mRNA_Ecto-sp8_S_contig11250.1610.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11250.1610.1 vs. uniprot
Match: D7G6Z3_ECTSI (DNA ligase IV n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z3_ECTSI) HSP 1 Score: 836 bits (2159), Expect = 3.770e-296 Identity = 404/415 (97.35%), Postives = 408/415 (98.31%), Query Frame = 1
Query: 4 RNNSLRRVCSAFIGKHSSVTATFNLEVFTTFSPMLAMNFFYGLGKIVPSLQGRPFCMDVKLDGERMLCHREGNKVKWFTRNAKDYTDKYGAALTPHIVGGVSAHKCVLDGEVVTWDDNTGSMVPFGSNRTYAKEELEGRGSGTRWLFYVVFDVLYAEGSGGGLEDGGTMDEVVRDAVRNSIAPCPPPTEVQAGNLTALPLDVRRKVLRSIVTENEHRLEFVKSWEVPAGDEVERKKQLDECFEQRAIHLNEEGLVVKDLHGHYMIGDKSKKTPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVGVAVPNEDGQPRKEYYPLARVGTGYSINELEDLNELLKDKWKSFDTSDPTHFDPHRAGVKKSSRDGVPLTKWIAAEDSVCLQVKCMEIVKASDWPGVFCTMR 1248
R SLRRVCSAFIGKHSSVTATFNLEVFTTFSPMLAMNFFYGLGKIVPSLQGRPFCMDVKLDGERMLCHREGNKVKWFTRNAKDYTDKYGAALTPHIVGGVSAHKCVLDGEVVTWDDNTGSMVPFGSNRTYAKEELEGRG GTRWLFYVVFDVLYAEGSGGGLEDGGTM+E+VR+AVRNSIAPCPPPTEVQAGNLTALPLDVRRKVLRSIVTENEHRLEFVKSWEV AGDEVERKKQLDECFEQRAIHLNEEGLVVKDLHGHYMIGDKSKK PLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVGVAVPNED QPRKEYYPLARVGTGYSINELEDLNELLKDKWKSFDTSDPTHFDPHR G+KKSSRDGVPLTKWIAAEDSVCLQVKCMEIVKASDWPGVFCTMR
Sbjct: 230 RTTSLRRVCSAFIGKHSSVTATFNLEVFTTFSPMLAMNFFYGLGKIVPSLQGRPFCMDVKLDGERMLCHREGNKVKWFTRNAKDYTDKYGAALTPHIVGGVSAHKCVLDGEVVTWDDNTGSMVPFGSNRTYAKEELEGRGGGTRWLFYVVFDVLYAEGSGGGLEDGGTMEEIVREAVRNSIAPCPPPTEVQAGNLTALPLDVRRKVLRSIVTENEHRLEFVKSWEVSAGDEVERKKQLDECFEQRAIHLNEEGLVVKDLHGHYMIGDKSKKIPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVGVAVPNEDRQPRKEYYPLARVGTGYSINELEDLNELLKDKWKSFDTSDPTHFDPHRTGIKKSSRDGVPLTKWIAAEDSVCLQVKCMEIVKASDWPGVFCTMR 644
BLAST of mRNA_Ecto-sp8_S_contig11250.1610.1 vs. uniprot
Match: A0A6H5KP03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP03_9PHAE) HSP 1 Score: 558 bits (1437), Expect = 1.860e-191 Identity = 271/294 (92.18%), Postives = 281/294 (95.58%), Query Frame = 1
Query: 367 MVPFGSNRTYAKEELEGRGSGTRWLFYVVFDVLYAEGSGGGLEDGGTMDEVVRDAVRNSIAPCPPPTEVQAGNLTALPLDVRRKVLRSIVTENEHRLEFVKSWEVPAGDEVERKKQLDECFEQRAIHLNEEGLVVKDLHGHYMIGDKSKKTPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVGVAVPNEDGQPRKEYYPLARVGTGYSINELEDLNELLKDKWKSFDTSDPTHFDPHRAGVKKSSRDGVPLTKWIAAEDSVCLQVKCMEIVKASDWPGVFCTMR 1248
