mRNA_Ecto-sp8_S_contig1126.1621.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig1126.1621.1
Unique NamemRNA_Ecto-sp8_S_contig1126.1621.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig1126.1621.1 vs. uniprot
Match: D8LRG8_ECTSI (Poly (ADP-ribose) polymerase family, member 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG8_ECTSI)

HSP 1 Score: 840 bits (2170), Expect = 3.130e-301
Identity = 481/558 (86.20%), Postives = 487/558 (87.28%), Query Frame = 1 
Query:    1 CVCQDDVLVPATEAANGRLRPLSCNSVRAAVTTVLQCVKREAASASVLSSGDKGAEGGGRGXXXXXXXXRLAAEAVLAAIKEDPLGADLVLALLSMAVSSYRRDTVSTPFPKQLESPGGSKRAYAAFISCLEGIPSMLEMSRWTDAAQVLELPPVAVVALHFVLVLQPARLRNIASKNRARSAATASCGGRASSSCSASSGAGVAGLKARFPAAGLGDPSTASGRSGAXXXXXXXXXXXXXXXXASAQLGDVPTYAFEAVLPSDPAFDAQAELGGSKVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFAYRGDGSGTTVWPRSTFGDNHSASRPADLAAAAAXXXAHDXXTASGVAGTPDXXXXXXXXXXXXXXXXXXXXVSSSATNARYKRFRHRLVAKCRVLNGDGVKEIEGSGKEASYFVVSDASRVRVEAILLFHETQPSSQQHAAINSDSASVDRATTTISSGAGDSGKGRPRAARGRQSGAIESSGSDEDEGVSWIRGVRSLRGRLRGMLLEVVTFATLLWFLWYFWGVSPIS 1674
            C C+DDVLVPATEAANGRLRPLSCNSVRA VTTVLQCVKREAASASVLSSGDKGAEGGG          RLAAEAVLAAIKEDPLGADLVLALLSMAVSSYRRDTVSTPFPKQLESPGGSKRAYAAFISCLEGIPSMLEMSRWTDAAQVL+LPPVAVVALH VLVLQPARLRN+ASKNRARSAATASCG RASSS SASSGAGVAGLKARFPAAGLG PSTASGRSG         XXXXXXXXASAQLGDVPTYAFE VLPSDPAFDAQAELGGSKVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFAYRGDGSGTTVWPRSTF DNHSASRPA          AHD  TASGVAGTPD                    V+SSATNAR KRFRHRLVAKCRVLNGDGVKEIEGSGKEASYFVVSDASRVRVEAILLFHETQPSSQQHA INS  ASVDRATT ISSG GDSGKG  RAARGRQSGA ESSGSD+DEGVSW RGVRS+RG LRGMLLEVVTFATLLWFLWYFW VSPIS
Sbjct:   97 CFCEDDVLVPATEAANGRLRPLSCNSVRAVVTTVLQCVKREAASASVLSSGDKGAEGGG-----GAARARLAAEAVLAAIKEDPLGADLVLALLSMAVSSYRRDTVSTPFPKQLESPGGSKRAYAAFISCLEGIPSMLEMSRWTDAAQVLKLPPVAVVALHLVLVLQPARLRNLASKNRARSAATASCGARASSSWSASSGAGVAGLKARFPAAGLGVPSTASGRSG--------DXXXXXXXXASAQLGDVPTYAFEVVLPSDPAFDAQAELGGSKVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFAYRGDGSGTTVWPRSTFVDNHSASRPA---------VAHDVVTASGVAGTPDDTKGDSPAGAAATARSGSASVASSATNARCKRFRHRLVAKCRVLNGDGVKEIEGSGKEASYFVVSDASRVRVEAILLFHETQPSSQQHADINS--ASVDRATTAISSGVGDSGKGGSRAARGRQSGASESSGSDDDEGVSWSRGVRSVRGHLRGMLLEVVTFATLLWFLWYFWRVSPIS 630
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BLAST of mRNA_Ecto-sp8_S_contig1126.1621.1 vs. uniprot
Match: A0A6H5L4P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4P7_9PHAE)

HSP 1 Score: 771 bits (1990), Expect = 8.140e-274
Identity = 443/559 (79.25%), Postives = 463/559 (82.83%), Query Frame = 1 
