mRNA_Ecto-sp8_S_contig11214.1573.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11214.1573.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 229 bits (583), Expect = 1.140e-65 Identity = 208/405 (51.36%), Postives = 251/405 (61.98%), Query Frame = 1
Query: 67 GPDQNSCVKVFIIAFNEMWGETWDAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDAPPLHPKRPCGTRLPRLRARSVTWNMPTAGELRNPIFAMTDSDRLVFGRGFEGNLEAVAWPRRLKTIDMRY-SNFNKPLERMRFPASLETIVLSEVXXXXXXXXXXXXXXXXXXFSEGSSFNQPITGGFLXXXLQEIALXXXXXXXXXDMVWXXXXLKLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITFAS---CEDYGDNAVTVYADXXXXXXXXXXXXXXXXXTLGEHFRQSLQGLGTWIPNLEALRLLDHKDGSGTEES-LLRGIEWPMVLRHLAVIKGSNLDGVTIPSVVQVDF 1266
GP + C++ I+A NE T D K WYTSTKELQLASL+FC CR QT+HLNV+ + PRRLLA+ DAPP HPKR C TR+PRLR+R VTWNMPTA +LR PIFAMTD + L FG F +LEAV WP L+T++ + S F++ +E +++P L+ + G FNQPI LQ++ XXX XXXX XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX C+++ N + ++A+ LG FRQSLQGLGTW+PNLE L LL H GSG +S LR IEWP LRHL +++G+++DGV IP VQV F
Sbjct: 45 GPTRKFCLEALIVALNE----TCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQNVTF------------------------GGDFNQPIERVKFPASLQQLIFRTSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGNRLNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWCDEFAGNGMVIFANFDQPIGSSVGPALLRRLVLGHMFRQSLQGLGTWMPNLEVLHLL-HYHGSGLGDSNFLREIEWPKGLRHLTLLEGTSIDGVDIPLAVQVLF 420
BLAST of mRNA_Ecto-sp8_S_contig11214.1573.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE) HSP 1 Score: 226 bits (576), Expect = 1.490e-65 Identity = 210/398 (52.76%), Postives = 242/398 (60.80%), Query Frame = 1
Query: 67 GPDQNSCVKVFIIAFNEMWGETWDAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDAPPLHPKRPCGTRLPRLRARSVTWNMPTAGELRNPIFAMTDSDRLVFGRGFEGNLEAVAWPRRLKTIDMRYSNFNKPLERMRFPASLETIVLSEVXXXXXXXXXXXXXXXXXXFSEGSSFNQPITGGFLXXXLQEIALXXXXXXXXXDMVWXXXXLKLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITFASCEDY-GDNAVTVYADXXXXXXXXXXXXXXXXXTLGEHFRQSLQGLGTWIPNLEALRLLDHKDGSGTEESLLRGIEWPMVLRHLAVIKGSNLDGVTIPSVVQ 1257
GP ++SC+ I+A NE T D K WYTSTKE QLASLEFC CR +QTL L V++RTPRRLLAA DAPP HPKR CGTR+PRLRAR VTW++PTA LRN I++M D+D L F R FE +LEAVAWPRRLKT+ E ++EV F + S F+QPI G +VW +L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + F ++ GD VT + X TLG++FRQSLQ LGTW+PNLE LL H SGTE+S LRGIEWP LR LAV + S+L GV IPS V+
Sbjct: 6 GPARDSCLNAIIVALNE----TSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPRRLKTV--------------------EVSGIAEVAK----------------FHDKSLFDQPIAG----------------------VVWPDTLEQLTFGLFLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVCFGVRQEVLGDVVVT--SKFNRXIGASAWPKAMHRLTLGQNFRQSLQELGTWMPNLETFHLLHHIHDSGTEDSFLRGIEWPKGLRQLAVCRLSSLAGVVIPSTVE 339
BLAST of mRNA_Ecto-sp8_S_contig11214.1573.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE) HSP 1 Score: 213 bits (542), Expect = 7.340e-60 Identity = 249/401 (62.09%), Postives = 274/401 (68.33%), Query Frame = 1
