mRNA_Ecto-sp8_S_contig11244.1606.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11244.1606.1 vs. uniprot
Match: D8LR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR26_ECTSI) HSP 1 Score: 464 bits (1195), Expect = 5.560e-147 Identity = 214/221 (96.83%), Postives = 216/221 (97.74%), Query Frame = 1
Query: 127 WYGSLTSNNTLWSRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSAEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEDDCDSQCGEAGGTFYEHIGLCECH 789
WYGSLTSNNTLWSRDDAC ECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSAEE+GGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECF+CPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSE DCDSQCGEAGGTFYEHIGLCECH
Sbjct: 3322 WYGSLTSNNTLWSRDDACDECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSAEEEGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFICPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSES---DCDSQCGEAGGTFYEHIGLCECH 3539
BLAST of mRNA_Ecto-sp8_S_contig11244.1606.1 vs. uniprot
Match: A0A662XLD3_9STRA (Ephrin_rec_like domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLD3_9STRA) HSP 1 Score: 218 bits (556), Expect = 3.570e-61 Identity = 98/204 (48.04%), Postives = 131/204 (64.22%), Query Frame = 1
Query: 175 ACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSAEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEDDCDSQCGEAGGTFYEHIGLCEC 786
+C CPPGT+G D +R CD C GYVCLG T ++ PT E DGG+ C G YCP GS EI C GSY P+ + AS C +CP + YQ+ G A+CLPCS+S+ + + AT+C C+G +RAFQ+SDG CIC GYE+Y++ +L S DG +DCQPIVY+RC + + G CVS CD+ C GT+ +G+C+C
Sbjct: 1942 SCEACPPGTFGIDANRSRCDECLEGYVCLGATSSSHPTGRETDGGYPCPAGFYCPAGSSVEITCPRGSYQPQTKAPNASSCLLCPENSYQNAIGQASCLPCSTSAFAGSGATKCTCVGSHRAFQMSDGYCICEPGYEFYDQDMILRSDEDGEVDCQPIVYDRCGSNQVRSDSGSCVSSSGSA-CDASCNNGTGTYVASLGVCQC 2144
BLAST of mRNA_Ecto-sp8_S_contig11244.1606.1 vs. uniprot
Match: A0A6G0S9T2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0S9T2_9STRA) HSP 1 Score: 215 bits (548), Expect = 4.260e-60 Identity = 98/208 (47.12%), Postives = 135/208 (64.90%), Query Frame = 1
Query: 163 SRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSAEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEDDCDSQCGEAGGTFYEHIGLCEC 786
S D +C C PGT+G D +R CD C GYVCLG T ++ P S E D G+ C G+YCP GS EI C +G+Y P +S AS C +CPA+ YQ+ G ++CLPCS+S+ + A AT+C C+G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQPIVY+RC + + G CVS + CD+ C GT+ +G+C+C
Sbjct: 1929 SLDSSCEACEPGTFGIDANRTRCDECLEGYVCLGATNSSHPESRELDRGYPCPPGYYCPAGSSSEIACPSGTYQPIYKASNASACLLCPANSYQNAPGQSSCLPCSTSAYAGAGATKCTCVGSHRAFQMTDGYCICEPGYEFYDQDMILRSDEDGDVDCQPIVYDRCSSSQVRSDSGSCVSASGKA-CDASCNNGTGTYVASLGVCQC 2135
BLAST of mRNA_Ecto-sp8_S_contig11244.1606.1 vs. uniprot
Match: A0A329SQQ8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SQQ8_9STRA) HSP 1 Score: 215 bits (548), Expect = 4.270e-60 Identity = 96/204 (47.06%), Postives = 132/204 (64.71%), Query Frame = 1
Query: 175 ACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSAEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEDDCDSQCGEAGGTFYEHIGLCEC 786
+C CPPGT+G D +R CD C G+VCLG T ++ PTS E D G+ C G+YCP GS EI C G+Y P +S S C +CP + YQ+ EG A+CLPCS+S+ + AT+C C+G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQPIVY+RC + + G CVS + CD+ C GT+ +G+C+C