Query:    1 CVCQDDVLVPATEAANGRLRPLSCNSVRAAVTTVLQCVKREAASASVLSSGDKGAEGGGRGXXXXXXXXRLAAEAVLAAIKEDPLGADLVLALLSMAVSSYRRDTVSTPFPKQLESPGGSKRAYAAFISCLEGIPSMLEMSRWTDAAQVLELPPVAVVALHFVLVLQPARLRNIASKNRARSAATASCGGRASSSCSASSGAGVAGLKARFPAAGLGDPSTASGRSGAXXXXXXXXXXXXXXXXASAQLGDVPTYAFEAVLPSDPAFDAQAELGGSKVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFAYRGDGSGTTVWPRSTFGDNHSASRPADLAAAAAXXXAHDXXTASGVAGTPDXXXXXXXXXXXXXXXXXXXXVSSSATNARYKRFRHRLVAKCRVLNGDGVKEIEGSGKEASYFVVSDASRVRVEAILLFHETQPSSQQHAAINSDSASVDRATTTISSGAGDSGKGRPRAARGRQSGAIESSGSDEDEGVSWIRGVRSLRGRLRGMLLEVVTFATLLWFLWYFWGVSPISI 1677
            C C+DDVLVPATEAANGRLRPLSCNSVRAAVTTVLQCVKREA SASVLSSGDKGAEGGG          RLAAEAVLAAIKEDPLGADLVLALLSMAVSSYRRDTVSTPFPKQLESPGGSKRAYAAFISCLEGIPSMLE +R     +VL+LPPVAVVALHFVLVLQPA+LRN ASKNRARSAATASCG +         GAGVAGLKARFPAAGLG+ STASGRSGA                AS QLGDVPTYAF+AVLP DPAFDAQAELGGS+VAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAA+FAYRGDGSGTTVWP STFGDNHSASR ADLAAA+A   A+D  +ASGVAGTP                     VSSSA+NARY RFRHRLVAKCRVLNGDGVKEIEGSGKEASYFVVSDASRVRVEAILLFHETQPSSQQHAAI S  ASVDRAT TISSG GDSGK RPRAARGR  GA ESSGSD++EGVSW RGVRS RG LR MLLE VTFA +LWF++ F  VSPI +
Sbjct:   97 CFCEDDVLVPATEAANGRLRPLSCNSVRAAVTTVLQCVKREAGSASVLSSGDKGAEGGGAARA------RLAAEAVLAAIKEDPLGADLVLALLSMAVSSYRRDTVSTPFPKQLESPGGSKRAYAAFISCLEGIPSMLEFAR-----KVLKLPPVAVVALHFVLVLQPAKLRNRASKNRARSAATASCGAKXXXXXXXXXGAGVAGLKARFPAAGLGNMSTASGRSGAGRGGDGVDGGG-----ASTQLGDVPTYAFDAVLPGDPAFDAQAELGGSEVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAASFAYRGDGSGTTVWPWSTFGDNHSASRLADLAAASAV--AYDVASASGVAGTPGDTRGDSPAGAVATARSGSVSVSSSASNARYNRFRHRLVAKCRVLNGDGVKEIEGSGKEASYFVVSDASRVRVEAILLFHETQPSSQQHAAIYS--ASVDRATATISSGVGDSGKERPRAARGRHRGASESSGSDDNEGVSWSRGVRSFRGHLRRMLLEAVTFAAVLWFIFCFCRVSPIPL 635
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BLAST of mRNA_Ecto-sp8_S_contig1126.1621.1 vs. uniprot
Match: W7TGY2_9STRA (Poly (Adp-ribose) polymerase member 8 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGY2_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 4.270e-12
Identity = 107/390 (27.44%), Postives = 149/390 (38.21%), Query Frame = 1 
Query:    1 CVCQDDVLVPATEAANGRLRPLSCNSVRAAVTTVLQCVKREAASASVLSSGDKGAEGGGRGXXXXXXXXRLAAEAVLAAIKEDPLGADLVLALLSMAVSSYRRDTVSTPFPKQL-ESPGGSKRAYAAFISCLEGIPSM-------------------LEMSRWTDAAQVLELPPVAVVALHFVLVLQPARLRNIASKNRARSAATASCGGRASSSCSASSGAGVAGLK-------------ARFPAAGLGDPSTASGRSGAXXXXXXXXXXXXXXXXASAQLG---DVPTYAFEAVLPSDPAFDAQAELGGSKVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFAYRGDGSGTTVWPRSTFGDNHSASRPA 1062
            C    D        AN  L+PL   S+  A+  +   VK EA   +V    D                 R  AE V+A ++E  L  DL L+LLSM  S  +  T+  P P+   ES GG        +S +  +P +                       R      V  LP  + + L ++L  +   L N      +  A      GR        +  GV G K             A    AGL  P   +   G                 ASA  G   D P + F      +  FDA A   G++  +HGSSP +FHSI++ GLR +SG+R M+NGA FG+G+Y++  C+ A  F   G      VW  S FG+  +AS  A
