mRNA_Ecto-sp8_S_contig11276.1640.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11276.1640.1 vs. uniprot
Match: D8LH13_ECTSI (Flagellar associated protein, cobalamin adenosyltransferase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH13_ECTSI) HSP 1 Score: 512 bits (1318), Expect = 7.900e-180 Identity = 275/281 (97.86%), Postives = 278/281 (98.93%), Query Frame = 1
Query: 1 AGYSGGNVSLATALVGGSVGLGYMAFRLASQAQRRSLTGANGRXXXXXXXXX-DERPMLDMAEIARRAVPRKKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLAIAVAHSELARNGLSEMLVAIQSLIIDASALVATPRDSSSARKINRTGFPTWCTDQLEACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKKLPVIKVKDDEDEGAPQNPPEQGP 840
AGYSGGNVSLATALV GSVGLGYMA RLASQAQRRSLTGANGRXXXXXXXXX DERPMLDMAEIARRAVPRKKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLA+AVAHSELARNGLSEMLVAIQSLIIDASALVATPRD+SSARKI+RTGFPTWCTDQLEACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKKLPVIKVKDDEDEGAPQNPPEQGP
Sbjct: 3 AGYSGGNVSLATALVAGSVGLGYMALRLASQAQRRSLTGANGRXXXXXXXXXXDERPMLDMAEIARRAVPRKKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLALAVAHSELARNGLSEMLVAIQSLIIDASALVATPRDNSSARKISRTGFPTWCTDQLEACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKKLPVIKVKDDEDEGAPQNPPEQGP 283
BLAST of mRNA_Ecto-sp8_S_contig11276.1640.1 vs. uniprot
Match: A0A6H5LRA6_9PHAE (Cob_adeno_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRA6_9PHAE) HSP 1 Score: 259 bits (663), Expect = 2.660e-82 Identity = 136/148 (91.89%), Postives = 137/148 (92.57%), Query Frame = 1
Query: 70 MAFRLASQAQRRSLTGANGRXXXXXXXXXDERPMLDMAEIARRAVPRKKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLAIAVAHSELARNGLSEMLVAIQSLIIDASALVATPRDSSSARKINRTGFPTWCTDQLE 513
MAFRLASQAQRRSLTGANGR DERPMLDMAEIARRAVPRKKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLA+AVAHSELARNGLSEMLVAIQSLIIDASALVATPRD SSARKINRTGFP WCTDQLE
Sbjct: 1 MAFRLASQAQRRSLTGANGRGSGGGGEGGDERPMLDMAEIARRAVPRKKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLALAVAHSELARNGLSEMLVAIQSLIIDASALVATPRDKSSARKINRTGFPAWCTDQLE 148
BLAST of mRNA_Ecto-sp8_S_contig11276.1640.1 vs. uniprot
Match: A0A6H5LA73_9PHAE (Cob_adeno_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA73_9PHAE) HSP 1 Score: 222 bits (565), Expect = 2.960e-68 Identity = 107/110 (97.27%), Postives = 109/110 (99.09%), Query Frame = 1
Query: 511 EACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKKLPVIKVKDDEDEGAPQNPPEQGP 840
EACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKKLPV+KVKDDEDEGAPQN PE+GP
Sbjct: 13 EACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKKLPVLKVKDDEDEGAPQNLPEKGP 122
BLAST of mRNA_Ecto-sp8_S_contig11276.1640.1 vs. uniprot
Match: A0A835Z3S8_9STRA (Cob(I)alamin adenosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3S8_9STRA) HSP 1 Score: 221 bits (564), Expect = 2.060e-66 Identity = 118/205 (57.56%), Postives = 145/205 (70.73%), Query Frame = 1
Query: 166 PMLDMAEIA-RRAVPR-KKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLAIAVAHSELARNGLSEMLVAIQSLIIDASALVATPRDSSSARKINRTGFPTWCTDQLEACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKKL 774
P L +IA RRAV + KKS LYT++GDKG S LY+ E R K+D +F+ALG DELN+ + +A + LA NGL E+L IQS + D A +ATPRD +S K+ +T FP CT ++E IDELD++ PPLKTFI+P GGLAA HLHLAR VCRRAERS PL+ G+ EV RY+NRLSD LFAAARYAS V+G PE W K
