mRNA_Ecto-sp8_S_contig11273.1637.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig11273.1637.1
Unique NamemRNA_Ecto-sp8_S_contig11273.1637.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig11273.1637.1 vs. uniprot
Match: D7G191_ECTSI (Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G191_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 5.100e-23
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 
Query:   10 QVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTL 156
            QVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTL
Sbjct:  317 QVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTL 365
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BLAST of mRNA_Ecto-sp8_S_contig11273.1637.1 vs. uniprot
Match: UPI00063EF789 (probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase n=1 Tax=Monomorium pharaonis TaxID=307658 RepID=UPI00063EF789)

HSP 1 Score: 62.8 bits (151), Expect = 3.640e-10
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 1 
Query:   13 VSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALAST 153
            V +RLFPFSRG+FEDKVAN+W  ++VV+KLRR L   QLAK+ L +T
Sbjct:  276 VVLRLFPFSRGVFEDKVANVWCAINVVYKLRRILTNAQLAKICLVTT 322
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BLAST of mRNA_Ecto-sp8_S_contig11273.1637.1 vs. uniprot
Match: A0A5C5FWF1_9BASI (Dolichyl-P-Glc:Man(9)GlcNAc(2)-PP-dolichol alpha-1,3-glucosyltransferase n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5FWF1_9BASI)

HSP 1 Score: 62.4 bits (150), Expect = 4.990e-10
Identity = 30/44 (68.18%), Postives = 36/44 (81.82%), Query Frame = 1 
Query:   22 RLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALAST 153
            R+FPF+RGLFEDKVAN+W  L+VV KLR  +PV  LAKLAL +T
Sbjct:  388 RIFPFARGLFEDKVANVWCALNVVVKLRDLVPVSTLAKLALVAT 431
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BLAST of mRNA_Ecto-sp8_S_contig11273.1637.1 vs. uniprot
Match: A0A0D6EQB9_SPOSA (Alpha-1,3-glucosyltransferase n=1 Tax=Sporidiobolus salmonicolor TaxID=5005 RepID=A0A0D6EQB9_SPOSA)

HSP 1 Score: 61.6 bits (148), Expect = 9.320e-10
Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 1 
Query:   10 QVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALAST 153
            Q   R+FPFSRGLFEDKVAN W  L+VV KLR    VP LA+LAL +T
Sbjct:  486 QALERIFPFSRGLFEDKVANAWCALNVVVKLRELASVPVLARLALGAT 533
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BLAST of mRNA_Ecto-sp8_S_contig11273.1637.1 vs. uniprot
Match: UPI001BB178FB (dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase-like isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB178FB)

HSP 1 Score: 61.2 bits (147), Expect = 1.270e-9
Identity = 29/52 (55.77%), Postives = 40/52 (76.92%), Query Frame = 1 
Query:    1 QQTQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTL 156
            Q  Q+  R+FPF+RGLFEDKV+N+W  L+V+ KL+ +L  P L +L+LASTL
Sbjct:  256 QILQIIHRIFPFARGLFEDKVSNVWCSLNVLIKLKNKLSQPSLIQLSLASTL 307
[Close]
BLAST of mRNA_Ecto-sp8_S_contig11273.1637.1 vs. uniprot
Match: A0A2X0NWC5_9BASI (Dolichyl-P-Glc:Man(9)GlcNAc(2)-PP-dolichol alpha-1,3-glucosyltransferase n=3 Tax=Microbotryum TaxID=34416 RepID=A0A2X0NWC5_9BASI)

HSP 1 Score: 61.2 bits (147), Expect = 1.280e-9
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:   10 QVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTL 156
            Q+  R+FPFSRGLFEDKVAN W  ++VV KLR+   V  LA+LAL  TL
Sbjct:  622 QILARIFPFSRGLFEDKVANFWCAINVVVKLRQLASVASLARLALVFTL 670
[Close]
BLAST of mRNA_Ecto-sp8_S_contig11273.1637.1 vs. uniprot
Match: G7DT66_MIXOS (Dolichyl-P-Glc:Man(9)GlcNAc(2)-PP-dolichol alpha-1,3-glucosyltransferase n=2 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7DT66_MIXOS)

HSP 1 Score: 61.2 bits (147), Expect = 1.280e-9
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 1 
Query:    1 QQTQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTL 156
            Q  Q   R+FPF RGLFEDKVAN W  L+VV KLR+   +P LA+LAL +TL
Sbjct:  572 QLLQTLHRIFPFQRGLFEDKVANFWCGLNVVIKLRQLASIPVLARLALVATL 623
[Close]
BLAST of mRNA_Ecto-sp8_S_contig11273.1637.1 vs. uniprot
Match: A0A2G8LD32_STIJA (Alpha-1,3-glucosyltransferase n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LD32_STIJA)

HSP 1 Score: 60.8 bits (146), Expect = 1.410e-9
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:   10 QVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTL 156
            QV  RLFPF RGLFEDKV+N+W  LDV+FKL+R +    L  L+LA+T+
Sbjct:   98 QVLRRLFPFGRGLFEDKVSNIWCVLDVLFKLKRNIAPDHLVLLSLATTI 146
[Close]
BLAST of mRNA_Ecto-sp8_S_contig11273.1637.1 vs. uniprot
Match: A5E0J5_LODEL (Alpha-1,3-glucosyltransferase n=1 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5E0J5_LODEL)