Sbjct:  173 CFSSTDAGAIVARRANEALQPLKEASLLQALCLLTALVKDEAG--AVWPENDP-------------CWRRAWAERVVARVREQGLAVDLRLSLLSM--SKAQSATLRPPVPRFFFESEGGYAVDRTVLVSAVNAVPPLHVICGGGGGRGXXXXXXXXXXXDRLEGVEAVESLPFPSCLVLQYLLFRERVTLMN------SSDAVAPGPRGRRGHEHDQGAAGGVEGGKEDEEWEGEKRQAHALDALAGLPSPGGPTPSQGGRETGLGPSGGPLRRFLASAFFGPRGDRPCFIFPLRHAPNARFDALARQHGTQWGFHGSSPGSFHSIVSWGLRSLSGTRGMRNGAAFGDGVYVASKCEVARNFGSWG----VPVWKHSQFGNRATASSAA 535
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1126.1621.1 vs. uniprot
Match: A0A8J4BR95_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BR95_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 1.030e-11
Identity = 83/278 (29.86%), Postives = 116/278 (41.73%), Query Frame = 1 
Query:  226 VLAAIKEDPLGADLVLALLSMAVSSYRRDTVSTPFPKQLESPGGS--KRAYAAFISCLEGIPSMLEMSRWTDAAQVLELPPVAVVALHFVLVLQPARLRNIASKNRARSAATASCGGRASSSCSASSGAGVAGLKARFPAAGLGDPSTASGRSGAXXXXXXXXXXXXXXXXASAQLGD-VPTYAFEAVLPSDPAFDAQAELGGSKVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFAYRGDGSGTTVWPRSTFGDNHSA 1050
            +LA +K  P G DL++  L  AV  +RR ++ TPFP ++  P  +   + + A    L+ +P +  +   +D A + +LPP A+  L ++L L PAR R                                     RF    L D        G                   A  G   P+Y  +A+  +     AQA    S +AYHG+  EN HSI++TGLR MSG+RL +NGA FG+GIYLS     A  F           W RS FG    A
Sbjct:    9 LLAEVKAYPDGTDLLITALYTAVDHFRRGSICTPFPSEVFPPVTTTGNKDFPALKRALDALPPVHVLL--SDEA-LAKLPPQALELLKWLL-LNPARQR-------------------------------------RFARMSLEDLIRQLRERGGDLAWLH-----------QALTGQKAPSYILQAMNTN-----AQAPFARSVIAYHGTRMENLHSIIHTGLRSMSGTRLQRNGANFGSGIYLSTRYDTALCFCEP-----YATWRRSRFGTKQRA 224
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BLAST of mRNA_Ecto-sp8_S_contig1126.1621.1 vs. uniprot
Match: A0A024TYT9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TYT9_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.980e-10
Identity = 42/80 (52.50%), Postives = 51/80 (63.75%), Query Frame = 1 
Query:  751 DVPTYAFEA--VLPSDPAFDAQAELGGSKVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFA 984
            D+P   F A  V  +DP FD QA   G+KV YHGS   +FHSIL  GL VMSG+R M +G +FG+GIY + S   AA FA
Sbjct:   38 DLPHVCFAARVVQSADPWFDCQAAKFGTKVCYHGSRMASFHSILQNGLHVMSGTRHMSSGNLFGDGIYFAESIHVAANFA 117
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BLAST of mRNA_Ecto-sp8_S_contig1126.1621.1 vs. uniprot
Match: A0A8J4GYX3_9CHLO (PARP catalytic domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GYX3_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 1.740e-9
Identity = 40/82 (48.78%), Postives = 47/82 (57.32%), Query Frame = 1 
Query:  805 AQAELGGSKVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFAYRGDGSGTTVWPRSTFGDNHSA 1050
            AQA    S +AYHG+  EN HSI++TGLR MSG+RL +NGA FG GIYLS     A +F           W RS FG    A
Sbjct:   41 AQAPFTSSAIAYHGTRMENLHSIIHTGLRSMSGTRLQRNGANFGPGIYLSTRYDTALSFCEP-----YATWHRSRFGTKQRA 117
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BLAST of mRNA_Ecto-sp8_S_contig1126.1621.1 vs. uniprot
