mRNA_Ecto-sp8_S_contig11220.1579.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig11220.1579.1
Unique NamemRNA_Ecto-sp8_S_contig11220.1579.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig11220.1579.1 vs. uniprot
Match: D7G9C0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9C0_ECTSI)

HSP 1 Score: 476 bits (1225), Expect = 1.090e-167
Identity = 282/303 (93.07%), Postives = 285/303 (94.06%), Query Frame = 1
Query:    1 MVRTAGVVAGATLVGLLDVASVAGEDFQVVTPSEGMTVISSRKYTVEWTNNFANSFVEIDLYYCGSSCKEGECGQWITSLCPYGGAGCHDNEGDYDVVMPEPMAGTSGGAYKGLTVISPETGDLAYVGQEYTVQFDYFSEVGSRVGRFNIELYEDNALGGCNGEFVSTLCDKPDIGCKDSQGDYDIIMADVPTGEYKIRISRFEDTATYGCSGVFFVVSDDGDSEDXXXXXXXXIAFSFDFSDLTDDIQDSFLDTADDVEFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDYSYRF 909
            MVRTAGVVAGA LVGLLDVASVAGE+FQV+ PSEGMTVISSR YTVEWTNN  NSFVEIDL YCGSSCKEGECGQWITSLCPYG  GCHD EGDYDVVMPEPMAGTSGGAYKGLT ISPETGDLAYVGQEYTVQFDYFSEV SRVGRFNIELYEDN LGGCNGEFVSTLCDKPDIGCKDSQGDYDIIMADVPTGE KI ISRFEDTATYGCSG+FFVVSDDGDSEDXXXXXXXXIAFSFDFSDLTDDIQDSFLDTADDVEFD    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDYSYRF
Sbjct:    1 MVRTAGVVAGAALVGLLDVASVAGEEFQVIAPSEGMTVISSRTYTVEWTNNVPNSFVEIDLCYCGSSCKEGECGQWITSLCPYGEDGCHDIEGDYDVVMPEPMAGTSGGAYKGLTFISPETGDLAYVGQEYTVQFDYFSEVDSRVGRFNIELYEDNGLGGCNGEFVSTLCDKPDIGCKDSQGDYDIIMADVPTGECKIHISRFEDTATYGCSGIFFVVSDDGDSEDXXXXXXXXIAFSFDFSDLTDDIQDSFLDTADDVEFDDRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDYSYRF 303          
BLAST of mRNA_Ecto-sp8_S_contig11220.1579.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 4.640e-70
Identity = 119/240 (49.58%), Postives = 143/240 (59.58%), Query Frame = 1
Query:   67 AGEDFQVVTPSEGMTVISSRKYTVEWTNNFANSFVEIDLYYCGSSCKEGECGQWITSLCPYGGAGCHDNEGDYDVVMPEPMAGTSGGAYKG-----------------------------------LTVISPETGDLAYVGQEYTVQFDYFSEVGSRVGRFNIELYEDNALGGCNGEFVSTLCDKPDIGCKDSQGDYDI-IMADVPTGEYKIRISRFEDTATYGCSGVFFVVSDDGDSED 678
            A    +VVTP+EG  V++SR YTVEWT   +N+  EIDLYYCGS C E ECG W+T+LCPYG  GC DNEGDYD+VMPEPM+GTSG  YK                                    +TV SP +GD A  G+EYTV+FDY + +GS VGRF I+LY     G C G F+ TLCDKP IGCKDS GDYD+ I  D   G Y IR+  FED + YGCS  F ++  D   +D
Sbjct:    4 AASALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDC-GTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEILGADDSPDD 242          
BLAST of mRNA_Ecto-sp8_S_contig11220.1579.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 7.240e-70
Identity = 126/255 (49.41%), Postives = 154/255 (60.39%), Query Frame = 1
