mRNA_Ecto-sp8_S_contig11173.1541.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11173.1541.1 vs. uniprot
Match: D8LGA2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA2_ECTSI) HSP 1 Score: 634 bits (1636), Expect = 1.740e-225 Identity = 318/357 (89.08%), Postives = 324/357 (90.76%), Query Frame = 1
Query: 1 QFTDTTKPYVTYYVLDKNGKLDRQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQAPFVFDETAGSRMGILRLDASDSSEMRWFDMPQTYCAFHVLNAWEETMEQTGGLGGVAPNTSSVIKIHTCDTKHLDMDFRKAAHGLDQDSLPFLHTVILNLDTGEVIRHSVLPEKPFSEGMDFPQLRRSLVGRKNRFGYCTAFNSKGDAAAELKVDLQAAKPELAQVGRIDYEDGFVGGECIFIPSKPDDHAGHDDDSDGDGEPEGGEDDGYLATFVSRKDGTGNSGETKFIGKWKHGLNISSLASAPTKRLRVFNAKTMSSEPVAVVKLPARVPAGFHAIFVSEADLAKQQK 1071
QFTD+TKPYVTYYVLDKNGKL+RQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQ PFVFDETAGSRMGILRLDASDSSEMRWFDMPQ Y AFHVLNAWEETMEQTGG GGVAPNTSSVIKIHTCDTKHLDMDFRKAAHG+DQDSLPFLHTVILNLDTGEVIR+SVLPEKPFSEGMDFPQLRRSLVGRKNRFGYCT FNSKGDAAAELKVDLQAAKPELAQVGRIDYEDGFVGGECIFIPSKPDDHAGHD DSD DGE EGGEDDGYLATFVSRKDGTGNS LRVFNAKTMSSEPVA+VKLPARVPAGFHAIFVSEADLAKQQ+
Sbjct: 216 QFTDSTKPYVTYYVLDKNGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQIPFVFDETAGSRMGILRLDASDSSEMRWFDMPQAYFAFHVLNAWEETMEQTGGPGGVAPNTSSVIKIHTCDTKHLDMDFRKAAHGVDQDSLPFLHTVILNLDTGEVIRYSVLPEKPFSEGMDFPQLRRSLVGRKNRFGYCTTFNSKGDAAAELKVDLQAAKPELAQVGRIDYEDGFVGGECIFIPSKPDDHAGHDGDSDSDGELEGGEDDGYLATFVSRKDGTGNS------------------------ELRVFNAKTMSSEPVAIVKLPARVPAGFHAIFVSEADLAKQQQ 548
BLAST of mRNA_Ecto-sp8_S_contig11173.1541.1 vs. uniprot
Match: D8LGA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA3_ECTSI) HSP 1 Score: 520 bits (1340), Expect = 1.300e-180 Identity = 264/358 (73.74%), Postives = 283/358 (79.05%), Query Frame = 1
Query: 1 QFTDTTKPYVTYYVLDKNGKLDRQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQAPFVFDETAGSRMGILRLDASDSSEMRWFDMPQTYCAFHVLNAWEETMEQTGGLGGVAPNTSSVIKIHTCDTKHLDMDFRKAAHGLDQDSLPFLHTVILNLDTGEVIRHSVLPE-KPFSEGMDFPQLRRSLVGRKNRFGYCTAFNSKGDAAAELKVDLQAAKPELAQVGRIDYEDGFVGGECIFIPSKPDDHAGHDDDSDGDGEPEGGEDDGYLATFVSRKDGTGNSGETKFIGKWKHGLNISSLASAPTKRLRVFNAKTMSSEPVAVVKLPARVPAGFHAIFVSEADLAKQQK 1071
QF D TKPYVTYYVLD NGKL+RQFPIV +KRPIMMHDFAITKNYAVFLDFPLLFKPEL+L G+ P FDETAGSRMG+LRLDASDSSEM WFDMPQTYCA HVLNAWEETME+TGG G+AP +SVIKIHTCD L MDFRK +HG+DQD L LHTV LNLDTGEV R SVLP + SEGMDFPQLRRSLVGRKNRFGYCT + KGDA AE K+DLQAA P+ AQVGRIDYEDGFVGGECIFIPSKPDD DGDGE GGEDDGYLATFVSRKDGTG T LRVF+AKTM+SEPVA VKLPARVPAGFHAIFV EA+LA Q++
Sbjct: 216 QFKDNTKPYVTYYVLDTNGKLERQFPIVGIKRPIMMHDFAITKNYAVFLDFPLLFKPELILAGKVPIAFDETAGSRMGVLRLDASDSSEMLWFDMPQTYCALHVLNAWEETMEKTGGPAGIAPTKTSVIKIHTCDISRLTMDFRKLSHGVDQDELAILHTVTLNLDTGEVTRESVLPSSRTLSEGMDFPQLRRSLVGRKNRFGYCTVMDMKGDAIAEAKIDLQAATPKQAQVGRIDYEDGFVGGECIFIPSKPDD-------GDGDGELAGGEDDGYLATFVSRKDGTG------------------------TSELRVFDAKTMNSEPVAAVKLPARVPAGFHAIFVPEAELATQRQ 542