Sbjct: 2429 SCEACPPGTFGIDVNRTRCDECLEGFVCLGATNSSHPTSREVDRGYPCPTGYYCPAGSSSEIACPRGTYQPSYKASNESACLLCPENSYQNSEGQASCLPCSTSAFAGTGATKCTCVGSHRAFQMTDGYCICEPGYEFYDQDMILRSDEDGDVDCQPIVYDRCSSNQVRSDSGSCVSASGKA-CDATCNNGTGTYVASLGVCQC 2631
BLAST of mRNA_Ecto-sp8_S_contig11244.1606.1 vs. uniprot
Match: A0A6G0M0R9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0M0R9_9STRA) HSP 1 Score: 215 bits (548), Expect = 4.280e-60 Identity = 98/208 (47.12%), Postives = 135/208 (64.90%), Query Frame = 1
Query: 163 SRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSAEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEDDCDSQCGEAGGTFYEHIGLCEC 786
S D +C C PGT+G D +R CD C GYVCLG T ++ P S E D G+ C G+YCP GS EI C +G+Y P +S AS C +CPA+ YQ+ G ++CLPCS+S+ + A AT+C C+G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQPIVY+RC + + G CVS + CD+ C GT+ +G+C+C
Sbjct: 3339 SLDSSCEACEPGTFGIDANRTRCDECLEGYVCLGATNSSHPESRELDRGYPCPPGYYCPAGSSSEIACPSGTYQPIYKASNASACLLCPANSYQNAPGQSSCLPCSTSAYAGAGATKCTCVGSHRAFQMTDGYCICEPGYEFYDQDMILRSDEDGDVDCQPIVYDRCSSSQVRSDSGSCVSASGKA-CDASCNNGTGTYVASLGVCQC 3545
BLAST of mRNA_Ecto-sp8_S_contig11244.1606.1 vs. uniprot
Match: A0A6A3PAM2_9STRA (Ephrin_rec_like domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3PAM2_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.470e-59 Identity = 98/208 (47.12%), Postives = 134/208 (64.42%), Query Frame = 1
Query: 163 SRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSAEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEDDCDSQCGEAGGTFYEHIGLCEC 786
S D +C C PGT+G D +R CD C GYVCLG T + P S E D G+ C G+YCP GS EI C +G+Y P +S AS C +CPA+ YQ+ G ++CLPCS+S+ + A AT+C C+G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQPIVY+RC + + G CVS + CD+ C GT+ +G+C+C
Sbjct: 2673 SLDSSCEACEPGTFGIDANRTRCDKCLEGYVCLGATNSNHPESRELDRGYPCPPGYYCPAGSSSEIACPSGTYQPIYKASNASACLLCPANSYQNDLGQSSCLPCSTSAYAGAGATKCTCVGSHRAFQMTDGYCICEPGYEFYDQDMILRSDEDGDVDCQPIVYDRCSSSQVRSDSGSCVSASGKA-CDASCNNGTGTYVASLGVCQC 2879
BLAST of mRNA_Ecto-sp8_S_contig11244.1606.1 vs. uniprot
Match: A0A6A4G474_9STRA (Ephrin_rec_like domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G474_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.470e-59 Identity = 98/208 (47.12%), Postives = 134/208 (64.42%), Query Frame = 1
Query: 163 SRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSAEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEDDCDSQCGEAGGTFYEHIGLCEC 786
S D +C C PGT+G D +R CD C GYVCLG T + P S E D G+ C G+YCP GS EI C +G+Y P +S AS C +CPA+ YQ+ G ++CLPCS+S+ + A AT+C C+G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQPIVY+RC + + G CVS + CD+ C GT+ +G+C+C
Sbjct: 2768 SLDSSCEACEPGTFGIDANRTRCDKCLEGYVCLGATNSNHPESRELDRGYPCPPGYYCPAGSSSEIACPSGTYQPIYKASNASACLLCPANSYQNDLGQSSCLPCSTSAYAGAGATKCTCVGSHRAFQMTDGYCICEPGYEFYDQDMILRSDEDGDVDCQPIVYDRCSSSQVRSDSGSCVSASGKA-CDASCNNGTGTYVASLGVCQC 2974
BLAST of mRNA_Ecto-sp8_S_contig11244.1606.1 vs. uniprot
Match: D0MZ33_PHYIT (Ephrin_rec_like domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MZ33_PHYIT) HSP 1 Score: 212 bits (540), Expect = 5.030e-59 Identity = 94/204 (46.08%), Postives = 132/204 (64.71%), Query Frame = 1
Query: 175 ACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSAEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEDDCDSQCGEAGGTFYEHIGLCEC 786