MVPFGSNRTYAKEELEGRG GTRWLFYVVFDVLYAEGSGGGLEDGGTMDE+VRDAV++SIAPCPP +EVQAGNLTALPLDVRR VLRSIVTENEHRLEFVKSWEVPAGDEVERKKQLDECFEQRAIHLNEEGLVVKDLHGHYM+ TPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSG+LSKFLVGVAVPNEDGQPRKE+YPLARVGTGYSINELEDLNELLKDKWKSFDTS PTHF+ HR +KK+SRDGVPLTKWIAAEDSVCLQVKCMEIVKASDWPGVFCTMR
Sbjct: 1 MVPFGSNRTYAKEELEGRGGGTRWLFYVVFDVLYAEGSGGGLEDGGTMDEIVRDAVKSSIAPCPPRSEVQAGNLTALPLDVRRTVLRSIVTENEHRLEFVKSWEVPAGDEVERKKQLDECFEQRAIHLNEEGLVVKDLHGHYMVN-----TPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGMLSKFLVGVAVPNEDGQPRKEFYPLARVGTGYSINELEDLNELLKDKWKSFDTSAPTHFNAHRTVIKKASRDGVPLTKWIAAEDSVCLQVKCMEIVKASDWPGVFCTMR 289
BLAST of mRNA_Ecto-sp8_S_contig11250.1610.1 vs. uniprot
Match: A0A836CLE3_9STRA (DNA ligase IV n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLE3_9STRA) HSP 1 Score: 252 bits (643), Expect = 7.580e-71 Identity = 170/485 (35.05%), Postives = 239/485 (49.28%), Query Frame = 1
Query: 1 SRNNSLRRVCSAFIG----------KHSSVTATFNLEVFTTFSPMLAMNFFYGLGKIVPSLQGRPFCMDVKLDGERMLCHREGNKVKWFTRNAKDYTDKYGAALTPHIVGGVSAHKCVLDGEVVTWDDNTGSMVPFGSNRTYAKEELEGRGSGT-----RWLFYVVFDVLYAEGSGGG----LEDGGTMDEVVRDAVRNSIAPCPPPTE----------------------VQAGNLTALPLDVRRKVLRSIVTENEHRLEFVKSWEVPAGDEVERKKQLDECFEQRAIHLNEEGLVVKDLHGHYMIGDKSKKTPL-------------WIKMKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVGVAVPNEDGQPRKE---YYPLARVGTGYSINELEDLNELLKDKWKSFDTSDPTHFDPHRAGVKK----------SSRDGV--PLTKW----IAAEDSVCLQVKCMEIVKASDWPGVF 1236
SR N LR VC F +H++ T LEV T F+PMLA N IVPS +G PF M+VKLDGERML H++G+ V+++TR DYTDKYG +TP I+ V+AH+C+LDGE+++WD + MV FG NRT A+ E GSG +WL Y +FD++Y G + + E +A R PPP + G+LT LPL VRR+ L ++ + E V + L+E FE AI EEGLVVKDL Y++G+K T WIKMKP+Y+DQT+ MD++++ F G R G +S F++ V +E G + Y VG+GY++ EL+D+N+ LKDKW F++ F P V +S DGV P ++ + DS+ L+VKC E ++ + F
Sbjct: 262 SRTNDLRHVCGKFAAAAGAADAAGQRHAAAT----LEVGTPFAPMLAHNPKNDFASIVPSFKGAPFLMEVKLDGERMLAHKDGDAVRFYTRRGTDYTDKYGPVMTPFILSQVTAHRCILDGEMMSWDADMKRMVAFGCNRTSARLEALANGSGAAAGVRQWLCYSIFDIVYLGAEQGADAAASPEAAALHEAAAEAAREDGVGAPPPPRGALLPSPAKAGSAAAGAVTPAAARLGDLTELPLAVRRRALTRVIGQGE----------VVRARDGAAAAALEEFFELHAIARGEEGLVVKDLTAPYLLGEKGATTKARGEALDQGRAAKRWIKMKPDYADQTQPMDVVVVGGTFGAGG-RGGGVSSFIMAVRGGDEGGDGGDDACLMYTCGCVGSGYNLQELKDINDHLKDKW--FESDKSKKFVPAVCVVVPGACGAAVPFLASVDGVMCPTHRYPDLFVHPRDSIVLEVKCAEYPSSTVYSAGF 729
