mRNA_Ecto-sp8_S_contig1128.1644.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1128.1644.1 vs. uniprot
Match: D8LRA2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA2_ECTSI) HSP 1 Score: 518 bits (1334), Expect = 2.660e-181 Identity = 274/292 (93.84%), Postives = 278/292 (95.21%), Query Frame = 3
Query: 147 MATPGDIPTPTAESTSDSYNGGGITAAAIDVDVAAGELRRHDEEEE-VESVLSVWFDGCTADNHRTKWFAQGDALPRMDETIRKDFGNLVLRAEAGQLTDSWSERPRSMVALILLLDQFSRHLFRGAPDRDERVGRCDRLALPLTEALLDRGWQHGLTAEQHVFALMPLRHTPSEERLLRVMQEAEERVTRLRHSQELLQRFKKATKRRLQGIQDRAEEGAEILEHFEFDPPEPSQMDKHELVKVLRGFLDTKGAVATAARPPASGTPAGARRKCGGTDASASGGGNSGDAI 1019
MATPGDIPTPTAEST DSYNGGGITAAA+DVDVAAGE RRHDEEEE VESVLS+WFDG TADNHRTKWFAQGDALPRMDETIRK FG LVLRAEAGQLTDSWSERPRSMVALILLLDQFSRHLFRGAPDRDERV RCDRLALPLTEALLDRGWQHGLTAEQHVFALMPLRHTPSEERLLRVMQEAEER TRLR SQELLQRFKKATKRRLQGIQDRAEEGAEILEHFEFDPP+PSQMDKHELVKVLRGFLDTKGAVATAA PPA GTPAGARRK GGTDASASGG +SG AI
Sbjct: 1 MATPGDIPTPTAESTRDSYNGGGITAAAVDVDVAAGESRRHDEEEEEVESVLSLWFDGSTADNHRTKWFAQGDALPRMDETIRKGFGILVLRAEAGQLTDSWSERPRSMVALILLLDQFSRHLFRGAPDRDERVERCDRLALPLTEALLDRGWQHGLTAEQHVFALMPLRHTPSEERLLRVMQEAEERETRLRQSQELLQRFKKATKRRLQGIQDRAEEGAEILEHFEFDPPDPSQMDKHELVKVLRGFLDTKGAVATAAGPPALGTPAGARRKGGGTDASASGGRHSGGAI 292
BLAST of mRNA_Ecto-sp8_S_contig1128.1644.1 vs. uniprot
Match: A0A6H5L0I6_9PHAE (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I6_9PHAE) HSP 1 Score: 192 bits (487), Expect = 9.880e-51 Identity = 179/192 (93.23%), Postives = 181/192 (94.27%), Query Frame = 3
Query: 921 ARPPASGTPAGARRKCGGTDASASGGGNSGDAITGDCRDSADNHSVTPSDTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----ALRTVAVSLSGGVDSMALCRALVHLQPVYGFEVVGIHIDYGNRHESGREADFVQGWCARHGVVFYKRAI 1481
A PPA GTPAG RRK GGTDASASGGGNSGDAITGDC DSADNHSVTPSDTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ALRTVAVSLSGGVDSMALCRALVHLQPVYGFEV+GIHIDYGNRHESGREADFV+GWC RHGVVFYKRAI
Sbjct: 2 AGPPALGTPAGVRRKGGGTDASASGGGNSGDAITGDCTDSADNHSVTPSDTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALRTVAVSLSGGVDSMALCRALVHLQPVYGFEVMGIHIDYGNRHESGREADFVEGWCERHGVVFYKRAI 193
BLAST of mRNA_Ecto-sp8_S_contig1128.1644.1 vs. uniprot
Match: C1N3G9_MICPC (tRNA(Ile)-lysidine synthetase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N3G9_MICPC) HSP 1 Score: 153 bits (386), Expect = 3.030e-36 Identity = 147/410 (35.85%), Postives = 188/410 (45.85%), Query Frame = 3
