mRNA_Ecto-sp8_S_contig11352.1718.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11352.1718.1 vs. uniprot
Match: A0A6H5KGP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP7_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 2.980e-136 Identity = 196/211 (92.89%), Postives = 200/211 (94.79%), Query Frame = 1
Query: 1 YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPDTPDSSDLRGPASRWHAFIDLCAAHHLPVGGRITGYLARPLPLERPGCVLSPLVAFPVDVPENCPYFPYGEAYIPLVTRAEAGAAKGAAXXXXXXAGTALASSLLLQSVKDRGNGRGGSSQERKRQKREVLEALVRESLGLSAIGH 633
YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPDTPDSSDLRGPASRWHAFIDLCAAHHLPVGGRITGYLARPLPLER GCVLSPLVAFPVDVP+NCPYFPYGEAYIPL+TRAE GAAKGAA AGTALASSLL+QSV+DRGNG GSSQERKRQKREVLEALVRESLGLSAI H
Sbjct: 43 YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPDTPDSSDLRGPASRWHAFIDLCAAHHLPVGGRITGYLARPLPLERSGCVLSPLVAFPVDVPKNCPYFPYGEAYIPLITRAETGAAKGAAAGGDDDAGTALASSLLVQSVQDRGNGSEGSSQERKRQKREVLEALVRESLGLSAINH 253
BLAST of mRNA_Ecto-sp8_S_contig11352.1718.1 vs. uniprot
Match: D7G1B4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B4_ECTSI) HSP 1 Score: 213 bits (541), Expect = 1.620e-66 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1
Query: 1 YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPDTPDSSDLRGPASRWHAFIDLCAAHHLPVGGRITG 300
YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPDTPDSSDLRGPASRWHAFIDLCAAHHLPVGGRITG
Sbjct: 118 YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPDTPDSSDLRGPASRWHAFIDLCAAHHLPVGGRITG 217
BLAST of mRNA_Ecto-sp8_S_contig11352.1718.1 vs. uniprot
Match: A0A6G0WAM0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAM0_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.650e-47 Identity = 81/146 (55.48%), Postives = 96/146 (65.75%), Query Frame = 1
Query: 1 YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPDTPDSSDLRGPASRWHAFIDLCAAHHLPVGGRITGYLARPLPLERPGCVLSPLVAFPVDVPENCPYFPYGEAYIPLVTRAE 438
YSA+RIQ + P SHTIIE DPV L +LR WA RP VR+V G WQ LA+LGEFD +FFDD+PLP T + SRWH F+DL H +GGR+TGYLAR + L R GC + L F V+ P NC YFPY A +PLVT E
Sbjct: 61 YSANRIQSYQPHSHTIIECDPVSLKQLRAWATTRPNVRVVAGTWQNMLASLGEFDCIFFDDYPLPQTERDESIFS-ISRWHEFLDLVLNWHTKLGGRVTGYLAREIDLTREGCSVK-LEPFKVEAPSNCNYFPYSHALVPLVTLIE 204
BLAST of mRNA_Ecto-sp8_S_contig11352.1718.1 vs. uniprot
Match: T0QRP7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QRP7_SAPDV) HSP 1 Score: 164 bits (416), Expect = 9.490e-47 Identity = 81/146 (55.48%), Postives = 100/146 (68.49%), Query Frame = 1
Query: 1 YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPDTPDSSDLRGPASRWHAFIDLCAAHHLPVGGRITGYLARPLPLERPGCVLSPLVAFPVDVPENCPYFPYGEAYIPLVTRAE 438
YSA +I +SP+++TIIE DPVV+AR++ WA + VRIV G WQT L L FD +FFDD+PLP + D SRW+ F+DL H + GRITGYLARPL LERPGC +S L A VDVP +C YFPY EA +PL+TR E