BLAST of mRNA_Ecto-sp8_S_contig11250.1610.1 vs. uniprot
Match: A0A7S3XL94_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL94_HETAK) HSP 1 Score: 227 bits (578), Expect = 2.580e-63 Identity = 141/349 (40.40%), Postives = 196/349 (56.16%), Query Frame = 1
Query: 226 VKWFTRNAKDYTDKYGAALTPHIVGGVSAHKCVLDGEVVTWDDNTGSMVPFGSNRTYAKEELEGRGSGTRWLFYVVFDVLYAEGSGGGLEDGGTMDEVVRDAVRNSIAPCPPPTEVQAGNLTALPLDVRRKVLRSIVT-ENEHRLEFVKSWEVPA--GDEVERKKQLDECFEQR----------AIHLNEEGLVVKDLHGHYMIGDKSKKTPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVGVAVPNE---DGQPRKEYYPLARVGTGYSINELEDLNELLKDKWKSFDTSDPTHFDPHRAGVKKSSRDGVPLTKWIAAEDSVCLQVKCMEIVKASDW 1224
++W+TRN K + YG + I V+A +LDGE+ WD+ G M PF SN+T A++E R LFY++FDVLY G G EV+ P ++AG+LTA PL +RR+ LR+++ E HRLE EVPA G E + Q ++R A+ EEGLVVKDL Y+ G+ SKKT WIKMKPEYSDQT ++DL++L A ++ G+ R+GLLS FL+G+A DG+P K ++ +VGTGYS+ ELEDLN L+D + +F+ P + H + K RD +P KWI SV +VKC EIV ++ +
Sbjct: 1 MEWWTRNIKKAPETYGFRMEKFIKEAVAAECVILDGEIAVWDNELGEMAPFRSNKTVAQKEDH------RQLFYILFDVLYLAGEGAA--------EVLG------------PLGLRAGSLTAAPLRLRRRALRALLRKETPHRLELCHGLEVPALIGLEKNKNAQATATSQERRDKLLDYYTKAVEGKEEGLVVKDLESRYVTGNSSKKTNHWIKMKPEYSDQTTNLDLVVLGAYYSEGRRRAGLLSHFLLGLADGRSAGGDGRPTK-FFTFGKVGTGYSLKELEDLNAKLEDHFVTFNPHKPPPVEWHPWKIGK--RDDIP-NKWIPPNKSVIFEVKCAEIVDSNQF 319
BLAST of mRNA_Ecto-sp8_S_contig11250.1610.1 vs. uniprot
Match: A0A662X6F6_9STRA (DNA ligase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6F6_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.290e-58 Identity = 137/410 (33.41%), Postives = 213/410 (51.95%), Query Frame = 1
Query: 10 NSLRRVCSAFIGKHSSVTATFNLEVFTTFSPMLAMNFFYGLGKIVPSLQGRPFCMDVKLDGERMLCHREGNKVKWFTRNAKDYTDKYGAALTPHIVGG-VSAHKCVLDGEVVTWDDNTGSMVPFGSNRTYAKEELEGRGSGTRWLFYVVFDVLYAEGSGGGLEDGGTMDEVVRDAVRNSIAPCPPPTEVQAGNLTALPLDVRRKVLRSIVTENEHRLEFVKSWEVPAGDEVERKKQLDECFEQRAIHLNEEGLVVKDLHGHYMIGDKSKKTPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVGVAVPNED----------GQPRKEYYPLARVGTGYSINELEDLNELLKDKWKSFDTSDPTHFDPHRAGVKKSSRDGVPLTKWIAAEDSVCLQVKCMEI 1206