Query: 136 DAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDAPPLHPKRPCGTRLPRLRARSVTWNMPTAGELRNPIFAMTDSDRLVFGRGFEGNLEAVAWPRRLKTIDMRYSN-FNKPLERMRFPASLETIVLSEVXXXXXXXXXXXXXXXXXXFSEGSSFNQPITGGFLXXXLQEI----------------------ALXXXXXXXXXDMVWXXXXLKLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITFASCEDYGDNAVTVYADXXXXXXXXXXXXXXXXXTLGEHFRQSLQGLGTWIPNLEALRLLDHKDGSGTEESLLRGIEWPMVLRHLAVIKGSNLDGVTIPSVVQVDFL 1269
D K WYTSTKELQ ASLEFC CR YQTL L V+ +TPR LLAA DAP H KRPC TR+PRLRAR V WNMPTA EL++PIFA+ D RL FG FEG+LE+VAWP+RLK ID + + FN+P+E + FP SL + LS+ XXXXXXXXXXXXXXXXXX XXX XXXXXX XXXX X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E G + ++++ XXXXXXXXXXXXXXX TLG FRQSLQGLGTWIPNLE LDH +GSG E+SLLRGIEWP LR LAV + S LDGV IPS V+V L
Sbjct: 3 DGKRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAAVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSPIFALKDVVRLDFGPAFEGSLESVAWPQRLKEIDFSWGSLFNQPIEGVEFPPSLLELRLSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYRSRXXXXXXXXXXXXXXXXXXXGEAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHESQGFDHAIMFSEFXXXXXXXXXXXXXXXLTLGHKFRQSLQGLGTWIPNLEIFHFLDHSNGSGDEDSLLRGIEWPTGLRQLAVFRDSRLDGVIIPSTVEVSRL 403
BLAST of mRNA_Ecto-sp8_S_contig11214.1573.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI) HSP 1 Score: 188 bits (477), Expect = 7.680e-53 Identity = 97/162 (59.88%), Postives = 115/162 (70.99%), Query Frame = 1
Query: 67 GPDQNSCVKVFIIAFNEMWGETWDAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDAPPLHPKRPCGTRLPRLRARSVTWNMPTAGELRNPIFAMTDSDRLVFGRGFEGNLEAVAWPRRLKTIDMRYSN-FNKPLERMRFPASLETIVL 549
G N C+ I+A NE T D WYTSTKELQ ASLEFC CR Y +HL V+ + PR LLAA DAPP HPKR C TR+PRLRARSVTWNM A EL NPIFA+TD D L FG F+G+LEAV WPRRLK I+ Y++ FN+PLE +++P SL+ +VL
Sbjct: 8 GLTHNPCLSSLIVALNE----TCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEFLYTSPFNQPLELIKWPESLQHLVL 165
BLAST of mRNA_Ecto-sp8_S_contig11214.1573.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 194 bits (492), Expect = 4.320e-51 Identity = 99/168 (58.93%), Postives = 119/168 (70.83%), Query Frame = 1
Query: 49 SGSAGVGPDQNSCVKVFIIAFNEMWGETWDAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDAPPLHPKRPCGTRLPRLRARSVTWNMPTAGELRNPIFAMTDSDRLVFGRGFEGNLEAVAWPRRLKTIDMRYSN-FNKPLERMRFPASLETIVL 549
S S +GP ++SC+K +A NE T D K WYTSTKELQLASLE C CR YQTLHL V+A TPRRLLAA DAP HPKR CGTR+PRLRAR TWN+PTA +R IFA D D L FG+ F G+L+A+ WPRRLKTI+ R S+ N+ L+ + +PASL + L
Sbjct: 124 SPSCTLGPTRSSCLKTLTVALNE----TCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPLNRLLDGVSWPASLRKVCL 287
BLAST of mRNA_Ecto-sp8_S_contig11214.1573.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE) HSP 1 Score: 193 bits (491), Expect = 2.740e-50 Identity = 97/160 (60.62%), Postives = 115/160 (71.88%), Query Frame = 1