Query:   67 AGEDFQVVTPSEGMTVISSRKYTVEWTNNFANSFVEIDLYYCGSSCKEGECGQWITSLCPYGGAGCHDNEGDYDVVMPEPMAGTSGGAYK-----------------------------------GLTVISPETGDLAYVGQEYTVQFDYFSEVGSRVGRFNIELYEDNALGGCNGEFVSTLCDKPDIGCKDSQGDYDI-IMADVPTGEYKIRISRFEDTATYGCSGVFFVVSDDGDSEDXXXXXXXXIAFSFDF 723
            A    +V TPS+G+TVI+ R YTVEWT   +++  EIDLYYCGS C E +CG W+T+LCPYG  GC DNEGDYD+VMPEPM GTSG  YK                                    L V SP +GDLA    EYTV+FDY + VGS V RF I+LY  +  G C G +V ++CDKP IGCKDS GDYD+ I  D   GEYKIR++RFED + Y CSG F +  ++GD  DXXXXX    + S+ F
Sbjct:   16 AANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDC-GTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTI--EEGDDSDXXXXXEDAFSLSYRF 267          
BLAST of mRNA_Ecto-sp8_S_contig11220.1579.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 1.550e-69
Identity = 128/260 (49.23%), Postives = 151/260 (58.08%), Query Frame = 1
Query:    1 MVRTAGVVAGATLVGLLDVASVAGEDFQVVTPSEGMTVISSRKYTVEWTNNFANSFVEIDLYYCGSSCKEGECGQWITSLCPYGGAGCHDNEGDYDVVMPEPMAGTSGGAYKG-----------------------------------LTVISPETGDLAYVGQEYTVQFDYFSEVGSRVGRFNIELYEDNALGGCNGEFVSTLCDKPDIGCKDSQGDYDI-IMADVPTGEYKIRISRFEDTATYGCSGVFFVVSDDGDS 672
            MVRT  V   A   G+L VAS      +VVTP+ G  V+SSR YTVEW+   +N   EIDLYYC S C E ECG+W+T+LCPYG  GC DNEGDYD+VMPEPM+GTSG  YK                                    +TV SP TGD A  G+EYTV+FDY + +GS VGRF I+LY     G C G F+ TLCDKP IGCKDS GDYD+ I  D   G Y IR+  FED + YGCS  F ++  D  S
Sbjct:    2 MVRTGFV---ALACGMLGVASA----LEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDC-GTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEILGADDSS 253          
BLAST of mRNA_Ecto-sp8_S_contig11220.1579.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 4.680e-68
Identity = 116/238 (48.74%), Postives = 143/238 (60.08%), Query Frame = 1
Query:   67 AGEDFQVVTPSEGMTVISSRKYTVEWTNNFANSFVEIDLYYCGSSCKEGECGQWITSLCPYGGAGCHDNEGDYDVVMPEPMAGTSGGAYKG-----------------------------------LTVISPETGDLAYVGQEYTVQFDYFSEVGSRVGRFNIELYEDNALGGCNGEFVSTLCDKPDIGCKDSQGDYDI-IMADVPTGEYKIRISRFEDTATYGCSGVFFVVSDDGDS 672
            A    +VVTPS  + V++ R YTVEWT   +  F EIDLY+CGS C E  CG W+T+LCPYG  GC DNEGDYD+VMPEPM+G S   YK                                    LTV SP  GD A  G+EYTV+FDY + VGS+V RF+I+LY  +  G C G +V+++CDKP IGCKDS GDYD+ I AD   G+YKIR+ RFED   YGCSG F ++  D +S
Sbjct:   16 AANALEVVTPSADLIVVADRTYTVEWTGADSGRF-EIDLYHCGSMCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDC-GTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIMGGDDES 251          
BLAST of mRNA_Ecto-sp8_S_contig11220.1579.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 4.210e-60
Identity = 109/233 (46.78%), Postives = 134/233 (57.51%), Query Frame = 1
