLRRRWASDP S GSSGGGR CGPSRPPTAESNKAAAE AARHKLPADMWKKFLFMRPSEHYYDGHVGSA SQKAA +PAAAAAAR PGGTRVAIVGARR+SAGARAAEK TT RRTGTEKPRYWREPIRSGASAVPS AVVADG KR GTVRASSSSFRSSVVAPGTD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX XXXXXXXXXX PRKV+PVQ+AQ AKEEEAAQP +GSTSDDPSV+EVRAREETDKVERPVIG ++SEDK LEEXXXXXXXX TSRQVAP AISKGFS KARVRRKG G KQGD PK+RVAKATPSKDVSAPPQ AA RELVLEG LPRAKVCQ+EDD KRADDPEHRVAETP SMDVSAPPK TAPRPEEE TP E VPEPASKAASPT+GARVRRKGDNPRRRVDGVFVS+SLSATPGAAAPQSGEETPREVAPVAASSVTSPEARVRRKGD+PRR VAGAA +KNVTSVPPEPSCKPHLVRTPKSSDTGAPSSSSRLP PMSPLLP+AVSSAMPGPSFDPRVS AAA VAPL PTLP+GHDDGVYLDVPMAMTAF +LPFAGDMAP+ HQAFYGTMGS+GFTADS QAHGPL SYGG+ PPPHGFLGP PPP A+AVGSCDDRFVALAGMGGSGGGARFDGGGDGGWC XXXXXX DRVGY XXXXXXXXXXXXXXXX GV ANVRTMG GTGR TVGGHDSD+GI GE PL PIRRRRNN GVR GG TS G AS S G G+R G G+GA SLLSSAPSP VRGERK TGE K ER G RPEVA GGVGTVAGGSAS CPDGAG+SHGRSGG GRRV +QA XXXXXXXX C NKRSESSSNHRGGIGLEEDQGH GKPSQPLPQP XXXXXXXXXXXXXXXXXXXX CGWVPN +I KK REAPVLCPA+GGGG SFS
Sbjct: 1 MGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRIDDDATLRNRFHRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHPANCEVAMRMAEASVEEAQAELGVNTDRSASAIEHAPPESMRERHAAWVIKTALERGILLRRRWASDPDSRSGGSSGGGRECGPSRPPTAESNKAAAETAARHKLPADMWKKFLFMRPSEHYYDGHVGSATSQKAAFVPAAAAAARXXPGGTRVAIVGARRMSAGARAAEKKTTARRTGTEKPRYWREPIRSGASAVPSLAVVADGGSGSGGSEGAAA---KRANGTVRASSSSFRSSVVAPGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGXXXGSXXXXXXXXXXXXXXXXX-------PRKVKPVQKAQSAKEEEAAQPRLGSTSDDPSVDEVRAREETDKVERPVIGTSASEDKSAPPDAAPMRPASEAAASMEDTAGGKLRGQASASDDTSAVGKAGMATCQVVGASPSNGGVSAPR------------------LEEXXXXXXXX-TSRQVAPGAISKGFSAKARVRRKGHGSKQGDNPKSRVAKATPSKDVSAPPQVAAXXXXXXXXXXRELVLEGPLPRAKVCQKEDDQKRADDPEHRVAETPVSMDVSAPPKATAPRPEEEATPLEVVPEPASKAASPTRGARVRRKGDNPRRRVDGVFVSKSLSATPGAAAPQSGEETPREVAPVAASSVTSPEARVRRKGDNPRRWVAGAAASKNVTSVPPEPSCKPHLVRTPKSSDTGAPSSSSRLPAPMSPLLPSAVSSAMPGPSFDPRVSATRAAAPAVAPLVSPQMAAPSPISFGQVMPHARREMSPSLSLLGLPPPDDASPPQCPTLPVGHDDGVYLDVPMAMTAFHKLPFAGDMAPSPHQAFYGTMGSVGFTADSPQAHGPLESYGGSSPPPHGFLGPGPPPLGGRSADAVGSCDDRFVALAGMGGSGGGARFDGGGDGGWCXXXXXXXXXXXXXXDRVGYGAXXX---XFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRANVRTMGAGTGRSTVGGHDSDEGIERGELSPLRPIRRRRNNTGVRSAGGSTGGGTHGQPASVVAGADAGLETAATTGLREGGVPTSSGPPWTPSSATEGSGRCEEGGASESTCPGIGSR--NEGGPSGAGAVAGEGGQRDRSSIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLSSAPSPSVRGERKRTGEKKRPERKSSGGDGGRPEVAVGGVGTVAGGSASACPDGAGSSHGRSGGANQCADDAEDSTGRRVRRQAXXXXXXXXXXXECANKRSESSSNHRGGIGLEEDQGHGDGKPSQPLPQPQXXXXXXXXXXXXXXXXXXXXXARATSSTGVDPTGGGW---------CGWVPNTVILKKTTREAPVLCPANGGGGGSFS 1462
BLAST of mRNA_Ecto-sp8_S_contig11376.1742.1 vs. uniprot
Match: L1K4C4_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K4C4_GUITC) HSP 1 Score: 111 bits (278), Expect = 4.820e-21 Identity = 63/154 (40.91%), Postives = 94/154 (61.04%), Query Frame = 1
Query: 1 GMGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRID-------DDATLRNRFHRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHPANCDVA----MRMAEASAEEAQAELGVNTDRSASAIEHAP 429
GMGS AIGGLK G+K VTA E+ D + AL +A FK++AKPGGSS++ ND +D + +L++ + + VR+ TF I G+AY++P+G HEF+N P LS+AWNI+P + + + + + + + DR SAI+HAP
Sbjct: 278 GMGSLVAIGGLKCGKKLVTAVEACDASLALKIAGFKSYAKPGGSSFLTNDPVDRSFSGEEESCSLKDLWTMSHVRWGTFEISAGDAYVIPAGMPHEFLNQEPSLSIAWNILPSCEQSSASEPWHFLLLLQALHDVETDFSGSPDRMMSAIDHAP 431
BLAST of mRNA_Ecto-sp8_S_contig11376.1742.1 vs. uniprot
Match: A0A7S3Y1V6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1V6_HETAK) HSP 1 Score: 95.5 bits (236), Expect = 4.380e-17 Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 1 GMGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRIDDDATLRNRFHRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHP 321
GMG+ A GG+K G K +TA ED AL A F +AKPGGS ++VN I +R + R G+R+ F +++G+AY++P+G HEF N+ P +SVAWN +P P
Sbjct: 169 GMGTTVACGGMKDGLKLITAVAPEDAPQALRAAGFTTYAKPGGSRHLVNPPIGP--AVRRLWARLGIRFACFELKKGDAYVIPAGVPHEFQNLEPSVSVAWNYLPSP 273 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11376.1742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11376.1742.1 >prot_Ecto-sp8_S_contig11376.1742.1 ID=prot_Ecto-sp8_S_contig11376.1742.1|Name=mRNA_Ecto-sp8_S_contig11376.1742.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=1330bp MGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRback to top mRNA from alignment at Ecto-sp8_S_contig11376:1..5425- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11376.1742.1 ID=mRNA_Ecto-sp8_S_contig11376.1742.1|Name=mRNA_Ecto-sp8_S_contig11376.1742.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5425bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11376:1..5425- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11376:1..5425- >mRNA_Ecto-sp8_S_contig11376.1742.1 ID=mRNA_Ecto-sp8_S_contig11376.1742.1|Name=mRNA_Ecto-sp8_S_contig11376.1742.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=3990bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11376:1..5425- (Ectocarpus species8 EcLAC_412)back to top |