N L +VC+ ++S+V LE F FSPMLA G G+ ++ F M+ KLDGER+ CH +G +V++ +RN +YT+ YG ++ P+++ VS C+LDGE++ WD+ + FG + A G + RWL YVV+DV+Y G G + ++R+ + P EV A + LPL RRK+L ++T +HR+ ++ V + ER L R + EG+++KDL+ HYM G+ S+KT W+K+KP+Y+ T ++D LI+ + G+ RSG +S FL+GV + D G P Y A+VGTGY++ ELE + + L+ W+ +D+ + PH K D P WI S L+V E+
Sbjct: 223 NDLHKVCTDL--RNSAVRYVPQLEPFQVFSPMLAKR--VGFGECTTAINADAFVMEPKLDGERITCHVQGKQVQFISRNGINYTENYGPSMAPYVLSQLVSGVDCILDGEMMVWDNLEYRLREFGLLKNVANAVRNGEAT-HRWLCYVVWDVVYLGG-------GPQAERLIREVYKG-------PGEVSA--VMGLPLQARRKLLLRVLTPLDHRIVIIEQTLVNSKSPKERH-DLVMAEVDRQVSNGGEGVILKDLNAHYMCGESSRKTKKWLKLKPDYAGMTTNLDALIIGGFYGTGRRRSGNVSVFLLGVLAQSLDEHSAAEAMKPGAPCPIVYTFAKVGTGYNLEELEQMRQELEPHWQPWDSD---NVPPHLNDWKPQKSDLKP-DVWIDPRHSKILEVYGFEL 606
BLAST of mRNA_Ecto-sp8_S_contig11250.1610.1 vs. uniprot
Match: A0A4D9CSH9_9STRA (DNA_LIGASE_A3 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH9_9STRA) HSP 1 Score: 208 bits (529), Expect = 6.130e-58 Identity = 112/294 (38.10%), Postives = 171/294 (58.16%), Query Frame = 1
Query: 16 LRRVCSAFIGKHSSVTA-TFNLEVFTTFSPMLAMNFFYGLGKIVPSLQGRPFCMDVKLDGERMLCHREGNKVKWFTRNAKDYTDKYGAALTPHIVGGVSAHKCVLDGEVVTWDDNTGSMVPFGSNRTYAKEELEGRGSGTRWLFYVVFDVLYAEGSGGGLE---DGGTMDEVVRDAVRNSIAPCPPPTEVQAGNLTALPLDVRRKVLRSIVTENEHRLEFVKSWEVPAGDEVERKKQLDECFEQRAIHLNEEGLVVKDLHGHYMIGDKSKKTPLWIKMKPEYSDQTEDMDLLIL 885
LR VCSA + +++ F+PMLA + L K+ P++ G PF +++K+DGERMLCH++G +V+WF+R+A DYTDKYG LTPH++ V +C+LDGEVV WD + + F NR+ ++ R R L Y+VFD++Y + + + RD + + P G LT LPL RR +L +V +LE V+ + + D +R ++L + FE A+ EEGL+VKDL G Y++G+K++ LWIKMKPE+SDQT ++D+++L
Sbjct: 246 LRYVCSALTDSSRQIDRDALGVQLHRPFAPMLATMLHHQLYKVEPAMHGHPFAVEMKIDGERMLCHKDGGQVEWFSRSATDYTDKYGPMLTPHVIRCVEVEQCILDGEVVGWDYEQETYLSFKENRSIITDDDHSR---RRTLVYIVFDIVYLDDPRASQMLQLNSSDISGTNRDLTKKVVPP---------GPLTFLPLSKRRNLLEVVVRPEPKKLELVRHRRIESTDAEDRVERLMDAFES-ALKDMEEGLMVKDLTGSYILGEKARALQLWIKMKPEFSDQTTNLDVIVL 526
BLAST of mRNA_Ecto-sp8_S_contig11250.1610.1 vs. uniprot
Match: H3HDA1_PHYRM (DNA ligase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HDA1_PHYRM) HSP 1 Score: 211 bits (537), Expect = 1.750e-57 Identity = 136/411 (33.09%), Postives = 216/411 (52.55%), Query Frame = 1