Match: W4GJF1_9STRA (PARP catalytic domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GJF1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.950e-9
Identity = 44/94 (46.81%), Postives = 54/94 (57.45%), Query Frame = 1 
Query:  751 DVPTYAFEA--VLPSDPAFDAQAELGGSKVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFAYRGDGSGTTVWPRS 1026
            D+P   F A  V  ++P FD QA   G K+ YHGS   +FHSIL  GL VMSG+R M +G +FG+GIY + S   AA FA        T WP S
Sbjct:  252 DLPHVCFAATVVQTANPWFDRQAAKFGVKMCYHGSRLASFHSILQNGLHVMSGTRHMSSGNLFGDGIYFAESVHVAANFA----SPTPTTWPNS 341
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1126.1621.1 vs. uniprot
Match: A0A7S1HZD6_9EUGL (Poly [ADP-ribose] polymerase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HZD6_9EUGL)

HSP 1 Score: 70.1 bits (170), Expect = 2.280e-9
Identity = 43/95 (45.26%), Postives = 55/95 (57.89%), Query Frame = 1 
Query:  757 PTYAFEAVLPSDPA----FDAQAELGGSKVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFAYRGDGSGTTVWPRST 1029
            P YAFE V  S+ +    F A     G++ A+HGS+ EN+H I+NTGLR  SG+   K GA+FG GIYLS     AA F+  G+G     W  ST
Sbjct:  114 PNYAFELVHNSNSSTFQEFSALKAQYGAQTAFHGSTIENWHCIVNTGLRNFSGTEKQKTGALFGEGIYLSTMLSVAADFSRSGEG-----WSNST 203
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BLAST of mRNA_Ecto-sp8_S_contig1126.1621.1 vs. uniprot
Match: A0A1V9Y8I6_9STRA (PARP catalytic domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8I6_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.680e-9
Identity = 37/86 (43.02%), Postives = 54/86 (62.79%), Query Frame = 1 
Query:  772 EAVLPSDPAFDAQAELGGSKVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFAYRGDGSGTTVWPRST 1029
            + ++  +P FDA AE   + V YHGS   +FHSIL  GL++MSG+R M +G +FG+GIY + S + A  FA+   G+ +  W  ST
Sbjct:  205 QVIISPNPWFDALAEKHKTTVCYHGSKISHFHSILQNGLQIMSGTRHMGSGNIFGDGIYFAQSAQVAMNFAF---GAASQHWQHST 287
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BLAST of mRNA_Ecto-sp8_S_contig1126.1621.1 vs. uniprot
Match: A0A8J4FXG5_9CHLO (Uncharacterized protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FXG5_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 4.610e-9
Identity = 40/82 (48.78%), Postives = 47/82 (57.32%), Query Frame = 1 
Query:  805 AQAELGGSKVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFAYRGDGSGTTVWPRSTFGDNHSA 1050
            AQA    S +AYHG+  EN HSI++TGLR MSG+RL +NGA FG GIYLS     A +F           W RS FG    A
Sbjct:  173 AQAPFTSSAIAYHGTRMENLHSIIHTGLRSMSGTRLQRNGANFGPGIYLSTRYDTALSFCEP-----YATWHRSRFGTKQRA 249
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1126.1621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRG8_ECTSI3.130e-30186.20Poly (ADP-ribose) polymerase family, member 8 n=1 ... [more]
A0A6H5L4P7_9PHAE8.140e-27479.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TGY2_9STRA4.270e-1227.44Poly (Adp-ribose) polymerase member 8 n=2 Tax=Mono... [more]