Sbjct: 35 PALTFDDIAARRAVAKPKKSILYTKTGDKGASSLYSGERRSKTDATFQALGASDELNSVIGVAREYCVLAGNGLDELLAEIQSRLFDVGACIATPRDKASEAKLAKTAFPPKCTMEVEFAIDELDSKLPPLKTFILPSGGLAAVHLHLARVVCRRAERSAIPLVEAGEVDPEVGRYLNRLSDFLFAAARYASHVEGAPETSWVKF 239
BLAST of mRNA_Ecto-sp8_S_contig11276.1640.1 vs. uniprot
Match: A0A835Z8K8_9STRA (Cobalamin adenosyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8K8_9STRA) HSP 1 Score: 204 bits (520), Expect = 9.590e-60 Identity = 105/191 (54.97%), Postives = 135/191 (70.68%), Query Frame = 1
Query: 193 RRAVPRKKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLAIAVAHSELARNGLSEMLVAIQSLIIDASALVATPRDSSSARKINRTGFPTWCTDQLEACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPW 765
RR KKS LYTR+GDKG+S L++ E R K+DP+F A+G DELN+ +A + +A NGL +L IQS ++D A +ATPR+ S+ K+ +T FP CT +LE IDELD++ P LKTFI+P GGLAA+HLH+AR VCRRAER++ PLL G EV RYINRLSD FAAARYA++ +G ER W
Sbjct: 53 RRETRLKKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMW 243
BLAST of mRNA_Ecto-sp8_S_contig11276.1640.1 vs. uniprot
Match: A0A7S3GR11_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GR11_9STRA) HSP 1 Score: 190 bits (482), Expect = 1.050e-53 Identity = 103/193 (53.37%), Postives = 129/193 (66.84%), Query Frame = 1
Query: 202 VPRKKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLAIAVAHSELARNGLSEMLVAIQSLIIDASALVATPRDSSSARKINRTGFPTWCTDQLEACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKKLPV 780
V RKKS LYT++GDKG S LYN E R K+D F LG+ DELNA++ +A + L+ NGL ML IQS + D A VATP +SSS K+ T F T +LE ID+LDA+ PPL F++P GGL+A+HL+LAR +CRRAERS+ PL+ EV RY+NRLSDLLFAA R AS+ + K E W K P
Sbjct: 85 VKRKKSALYTKTGDKGMSSLYNGERRSKNDMIFHTLGHQDELNAAIGVASEYCMLSNNGLQPMLSEIQSRLFDLGAAVATPVNSSSEAKVAYTKFSPKFTARLEEWIDDLDAKLPPLTNFVIPSGGLSATHLNLARTICRRAERSVVPLVEDDLVDGEVGRYLNRLSDLLFAAQRTASMRENKEEFLWIKAPA 277
BLAST of mRNA_Ecto-sp8_S_contig11276.1640.1 vs. uniprot
Match: A0A662WEE6_9STRA (Cob_adeno_trans domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WEE6_9STRA) HSP 1 Score: 186 bits (472), Expect = 6.900e-53 Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 1
Query: 163 RPMLDMAEIARRAVPRKKSF-LYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLAIAVAHSELARNG-LSEMLVAIQSLIIDASALVATPRDSSSARKINRTG-FPTWCTDQLEACIDELDARTPPLKTFIVP-GGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKKLPVIKVK 792
RP+L IA AV R + +YT++GDKGTSQL++ E RPK D F+ALG+ DELNA + +AV + L N L + L IQS + D A VATP ++S K RTG F QLE IDE+D PPLK FI+P GGGLA++HLH+AR VCRRAERS+ PL+ G V RY+NRLSD LF +AR+A+V +GK E W + VK
Sbjct: 7 RPLLPPRAIAALAVARSRGMKVYTKTGDKGTSQLFSGERRPKDDAVFQALGDTDELNAQIGVAVEQARLVNNDILPQRLEQIQSRLFDLGACVATPLTTASQSKQKRTGTFDDANVAQLEQWIDEMDLELPPLKCFILPSGGGLASTHLHVARAVCRRAERSVVPLVAAGDVEGVVQRYLNRLSDFLFVSARFAAVREGKEETKWVNQNIKPVK 220
BLAST of mRNA_Ecto-sp8_S_contig11276.1640.1 vs. uniprot
Match: A0A4D9CVG6_9STRA (Cob_adeno_trans domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVG6_9STRA) HSP 1 Score: 183 bits (464), Expect = 2.360e-51 Identity = 97/187 (51.87%), Postives = 127/187 (67.91%), Query Frame = 1
Query: 211 KKSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLAIAVAHSELARNGLSEMLVAIQSLIIDASALVATPRDSSSARKINRTGFPTWCTDQLEACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKK 771