+C CPPGT+G D +R CD C G+VCLG T ++ PTS E D G+ C G+YCP GS EI C G+Y P +S S C +CP + YQ+ G ++CLPCS+S+ + AT+C C+G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQPIVY+RC + + G+CVS + CD+ C GT+ +G+C+C
Sbjct: 2162 SCEACPPGTFGIDVNRTRCDECLEGFVCLGATNSSHPTSREVDRGYPCPPGYYCPTGSSSEIACPRGTYQPNYKASNVSACLLCPENSYQNSVGQSSCLPCSTSAFAGTGATKCMCVGSHRAFQMTDGYCICEPGYEFYDQDMILRSDEDGDVDCQPIVYDRCSSSQVRSDSGLCVSASGKA-CDATCDNGTGTYVASLGVCQC 2364
BLAST of mRNA_Ecto-sp8_S_contig11244.1606.1 vs. uniprot
Match: A0A6A3NX77_9STRA (Ephrin_rec_like domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NX77_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.730e-58 Identity = 97/208 (46.63%), Postives = 133/208 (63.94%), Query Frame = 1
Query: 163 SRDDACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSAEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEDDCDSQCGEAGGTFYEHIGLCEC 786
S D +C C PGT+G D +R CD C GYVCLG T + P S E D G+ C G+YCP GS EI C +G+Y P +S AS C +CPA+ YQ+ G ++CLPCS+S+ + A AT+C C+G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQ IVY+RC + + G CVS + CD+ C GT+ +G+C+C
Sbjct: 2601 SLDSSCEACEPGTFGIDANRTRCDKCLEGYVCLGATNSNHPESRELDRGYPCPPGYYCPAGSSSEIACPSGTYQPIYKASNASACLLCPANSYQNDLGQSSCLPCSTSAYAGAGATKCTCVGSHRAFQMTDGYCICEPGYEFYDQDMILRSDEDGDVDCQAIVYDRCSSSQVRSDSGSCVSASGKA-CDASCNNGTGTYVASLGVCQC 2807
BLAST of mRNA_Ecto-sp8_S_contig11244.1606.1 vs. uniprot
Match: A0A0P1B283_PLAHL (Insulin-like growth factor binding protein, N-terminal n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B283_PLAHL) HSP 1 Score: 208 bits (530), Expect = 1.110e-57 Identity = 95/205 (46.34%), Postives = 127/205 (61.95%), Query Frame = 1
Query: 175 ACAECPPGTYGADPDRLVCDICPGGYVCLGTTITATPTSAEEDGGFQCTVGHYCPEGSWEEIPCAAGSYNPEVGSSAASECFVCPADHYQDQEGSAACLPCSSSSTSEANATECKCLGLNRAFQLSDGQCICRSGYEYYNEGGVLVSTVDGAIDCQPIVYERCYTGEALDADGICVSERWEDDCDSQCGEAGGTFYEHIGLCECH 789
+C C PGT+G+D +R CD C G+VCLG T T+ PTS E D G+ C G YCP GS EI C G+Y P AS C +CP + YQ+ EG CLPCSSS+ + + +C C G +RAFQ++DG CIC GYE+Y++ +L S DG +DCQPIVY RC + + +G CVS + CD+ C GTF +G+C+C+
Sbjct: 3343 SCEACSPGTFGSDFNRTRCDQCLEGFVCLGATTTSHPTSPEADRGYPCPPGFYCPAGSSLEIACPRGTYQPSYEGKNASACLLCPDNTYQNLEGQTTCLPCSSSAYAGTGSAKCSCAGSHRAFQMTDGYCICEPGYEFYDQNMILRSDEDGEVDCQPIVYARCSSSQVRSDNGSCVSASGKV-CDAACNSGAGTFVASLGICQCN 3546 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11244.1606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11244.1606.1 >prot_Ecto-sp8_S_contig11244.1606.1 ID=prot_Ecto-sp8_S_contig11244.1606.1|Name=mRNA_Ecto-sp8_S_contig11244.1606.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=263bp TPEPIVCPRGYYCPLGSSEPVACVLGTYCPEGSEIFTSCPLGWYGSLTSNback to top mRNA from alignment at Ecto-sp8_S_contig11244:147..3030+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11244.1606.1 ID=mRNA_Ecto-sp8_S_contig11244.1606.1|Name=mRNA_Ecto-sp8_S_contig11244.1606.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2884bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11244:147..3030+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11244:147..3030+ >mRNA_Ecto-sp8_S_contig11244.1606.1 ID=mRNA_Ecto-sp8_S_contig11244.1606.1|Name=mRNA_Ecto-sp8_S_contig11244.1606.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=789bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11244:147..3030+ (Ectocarpus species8 EcLAC_412)back to top |