A0A8J4BR95_9CHLO1.030e-1129.86Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A024TYT9_9STRA3.980e-1052.50Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A8J4GYX3_9CHLO1.740e-948.78PARP catalytic domain-containing protein n=1 Tax=V... [more]
W4GJF1_9STRA1.950e-946.81PARP catalytic domain-containing protein n=1 Tax=A... [more]
A0A7S1HZD6_9EUGL2.280e-945.26Poly [ADP-ribose] polymerase n=1 Tax=Eutreptiella ... [more]
A0A1V9Y8I6_9STRA2.680e-943.02PARP catalytic domain-containing protein n=1 Tax=T... [more]
A0A8J4FXG5_9CHLO4.610e-948.78Uncharacterized protein n=2 Tax=Volvox reticulifer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1126contigEcto-sp8_S_contig1126:11555..16447 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score75.5
Seed ortholog evalue7.4e-11
Seed eggNOG ortholog157072.XP_008871739.1
Model size1806
KEGG koko:K16465,ko:K16466
KEGG TC1.I.1
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.Ca2 -binding protein (EF-Hand superfamily
EggNOG OGsCOG5126@1,KOG0028@2759
Ec32 ortholog descriptionPoly(ADP-ribose) polymerase, catalytic domain
Ec32 orthologEc-18_004480.1
Cds size1395
COG Functional cat.DTZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03019,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1126.1621.1prot_Ecto-sp8_S_contig1126.1621.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig1126 11681..15871 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143204.8393276-UTR-Ecto-sp8_S_contig1126:11554..116801681143204.8393276-UTR-Ecto-sp8_S_contig1126:11554..11680Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig1126 11555..11680 -
1681143204.924547-UTR-Ecto-sp8_S_contig1126:15871..159601681143204.924547-UTR-Ecto-sp8_S_contig1126:15871..15960Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig1126 15872..15960 -
1681143204.9334702-UTR-Ecto-sp8_S_contig1126:16251..164471681143204.9334702-UTR-Ecto-sp8_S_contig1126:16251..16447Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig1126 16252..16447 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143204.853434-CDS-Ecto-sp8_S_contig1126:11680..120701681143204.853434-CDS-Ecto-sp8_S_contig1126:11680..12070Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1126 11681..12070 -
1681143204.8671708-CDS-Ecto-sp8_S_contig1126:12861..132071681143204.8671708-CDS-Ecto-sp8_S_contig1126:12861..13207Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1126 12862..13207 -
1681143204.8795877-CDS-Ecto-sp8_S_contig1126:13632..137661681143204.8795877-CDS-Ecto-sp8_S_contig1126:13632..13766Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1126 13633..13766 -
1681143204.8941789-CDS-Ecto-sp8_S_contig1126:14246..146391681143204.8941789-CDS-Ecto-sp8_S_contig1126:14246..14639Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1126 14247..14639 -