KKS +YTR+GDKGTS LYN E RPK+D +FEALG DELNA++ +A H+ A++GL L IQS ++D A VATP +S K RT F ++E ID++D+R P LK FI+P GG+ ++HLHLAR +CRRAERS+ PL+ + Q EV Y+NRLSD LF AAR+A+ +G E W K
Sbjct: 70 KKSGIYTRTGDKGTSSLYNGERRPKNDLTFEALGATDELNAAIGVAKEHAS-AKSGLERPLSQIQSRLLDLGAAVATPAQTSDEHKRERTRFDHLHVVKVEEWIDDMDSRLPALKNFILPSGGVCSAHLHLARTICRRAERSIIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVWVK 255
BLAST of mRNA_Ecto-sp8_S_contig11276.1640.1 vs. uniprot
Match: A0A2P4YRB9_9STRA (ATP:cob(I)alamin adenosyltransferase (Fragment) n=3 Tax=Phytophthora TaxID=4783 RepID=A0A2P4YRB9_9STRA) HSP 1 Score: 179 bits (455), Expect = 6.790e-51 Identity = 100/184 (54.35%), Postives = 125/184 (67.93%), Query Frame = 1
Query: 223 LYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLAIAVAHSELARNG-LSEMLVAIQSLIIDASALVATPRDSSSARKINRTG-FPTWCTDQLEACIDELDARTPPLKTFIVP-GGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPW 765
+YT++GDKGTSQL++ E RPK+D F+ALG+ DELNA + +AV + LA N L L IQS + D A VATP S+S K RTG F QLE ID +DA PPLK FI+P GGGLA++HLH+AR VCRRAERS+ PL+ G V RY+NRLSD LF +ARYA++ +GK E W
Sbjct: 3 VYTKTGDKGTSQLFSGERRPKNDAVFQALGDTDELNAQIGVAVEQARLAANASLPPQLEQIQSRLFDLGACVATPLTSASETKQRRTGVFDEANVTQLEHWIDAMDAELPPLKCFILPSGGGLASTHLHVARAVCRRAERSVVPLVAAGDVDGVVQRYLNRLSDFLFVSARYAALKEGKEETKW 186
BLAST of mRNA_Ecto-sp8_S_contig11276.1640.1 vs. uniprot
Match: A0A7S1UE78_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE78_9STRA) HSP 1 Score: 182 bits (462), Expect = 2.160e-50 Identity = 94/187 (50.27%), Postives = 130/187 (69.52%), Query Frame = 1
Query: 214 KSFLYTRSGDKGTSQLYNMETRPKSDPSFEALGNMDELNASLAIAVAHSELARNGLSEMLVAIQSLIIDASALVATPRDSSSA-RKINRTGFPTWCTDQLEACIDELDARTPPLKTFIVPGGGLAASHLHLARCVCRRAERSLQPLLGTGQGVEEVARYINRLSDLLFAAARYASVVDGKPERPWKK 771
KS LYTR+GD G S LYNME R K D FEALG +DEL+A L +A H+ + NGL + + +IQS +ID A + TPR+++++ RK+ RT FP +LE D LD++ PPL+ FI+ GGG A+HLH+AR VCRR+ER + L+ +GQ V +++NRLSD LFAAARYA++ +GK E ++K
Sbjct: 114 KSKLYTRTGDGGVSSLYNMERREKDDLVFEALGAVDELHAHLGVAAEHAIMVGNGLHDTIRSIQSRLIDVGAAIGTPRETTTSDRKLKRTEFPEHYVLRLERYADALDSQLPPLRNFILAGGGFCAAHLHVARTVCRRSERVVVGLIRSGQTEPSVGKFLNRLSDTLFAAARYAALCEGKGETAYRK 300 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11276.1640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11276.1640.1 >prot_Ecto-sp8_S_contig11276.1640.1 ID=prot_Ecto-sp8_S_contig11276.1640.1|Name=mRNA_Ecto-sp8_S_contig11276.1640.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=258bp MAFRLASQAQRRSLTGANGRGGGGGGEGGDERPMLDMAEIARRAVPRKKSback to top mRNA from alignment at Ecto-sp8_S_contig11276:2802..6529- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11276.1640.1 ID=mRNA_Ecto-sp8_S_contig11276.1640.1|Name=mRNA_Ecto-sp8_S_contig11276.1640.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3728bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11276:2802..6529- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11276:2802..6529- >mRNA_Ecto-sp8_S_contig11276.1640.1 ID=mRNA_Ecto-sp8_S_contig11276.1640.1|Name=mRNA_Ecto-sp8_S_contig11276.1640.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=774bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11276:2802..6529- (Ectocarpus species8 EcLAC_412)back to top |