Query: 288 ESVLSVWFDGCTADNHRTKWFAQGD---ALPR-MDETIRKDFGNLVLRAEAGQLTDSWSERPRSMVALILLLDQFSRHLFRGAPDRDERVGRCDRLALPLTEALLDRGWQHGLTAEQHVFALMPLRHTPSEE--RLLRVMQEAEERVTRLRHSQELLQRFKKATKRRLQGIQDRAE-EGAEILEHFEFDPPEPSQ--MDKHELVKVLRGFLDTKGAVATAARPPASGTPAGARRKCGGTDASASGGGNSGDAITGDCRDSADNHSVTPSDTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRTVAVSLSGGVDSMALCRALVHLQ---PVYGFEVVGIHIDYGNRHESGREADFVQGWCARHGVVFYKRAI 1481
+ VL+ WFDG DN++ KWF GD A+ R +D+ I + FG V AE+G L+ + PR+ AL +LLDQF+RH+ R APDRD R+ D +A+ + E ++RGW LT + VF LMP RH S RL + + R+ LL +F+K T R LQ ++ + +G EILE EF P + M H L + F+ + G P G D+ S P XXXXXXXXXXXXXXXXXXXX A V +SLSGGVDSMAL L L GF+VV +HIDY NR ESG EADFV+GWC R G+ R I
Sbjct: 9 DDVLAFWFDGDIDDNYKHKWFPAGDKTGAIQRKIDDDIARTFGATVAAAESGALSRWRDDSPRAACALAMLLDQFTRHVHRNAPDRDARLAAADAIAVDVAERCVERGWDAALTTPEQVFLLMPFRHGKSRTIPRLRVALARLDARIATHAQHASLLAKFRKTTLRCLQDMEGKQHADGDEILERSEFTPDAATDAMMASHALYATVDAFVRERA-----------GLPRG------------------------------DDRSRNPR-------------------------------WRRPPXXXXXXXXXXXXXXXXXXXXDEPSTSARRQHSPAWPAVGISLSGGVDSMALAVILKRLSRDASYGGFDVVAMHIDYDNRPESGVEADFVRGWCDRMGIECVVRKI 346
BLAST of mRNA_Ecto-sp8_S_contig1128.1644.1 vs. uniprot
Match: A0A7S0T1Q2_9CHLO (tRNA(Ile)-lysidine synthetase (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T1Q2_9CHLO) HSP 1 Score: 150 bits (378), Expect = 1.450e-35 Identity = 138/413 (33.41%), Postives = 174/413 (42.13%), Query Frame = 3
Query: 285 VESVLSVWFDGCTADNHRTKWFAQGDALP----RMDETIRKDFGNLVLRAEAGQLTDSWS-ERPRSMVALILLLDQFSRHLFRGAPDRDERVGRCDRLALPLTEALL--DRGWQHGLTAEQHVFALMPLRHTPSE-ERLLRVMQEAEERVTRLRHSQELLQRFKKATKRRLQGIQDRA-EEGAEILEHFEFDPPEP--SQMDKHELVKVLRGFLDTKGAVATAARPPASGTPAGARRKCGGTDASASGGGNSGDAITGDCRDSADNHSVTPSDTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRTVAVSLSGGVDSMALCRALVHLQ---PVYGFEVVGIHIDYGNRHESGREADFVQGWCARHGVVFYKRAI 1481
V+ VLS WFDG DN++ KWF GD R+D+ I + FG V AE G L DSW P S VAL+LLLDQF+RH++R PDRD +V D A+ +TE L DR W + HVF LMPLRHT RL + +ER LL +F+K T R LQ ++ + ++G EILE EF P + + M H + + + FL K + P+D N XXXXXXXX R++A+SLSGGVDSM L L HL P VV +HIDY NR SG EA FV+ WC RH +V R I
Sbjct: 36 VDDVLSFWFDGDLDDNYKRKWFPAGDKTGEMQRRVDDAIAERFGATVCAAERGDL-DSWRVTSPSSAVALVLLLDQFTRHVYRHHPDRDAKVAAADAAAVLVTERCLATDRRWDLRVPLPHHVFLLMPLRHTQKTVPRLRAALAAMDERRGADEAHAALLGKFQKTTLRCLQDMEGKQHQDGDEILEFHEFTPGDEVMAGMANHPVYQTVERFLRAK---------------------------------------------------LFPADNNGNGNTGSGGNXXXXXXXXESTARSQQSQPRASSSPPP-------------------------------RSIAISLSGGVDSMVLATVLKHLAASLPGARLAVVAMHIDYTNRPGSGAEAAFVEDWCRRHDIVCVVRTI 365