Sbjct: 58 YSATKIMTYSPKTYTIIECDPVVIARIKAWATSYSNVRIVHGAWQTQLPALPAFDCIFFDDYPLPQN-ERDDANHTISRWYEFLDLALNWHTKLHGRITGYLARPLSLERPGCTVS-LRAVSVDVPPHCSYFPYQEALVPLITRCE 201
BLAST of mRNA_Ecto-sp8_S_contig11352.1718.1 vs. uniprot
Match: A0A1V9ZAL4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAL4_9STRA) HSP 1 Score: 157 bits (398), Expect = 3.430e-44 Identity = 80/146 (54.79%), Postives = 96/146 (65.75%), Query Frame = 1
Query: 1 YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPDTPDSSDLRGPASRWHAFIDLCAAHHLPVGGRITGYLARPLPLERPGCVLSPLVAFPVDVPENCPYFPYGEAYIPLVTRAE 438
+SA +IQ P+S+TIIE DPVVLAR+R WA A VRI+ G WQT LA L E+D +FFDD+PLP + D SRW+ F+D H + GRITGYLARPL L RPGC +S L VDVP NC YFPY +A +PLV E
Sbjct: 58 FSATKIQTCKPKSYTIIECDPVVLARVRAWAEAYDNVRIIAGTWQTQLAALPEYDCIFFDDYPLPQN-ERDDANYTISRWYDFLDAVLNWHTKLHGRITGYLARPLDLTRPGCSVS-LTPVQVDVPANCTYFPYAQALVPLVVLVE 201
BLAST of mRNA_Ecto-sp8_S_contig11352.1718.1 vs. uniprot
Match: W4FTU6_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FTU6_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.960e-44 Identity = 80/146 (54.79%), Postives = 94/146 (64.38%), Query Frame = 1
Query: 1 YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPDTPDSSDLRGPASRWHAFIDLCAAHHLPVGGRITGYLARPLPLERPGCVLSPLVAFPVDVPENCPYFPYGEAYIPLVTRAE 438
YSA IQ +SP+SHTIIE DPV L L WA RP V IV G WQT LA+LG FD +FFDD+PLP T + SRWH F+D H+ VGGR+TGYLAR + L R GC ++ + F V VP NC YFPY A +PLVT E
Sbjct: 59 YSATHIQSYSPKSHTIIECDPVSLVELEVWAKTRPNVVIVAGTWQTVLASLGSFDCIFFDDYPLPQTERDESIFS-ISRWHDFLDATLNWHVNVGGRVTGYLAREIDLSRDGCHVA-MTPFEVQVPLNCTYFPYKTALVPLVTLVE 202
BLAST of mRNA_Ecto-sp8_S_contig11352.1718.1 vs. uniprot
Match: A0A024TBP2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBP2_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.690e-43 Identity = 80/148 (54.05%), Postives = 98/148 (66.22%), Query Frame = 1
Query: 1 YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPDTPDSSDLRGPASRWHAFIDLCAAHHLPVGGRITGYLARPLPLERPGC--VLSPLVAFPVDVPENCPYFPYGEAYIPLVTRAE 438
YSA RIQ ++P+SHTIIE DPV A L+ W+ +R V V G WQ+ L +LG FD VFFDD+PLP + SRWH F+DL H+ VGGR+TGYLARP+ L R GC V++P F VDVP+NC YFPY A +PLVT E
Sbjct: 62 YSATRIQSYNPKSHTIIECDPVSFAALQAWSKSRANVVAVPGSWQSMLPSLGAFDCVFFDDYPLPPIERDESMYS-LSRWHDFLDLALNWHVHVGGRVTGYLARPIDLRRDGCDVVMTP---FQVDVPDNCTYFPYHAALVPLVTLLE 205
BLAST of mRNA_Ecto-sp8_S_contig11352.1718.1 vs. uniprot
Match: A0A485KL38_9STRA (Aste57867_8776 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KL38_9STRA) HSP 1 Score: 152 bits (384), Expect = 6.480e-42 Identity = 76/143 (53.15%), Postives = 91/143 (63.64%), Query Frame = 1
Query: 1 YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPDTPDSSDLRGPASRWHAFIDLCAAHHLPVGGRITGYLARPLPLERPGCVLSPLVAFPVDVPENCPYFPYGEAYIPLVT 429