Query: 10 NSLRRVCSAFIGKHSSVTATFNLEVFTTFSPMLAMNFFYGLGKIVPSLQGRPFCMDVKLDGERMLCHREGNKVKWFTRNAKDYTDKYGAALTPHIVGGVSAH-KCVLDGEVVTWDDNTGSMVPFGSNRTYAKEELEGRGSGTRWLFYVVFDVLYAEGSGGGLEDGGTMDEVVRDAVRNSIAPCPPPTEVQAGNLTALPLDVRRKVLRSIVTENEHRLEFVKSWEVPAGDEVER-KKQLDECFEQRAIHLNEEGLVVKDLHGHYMIGDKSKKTPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVGVAVPNEDGQPRKE----------YYPLARVGTGYSINELEDLNELLKDKWKSFDTSDPTHFDPHRAGVKKSSRDGVPLTKWIAAEDSVCLQVKCMEI 1206
N L +VC+ K+S+V L+ F F+PMLA G+ + ++ G F M+ KLDGER+ CH G +V++ +RN +YT+ YG ++ PH++ + C+LDGE++ WD+ + FG + A +G + RWL YVV+DV+Y G G ++++R+ + P EV A + LPL RRK+L I+ +HR+ ++ V ER +K + E +Q + EG+++KDL+ HYM G+ S+K+ W+K+KP+Y+ T D+D +I+ + G+ RSG +S FL+GV + D E Y A+VGTGY++ ELE + + L+ W+ +D +D PH G K D P WI S L+V E+
Sbjct: 207 NDLHKVCTDL--KNSAVRYVPQLQPFQVFTPMLAKR--VNFGECISAINGDTFVMEPKLDGERITCHVRGEEVQFISRNGINYTEIYGPSIKPHVLSQLEPGVDCILDGEMMVWDNVEYRLREFGLLKNTANAVRKGEAT-NRWLCYVVWDVVYLGG-------GPKAEQLIREVFKG-------PGEVSA--VMGLPLHARRKLLLRILKPLDHRIIIIEQTFVNDKTPKERHEKVMAEVDKQ--VSNGGEGVIMKDLNAHYMCGETSRKSKKWLKLKPDYAGMTTDLDAIIVGGFYGTGRRRSGNVSVFLLGVLAHSLDENKAAEATKPGAACPAVYTFAKVGTGYNLEELEQMRQELEPYWQPWDDND---IPPHLNGWKPQKSDLRP-DVWIDPRHSKILEVYGFEL 590
BLAST of mRNA_Ecto-sp8_S_contig11250.1610.1 vs. uniprot
Match: A0A484DRF2_BRELC (DNA ligase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRF2_BRELC) HSP 1 Score: 212 bits (540), Expect = 2.690e-57 Identity = 134/412 (32.52%), Postives = 216/412 (52.43%), Query Frame = 1
Query: 10 NSLRRVCSAFIGKHSSVTATFNLEVFTTFSPMLAMNFFYGLGKIVPSLQGRPFCMDVKLDGERMLCHREGNKVKWFTRNAKDYTDKYGAALTPHIVGGVSAH-KCVLDGEVVTWDDNTGSMVPFGSNRTYAKEELEGRGSGTRWLFYVVFDVLYAEGSGGGLEDGGTMDEVVRDAVRNSIAPCPPPTEVQAGNLTALPLDVRRKVLRSIVTENEHRLEFVKSWEVPAGDEVERKKQLDECFEQRAIHLNE--EGLVVKDLHGHYMIGDKSKKTPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVGVAVPNED----------GQPRKEYYPLARVGTGYSINELEDLNELLKDKWKSFDTSDPTHFDPHRAGVKKSSRDGVPLTKWIAAEDSVCLQVKCMEI 1206
N L++VC ++S++ LE F F+PMLA G+ + ++ F ++ KLDGER+ CH G +V++ +RN +YTDKYG ++TPH++ + C+LDGE++ WD+ + FG + A +G + RWL YVV+D++Y GS ++++ + + P E+ A + LPL RRK+L I+ +HR+ V E ++ K + D+ + + L+ EG+++KDL+ HYM G+ S+KT W+K+KP+Y+ T D+D +I+ + G+ RSG +S FL+GV + D G P Y A+VGTGY++ ELE + + L W+ +D T PH +G K D P WI S L+V E+
