mRNA_Ecto-sp8_S_contig112.1557.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig112.1557.1 vs. uniprot
Match: D7FQ39_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ39_ECTSI) HSP 1 Score: 417 bits (1072), Expect = 2.560e-134 Identity = 205/210 (97.62%), Postives = 207/210 (98.57%), Query Frame = 1
Query: 955 MMRYLEMAYWTMESMGQPLPDAVASTVRWREDATPHLVTDNQVAEEAKYGKMYVRGFDRQQRPIIHYRPGLEKSFDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFTTMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKDKIAFLSKKEAEATLTGLIDPSALPASLPGGLDGFTYSNEEYLKL 1584
MMRYLEMAYWTMESMGQPLPDAVASTVRWREDATPHL+TDNQVAEEAKYGKMYVRG DRQQRPIIHYRPGLEKSFDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAF TMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTK+KIAFLSKKEAEATLTGLIDPSALPASLPGGLD FTYSNEEYLKL
Sbjct: 1 MMRYLEMAYWTMESMGQPLPDAVASTVRWREDATPHLLTDNQVAEEAKYGKMYVRGLDRQQRPIIHYRPGLEKSFDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKEKIAFLSKKEAEATLTGLIDPSALPASLPGGLDDFTYSNEEYLKL 210
BLAST of mRNA_Ecto-sp8_S_contig112.1557.1 vs. uniprot
Match: A0A6H5KVL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL1_9PHAE) HSP 1 Score: 384 bits (986), Expect = 1.750e-119 Identity = 252/348 (72.41%), Postives = 260/348 (74.71%), Query Frame = 1
Query: 1 MYPAKGDDRSSTSTISRSSSSDSSFDDDSGHAAAVQLPSVADDKQRCSTPCPGWWPCAPGGRRMAVLALVCAIAAAASVSRCGGCLVGLRKANGGSTSCPRGNKREEAEPNASIEVEAGIRPWHRKGIVGKVRKGHGDWRRRRKLKLELENNGRDSKAGSKVRTKRKRXXXXXXXXXXXXXXXXXX-SDGRRLLQQAPGMFVPSPEAAKRRAKDDAGGAKE-------------------------VHSRKPPKGRKAAARQEKAPEGGTAKGKRRALQALWGRVVARLGGGRXXXXXXXDREGEEDARRAGLLKELRRKVEERYGSEFWGRAKAAGHELDDELMMRY 966
MYPAKGDDRSSTSTISRS QLPSV QR STPC GWWP PGGRRMAVLALVCAIAAAAS SRCGGCLVGLRKANGGSTSCPRGNKREEAE NAS+EVE GIRPWHRKG++GK+R+GH DWRRR XXXXXXXXXXXXXXXXX SDGRRLLQQAPGMFVPSPEAAKRRAKDD GGAKE VHSRKP K RKAA+RQEKA EGGTAKGKRRALQALWGRVVARLGGGR XXXXXXDR GEEDARRAGLLKELRRKVEERYGSEFWGRAKAAGHELDDEL+MR+
Sbjct: 1 MYPAKGDDRSSTSTISRSXXXXXXXXXXXXXXXXXQLPSVDXXXQRSSTPCRGWWPRPPGGRRMAVLALVCAIAAAASFSRCGGCLVGLRKANGGSTSCPRGNKREEAEANASLEVETGIRPWHRKGVLGKLREGHDDWRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSDGRRLLQQAPGMFVPSPEAAKRRAKDDTGGAKEXXXXXXXXXXXXXXXXXXXXXXXXXVHSRKPSKERKAASRQEKATEGGTAKGKRRALQALWGRVVARLGGGRGXXXXXXDRGGEEDARRAGLLKELRRKVEERYGSEFWGRAKAAGHELDDELLMRW 348
BLAST of mRNA_Ecto-sp8_S_contig112.1557.1 vs. uniprot
Match: A0A6H5JFY3_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY3_9PHAE) HSP 1 Score: 257 bits (656), Expect = 7.490e-76 Identity = 128/135 (94.81%), Postives = 131/135 (97.04%), Query Frame = 1