1681143204.9059803-CDS-Ecto-sp8_S_contig1126:15201..153131681143204.9059803-CDS-Ecto-sp8_S_contig1126:15201..15313Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1126 15202..15313 -
1681143204.9152267-CDS-Ecto-sp8_S_contig1126:15851..158711681143204.9152267-CDS-Ecto-sp8_S_contig1126:15851..15871Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1126 15852..15871 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig1126.1621.1

>prot_Ecto-sp8_S_contig1126.1621.1 ID=prot_Ecto-sp8_S_contig1126.1621.1|Name=mRNA_Ecto-sp8_S_contig1126.1621.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=465bp
MAVSSYRRDTVSTPFPKQLESPGGSKRAYAAFISCLEGIPSMLEMSRWTD
AAQVLELPPVAVVALHFVLVLQPARLRNIASKNRARSAATASCGGRASSS
CSASSGAGVAGLKARFPAAGLGDPSTASGRSGAGRGGAGGDGDGGDGGGA
SAQLGDVPTYAFEAVLPSDPAFDAQAELGGSKVAYHGSSPENFHSILNTG
LRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFAYRGDGSGTTVWPRSTFG
DNHSASRPADLAAAAAAAVAHDVATASGVAGTPDDTRGDSRAGAAATARS
DSASVSSSATNARYKRFRHRLVAKCRVLNGDGVKEIEGSGKEASYFVVSD
ASRVRVEAILLFHETQPSSQQHAAINSDSASVDRATTTISSGAGDSGKGR
PRAARGRQSGAIESSGSDEDEGVSWIRGVRSLRGRLRGMLLEVVTFATLL
WFLWYFWGVSPISI*
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mRNA from alignment at Ecto-sp8_S_contig1126:11555..16447-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig1126.1621.1 ID=mRNA_Ecto-sp8_S_contig1126.1621.1|Name=mRNA_Ecto-sp8_S_contig1126.1621.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4893bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1126:11555..16447- (Ectocarpus species8 EcLAC_412)
TGTGTTTGCCAGGATGATGTTCTGGTGCCCGCGACGGAGGCTGCCAACGG
GCGCCTCCGCCCGCTCTCGTGCAACTCCGTCCGTGCGGCAGTCACCACGG
TTCTCCAGTGCGTGAAGCGGGAGGCGGCTTCAGCATCCGTCCTAAGCTCG
GGCGACAAGGGCGCAGAAGGAGGAGGACGAGGAGAAGGAGGAGGAGGTAT
GCGTAAACGCACGCTGTACATGCAGGCATCCTCATTCCTGTACGTTGGTT
CTTCGTGTGTTGTCGGCGATCAGACACAACAGCTCGACAAGATGGATAGA
TGGAATTACTAGGTCCCCCCGCCACCCCAGGGAGGACCCCATCCCAACCC
CAACCACCACAAACAGACAGTCACACAAGATTGTGTTGAGATCTTTCACA
ACCGAAAAATCAACCATCTGCGTGGCAAGTAATAGTAAACTGACACTGCT
GTATCGTATTCCCGGCCTCACTACCGACCCGCAGGAGCGGCGCGAGCTCG
GTTGGCCGCTGAGGCAGTGCTAGCGGCGATAAAGGAGGACCCTCTCGGTG
CGGACCTCGTTCTCGCGCTCCTGAGCATGGCAGTCTCTTCCTACAGGTGC
AAGCAAAGAAATAAATAGAGTAGCTGTATGTAATACATAGCTGGTTGGGT
GTTTACCGCTTGAAGGGAGGCGTTGTCCTGGTGCCGCCTTGGGGAGTTGT
CCTGATGCCGCCTTGAGGCGTCGTCCTGATGCCGTCTTGGCTGCCTGTTG
GCAACTAGCCACATCTCTCATCCTTGGTGTGCAGTATTTCTTCAGCTCCG
GTGTTGAGCGTGATTCAGCTCTTTGCCCCGGAGTATCTCGATTTTTTTTT
AACCTGGGAATCGTGGCTCCGGTATCCTTCCTCCTTGCCGCCCCCCCTCC
CGCCCCCTTAGCCGGGATGCCCAACCCACGGCACAATTGGTTTAGCACAG
CAGATGCGAGAATAATGACCAGCTCCTGATTCATCCTTTTGAAACGCATC
TAGCCTGGACCGGCGAAAACCCGGCATATCGCTCCGTCCCGGTATTGTAG
GGATGCGAGGTCAATAAGGTAACGACGACGGCATGCGCTTTCATGAGTAC
GCCCCCCCCCCCCCCTTTGATCTCTCCGAAACAGACGAGACACGGTGTCG
ACGCCGTTCCCCAAACAGTTGGAGTCACCGGGCGGCTCGAAACGCGCGTA