Query:   67 AGEDFQVVTPSEGMTVISSRKYTVEWTNNFANSFVEIDLYYCGSSCKEGECGQWITSLCPYGGAGCHDNEGDYDVVMPEPMAGTSGGAYK----------------------------------GLTVISPETGDLAYVGQEYTVQFDYFSEVGSRVGRFNIELYEDNALGGCNGEFVSTLCDKPDIGCKDSQGDYDI-IMADVPTGEYKIRISRFEDTATYGCSGVFFVVSD 660
            A    +VV+P+ G++VI+ R YTVEWT    + F EIDLYYCGS C E ECG W+T+LCPYG  GC D +GDYD+VMPEPMAGTS G YK                                   LTV SP  GD A  G  YTV++DY + +GS   RF I+LY      G  G +V+TLCDKP IGC DSQGDYD+ I +D P G Y +R+  F D   + CS  F +V+D
Sbjct:   16 AANALEVVSPAAGISVIADRTYTVEWTGTSDSRF-EIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSSG-YKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIVND 246          
BLAST of mRNA_Ecto-sp8_S_contig11220.1579.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 1.120e-59
Identity = 107/231 (46.32%), Postives = 134/231 (58.01%), Query Frame = 1
Query:   67 AGEDFQVVTPSEGMTVISSRKYTVEWTNNFANSFVEIDLYYCGSSCKEGECGQWITSLCPYGGAGCHDNEGDYDVVMPEPMAGTSGGAYKGL----------------------------------TVISPETGDLAYVGQEYTVQFDYFSEVGSRVGRFNIELYEDNALGGCNGEFVSTLCDKPDIGCKDSQGDYDIIM-ADVPTGEYKIRISRFEDTATYGCSGVFFVV 654
            A    +VV+P+ G  V++   YTVEWT   +  + +IDLYYCGS C E ECG W+T+LCPYG  GC D +GDYDVVMPEPM GTS G YK +                                  +V SP  GD A  G EYTV+FDY + +GS V RF I+LY     G C G +V+T+CDKP IGCKDSQGDYD+++ +   +G Y IR+  FED   YGCS  F +V
Sbjct:   16 AANALEVVSPAAGDMVVADSAYTVEWTGATSGRY-DIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSSG-YKVMVTDSSDESDYGCSGDFTLIASTEAPDATDMGAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDC-GTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIV 243          
BLAST of mRNA_Ecto-sp8_S_contig11220.1579.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 6.030e-57
Identity = 104/234 (44.44%), Postives = 131/234 (55.98%), Query Frame = 1
Query:   67 AGEDFQVVTPSEGMTVISSRKYTVEWTNNFANSFVEIDLYYCGSSCKEGECGQWITSLCPYGGAGCHDNEGDYDVVMPEPMAGTSGGAYK----------------------------------GLTVISPETGDLAYVGQEYTVQFDYFSEVGSRVGRFNIELYEDNALGGCNGEFVSTLCDKPDIGCKDSQGDYDI-IMADVPTGEYKIRISRFEDTATYGCSGVFFVVSDD 663
            A    +VV+P  G++V++ R YTVEWT      F EIDLYYC S C +  CG W+T+LCPYG  GC D+ GDYD++MPEPM+GTS G YK                                   LTV SP  GD A  G+ YTV++DY +  GS   RF ++LY     G C G +V+TLCD+P IGC DSQGDYD+ I +D P G Y IR+  F+D   Y CS  F V + D
Sbjct:   16 AANALEVVSPDGGISVLADRAYTVEWTGTTTGRF-EIDLYYCNSFCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSSG-YKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEMGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDC-GTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEVDTSD 246          