Sbjct: 220 NDLQKVCREL--RNSAIRYVPQLEPFQVFTPMLAKR--VNFGECISAINCDAFVLEPKLDGERITCHVCGKEVQFISRNGINYTDKYGPSITPHVLSQLEQGVDCILDGEMMVWDNTEYRLREFGLLKNTANAVRKGERT-NRWLCYVVWDIVYLGGS-------PKANQLIHEVFQG-------PGEISA--VMGLPLHARRKLLLRILKPLDHRIVIV---EQKLVNDASAKVRHDKVMAEVDLQLSNGGEGVIMKDLNAHYMCGESSRKTKKWLKLKPDYAGMTTDLDTIIVGGFYGTGRRRSGNVSVFLLGVLAHSLDEMGAAEAMKPGAPCPVVYTFAKVGTGYNLEELEQMRQELAPHWQPWDD---TKIAPHLSGWKPPKSDLRP-DVWIDPRHSKILEVYGFEL 603
BLAST of mRNA_Ecto-sp8_S_contig11250.1610.1 vs. uniprot
Match: A0A8J4S172_9STRA (DNA ligase n=1 Tax=Phytophthora kernoviae 00238/432 TaxID=1284355 RepID=A0A8J4S172_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.200e-56 Identity = 133/410 (32.44%), Postives = 209/410 (50.98%), Query Frame = 1
Query: 10 NSLRRVCSAFIGKHSSVTATFNLEVFTTFSPMLAMNFFYGLGKIVPSLQGRPFCMDVKLDGERMLCHREGNKVKWFTRNAKDYTDKYGAALTPHIVGGVSAH-KCVLDGEVVTWDDNTGSMVPFGSNRTYAKEELEGRGSGTRWLFYVVFDVLYAEGSGGGLEDGGTMDEVVRDAVRNSIAPCPPPTEVQAGNLTALPLDVRRKVLRSIVTENEHRLEFVKSWEVPAGDEVERKKQLDECFEQRAIHLNEEGLVVKDLHGHYMIGDKSKKTPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVGVAVPNEDGQPRKE----------YYPLARVGTGYSINELEDLNELLKDKWKSFDTSDPTHFDPHRAGVKKSSRDGVPLTKWIAAEDSVCLQVKCMEI 1206
N L +VC+ ++S+V LE F FSPM+A +G + + ++ F M+ KLDGER+ CH +G +V++ +RN +YT+ YG ++TPH++ + C+LDGE++ WD+ FG + A G + RWL Y V+DV+Y GS + ++ + + P EV A + LPL RRK+L I++ +HR+ ++ V A ER + R I EG+++KDL+ HYM G+ S++ W+K+KP+Y+ T D+D+LI+ + G+ RSG +S FL+GV + D E Y ARVGTGY++ ELE + + L W+ +D + + PH G K P WI S L+V E+
Sbjct: 206 NDLHKVCTDL--RNSAVRYVPQLEPFRVFSPMVAKQVTFG--ECITAINADTFVMEPKLDGERITCHVQGKQVQFISRNGVNYTELYGTSMTPHVLSQLMPGVDCILDGEMMVWDNTEYQFREFGLLKNVANAMRNGDAT-NRWLCYTVWDVVYLGGS-------PKAESLIHEVFKG-------PREVSA--VMGLPLHARRKLLLRILSPLDHRITIIEQTAVNAKSPKERH-DIVMAEVDRQISNGGEGVIMKDLNAHYMCGESSRRAKKWLKLKPDYAGMTTDLDVLIIGGFYGTGRRRSGNVSAFLLGVLAQSVDENAAAETLKPGASCPMVYTFARVGTGYNLEELEQMRQELDPYWQPWDDN---NIPPHLNGWKPQKYYLKP-DLWIDPRHSKVLEVYGFEL 589
BLAST of mRNA_Ecto-sp8_S_contig11250.1610.1 vs. uniprot
Match: G4YG23_PHYSP (DNA ligase n=3 Tax=Phytophthora TaxID=4783 RepID=G4YG23_PHYSP) HSP 1 Score: 207 bits (528), Expect = 1.090e-55 Identity = 135/411 (32.85%), Postives = 213/411 (51.82%), Query Frame = 1