Query: 1180 DTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFTTMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKDKIAFLSKKEAEATLTGLIDPSALPASLPGGLDGFTYSNEEYLKL 1584
D +GLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAF TMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTK+KIAFLSKKEAEATLTGLIDPSALPASLPGGLD FTYSN+EYLKL
Sbjct: 15 DILEGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKEKIAFLSKKEAEATLTGLIDPSALPASLPGGLDDFTYSNKEYLKL 149
BLAST of mRNA_Ecto-sp8_S_contig112.1557.1 vs. uniprot
Match: A0A835Z968_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z968_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.220e-39 Identity = 101/278 (36.33%), Postives = 144/278 (51.80%), Query Frame = 1
Query: 862 LKELRRKVEERYGSEFWGRAKAAGHELDDELMMRYLEMAYWTMESMGQPLP---DAVASTVRWREDATPHLVTDNQVAEEAKYGKMYVRGFDRQQRPIIHYRPGLEKS-FDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLK-----------------------------------TAFTTMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKDKIAFLSKKEAEATLTGLIDPSALPASLPGGLDGFTYSNEEYL 1578
L++L+ +V+ R E A+ HEL + ++R+LE++YW +E G P D +A TV WR+ + V A GK+YVRG DRQ RP+IH+RP E + FD L+ +TLERA ++P GQ++FAVV DC+GF PP+ +K + M HYPMRLGYV IVNAG + F WK+I+++L+ERT KI+FL L + P ALP ++ G D +TY ++YL
Sbjct: 98 LRQLKEEVDAR--PELRRHAREVQHELTELTLLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGGPATCDALLSELPPQALPDTICG-TDTWTYDVDQYL 372
BLAST of mRNA_Ecto-sp8_S_contig112.1557.1 vs. uniprot
Match: A0A835ZL56_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL56_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.980e-33 Identity = 75/223 (33.63%), Postives = 117/223 (52.47%), Query Frame = 1
Query: 952 LMMRYLEMAYWTMESMGQPLPDAVASTVRWREDATPHLVTDNQVAEEAK-------------YGKMYVRGFDRQQRPIIHYRPG--LEKSFDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFTTMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKDKIAFLSKKEAEATLTGLIDPSALPASLPGGLDGFTYSNEEY 1575
+++R++E A+W +E G P+ + TV WRE H +T + A+ G + V G DR RPI+H R G K + E+ L +T+ERA + +G + +VADC GFG + PPLP L+ F + RHYPMRLG++++ NA + W++ S ++ RTKDKI F +++ A + + P+ LP +L GG + Y Y
Sbjct: 1 MLVRFIEGAFWNLEHKGVPVSALIEETVAWRESVGAHAITPASLGARARGRDIVGPLAPALRAGAIVVHGRDRDGRPIMHVRLGALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTHLPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKIVF-AREGDRALVARYVAPAELPRAL-GGASAYEYDAARY 221
BLAST of mRNA_Ecto-sp8_S_contig112.1557.1 vs. uniprot
Match: D8LQH2_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQH2_ECTSI) HSP 1 Score: 144 bits (364), Expect = 2.520e-33 Identity = 80/240 (33.33%), Postives = 125/240 (52.08%), Query Frame = 1