HSP 1 Score: 60.8 bits (146), Expect = 1.740e-9
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:   10 QVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTL 156
            Q+ +R+FPF+RGLFEDKVAN W   +V+ K R  L   QL+KLALA+TL
Sbjct:  347 QILIRVFPFNRGLFEDKVANFWCTTNVIIKYREFLDSSQLSKLALAATL 395
[Close]
BLAST of mRNA_Ecto-sp8_S_contig11273.1637.1 vs. uniprot
Match: A0A0P9GJT1_RHOGW (Alpha-1,3-glucosyltransferase n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A0P9GJT1_RHOGW)

HSP 1 Score: 60.8 bits (146), Expect = 1.740e-9
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:   22 RLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALAST 153
            R+FPF+RGLFEDKVAN+W  L+VV KLR  +P   LAKLAL +T
Sbjct:  420 RIFPFARGLFEDKVANVWCALNVVVKLRDLVPTSTLAKLALVAT 463
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11273.1637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G191_ECTSI5.100e-23100.00Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus T... [more]
UPI00063EF7893.640e-1063.83probable dolichyl pyrophosphate Man9GlcNAc2 alpha-... [more]
A0A5C5FWF1_9BASI4.990e-1068.18Dolichyl-P-Glc:Man(9)GlcNAc(2)-PP-dolichol alpha-1... [more]
A0A0D6EQB9_SPOSA9.320e-1064.58Alpha-1,3-glucosyltransferase n=1 Tax=Sporidiobolu... [more]
UPI001BB178FB1.270e-955.77dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-gluco... [more]
A0A2X0NWC5_9BASI1.280e-961.22Dolichyl-P-Glc:Man(9)GlcNAc(2)-PP-dolichol alpha-1... [more]
G7DT66_MIXOS1.280e-959.62Dolichyl-P-Glc:Man(9)GlcNAc(2)-PP-dolichol alpha-1... [more]
A0A2G8LD32_STIJA1.410e-959.18Alpha-1,3-glucosyltransferase n=1 Tax=Stichopus ja... [more]
A5E0J5_LODEL1.740e-959.18Alpha-1,3-glucosyltransferase n=1 Tax=Lodderomyces... [more]
A0A0P9GJT1_RHOGW1.740e-965.91Alpha-1,3-glucosyltransferase n=1 Tax=Rhodotorula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11273contigEcto-sp8_S_contig11273:421..576 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score99.8
Seed ortholog evalue4.1e-19
Seed eggNOG ortholog2880.D7G191
Preferred nameALG6
Model size156
KEGG koko:K03848
KEGG ReactionR06262
KEGG Pathwayko00510,ko01100,map00510,map01100
KEGG ModuleM00055
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003824,GO:0004583,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006091,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009060,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0015980,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0034645,GO:0036211,GO:0040003,GO:0042175,GO:0042281,GO:0042335,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046527,GO:0048856,GO:0055114,GO:0070085,GO:0071704,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
Exons1
EggNOG free text desc.dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
EggNOG OGsKOG2575@1,KOG2575@2759
EC2.4.1.267
Cds size156
COG Functional cat.M
CAZyGT57
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143206.2981956-CDS-Ecto-sp8_S_contig11273:420..5761681143206.2981956-CDS-Ecto-sp8_S_contig11273:420..576Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11273 421..576 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11273.1637.1prot_Ecto-sp8_S_contig11273.1637.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig11273 421..576 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig11273.1637.1

>prot_Ecto-sp8_S_contig11273.1637.1 ID=prot_Ecto-sp8_S_contig11273.1637.1|Name=mRNA_Ecto-sp8_S_contig11273.1637.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=52bp
QQTQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALAS
TL
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mRNA from alignment at Ecto-sp8_S_contig11273:421..576+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig11273.1637.1 ID=mRNA_Ecto-sp8_S_contig11273.1637.1|Name=mRNA_Ecto-sp8_S_contig11273.1637.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=156bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11273:421..576+ (Ectocarpus species8 EcLAC_412)
CAACAAACACAGGTGTCAGTGAGGTTGTTCCCTTTCTCTCGGGGACTGTT
TGAGGACAAGGTCGCCAACCTCTGGTTCTGCCTCGATGTCGTATTCAAGC
TGAGGAGGAGGCTGCCGGTGCCGCAACTCGCGAAGCTGGCTCTCGCGTCG
ACGCTG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11273:421..576+

>mRNA_Ecto-sp8_S_contig11273.1637.1 ID=mRNA_Ecto-sp8_S_contig11273.1637.1|Name=mRNA_Ecto-sp8_S_contig11273.1637.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=156bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11273:421..576+ (Ectocarpus species8 EcLAC_412)
CAACAAACACAGGTGTCAGTGAGGTTGTTCCCTTTCTCTCGGGGACTGTT
TGAGGACAAGGTCGCCAACCTCTGGTTCTGCCTCGATGTCGTATTCAAGC
TGAGGAGGAGGCTGCCGGTGCCGCAACTCGCGAAGCTGGCTCTCGCGTCG
ACGCTG
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