Query: 67 GPDQNSCVKVFIIAFNEMWGETWDAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDAPPLHPKRPCGTRLPRLRARSVTWNMPTAGELRNPIFAMTDSDRLVFGRGFEGNLEAVAWPRRLKTIDMR-YSNFNKPLERMRFPASLETI 543
GP N+C+ +A GET D K WYTSTKELQLASLEFC CR YQTLHL V+ R PR LLAA D PP HPKR R+PRLRAR VTWNMPTA ELR+PIFA+ D D L FG FEG+LEAV WPRRL++I +S FN P++ +++PASL+ +
Sbjct: 30 GPTSNTCLNAIYVAL----GETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAFHNFSPFNTPIDLVKWPASLKRL 185
BLAST of mRNA_Ecto-sp8_S_contig11214.1573.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE) HSP 1 Score: 189 bits (481), Expect = 6.410e-50 Identity = 229/394 (58.12%), Postives = 252/394 (63.96%), Query Frame = 1
Query: 91 KVFIIAFNEMWGETWDAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDAPPLHPKRPCGTRLPRLRARSVTWNMPTAGELRNPIFAMTDSDRLVFGRGFEGNLEAVAWPRRLKTIDMRYSNFNKPLERMRFPASLETIVLSE--------VXXXXXXXXXXXXXXXXXXFSEGSSFNQPITGGFLXXXLQEIALXXXXXXXXXDMVWXXXXLKLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITFASCEDYG-DNAVTVYADXXXXXXXXXXXXXXXXXTLGEHFRQSLQGLGTWIPNLEALRLLDHKDGSGTEESLLRGIEWPMVLRHLAVIKGSNLDGVTIP 1245
K I+A NEM D K WYTSTKELQLASLEFC CR YQ L L V+A+TPR LLAA DAPP H KRPC TR+PRLRAR V WNMPTA ELR +FA+ D + L FG F G+LEAV WP LK I S FN+ ASL+ + L XXXXXXXXXXXXXXXXXX XXX XXXX D+ XXXX XXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + G +NAV + A TLG F++SLQGLGT +PNLEA LLDH++GSG+E+SL RGIEWP VLRHL V S+LDGV IP
Sbjct: 19 KDLILALNEMC----DGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQIIFFSSEFNQXXXXXXXXASLQKLDLENSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLKEDVEXXXXXXXXXXXXXXXXXXEWATFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHDGEGFENAVMLSA-FNQRVDMCEWPVSMRRLTLGHKFKESLQGLGTRMPNLEAFHLLDHRNGSGSEDSL-RGIEWPKVLRHLVVFSNSSLDGVVIP 406
BLAST of mRNA_Ecto-sp8_S_contig11214.1573.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI) HSP 1 Score: 169 bits (429), Expect = 1.090e-43 Identity = 137/399 (34.34%), Postives = 162/399 (40.60%), Query Frame = 1
Query: 67 GPDQNSCVKVFIIAFNEMWGETWDAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDAPPLHPKRPCGTRLPRLRARSVTWNMPTAGELRNPIFAMTDSDRLVFGRGFEGNLEAVA-WPRRLKTIDMRYSNFNKPLERMRFPASLETIVLSEVXXXXXXXXXXXXXXXXXXFSEGSSFNQPITGGFLXXXLQEIALXXXXXXXXXDMVWXXXXLKLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITFASCEDYGDNAVTVYADXXXXXXXXXXXXXXXXXTLGEHFRQSLQGLGTWIPNLEALRLLDHKDGSGTEESLLRGIEWPMVLRHLAVIKGSNLDGVTIPSVVQV 1260
GP ++SC+ +IA NE T + + WYTSTKELQLASLEFC CR YQTLHL V+A+ PRRLLA DAPP HP+ C TR+PRLRAR VTW M A EL PIFAMTD D L FG E +LEA+ W R +S + R S SS G L L +A+ W C DN V V LG+ F+QSLQGLGTW+PNLE LRL D +D +SLL GI WP LR LAV + + +DGVTIPS V+V