BLAST of mRNA_Ecto-sp8_S_contig11220.1579.1 vs. uniprot
Match: D7FH21_ECTSI (Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 2.450e-53
Identity = 96/193 (49.74%), Postives = 116/193 (60.10%), Query Frame = 1
Query:   67 AGEDFQVVTPSEGMTVISSRKYTVEWTNNFANSFVEIDLYYCGSSCKEGECGQWITSLCPYGGAGCHDNEGDYDVVMPEPMAGTSGGAYK-----------------------------------GLTVISPETGDLAYVGQEYTVQFDYFSEVGSRVGRFNIELYEDNALGGCNGEFVSTLCDKPDIGCKDS 540
            A    +V TPS+G+TVI+ R YTVEWT   +++  EIDLYYCGS C E +CG W+T+LCPYG  GC DNEGDYD+VMPEPM+GTSG  YK                                    L V SP +GDLA    EYTV+FDY + VGSRV RF I+LY  +  G C G +V ++CDKP IGCKDS
Sbjct:   17 AANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVWDIHDEEDADCSDEFYLIASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSRVDRFAIDLYRADGDGDC-GTYVQSICDKPTIGCKDS 208          
BLAST of mRNA_Ecto-sp8_S_contig11220.1579.1 vs. uniprot
Match: A0A6H5KP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 1.830e-49
Identity = 94/227 (41.41%), Postives = 128/227 (56.39%), Query Frame = 1
Query:   82 QVVTPSEGMTVISSRKYTVEWTNNFANSFVEIDLYYCGSSCKEGECGQWITSLCPYGGAGCHDNEGDYDVVMPEPMAGTSGGAYKGLTVISPETGDLAYVGQEYTV-----------------------------------QFDYFSEVGSRVGRFNIELYEDNALGGCNGEFVSTLCDKPDIGCKDSQGDYDIIM-ADVPTGEYKIRISRFEDTATYGCSGVFFVV 654
            +V +P+ G  ++++   TVEWT   +  F +IDLYYCGS C E ECG W+T+LCPYG  GC D +GDYDVVMPEPM GTS G YK +   S +  D+   G E+T+                                    FD+ +  GS V RF+I+LY     G C G +V+++CDK  IGCKDSQGDYD+++ +D  +G Y IR+  FED   +GCS  F ++
Sbjct:   21 EVTSPAAGDMIVAASSTTVEWTGTSSGRF-DIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSSG-YKVMVTDSSDESDMGCSG-EFTLVASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDHDNGFGSSVNRFSIDLYMSGGSGDC-GTYVTSICDKSSIGCKDSQGDYDVVIPSDTESGMYSIRVGVFEDPDVFGCSDSFEII 243          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11220.1579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7G9C0_ECTSI1.090e-16793.07EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LI46_ECTSI4.640e-7049.58EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JRG9_9PHAE7.240e-7049.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFT9_9PHAE1.550e-6949.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYL2_ECTSI4.680e-6848.74EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
D7G3F0_ECTSI4.210e-6046.78EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G3E8_ECTSI1.120e-5946.32Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JY62_9PHAE6.030e-5744.44GPI-anchored domain-containing protein n=2 Tax=Ect... [more]