BLAST of mRNA_Ecto-sp8_S_contig1128.1644.1 vs. uniprot
Match: F0WKG8_9STRA (tRNA(Ile)-lysidine synthetase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WKG8_9STRA) HSP 1 Score: 147 bits (370), Expect = 2.360e-34 Identity = 120/406 (29.56%), Postives = 167/406 (41.13%), Query Frame = 3
Query: 285 VESVLSVWFDGCTADNHRTKWFAQGDA--LPRMDETIRKDFGNLVLRAEAGQLTDSWSERPRSMVALILLLDQFSRHLFRGAPDRDERVGRCDRLALPLTEALLDRGWQHGLTAEQHVFALMPLRHTPSEERLLRVMQEAEERVTRLRHSQELLQRFKKATKRRLQGIQDR-AEEGAEILEHFEFDPPEPSQMDKHELV--KVLRGFLDTKGAVATAARPPASGTPAGARRKCGGTDASASGGGNSGDAITGDCRDSADNHSVTPSDTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRTVAVSLSGGVDSMALCRAL--VHLQPVYGFEVVGIHIDYGNRHESGREADFVQGWCARHGVVFYKRAI 1481
V+ VLS WFDG +N++TKWF + +DE I F +L+ A+ GQL W R S++ALI++LDQFSRH++R DRDE V R D+L+ L L+++ W + Q+VFA+MP+RH+PS + L +++E + R +ELL +F + T++RL +Q + E+ + E E D HE V K ++ FL K A+ S TP VAVSLSGGVDSM L L V L Y + +V IHIDYGNR ES E +V+ WC R + FY R I
Sbjct: 7 VDDVLSFWFDGDQNENYKTKWFPPHSSHIQNEVDEEITHKFSSLLAEAQTGQLAH-WESRRASLLALIIVLDQFSRHIYRKRSDRDELVARNDKLSTKLVTHLIEKKWHLNMAIPQYVFAMMPIRHSPSAKGLKMLLKEVDSRKVLGHEEKELLDKFSRTTQQRLLHLQGTDSNTQTEVYDILERQLEEKDDGDVHETVLFKSIKRFLVNKNAL-----------------------------------------------SDTP--------------------------------------------------------------------------VAVSLSGGVDSMVLAYLLHKVRLSSHY-YGIVAIHIDYGNRPESAAECSYVKYWCDRLDIQFYARRI 289
BLAST of mRNA_Ecto-sp8_S_contig1128.1644.1 vs. uniprot
Match: C1E3H1_MICCC (tRNA(Ile)-lysidine synthetase n=3 Tax=Micromonas TaxID=38832 RepID=C1E3H1_MICCC) HSP 1 Score: 146 bits (369), Expect = 5.550e-34 Identity = 121/400 (30.25%), Postives = 170/400 (42.50%), Query Frame = 3
Query: 312 DGCTADNHRTKWFAQGDAL----PRMDETIRKDFGNLVLRAEAGQLTDSWSER-PRSMVALILLLDQFSRHLFRGAPDRDERVGRCDRLALPLTEALLDRGWQHGLTAEQHVFALMPLRHTPSE-ERLLRVMQEAEERVTRLRHSQELLQRFKKATKRRLQGIQDRAE-EGAEILEHFEFDP-PEPSQ-MDKHELVKVLRGFLDTKGAVATAARPPASGTPAGARRKCGGTDASASGGGNSGDAITGDCRDSADNHSVTPSDTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRTVAVSLSGGVDSMALCRALVHLQPVYG-FEVVGIHIDYGNRHESGREADFVQGWCARHGVVFYKRAI 1481
D + +N++ KWF GD R+D+ I FG + AE G L D+W++ P VAL++ LDQFSRH++R APDRD RV +CD + + + ++RGW + Q VF LMP RHT + RL + + R +LL +F++ T R LQ ++ + +G +ILE EF+P PE + M H + + + FL RRK I D H+ ++ R+VA+SLSGGVDSM L L P +G F+VV +HIDY NR ESG+EADFV+GWC R G+V R I