Sbjct: 107 GPSRSSCLNALVIALNE----TCNGESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRLLARADAPPPHPELLCRTRVPRLRARRVTWGMRKAAELSIPIFAMTDVDCLKFG---ETSLEALRLWHGRDGWKRSSFSFLHYSTSR----------------------------------SVWSS------GQHLCRRLNSVAVVIARAYD-----WICDR-------------------------------------------------------------------------CRRKRDNDVLVLRPTHRQPWLAYVFASTP---LGDDFKQSLQGLGTWMPNLEVLRLFDFRDPDFGNDSLLLGIGWPTGLRQLAVYECTKMDGVTIPSTVEV 377
BLAST of mRNA_Ecto-sp8_S_contig11214.1573.1 vs. uniprot
Match: D7FUL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL5_ECTSI) HSP 1 Score: 147 bits (372), Expect = 1.610e-36 Identity = 84/167 (50.30%), Postives = 107/167 (64.07%), Query Frame = 1
Query: 55 SAGVGPDQNSCVKVFIIAFNEMWGETWDAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDAPPLHPKRPCG-TRLPRLRARSVTWNMPTAGELRNP--IFAMTDSDRLVFGRGFEGNLEAVAWPRRLKTIDMR-YSNFNKPLERMRFPASLETI 543
S GP ++SC+ ++A +E T D K WYTSTKELQLASL FC CR +QT+HL V+ PRRLLAA DAPP + TR P A + ++G + P +FAMTD D L FG FEGNLEAVAWPR LKTID+ +SNF KP++ + +P SL+T+
Sbjct: 126 STAPGPGRSSCLNAIVVALSE----TCDGKSWYTSTKELQLASLGFCTACRNHQTVHLKVDEHIPRRLLAAADAPPPASEAAVSDTRAPTHSASCDVEHADSSG-IEEPCTVFAMTDVDHLEFGWDFEGNLEAVAWPRWLKTIDLHPWSNFGKPIDLIEWPDSLQTL 287
BLAST of mRNA_Ecto-sp8_S_contig11214.1573.1 vs. uniprot
Match: A0A6H5K0U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0U4_9PHAE) HSP 1 Score: 101 bits (252), Expect = 5.970e-19 Identity = 54/133 (40.60%), Postives = 75/133 (56.39%), Query Frame = 1
Query: 58 AGVGPDQNSCVKVFIIAFNEMWGETWDAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDAPPLHPKRPCGTRLPRLRARSVTWNMPTAGELRNPIFAMTDSDRLVFGRGFEGNLEAVAWP 456
+G P + + V I+ N+ G+ K W+ STKELQLASL+ C+ CR LHL V TP RLLA D+P + GTR+PRLRAR V+W++ +A L + I+A+ + F L+AV WP
Sbjct: 20 SGAAPTNSRFLDVVIVVLNQACGDG-GQKHWFASTKELQLASLQLCEACRDAAALHLRVNTSTPLRLLAPADSPSDGSEE--GTRVPRLRAREVSWDLTSADRLSSSIYALASAQVFTFSDSLNAVLDAVVWP 149 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11214.1573.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11214.1573.1 >prot_Ecto-sp8_S_contig11214.1573.1 ID=prot_Ecto-sp8_S_contig11214.1573.1|Name=mRNA_Ecto-sp8_S_contig11214.1573.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=425bp MSDTRSVMERDAGSGSAGVGPDQNSCVKVFIIAFNEMWGETWDAKGWYTSback to top mRNA from alignment at Ecto-sp8_S_contig11214:1719..5448- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11214.1573.1 ID=mRNA_Ecto-sp8_S_contig11214.1573.1|Name=mRNA_Ecto-sp8_S_contig11214.1573.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3730bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11214:1719..5448- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11214:1719..5448- >mRNA_Ecto-sp8_S_contig11214.1573.1 ID=mRNA_Ecto-sp8_S_contig11214.1573.1|Name=mRNA_Ecto-sp8_S_contig11214.1573.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1275bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11214:1719..5448- (Ectocarpus species8 EcLAC_412)back to top |