CGCTGCCTTCATTTCGTGCTTGGAGGGCATCCCCAGCATGCTGGAGGTGG
GCCCTAGTCTTTCGCCGTGTCATGAAGATGAAGATGTCCTCGTCGTTGAC
AGTAACGGTCATATTCTACTATTTAATGATACTTATGATGTTTCTCATGC
TCCGGGTGGAGACAGATGGTCAGAAGGGGCGGAGACAGGTGTAACCTAGG
GGAGAAGACAGGTATTAACTAGGGGAGAAGACAGAGAGATGGCAACATGA
CCCTCCTGATTTTCTGGTGCACATAGCGCTATTGTACCTTGGTTTCCTTT
GCCTTCTGTAGCGCTACTTTTTTTCACCTTGTTTTCTTGTGCATGAGCGC
TACGGAGATCTGGCGACCAGTGAGCCATGCTGGCGACGGAGATCTGGCGG
GGCATCTATTGCCCTCACCGGCGATTTTGTTGCAGTTCGCCCGCAAGGTA
GAAACAATCACCAACCCGCCCCCGATAACGCCTCACAGACCTGGACCTCC
CCCACCCCAGCGACGCCCGCCTTCCCTCTTTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTGTCTGTCTCGCTCTCTGTCTCTTATGTGTGTTA
ACGCACAGATGTCAAGGTGGACGGATGCAGCACAGGTGTTGGAACTTCCC
CCGGTAGCCGTCGTCGCCCTACACTTCGTGCTGGTGCTTCAGCCGGCGCG
GCTGCGCAATATTGCATCGAAGAATCGCGCTCGGTCTGCGGCGACAGCGA
GCTGCGGTGGCAGGGCCTCGTCGAGTTGTTCCGCGTCCTCCGGCGCGGGC
GTCGCCGGGTTAAAAGCGCGCTTTCCCGCCGCTGGTTTGGGGGATCCGTC
GACTGCAAGCGGTAGGAGTGGTGCCGGACGGGGTGGGGCAGGTGGGGACG
GTGATGGTGGTGATGGTGGTGGTGCGTCTGCCCAGCTTGGCGACGTGCCG
ACGTATGCCTTTGAGGCCGTGCTGCCCAGCGATCCCGCTTTCGACGCCCA
GGTTCGTCTGCTTGTTTCTGTTTCTCGTGTTTGCGGGCTGTTGGTGCTAT
TGCTAATGGTGTTGTTGGTGCTGATGATGATGTCAGGGGAATGTTTTGAT
TTCGTGGCGAGTGCAGCCGCTACGTTAGGTACGCTGGTTTTACGCGTACC
GAAGCCCAGCATACGTTTTTCGTCGACCCGTGCGCTTGCGGATTGCCCGA
CACCAGTAGCAGCAGCGATAGCAATACAATACCTTGGTTGAGGCTTGGCG
CCCCCCGACGCGAAGCACAGACTCACAAGCGCTCGGCTGGAGAACATGAC
AATGCCCACGCCCGCCCTCGCGCGCACTCCAAATCTCGCCCACCCCTCGG
GGTTGTTTCTGCTGCTGCCGTCACCGTAACGCCACGGCGGTTTTATCGCC
TTCCGACGACCACAACACCCGAACAACAACAAAAACAACAACAACAACAA
CAACAACAAAATACGACGATGACGACGACAGGCAGAGCTGGGGGGGTCCA
AGGTCGCGTACCACGGCTCGAGCCCCGAGAATTTCCACTCCATCCTCAAC
ACCGGGCTCCGCGTGATGAGCGGCAGCAGGCTCATGAAGAACGGCGCGGT
GTTCGGAAACGGAATGTGAGATGATGAAGGATTCTCTACTCGCGCGTTCG
CGTACCACGTTTCGTCAATTAATTCCAAGGGTTTTCTCGGTAACGGTGTT
TTTCGGCGGTACAATAATGCCATTCGGCGGTAATTGTTTCTGACGGTAGG
CGGTAATGCGTTCGGTGACGAATTTGGCGGTGGCGGTAAAACTTAAGAAA
CGACGGTCAAACGGCGGATTACCGGTACCACCCACCACGGCGGTAATATT
TCCGGAAACGCCGAGGCTTTTCTCCAGCGCCACGTATACAACAACCCTGC
TGTGACGCACCACTGTGTATCCTTGCCGTTTTTTTTCGAACGGTTGCGAC
TAACCTCGCCCCCCCCTCTGAATCATGATGCTGTGTATTCACGGTGCATC
TCTGGGTGCGGCTGGCTCGGCTGGGGCGATGAAACCGAAGTTACCTCTCG
GGGAGCTGCAAGGCGGCCGCTACCTTCGCCTATCGCGGGGACGGTAGCGG
GACTACCGTGTGGCCACGGAGCACTTTCGGAGACAATCACTCCGCATCTC
GTCCTGCTGACCTCGCCGCCGCCGCCGCCGCCGCCGTAGCACATGATGTC
GCTACCGCTTCTGGTGTTGCTGGCACTCCTGACGATACGAGAGGCGACTC
CCGTGCTGGTGCTGCTGCTACTGCTAGGAGCGACAGTGCTTCGGTTTCTT
CCTCGGCTACAAACGCCCGGTACAAGAGGTTTCGACACCGTCTGGTGGCG
AAGTGTCGCGTCCTGAACGGCGACGGGGTCAAGGAGGTGAGCCAGACGTG
CTGACTAATCTTGTTCTTAGCTTTCATTGGCTGGGTATCATCTTGAGCGG
CCTTGGCGTTGGCGGGGCTGAGGGGGGGATCCATGGGAGAAGCTTTGAAC
GAGAAATGGTCTTGATTTCCGTTGTTATGTTCCACGCCAACGCCCACGCC
GCCCACGTCCCCCCTGTTTTCTTTCTTACCAATCACGCAAGATATTCTGG
GGCAGAGTATCTTCAACAGTTCCCGTCCAGCGTGTTGGAAAAAAACGTTT
TTTTTGGGCGGAATCTTTCCCCTCGATGTGACACTAGCGCCACCGCGGTC
GCTAAGAAAGTCTCAGGGTACTCACGATTTTCCGCTGATGCGCTCGTGTA