Sbjct: 75 DHASQENYKRKWFPAGDRTGEMQKRVDDAISHRFGATLAAAERGDL-DAWADASPSHAVALVVTLDQFSRHVYRHAPDRDARVAKCDAKCVGVVQTCVERGWDARVPTPQQVFLLMPFRHTQKDLPRLRLALGRLDARRETEAQCADLLAKFRRTTLRCLQDLEGKQHVDGDDILEFHEFEPQPEVLRSMPSHPVYRTVESFL---------------------RRKL----------------IEHDV------HTERGAEERP-------------------------------------------------------------------RSVAISLSGGVDSMVLATILKAAAPSFGDFDVVAMHIDYANRPESGKEADFVRGWCERKGIVCVVRRI 363
BLAST of mRNA_Ecto-sp8_S_contig1128.1644.1 vs. uniprot
Match: A0A5D6XV97_9STRA (tRNA(Ile)-lysidine synthetase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV97_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.110e-32 Identity = 126/403 (31.27%), Postives = 172/403 (42.68%), Query Frame = 3
Query: 282 EVESVLSVWFDGCTADNHRTKWFAQGDALPRM--DETIRKDFGNLVLRAEAGQLTDSWSERPRSMVALILLLDQFSRHLFRGAPDRDERVGRCDRLALPLTEALLDRGWQHGLTAEQHVFALMPLRHTPSEERLLRVMQEAEERVTRLRHSQELLQRFKKATKRRLQGIQDRAEEGAEILEHFEFDPPEPSQMDKHELVKVLRGFLDTKGAVATAARPPASGTPAGARRKCGGTDASASGGGNSGDAITGDCRDSADNHSVTPSDTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRTVAVSLSGGVDSMALCRALVHLQPVYG-FEVVGIHIDYGNRHESGREADFVQGWCARHGVVFYKRAI 1481
E +VL+ WFDG A+ HR +WF +++ + D + F +L+ RAE G+L D WS + ++VALI+LLDQ SRH+ RG D +V R D ALPL + LL RGW L A Q VFALMPLRH+P+ RL V+ E R R +LL++F++ T+ RL + PS D G D+ A T G DA A G ++ DA + A + P+ +AVSLSGGVDSM + L L+ ++G F VV +H+DY NR ESG E D+V+ WCAR G+ F+ R I
Sbjct: 13 EARAVLAFWFDGAPAELHRVRWFPPPNSVRQRSADADVANRFASLLTRAENGEL-DHWSTQREALVALIVLLDQLSRHVHRGD---DAQVRRNDARALPLAQTLLARGWDVALPAPQLVFALMPLRHSPTPARLHAVLAAVEACEGRRRAHDDLLEKFRRTTQNRLLHL--------------------PSSTD---------GDGDSNQAADT------------------GDDAQALGEDDA-DAAILEREFVATDERALPA----------------------------------------------------HRLYKAMHAYLTQMQASRYAYMAVSLSGGVDSMVVAYLLHKLRGLHGGFGVVAVHLDYANRAESGAECDYVRRWCARFGIAFHARRI 311
BLAST of mRNA_Ecto-sp8_S_contig1128.1644.1 vs. uniprot
Match: K3WP90_GLOUD (tRNA(Ile)-lysidine synthetase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP90_GLOUD) HSP 1 Score: 139 bits (350), Expect = 1.050e-31 Identity = 112/402 (27.86%), Postives = 164/402 (40.80%), Query Frame = 3
Query: 291 SVLSVWFDGCTADNHRTKWFAQ--GDALPRMDETIRKDFGNLVLRAEAGQLTDSWSERPRSMVALILLLDQFSRHLFRGAPDRDERVGRCDRLALPLTEALLDRGWQHGLTAEQHVFALMPLRHTPSEERLLRVMQEAEERVTRLRHSQELLQRFKKATKRRLQGIQDR--AEEGAEILEHFEFDPPEPSQMDKHELVKVLRGFLDTKGAVATAARPPASGTPAGARRKCGGTDASASGGGNSGDAITGDCRDSADNHSVTPSDTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRTVAVSLSGGVDSMALCRALVHLQPVYG-FEVVGIHIDYGNRHESGREADFVQGWCARHGVVFYKRAI 1481