D7FH21_ECTSI2.450e-5349.74Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KP11_9PHAE1.830e-4941.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11220contigEcto-sp8_S_contig11220:1307..4928 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size912
Hectar predicted targeting categorysignal peptide
Exons6
Cds size912
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11220.1579.1prot_Ecto-sp8_S_contig11220.1579.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig11220 1307..4928 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143201.927606-CDS-Ecto-sp8_S_contig11220:1306..14311681143201.927606-CDS-Ecto-sp8_S_contig11220:1306..1431Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11220 1307..1431 +
1681143201.936926-CDS-Ecto-sp8_S_contig11220:2238..23231681143201.936926-CDS-Ecto-sp8_S_contig11220:2238..2323Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11220 2239..2323 +
1681143201.945546-CDS-Ecto-sp8_S_contig11220:2563..26891681143201.945546-CDS-Ecto-sp8_S_contig11220:2563..2689Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11220 2564..2689 +
1681143201.9540682-CDS-Ecto-sp8_S_contig11220:3358..34241681143201.9540682-CDS-Ecto-sp8_S_contig11220:3358..3424Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11220 3359..3424 +
1681143201.9623063-CDS-Ecto-sp8_S_contig11220:3883..40221681143201.9623063-CDS-Ecto-sp8_S_contig11220:3883..4022Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11220 3884..4022 +
1681143201.9711175-CDS-Ecto-sp8_S_contig11220:4557..49281681143201.9711175-CDS-Ecto-sp8_S_contig11220:4557..4928Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11220 4558..4928 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig11220.1579.1

>prot_Ecto-sp8_S_contig11220.1579.1 ID=prot_Ecto-sp8_S_contig11220.1579.1|Name=mRNA_Ecto-sp8_S_contig11220.1579.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=304bp
MVRTAGVVAGATLVGLLDVASVAGEDFQVVTPSEGMTVISSRKYTVEWTN
NFANSFVEIDLYYCGSSCKEGECGQWITSLCPYGGAGCHDNEGDYDVVMP
EPMAGTSGGAYKGLTVISPETGDLAYVGQEYTVQFDYFSEVGSRVGRFNI
ELYEDNALGGCNGEFVSTLCDKPDIGCKDSQGDYDIIMADVPTGEYKIRI
SRFEDTATYGCSGVFFVVSDDGDSEDDDMDSDDDIAFSFDFSDLTDDIQD
SFLDTADDVEFDDSDGEDDDVDSDDDFGDLMDDIHDSSFDTADDIERDYS
YRF*
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mRNA from alignment at Ecto-sp8_S_contig11220:1307..4928+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig11220.1579.1 ID=mRNA_Ecto-sp8_S_contig11220.1579.1|Name=mRNA_Ecto-sp8_S_contig11220.1579.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3622bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11220:1307..4928+ (Ectocarpus species8 EcLAC_412)