Query: 856 GLLKELRRKVEERYGSEFWGRAKAAGHELDDELMMRYLEMAYWTMESMGQPLPDAVASTVRWREDATPHLVTDNQVAEEAKYGKMYVRGFDRQQRPIIHYRPGLEKSFDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFTTMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKDKIAFLSKKEAEATLTGLIDPSALPASLPGGLDGFTYSNEEY 1575
G+L+ELR +V + G E RAK HELD R+LE A+W +E G+ + D + ++ WRE + V ++ G + V+G D +RP++++RP L+ + + L+ + LERA +P+ Q+ +V DC G G + PP+ +K F + HYPMRLG+V+ N G + WK++S +L+ RTK K+ + T I PS L S GG + Y Y
Sbjct: 174 GVLQELRNEVAAKPGLE--RRAKKVHHELDTVAFGRFLEAAFWALEHDGKRVSDFIEESIAWREKIGADRLRKEDVVDQGCRGAIIVKGHDLSRRPVVYFRPALDGRMEGDGNSKLMIYNLERAIRLMPRNSWQYTIVIDCEGMGLKQLPPVTYMKKMFKLLSHHYPMRLGHVLFTNVGPSVMLCWKVVSPLLQARTKAKMHLIPSTALGQTAK-YIHPSQL-LSFAGGKSTWQYDPAVY 409
BLAST of mRNA_Ecto-sp8_S_contig112.1557.1 vs. uniprot
Match: A0A7S2XX21_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX21_9STRA) HSP 1 Score: 133 bits (334), Expect = 5.410e-32 Identity = 67/164 (40.85%), Postives = 99/164 (60.37%), Query Frame = 1
Query: 1063 LVTDNQVAEEAKYGKMYVRGFDRQQRPIIHYRPGLEKSFDTEKGLNLLFHTLERAKGSLP--KGQTQFAVVADCSGFGPSKTPPLPMLKTAFTTMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKDKIAFLSKKEAEATLTGLIDPSALPASLPGGLD 1548
+ D + EA GKMY G R P++++RP LE D E L+LL +TLERA S+ +G +F V+ DC+GFG S+ PP+ ++ F T+ +YPMRLG V +VNAG P+ +WK++S +L ERT+ K+ FLS+KE + ++P L G L+
Sbjct: 8 MKVDAGMRREAAGGKMYTLGRGRSGEPLVYFRPALETGSDYEASLHLLVYTLERAIKSMDSKRGVEKFIVLVDCTGFGLSRAPPISLVTGQFKTLMHNYPMRLGKVFVVNAGTPMNMLWKIVSPILNERTRHKVFFLSEKEISQHIPQYVNPDVLEVEFGGKLE 171
BLAST of mRNA_Ecto-sp8_S_contig112.1557.1 vs. uniprot
Match: UPI001CFD545C (uncharacterized protein n=2 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD545C) HSP 1 Score: 112 bits (279), Expect = 3.640e-23 Identity = 59/181 (32.60%), Postives = 96/181 (53.04%), Query Frame = 1
Query: 1015 DAVASTVRWREDATPHLVTDNQVAEEAKYGKMYVRGFDRQQRPIIHYRPGLEKSFDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFTTMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKDKIAFLSKKEAEATL---TGLIDPSALPASLPGGLD 1548
D + ST+ W ED P+L+T +++ +EA GK++ RGFD+ RP+++ PG E ++D E + LL ++L A +P G +Q + + G+ P L + K + + H+P RLG +IVN ++ WKLIS + TK+KI F + + E + + LP G LD
Sbjct: 88 DLLKSTLEWLEDFKPYLITASKMTKEAATGKIFCRGFDKFNRPVVYMSPGKENTYDGEGNIQLLVYSLFTAVARMPPGVSQMTWICNFEGYTMKNAPSLSVCKQTVSILSSHFPERLGVALIVNPPKVFSWFWKLISPFIPPVTKEKIKFCNSSKKEDMIEFFSPYFTLDMLPKDFNGNLD 268
BLAST of mRNA_Ecto-sp8_S_contig112.1557.1 vs. uniprot
Match: A0A6A5C3G4_NAEFO (CRAL-TRIO domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C3G4_NAEFO) HSP 1 Score: 108 bits (269), Expect = 1.040e-21 Identity = 70/223 (31.39%), Postives = 109/223 (48.88%), Query Frame = 1