++L WF G DN+R KWF D MD TI + FG L+ +A+ +L + W ++ + VALI+LLDQFSRH++R + E++ R D AL L +A + + W L Q VF +MP+RHTP+ ERL ++ EER T +LL++F++ T+ RLQ ++ E +ILE F + S M KH L K + +L A +AVSLSGGVDSM + L L+P++ F +V +H+DYGNR ES E ++V+ WC R G++F+ R I
Sbjct: 16 AILDFWFGGDQKDNYRAKWFPPEASDKQRVMDATIAERFGALLEQAQRHEL-EHWQQQRDTFVALIVLLDQFSRHVYRH--ENKEQLRRNDEHALALAQAFVAKNWHVNLDVPQFVFVMMPMRHTPTSERLHTLLDTIEERETLQTAHIDLLEKFRRTTQSRLQHLRGEKTVESDNDILERH-FMVTDESDMPKHRLYKAMNEYLVKMDA-------------------------------------------------------------------------------------------------------------------------KKYSHMAVSLSGGVDSMVVAYLLHKLRPLHNDFTIVAVHLDYGNREESHAECEYVRKWCERFGILFHVRRI 292
BLAST of mRNA_Ecto-sp8_S_contig1128.1644.1 vs. uniprot
Match: A0A024G3U4_9STRA (tRNA(Ile)-lysidine synthetase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G3U4_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.580e-31 Identity = 115/407 (28.26%), Postives = 171/407 (42.01%), Query Frame = 3
Query: 282 EVESVLSVWFDGCTADNHRTKWFA--QGDALPRMDETIRKDFGNLVLRAEAGQLTDSWSERPRSMVALILLLDQFSRHLFRGAPDRDERVGRCDRLALPLTEALLDRGWQHGLTAEQHVFALMPLRHTPSEERLLRVMQEAEERVTRLRHSQELLQRFKKATKRRL---QGIQDRAEEGAEILEHFEFDPPEPSQMDKHELVKVLRGFLDTKGAVATAARPPASGTPAGARRKCGGTDASASGGGNSGDAITGDCRDSADNHSVTPSDTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRTVAVSLSGGVDSMALCRAL--VHLQPVYGFEVVGIHIDYGNRHESGREADFVQGWCARHGVVFYKRAI 1481
+VE VLS WFDG +N++ KWF + ++D + + F L+ +A+ GQL + S RP S++ALI++LDQFSRH++R DRD+ V R D++++ L + L+++ W + +VFA+MPLRH+P E L +++E E+R +ELL +F + T++RL +G + ILE E S + + EL K ++ FL K A+ +DT+ VA+SLSGGVDSM L L V L Y + +V IHIDY NR ES E +V+ WC R + FY R I
Sbjct: 6 QVEQVLSFWFDGDQNENYKMKWFPPHKSHTQKQVDGEVTRQFFGLLEQAQGGQLVEWQSTRP-SLLALIIVLDQFSRHIYRNRSDRDDLVARNDKISITLVKHLIEKKWHVNMAIPHYVFAMMPLRHSPCTEGLTALLKEVEDRKVFGHAERELLDKFSRTTQQRLLHLKGTESSDTAVYNILERHLVQKDE-SGVHETELFKSIKTFLVNKNAL---------------------------------------------------NDTH----------------------------------------------------------------------VAISLSGGVDSMVLAYLLHKVRLSSQY-YGIVAIHIDYANRPESAAEHTYVKEWCDRLDIQFYARRI 288
BLAST of mRNA_Ecto-sp8_S_contig1128.1644.1 vs. uniprot