GCGTTGTCTATGTAAGGTCACAAGTTTTAGCCGCCGACACCGGAACAGCA
ATTTAATATTGCTTGCAAGCGTTGGCGGATGCTAGGTCCGACATGATCAC
AACCAGTCAAGGGTATTGTTCGCTGTGTTGCACCCCCCTGCTACGCGTCG
CGGATACAGCGTCCAACAGAATGTTTCTTCTTCTTGTGTTTTCTCAAAAA
GAAAGAGGTTTCTCCAGCGGCTGGGGTAATCTCTCATTCTCACCTATTCA
AGTGGCCTTGCCAGATGTAAACCACGCCTGGTGGTGCGTGCTCTCAATCG
GAGTTCACTGCGAGCATTCTTACGGTGTAGGTCGTAGAATGCAGATGTGT
AGATGTGCGGTGGCCGGGAGTTATCGTTCTCCGAAAGCGCCCCCGCCGTG
CCCTTGCCGTTCCTGCTGCCCGGGCAGATCGAAGGCAGCGGCAAGGAGGC
GAGCTACTTCGTCGTGTCGGACGCGTCCCGGGTGCGCGTGGAGGCCATCC
TTCTCTTCCACGAGACCCAGCCGTCGTCCCAGCAACACGCCGCTATTAAT
AGTGATAGTGCCTCCGTCGACCGTGCCACCACAACCATTAGCAGCGGTGC
TGGCGACAGCGGGAAGGGGAGGCCGCGAGCAGCGCGGGGTAGGCAGAGCG
GGGCGATCGAGAGCAGCGGCAGCGACGAGGACGAGGGGGTGTCTTGGATC
CGGGGGGTGCGTAGCTTGAGGGGTCGCCTGCGCGGAATGCTGTTGGAGGT
GGTGACTTTCGCGACGCTATTGTGGTTTTTATGGTATTTTTGGGGGGTCT
CTCCGATTTCAATCTGAAGCCCAGCTAGTGGCTCCTGCAGCCGGGGAAGC
GTTGCCAGCGGTTTCGCGATTCGTGTGTGTTGTGAGTGATGAGTGATGAA
CGTTGTGTCGTTGCCGCCGTGGCGAGCGCACTTGCTGTGTGTC
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1126:11555..16447-

>mRNA_Ecto-sp8_S_contig1126.1621.1 ID=mRNA_Ecto-sp8_S_contig1126.1621.1|Name=mRNA_Ecto-sp8_S_contig1126.1621.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1395bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1126:11555..16447- (Ectocarpus species8 EcLAC_412)
ATGGCAGTCTCTTCCTACAGACGAGACACGGTGTCGACGCCGTTCCCCAA
ACAGTTGGAGTCACCGGGCGGCTCGAAACGCGCGTACGCTGCCTTCATTT
CGTGCTTGGAGGGCATCCCCAGCATGCTGGAGATGTCAAGGTGGACGGAT
GCAGCACAGGTGTTGGAACTTCCCCCGGTAGCCGTCGTCGCCCTACACTT
CGTGCTGGTGCTTCAGCCGGCGCGGCTGCGCAATATTGCATCGAAGAATC
GCGCTCGGTCTGCGGCGACAGCGAGCTGCGGTGGCAGGGCCTCGTCGAGT
TGTTCCGCGTCCTCCGGCGCGGGCGTCGCCGGGTTAAAAGCGCGCTTTCC
CGCCGCTGGTTTGGGGGATCCGTCGACTGCAAGCGGTAGGAGTGGTGCCG
GACGGGGTGGGGCAGGTGGGGACGGTGATGGTGGTGATGGTGGTGGTGCG
TCTGCCCAGCTTGGCGACGTGCCGACGTATGCCTTTGAGGCCGTGCTGCC
CAGCGATCCCGCTTTCGACGCCCAGGCAGAGCTGGGGGGGTCCAAGGTCG
CGTACCACGGCTCGAGCCCCGAGAATTTCCACTCCATCCTCAACACCGGG
CTCCGCGTGATGAGCGGCAGCAGGCTCATGAAGAACGGCGCGGTGTTCGG
AAACGGAATTTACCTCTCGGGGAGCTGCAAGGCGGCCGCTACCTTCGCCT
ATCGCGGGGACGGTAGCGGGACTACCGTGTGGCCACGGAGCACTTTCGGA
GACAATCACTCCGCATCTCGTCCTGCTGACCTCGCCGCCGCCGCCGCCGC
CGCCGTAGCACATGATGTCGCTACCGCTTCTGGTGTTGCTGGCACTCCTG
ACGATACGAGAGGCGACTCCCGTGCTGGTGCTGCTGCTACTGCTAGGAGC
GACAGTGCTTCGGTTTCTTCCTCGGCTACAAACGCCCGGTACAAGAGGTT
TCGACACCGTCTGGTGGCGAAGTGTCGCGTCCTGAACGGCGACGGGGTCA
AGGAGATCGAAGGCAGCGGCAAGGAGGCGAGCTACTTCGTCGTGTCGGAC
GCGTCCCGGGTGCGCGTGGAGGCCATCCTTCTCTTCCACGAGACCCAGCC
GTCGTCCCAGCAACACGCCGCTATTAATAGTGATAGTGCCTCCGTCGACC
GTGCCACCACAACCATTAGCAGCGGTGCTGGCGACAGCGGGAAGGGGAGG
CCGCGAGCAGCGCGGGGTAGGCAGAGCGGGGCGATCGAGAGCAGCGGCAG
CGACGAGGACGAGGGGGTGTCTTGGATCCGGGGGGTGCGTAGCTTGAGGG
GTCGCCTGCGCGGAATGCTGTTGGAGGTGGTGACTTTCGCGACGCTATTG
TGGTTTTTATGGTATTTTTGGGGGGTCTCTCCGATTTCAATCTGA
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