ATGGTTCGCACCGCTGGGGTGGTTGCGGGTGCCACCCTCGTCGGCTTGCT CGACGTCGCGTCTGTTGCCGGCGAAGACTTCCAGGTTGTTACGCCGTCTG AAGGGATGACCGTCATCTCAAGCAGGTGCGCCCGAGTGTGATGCAGAATG CCACCCGGCGTGGGGCGAAGGGACCTGGCGTTTTGTTTCACAGGCGGGAT ACTAGTACAGTCTAGACGATCTAATGATACCCTTCCATCGCTGTGAAACT TGTTGACAGGATCGAAACGTGTACCACATGGAGCATCGGAATAATTGATG TGTCGAGAACAAAGTACGGCCACCCAAACCAGTTTTTCTGTTGTCGAGAA AACCCTTCTCTCCTCGGACGTGTACTGTAGTCTAGATGCTGAGGGCACGC CCTCGCATGGGGGGATGTCGACCAACTAAGCAAGGATTAGGCCGGCAGAT TCGTGGGCATGACCGACCGTGGGTCACACGAACAACATATTATTCTGTAG TCTGGCCTTACGTACTCCAATCCGTCTATCTGGGAGGGTCGACGAGACTA CGTAGAATAATTATAGTTCACCGGTGAAAATAGGAAGGGGCAAAGATTCC TGTTGGTGGCAGTGGGTTGCGCAAAAACTTTTCGAATCTACGCGATGTTC AATACCAATAACCTGCTACTGCTTCGTGTGACGTCAGGTGTAAGTTTTCC CATTCATTGGCGTAAAATTCAGTACAGTAAGCTACCGACGACTCGATGGC TTCTTCTGGGGCATTTTCCTGTTCGCCGTGGTTCGCCCGAACCTTGTACG TGCTCGTCTCAACGGTGTGGCAATAAAAATAGGTTTCGTTCGTTCATAGA AAAATGTTATCCTGAGGGCACAGAGTTGCTGCAATGATGGAGTCGACTCA CATTATTAATGCTCTGTCATACATGCTTGCAGGAAGTATACGGTGGAATG GACCAATAACTTCGCCAACAGCTTTGTCGAGATCGATCTATACTACTGCG GCTCCAGCTGCAAAGAGGTATTGGTTTTGCGTAGCTTGGCGCACTTTCAT AGATGTGGTATGTGCTGGGATTGACATCTCAAAGGGTGACTGCGGAAGAT TTCACTGTCCAGACTATTGAAGAGGTTGTCAAATGGGGAATAAACCTAAA ATCTTCTTGGTTCTTGCGAAGGTTTTAGCTGGCAGTTTCCCTTACTGTAG TTTCATGTATCCTGATGACGATATCATGTGTTTCTCGGTATCCCTTCTCT GCCGTAGGGCGAGTGTGGCCAGTGGATCACCTCGCTTTGCCCGTACGGGG GGGCTGGGTGCCACGACAATGAAGGAGACTACGACGTCGTCATGCCGGAG CCGATGGCCGGGACCTCCGGAGGAGCTTACAAGGTTTGCCGCAAACTGTT CTCATAAATATTAAGAGATACATTCGAATGAGCAACGCCCTGTTAGAGGG AGACGCAGACAGACTTGAAAACGAGGATCCTGTACGGTACATAGACTACA TAGACTATGCATATTTGTAGGGCGAAAAAAAATGAAGGTGGAATCTTTGA ATGTGTGGCAGTTTCACATGCAGACGAACGCACGATACTGACCCCCATCA CATAGTCAATGGCATGGACCATTCCCGTGTGGTCATCAGCCACGAGTCAA CCATGCCGTACTGCGTAGTGGACTGCACAACACTTGGATCTTTGAAAATG AGACCGTGCGACAAAACACAGTAGAGTTTTTCCATGCGTCGCGAAGCAAA AGTTCGGTGTGGACGGATGGAACACATAATTTACCTCTGCATGTAACCTG TCCGTGCGGACGTACTTTTCCTACCACGTACTACCGTATTCCCAACGTGC TGAACTGCAGCAAGACAACGTTAGATGTGAACTCACGAACTTGACGTATG CCTTCGACATTGGTATCATTCCCGACTTCTGATCGCGCCTTCAGGTGGGC GTGGCAGACGCCAAAGACCCGACCAACCAGTCCTGTTCGGGTGGATTCAC GCTCACGGCACTCGACGACATCGTCGTCGATCCCGACAACGATTTCGTTC AGGGGTTGACCGTCATTTCGCCGGAGACGGGAGACCTGGCTTACGTGGGG CAAGAATACACCGTGCAGGTGAACTATGATTTTCGATCCGCGAAACCGCG TTGTCGTTTCTCTTCGTGACCTGTGCAATTGAAAACATTAACGCTGAAAT GTTATCGCTCCCTACCGCGGTGTGGCCAATACGCGACATGCGAAAGTTTA GAACGTCGATCGAGATAGATGATTCCGGTATTCAACCGACGCACGAGTAG ATACTGCATGGTAATTTACGCAACCTCTCAGCACAGCGTTGGGGCCTGCA AACAAACCTGCGTCGACCCCCCTCTCGTCCGTCGAAGCAATGGACGTACG