BLAST of mRNA_Ecto-sp8_S_contig11173.1541.1 vs. uniprot
Match: A0A6H5KSQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ0_9PHAE) HSP 1 Score: 460 bits (1184), Expect = 3.780e-157 Identity = 227/293 (77.47%), Postives = 244/293 (83.28%), Query Frame = 1
Query: 1 QFTDTTKPYVTYYVLDKNGKLDRQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQAPFVFDETAGSRMGILRLDASDSSEMRWFDMPQTYCAFHVLNAWEETMEQTGGLGGVAPNTSSVIKIHTCDTKHLDMDFRKAAHGLDQDSLPFLHTVILNLDTGEVIRHSVLPEKP-FSEGMDFPQLRRSLVGRKNRFGYCTAFNSKGDAAAELKVDLQAAKPELAQVGRIDYEDGFVGGECIFIPSKPDDHAGHDDDSDGDGEPEGGEDDGYLATFVSRKDGTGNSGE 876
QF D+ KPYVTYYVLDK+GKL+RQFPIV +KRPIMMHDFAITKNYAVFLD PLLFKPEL+L G+ P FDETAGSRMG+L LDASDSSEM WFDMPQTYCA HVLNAWEETME+TGG GGVAP +SVIKIHTCD L MDFRK + G+DQD L LHTV LNLDTGEV R SVLP +GMDFPQ+RRSLVGRKNRFGYCT + KGDA AE K+DLQAA P AQVGRI+YEDGFVGGECIFIPSKPDD DGDG+PEGGEDDGYLATFVSRKDGTG SGE
Sbjct: 228 QFKDSNKPYVTYYVLDKDGKLERQFPIVGIKRPIMMHDFAITKNYAVFLDLPLLFKPELILAGKVPIAFDETAGSRMGVLLLDASDSSEMLWFDMPQTYCALHVLNAWEETMEKTGGPGGVAPTKTSVIKIHTCDISRLTMDFRKLSLGVDQDELAILHTVTLNLDTGEVTRESVLPSSSTLLQGMDFPQIRRSLVGRKNRFGYCTIMDMKGDAIAEAKIDLQAATPNKAQVGRINYEDGFVGGECIFIPSKPDD-------GDGDGQPEGGEDDGYLATFVSRKDGTGTSGE 513
BLAST of mRNA_Ecto-sp8_S_contig11173.1541.1 vs. uniprot
Match: A0A6H5KGR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGR7_9PHAE) HSP 1 Score: 400 bits (1028), Expect = 6.210e-137 Identity = 208/291 (71.48%), Postives = 213/291 (73.20%), Query Frame = 1
Query: 229 MGILRLDASDSSEMRWFDMPQ----------------------------------------------------------------------TYCAFHVLNAWEETMEQTGGLGGVAPNTSSVIKIHTCDTKHLDMDFRKAAHGLDQDSLPFLHTVILNLDTGEVIRHSVLPEKPFSEGMDFPQLRRSLVGRKNRFGYCTAFNSKGDAAAELKVDLQAAKPELAQVGRIDYEDGFVGGECIFIPSKPDDHAGHDDDSDGDGEPEGGEDDGYLATFVSRKDGTGNSGETKFIG 891
MGILRLDASDSSEMRWFDMPQ TYCAFHVLNAWEETMEQTGG GGVAPNTSSVIKIHTCDTKHLD+DFRKAAHG+DQDSLPFLHTVIL LDTGEVIRHSVLPEKPF EGMDFPQLRRSLVGRKNRFGYCT FNSKGDAAAE+KVDLQAAKPELAQVGRI YEDGFVGGECIFIPSKPDDHAGHD D+DGDGEPEGGEDDGYLATFVSRKDGTGNSGET +G
Sbjct: 1 MGILRLDASDSSEMRWFDMPQGRCYCSIVSISNGTGDLLRATRVEKSDVVDLVSQSLVNESNSVAISSSIVDQTSCCCSVLWLADDGLKPKTYCAFHVLNAWEETMEQTGGPGGVAPNTSSVIKIHTCDTKHLDLDFRKAAHGVDQDSLPFLHTVILKLDTGEVIRHSVLPEKPFVEGMDFPQLRRSLVGRKNRFGYCTTFNSKGDAAAEVKVDLQAAKPELAQVGRIAYEDGFVGGECIFIPSKPDDHAGHDGDNDGDGEPEGGEDDGYLATFVSRKDGTGNSGETNSLG 291
BLAST of mRNA_Ecto-sp8_S_contig11173.1541.1 vs. uniprot
Match: D8LPR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR0_ECTSI) HSP 1 Score: 306 bits (783), Expect = 1.080e-96 Identity = 175/355 (49.30%), Postives = 232/355 (65.35%), Query Frame = 1
