mRNA_Ecto-sp8_S_contig11265.1627.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11265.1627.1 vs. uniprot
Match: A0A835YZX1_9STRA (Flagellar C1a complex subunit C1a-32-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZX1_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.860e-42 Identity = 64/129 (49.61%), Postives = 92/129 (71.32%), Query Frame = 1
Query: 409 EKERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELVLRHAVDRPPWTTGVLIPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEPPLAP 795
EK V++DFH YNYAFCKE+RFD + TST++SIM D+L +D+ +D S + SF+RF +L+LRH V+RPPW+ G+ +D+ IT+YV YYRH+ +YKH+FT ++ + QR+ HG EEP + P
Sbjct: 15 EKTEVLVDFHLYNYAFCKEQRFDTQKTSTYMSIMTDVLKQDLSQDDPVSGQQASFDRFRDLILRHCVERPPWSVGIFTLEDVAGITEYVVN--SYYRHYRIYKHLFTARVETTLTQRNLHGTEEPRIPP 141
BLAST of mRNA_Ecto-sp8_S_contig11265.1627.1 vs. uniprot
Match: A0A6V1RZL7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RZL7_HETAK) HSP 1 Score: 138 bits (348), Expect = 6.310e-37 Identity = 69/182 (37.91%), Postives = 107/182 (58.79%), Query Frame = 1
Query: 211 MATSVAWKHFSPEQISCLEAALEHEQCKTLLALYLGLGGANCLEHCGTEGRGARIDDASARTNSLTEKERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELVLRHAVDRPPWTTGVLIPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQ 756
M SV WKHF+ Q+ LEAA + +CK LL YL +I+DA +++ ++LDFH+YNYAFCK+ F STFLSIMKD +D+D +D+ ++++ SF + ++ +L H ++RPPW+ G+ P+D+ ++D+V YYR F LYK++FT ++ V Q
Sbjct: 1 MTDSVLWKHFTEAQLRELEAARDPVECKGLLKSYL------------------KIEDAGFDR----DRQDILLDFHFYNYAFCKKLGFGPTKISTFLSIMKDTIDKDFSQHDAVNTIKASFEQLKKTLLMHCIERPPWSVGIFQPEDLQLLSDFVLN--GYYRQFRLYKYLFTRRVQVEFTQ 158
BLAST of mRNA_Ecto-sp8_S_contig11265.1627.1 vs. uniprot
Match: A0A7S2SS91_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS91_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.710e-28 Identity = 57/125 (45.60%), Postives = 79/125 (63.20%), Query Frame = 1
Query: 409 EKERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELVLRHAVDRPPWTTGVLIPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEP 783
E++ VV +F++Y YAFCKE FDA TSTF+SI K +D ++ + +++SF RF+ELVL HAV+R PW V D+ I Y+ Y+RHF +YK IFT K+ V ++Q PH VE P
Sbjct: 46 EQKEVVEEFYFYCYAFCKESGFDASKTSTFMSIAKATFHDDRSRDEFSCGMKQSFARFKELVLSHAVNRSPWAVRVFSEDDVARIISYMLN--SYFRHFKMYKLIFTRKLQVTLDQSEPHLVEPP 168
BLAST of mRNA_Ecto-sp8_S_contig11265.1627.1 vs. uniprot
Match: W2PIE1_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PIE1_PHYPN) HSP 1 Score: 111 bits (278), Expect = 1.940e-26 Identity = 63/191 (32.98%), Postives = 99/191 (51.83%), Query Frame = 1
Query: 211 MATSVAWKHFSPEQISCLEAALEHEQCKTLLALYLGLGGANCLEHCGTEGRGARIDDASARTNSLTEKERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELVLRHAVDRPPWTTGVLIPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEP 783
M ++ WKH S +++ L + CK+ LA L + D EK+R +LDFH +NY+FC++R F+ TS FL I + ++ D +DST+ L+ SF F+ ++L H+V+R P + G+ +++ I DYVA YYRHF LYK I+T ++ QR + V+ P