TGTTGTACTACACGACTCGTAGATGGAACGGGTAAGATCAGCTTGAGGAC ACCGCGTTCCGGTGATGAAGGCGTTATATCTGTCGACTGCATTGTATTTC ATCATCTCCGAGAAGATGGAGACGAATCGACGCCATGACCTGCAAATCCA CTTGTTGTGTGGACGTCATTGCACCAGTTTGACTACTTCAGCGAGGTCGG CTCGAGGGTAGGCCGGTTCAACATAGAACTCTACGAGGACAACGCGCTGG GTGGATGCAATGGGGAGTTCGTGTCTACACTTTGCGACAAGCCCGACATC GGCTGCAAGGATTCACGTGGGTATCCGACGTATCTTTGGTGATAGGCCAA GATAGGCATAGAAAGATCCCTGAAAAACAAATCCAAAGAAGTTTCGAAAC CCTCCCGGGAGTGTTCTGCTGTACCTACGCTCCCCCGAATGATTGTGCAG GTGGCTGCAACATTAGCCTCTTGGTTGATCTTCCGGCGATAGCAATTCTT CCGAAAAATGAACTCATTGGCGCAAACCCTAAGCCTAACCCCTGGCTCAC ATGAGCTAGGTTGGCGCTTGTGGCTAAGTTCGAGGTTGATGTGAAGGTGG CTACGTTCTATGTACATAGTCTACATGTAGGTTGATTGCCGGTGGCGAAG TTCTACATATGTAGGTTGAAATGCCCACGGTGGGCACTTCATGGGTCGCC CATGGGCCTCTCATGGGCATCCCCACGGACGGTTTAACAAAACTGTCAGG TGGTGTGGGAGATTGGCCCCCTCGGTCAGAAGCCTTTCCAGGCCATCCAT ATCATGGGATCCTTTATTGAATCAACATTCGTTCTGGCGTTGCACGCGCA GAGGGAGACTACGACATCATCATGGCCGATGTCCCCACCGGCGAGTACAA GATCCGTATCAGCAGGTTCGAGGATACCGCCACTTACGGCTGCTCCGGCG TCTTCTTCGTCGTGTCGGACGACGGAGACAGCGAGGATGACGACATGGAC TCGGATGATGACATCGCGTTTTCCTTCGACTTCAGCGACTTGACGGATGA CATACAGGACAGTTTCTTGGACACGGCCGACGACGTCGAGTTTGACGACA GCGACGGCGAGGACGACGACGTGGACTCGGATGATGACTTCGGCGACTTG ATGGATGATATACACGACAGTTCCTTCGATACGGCCGATGACATCGAGCG GGATTACTCGTACCGTTTTTGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11220:1307..4928+

>mRNA_Ecto-sp8_S_contig11220.1579.1 ID=mRNA_Ecto-sp8_S_contig11220.1579.1|Name=mRNA_Ecto-sp8_S_contig11220.1579.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=912bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11220:1307..4928+ (Ectocarpus species8 EcLAC_412)
ATGGTTCGCACCGCTGGGGTGGTTGCGGGTGCCACCCTCGTCGGCTTGCT
CGACGTCGCGTCTGTTGCCGGCGAAGACTTCCAGGTTGTTACGCCGTCTG
AAGGGATGACCGTCATCTCAAGCAGGAAGTATACGGTGGAATGGACCAAT
AACTTCGCCAACAGCTTTGTCGAGATCGATCTATACTACTGCGGCTCCAG
CTGCAAAGAGGGCGAGTGTGGCCAGTGGATCACCTCGCTTTGCCCGTACG
GGGGGGCTGGGTGCCACGACAATGAAGGAGACTACGACGTCGTCATGCCG
GAGCCGATGGCCGGGACCTCCGGAGGAGCTTACAAGGGGTTGACCGTCAT
TTCGCCGGAGACGGGAGACCTGGCTTACGTGGGGCAAGAATACACCGTGC
AGTTTGACTACTTCAGCGAGGTCGGCTCGAGGGTAGGCCGGTTCAACATA
GAACTCTACGAGGACAACGCGCTGGGTGGATGCAATGGGGAGTTCGTGTC
TACACTTTGCGACAAGCCCGACATCGGCTGCAAGGATTCACAGGGAGACT
ACGACATCATCATGGCCGATGTCCCCACCGGCGAGTACAAGATCCGTATC
AGCAGGTTCGAGGATACCGCCACTTACGGCTGCTCCGGCGTCTTCTTCGT
CGTGTCGGACGACGGAGACAGCGAGGATGACGACATGGACTCGGATGATG
ACATCGCGTTTTCCTTCGACTTCAGCGACTTGACGGATGACATACAGGAC
AGTTTCTTGGACACGGCCGACGACGTCGAGTTTGACGACAGCGACGGCGA
GGACGACGACGTGGACTCGGATGATGACTTCGGCGACTTGATGGATGATA
TACACGACAGTTCCTTCGATACGGCCGATGACATCGAGCGGGATTACTCG
TACCGTTTTTGA
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