Query: 10 NSLRRVCSAFIGKHSSVTATFNLEVFTTFSPMLAMNFFYGLGKIVPSLQGRPFCMDVKLDGERMLCHREGNKVKWFTRNAKDYTDKYGAALTPHIVGGVSAH-KCVLDGEVVTWDDNTGSMVPFGSNRTYAKEELEGRGSGTRWLFYVVFDVLYAEGSGGGLEDGGTMDEVVRDAVRNSIAPCPPPTEVQAGNLTALPLDVRRKVLRSIVTENEHRLEFVKSWEVPAGDEVER-KKQLDECFEQRAIHLNEEGLVVKDLHGHYMIGDKSKKTPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVGV----------AVPNEDGQPRKEYYPLARVGTGYSINELEDLNELLKDKWKSFDTSDPTHFDPHRAGVKKSSRDGVPLTKWIAAEDSVCLQVKCMEI 1206
N L +VC ++S+V LE F F+PMLA G+ + ++ F M+ KLDGER+ CH +G +V++ +RN +YT+ Y ++ PH++ + C+LDGE++ WD+ + FG + A +G + RWL YVV+DV+Y GS ++++R+ + P E+ A + LPL RRK+L I+ +HR+ ++ V ER K + E EQ + EG+++KDL+ HYM G+ S+KT W+K+KP+Y+ T D+D +I+ + G+ RSG +S FL+GV A E G Y A+VGTGY+++ELE + + L+ W+ +D + PH G K D P WI S L+V E+
Sbjct: 203 NDLHKVCREL--RNSAVRYVPQLEPFQVFTPMLAKR--VNFGECISAINADAFVMEPKLDGERITCHVQGKEVQFISRNGINYTENYAPSIKPHVLSQLEPGVDCILDGEMMVWDNVGYRLREFGLLKNTANAVRKGEAT-NRWLCYVVWDVVYLGGS-------PKAEQLIREVFKG-------PGEISA--VMGLPLHARRKLLLRILKPLDHRIIILEQKLVNDKSAKERHSKVMAEVDEQ--VSNGGEGVIMKDLNAHYMCGESSRKTKKWLKLKPDYAGMTTDLDAIIIGGFYGVGRRRSGNVSVFLLGVLAHSLDENSAAKATEPGAACPTVYTFAKVGTGYNLDELEQMRQELEPYWQPWDDD---NIPPHLNGWKPQKSDLRP-DVWIDPRHSKILEVYGFEL 586 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11250.1610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11250.1610.1 >prot_Ecto-sp8_S_contig11250.1610.1 ID=prot_Ecto-sp8_S_contig11250.1610.1|Name=mRNA_Ecto-sp8_S_contig11250.1610.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=416bp SRNNSLRRVCSAFIGKHSSVTATFNLEVFTTFSPMLAMNFFYGLGKIVPSback to top mRNA from alignment at Ecto-sp8_S_contig11250:221..6129+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11250.1610.1 ID=mRNA_Ecto-sp8_S_contig11250.1610.1|Name=mRNA_Ecto-sp8_S_contig11250.1610.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5909bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11250:221..6129+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11250:221..6129+ >mRNA_Ecto-sp8_S_contig11250.1610.1 ID=mRNA_Ecto-sp8_S_contig11250.1610.1|Name=mRNA_Ecto-sp8_S_contig11250.1610.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1248bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11250:221..6129+ (Ectocarpus species8 EcLAC_412)back to top |