Query: 940 LDDELMMRYLEMAYWTMESMGQPLPDAVASTVRWREDATPHLVTDNQVAEEAKYGKMYVRGFDRQQRPIIHYRPGLEKSFDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFTTMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKDKIAFLSKKEAE-ATLTGLIDPSALPASLPGGLDGFTYSNEEYLKL*CGNAAE 1605
LD+ ++R+L + + + + + + WR P +T +V EA GK++ RGFD+ RPI++ P E S D EK + LL +TLERA ++P+G Q + D +G+ + PL + K + YP RLG +V+ WK IS + TK+KI F++ K+ E A + G A + GG FTY + K+ GN E
Sbjct: 66 LDEAALIRFLRARDYDINKAEK----LMNTCLEWRRSFKPDEITAEEVDSEASSGKLFQRGFDKMNRPIVYMFPARENSTDYEKNIKLLVYTLERAVDAMPEGVEQMCWIIDFNGYSTRNSLPLSVAKQTLNILNDCYPERLGACFMVDTPFIFNIFWKAISPFINPVTKNKIHFVNGKDIEKAKIFGKYIDLAQIDTTWGGTSTFTYDH----KIFWGNVME 280
BLAST of mRNA_Ecto-sp8_S_contig112.1557.1 vs. uniprot
Match: D2V0F0_NAEGR (CRAL-TRIO domain-containing protein n=2 Tax=Naegleria gruberi TaxID=5762 RepID=D2V0F0_NAEGR) HSP 1 Score: 107 bits (267), Expect = 1.460e-21 Identity = 63/213 (29.58%), Postives = 107/213 (50.23%), Query Frame = 1
Query: 940 LDDELMMRYLEMAYWTMESMGQPLPDAVASTVRWREDATPHLVTDNQVAEEAKYGKMYVRGFDRQQRPIIHYRPGLEKSFDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFTTMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKDKIAFLSKKEAE-ATLTGLIDPSALPASLPGGLDGFTYSNEEY 1575
LD+ ++R+L + + + + S + WR P +T ++ +E+ GK++ RGFD+ RPII+ P E S D EK + LL +T+ERA ++P+G Q + D +G+ PP + K + + YP RLG +V+ W+ IS + TK+KI F++ KE+E A + G A + GG F + + ++
Sbjct: 57 LDEPSLLRFLRARDYDLNKAEK----LMNSCLEWRRTFKPDEITAKELEDESSSGKLFQRGFDKNNRPIIYMFPARENSTDYEKNIKLLVYTMERAVDAMPEGVEQMTWIIDFNGYTTRNAPPFSVAKQTLSILNECYPERLGACFMVDTPFIFNIFWRAISPFINPVTKNKIHFVNGKESEKAKIFGKHIDLAQIDTTWGGTSTFVFEHSDF 265 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig112.1557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig112.1557.1 >prot_Ecto-sp8_S_contig112.1557.1 ID=prot_Ecto-sp8_S_contig112.1557.1|Name=mRNA_Ecto-sp8_S_contig112.1557.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=529bp MYPAKGDDRSSTSTISRSSSSDSSFDDDSGHAAAVQLPSVADDKQRCSTPback to top mRNA from alignment at Ecto-sp8_S_contig112:2411..11780+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig112.1557.1 ID=mRNA_Ecto-sp8_S_contig112.1557.1|Name=mRNA_Ecto-sp8_S_contig112.1557.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=9370bp|location=Sequence derived from alignment at Ecto-sp8_S_contig112:2411..11780+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig112:2411..11780+ >mRNA_Ecto-sp8_S_contig112.1557.1 ID=mRNA_Ecto-sp8_S_contig112.1557.1|Name=mRNA_Ecto-sp8_S_contig112.1557.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1587bp|location=Sequence derived from alignment at Ecto-sp8_S_contig112:2411..11780+ (Ectocarpus species8 EcLAC_412)back to top |