Match: A0A1Y5I9Y5_OSTTA (tRNA(Ile)-lysidine synthetase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5I9Y5_OSTTA) HSP 1 Score: 138 bits (348), Expect = 4.360e-31 Identity = 131/462 (28.35%), Postives = 182/462 (39.39%), Query Frame = 3
Query: 180 AESTSDSYNGGGITA---AAIDVDVAAGELRRHDEEEEVE---------SVLSVWFDGCTAD---NHRTKWFAQGDALPRMDETIRKDFGNLVLRAEA---GQLTDS---------WSERPRSMVALILLLDQFSRHLFRGAPDRDERVGRCDRLALPLTEALLD--RGWQHGLTAEQHVFALMPLRHTPSE-ERLLRVMQEAEERVTRLRHSQELLQRFKKATKRRLQGIQDRAEE-GAEILEHFEFDPPEP--SQMDKHELVKVLRGFLDTKGAVATAARPPASGTPAGARRKCGGTDASASGGGNSGDAITGDCRDSADNHSVTPSDTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRTVAVSLSGGVDSMALCRALVHLQPVYGFEVVGIHIDYGNRHESGREADFVQGWCARHGVVF 1466
A + S + GG A A+ +D A LR D++ ++ +V + WF + ++ KWFA D + +DE I + FG ++ E+ G+ D W+ P + AL+++LDQFSRH++R A DRD RVG DR+A+ + E LLD R W LT + VF LMP RHT RLLR ++ +ERV ++ELLQ+F+K T R Q ++ + E G ILE EF P E + M + L + F+ R+S T+AVSLSGGVDSM L L H G++VV +HIDY NR ES EADFV W RHG+ F
Sbjct: 582 ARTASSMHTNGGARARARVAMSIDDAMDALRLIDDDVSIDDELVRSTSSAVRAYWFPNRSQTLEAAYKKKWFATNDDVRSVDEEIERTFGGVLRAIESATSGEEVDRESVLRAHERWTREPSTTAALVVMLDQFSRHMYRKAEDRDARVGANDRVAIIIAEDLLDNKREWLSELTVPEQVFVLMPFRHTQKTCPRLLRCLELIDERVGLEDENRELLQKFRKTTLRCYQDLEGKQHEAGDNILERQEFTPSEEVMATMSSNSLYNTIEEFM----------------------------------------------RESMHEFG---------------------------------------------------------------------------NTIAVSLSGGVDSMVLAYILKH----QGYDVVTLHIDYKNRPESTEEADFVDDWSVRHGMKF 918 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1128.1644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1128.1644.1 >prot_Ecto-sp8_S_contig1128.1644.1 ID=prot_Ecto-sp8_S_contig1128.1644.1|Name=mRNA_Ecto-sp8_S_contig1128.1644.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=445bp MATPGDIPTPTAESTSDSYNGGGITAAAIDVDVAAGELRRHDEEEEVESVback to top mRNA from alignment at Ecto-sp8_S_contig1128:4..5744- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1128.1644.1 ID=mRNA_Ecto-sp8_S_contig1128.1644.1|Name=mRNA_Ecto-sp8_S_contig1128.1644.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5741bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1128:4..5744- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1128:4..5744- >mRNA_Ecto-sp8_S_contig1128.1644.1 ID=mRNA_Ecto-sp8_S_contig1128.1644.1|Name=mRNA_Ecto-sp8_S_contig1128.1644.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1335bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1128:4..5744- (Ectocarpus species8 EcLAC_412)back to top |