YSA RIQ F+PRSHTIIE DPV L +L WAA R V IV G WQ+ LA+LG FD +FFDD+PLP + SRWH F+D H +GGR+TGYLAR + L R GC ++ VDVP NC YFPY A +P +T
Sbjct: 58 YSASRIQSFAPRSHTIIECDPVCLKQLEAWAADRKNVTIVAGTWQSMLASLGAFDCIFFDDYPLPQMERDESIFS-ISRWHEFLDATLNWHTNLGGRVTGYLARDIDLRRDGCHVT-TTPLEVDVPANCNYFPYKTALVPCIT 198
BLAST of mRNA_Ecto-sp8_S_contig11352.1718.1 vs. uniprot
Match: A0A6A3L5H5_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L5H5_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.660e-36 Identity = 74/149 (49.66%), Postives = 95/149 (63.76%), Query Frame = 1
Query: 1 YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPDT-----PDSSDLRGPA-SRWHAFIDLCAAHHLPVGGRITGYLARPLPLERPGCVLSPLVAFPVDVPENCPYFPYGEAYIPLVT 429
YSA IQ F PRSHT+IE D L R + +AAA GV IV G WQ L TLG+FD +FFDD+PLP+ P S + G SRWH F+D+ A H G R++GYLAR + L+RPGC ++ + V VPENC YFP+ A +P++T
Sbjct: 60 YSASHIQTFRPRSHTVIECDRETLQRAQQFAAAHRGVEIVAGTWQQQLQTLGQFDCIFFDDYPLPELESGHLPTSEGVGGGRRSRWHEFLDV-ALEHCANGARVSGYLAREVDLQRPGCRVA-VTTVQVGVPENCNYFPHKAALVPVIT 206
BLAST of mRNA_Ecto-sp8_S_contig11352.1718.1 vs. uniprot
Match: A0A329T1W0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1W0_9STRA) HSP 1 Score: 138 bits (348), Expect = 4.240e-36 Identity = 77/149 (51.68%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 1 YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPLPD----TPDSSD--LRGPASRWHAFIDLCAAHHLPVGGRITGYLARPLPLERPGCVLSPLVAFPVDVPENCPYFPYGEAYIPLVT 429
YSA IQ F PR+H IIE D L R R +A GV IV G W+ L TL +FD VFFDD+PLP+ P +SD L SRWH F+D+ A H G RITGYLAR L L+RPGC +S + VDVPE+C YFP+ A +PL+T
Sbjct: 59 YSATHIQRFRPRNHVIIECDRETLQRARQFAVNHSGVAIVSGTWKRQLPTLDQFDCVFFDDYPLPELEKGNPLTSDGALGRQRSRWHDFLDI-AVKHCTTGARITGYLARQLDLQRPGCQVS-VSRVQVDVPEHCNYFPHKTALVPLIT 205 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11352.1718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11352.1718.1 >prot_Ecto-sp8_S_contig11352.1718.1 ID=prot_Ecto-sp8_S_contig11352.1718.1|Name=mRNA_Ecto-sp8_S_contig11352.1718.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=212bp YSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATback to top mRNA from alignment at Ecto-sp8_S_contig11352:3..1357+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11352.1718.1 ID=mRNA_Ecto-sp8_S_contig11352.1718.1|Name=mRNA_Ecto-sp8_S_contig11352.1718.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1355bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11352:3..1357+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11352:3..1357+ >mRNA_Ecto-sp8_S_contig11352.1718.1 ID=mRNA_Ecto-sp8_S_contig11352.1718.1|Name=mRNA_Ecto-sp8_S_contig11352.1718.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=636bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11352:3..1357+ (Ectocarpus species8 EcLAC_412)back to top |