Sbjct: 1 MTEAIVWKHASERELAQLATRHSVDDCKSALAEIFELD----------------LSD---------EKQRFLLDFHLHNYSFCRQRHFELNQTSVFLGICQTLMKRDF-ASDSTTDLKSSFEFFQAMLLTHSVNRSPKSVGIFSREEVATIVDYVAN--SYYRHFQLYKCIYTPYYHLHFVQREINDVQTP 163
BLAST of mRNA_Ecto-sp8_S_contig11265.1627.1 vs. uniprot
Match: A0A329RNJ7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RNJ7_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 3.300e-21 Identity = 61/201 (30.35%), Postives = 96/201 (47.76%), Query Frame = 1
Query: 211 MATSVAWKHFSPEQISCLEAALEHEQCKTLLALYLGLGGANCLEHCGTEGRGARIDDASARTNSLTEKERVVLDFHYYNYAF----------CKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELVLRHAVDRPPWTTGVLIPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEP 783
M ++ WKH S +++ L + CK+ LA L A+ EK+ +LDFH +NY++ C +R F TS L I + ++ D DST++L+ SF+ F+ ++L H+V+R P + G+ +++ AI DYV YYRHF LYK I+T +V QR + V+ P
Sbjct: 1 MTEAIVWKHASERELAQLATRHSVDDCKSALAEIFELDLAD-------------------------EKQSFLLDFHLHNYSYPFFLHCAMDYCLQRHFQLNQTSVLLGICQTLMKRDF-ARDSTTNLKSSFDFFQAILLTHSVNRSPKSVGIFSREEVAAIVDYVTN--SYYRHFQLYKCIYTPYYHVHFVQREINDVQTP 173
BLAST of mRNA_Ecto-sp8_S_contig11265.1627.1 vs. uniprot
Match: A0A6A3P3Y5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P3Y5_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 8.230e-21 Identity = 60/195 (30.77%), Postives = 96/195 (49.23%), Query Frame = 1
Query: 211 MATSVAWKHFSPEQISCLEAALEHEQCKTLLALYLGLGGANCLEHCGTEGRGARIDDASARTNSLTEKERVVLDFHYYNYAFCKE----RRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELVLRHAVDRPPWTTGVLIPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEP 783
M ++ WKH + +++ L + CK+ LA L ++ EK+ +LDFH +NY++ R F TS FL I + ++ D +ST+ L+ SF+ F+E++L H+V+R P + GV +++ AI DYV YYRHF LYK I+T +V + QR + V+ P
Sbjct: 1 MTEAIVWKHATENELAKLATRHSVDDCKSALAEIFDLDFSD-------------------------EKQSFLLDFHLHNYSYPSPTIHGRHFQLNQTSVFLGICQTLMRRDF-ARESTTDLKSSFDYFQEILLTHSVNRSPKSVGVFSREEVTAIVDYVTN--SYYRHFQLYKCIYTPYYHVHLVQREINDVQTP 167
BLAST of mRNA_Ecto-sp8_S_contig11265.1627.1 vs. uniprot
Match: A0A8J2SIJ6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIJ6_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.270e-19 Identity = 48/125 (38.40%), Postives = 72/125 (57.60%), Query Frame = 1
Query: 409 EKERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELVLRHAVDRPPWTTGVLIPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEP 783
++ +V D++++ YAF K + FDA+ T LSI ++I D D TN + S+ KSF R E +LRHA RPP + D+ I +++ +Y+RH+ LYK IFT + + V Q P VE P
Sbjct: 73 QQREIVQDYYFHLYAFAKAKGFDAKKAGTLLSICREIFDADAATNAPSESMEKSFERLEAQLLRHAEFRPPKALDIFDEGDVQEIIEWML--HNYFRHYKLYKAIFTKRRSDVFSQAAPFAVEAP 195
BLAST of mRNA_Ecto-sp8_S_contig11265.1627.1 vs. uniprot
Match: A0A7S1Q3Y6_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1Q3Y6_ALECA) HSP 1 Score: 89.4 bits (220), Expect = 3.290e-17 Identity = 45/127 (35.43%), Postives = 77/127 (60.63%), Query Frame = 1
Query: 370 RIDDASARTNSLTEKERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELVLRHAVDRPPWTTGVLIPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVI 750
RID A + ++ D HY+NY+FC + F A TSTFLSIMK +L+E + + + ++ + F++ +L+H+V+RPPW+ GV D+ A+ DYV ++RH+ LY +++ T+ ++ I
Sbjct: 88 RIDQAEGL------RTEILADMHYHNYSFCTAQGFTAMKTSTFLSIMKLVLEEAISCRLTAA---EACDVFKDWLLKHSVERPPWSVGVFTYDDVKAVMDYV--HNTFFRHYRLYMYVYMTRCDLGI 203
BLAST of mRNA_Ecto-sp8_S_contig11265.1627.1 vs. uniprot
Match: T0R735_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R735_SAPDV) HSP 1 Score: 86.7 bits (213), Expect = 6.180e-17 Identity = 48/129 (37.21%), Postives = 74/129 (57.36%), Query Frame = 1
Query: 394 TNSLTEKERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDIL--------DEDMRTNDSTSSLRKSFNRFEELVLRHAVDRPPWTTGVLIPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQ 756
T+ +V+D + Y YAF K+ F A TST L+I+ ++ ++D+RT +L SF+RF+ ++LRH+V+RPP +TG+ D+ I DYV YYRHF LY+ IF + ++ I Q
Sbjct: 44 THKAPAPMHLVVDMYMYLYAFTKQHEFSAERTSTVLAIVHSLVLTDLFLHGEKDLRT---LPTLPASFSRFQAMLLRHSVERPPMSTGIFDAADVSRIVDYVT--HTYYRHFHLYQSIFLPQTHLSIVQ 167
BLAST of mRNA_Ecto-sp8_S_contig11265.1627.1 vs. uniprot
Match: A0A8C5E236_9TELE (Coiled-coil domain-containing protein 189-like n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5E236_9TELE) HSP 1 Score: 85.5 bits (210), Expect = 1.010e-16 Identity = 43/128 (33.59%), Postives = 74/128 (57.81%), Query Frame = 1
Query: 412 KERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELVLRHAVDRPPWTTGVLIPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEPPLAP 795
K V+L+ + + FC+E F TSTFLSI+K I D+ ++ + + +EL+L H+V RPP++ + P++I + +Y+ T Y++HF LYK++FT ++ + + + VEE PL P
Sbjct: 40 KRGVLLELYVQSVLFCREHNFSREQTSTFLSIIKSI--HDLNVETPFDNIEQCVSYCKELLLCHSVRRPPFSINLFGPEEIKCVFEYIYT--SYFKHFKLYKYVFTPEVKLDLSLTYSETVEEEPLQP 163 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11265.1627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11265.1627.1 >prot_Ecto-sp8_S_contig11265.1627.1 ID=prot_Ecto-sp8_S_contig11265.1627.1|Name=mRNA_Ecto-sp8_S_contig11265.1627.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=265bp MNQHPAVVGNAQLIPISYSTSTAGHTQCIPTASAGSQVYGYTEDTCSCRTback to top mRNA from alignment at Ecto-sp8_S_contig11265:2..4417- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11265.1627.1 ID=mRNA_Ecto-sp8_S_contig11265.1627.1|Name=mRNA_Ecto-sp8_S_contig11265.1627.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4416bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11265:2..4417- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11265:2..4417- >mRNA_Ecto-sp8_S_contig11265.1627.1 ID=mRNA_Ecto-sp8_S_contig11265.1627.1|Name=mRNA_Ecto-sp8_S_contig11265.1627.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=795bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11265:2..4417- (Ectocarpus species8 EcLAC_412)back to top |