Query: 22 PYVTYYVLDKNGKLDRQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQAPFVFDETAGSRMGILRLDASDSSEMRWFDMPQTYCAFHVLNAWEETMEQTGGLGGVAPNTSSVIKIHTCDTKHLDMDFRKAAHGLDQDSLPFLH----TVILNLDTGEVIRHSVLPE-KPFSEGMDFPQLRRSLVGRKNRFGYCTAFNSKGDAAAELKVDLQAAKPELAQVGRIDYEDGFVGGECIFIPSKPDDHAGHDDDSDGDGEPEGGEDDGYLATFVSRKDGTGNSGETKFIGKWKHGLNISSLASAPTKRLRVFNAKTMSSEPVAVVKLPARVPAGFHAIFVSEADLAKQQK 1071
P++T YVLD +GK++RQFP VDV R MHDFAI++NY VFLD PL+FK E +L G+ P V+D+T G+RMG+LRLDA+D+S ++WFDMP+ + FHV+NAWEE +E G ++V+K+ TCD L +D + L+Q++ H T LNL+T + R ++P+ +P +EG+DFPQ+R+SLVGRKNR+GY AF++ G AAA +K+DLQA PE A VGRID+ + +VGGE +F+PS PD G EDDG+L TFVS KDG GNS LRV++AKTMS +PVA VKLPARVP GFHAI ++EADLA Q K
Sbjct: 224 PFLTMYVLDADGKIERQFP-VDVGRATAMHDFAISENYCVFLDVPLVFKGENLLKGKFPLVYDDTLGARMGVLRLDATDASGIQWFDMPECFMTFHVVNAWEEQVEANG-------TATTVLKVVTCDMFELSLD----QNDLNQETTVGQHARPYTTTLNLETSKATRACLVPQSQPPTEGLDFPQIRKSLVGRKNRYGYFIAFDAGGLAAALVKIDLQAT-PETAVVGRIDHGE-WVGGEGLFVPSNPD--------------GVGDEDDGFLVTFVSPKDG-GNS------------------------ELRVWDAKTMSPDPVASVKLPARVPLGFHAIHITEADLATQTK 525
BLAST of mRNA_Ecto-sp8_S_contig11173.1541.1 vs. uniprot
Match: A0A061S7M1_9CHLO (Carotenoid cleavage dioxygenase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S7M1_9CHLO) HSP 1 Score: 188 bits (477), Expect = 2.490e-51 Identity = 126/357 (35.29%), Postives = 176/357 (49.30%), Query Frame = 1
Query: 22 PYVTYYVLDKNGKLDRQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLT-GQAPFVFDETAGSRMGILRLDASDSSE-MRWFDMPQTYCAFHVLNAWEETMEQTGGLGGVAPNTSSVIKIHTCDTKHLDMDFRKAAHGLDQDSLPFLHTVILNLDTGEVIRHSVLPEKPFSEGMDFPQLRRSLVGRKNRFGYCTAFNS--KGDAAAE--LKVDLQAAKPEL---AQVGRIDYEDGFVGGECIFIPSKPDDHAGHDDDSDGDGEPEGGEDDGYLATFVSRKDGTGNSGETKFIGKWKHGLNISSLASAPTKRLRVFNAKTMSSEPVAVVKLPARVPAGFHAIFVSEADLAKQ 1065
PY TY V +G L +Q PI V +P+MMHDFA+T+ +A+F+D PL+F P +M+ G PF FDE G R G+ R DA + E ++WF P FHV NAW++ + + C + LD+ + +D PFL + + TGE + + +FPQ+++SLVGRK R+ + ++ KGDA + K DL A+ P A G I + +G GGE IF+P G P+ EDDGYL T+V + G N S VF+AKTMSSEP+A V+LP RVP GFH +F+ E D+ KQ
Sbjct: 238 PYCTYGVAGPDGALKKQIPIT-VPKPVMMHDFAVTEAHAIFIDTPLVFDPSVMVREGTLPFAFDEGHGIRFGLRRHDAPEGEEAVQWFSSPPCMI-FHVANAWDD---------------GEKVHLVACAMRTLDLSVLSTKRAMTEDMKPFLTRFVFDTRTGETV-----VTRLSDCAAEFPQIKQSLVGRKCRYAFAARYHESPKGDAGFDGICKFDLDASGPRDGHDACSGAICFGEGRYGGEAIFVPK---------------GSPKS-EDDGYLLTYV-----------------YDEGRNKSDFV--------VFDAKTMSSEPIAKVQLPCRVPYGFHGLFMDEDDMKKQ 531
BLAST of mRNA_Ecto-sp8_S_contig11173.1541.1 vs. uniprot
Match: A0A833VHM6_9POAL (Carotenoid 9,10(9',10')-cleavage dioxygenase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VHM6_9POAL) HSP 1 Score: 188 bits (477), Expect = 3.260e-51 Identity = 128/360 (35.56%), Postives = 182/360 (50.56%), Query Frame = 1
Query: 22 PYVTYYVLDKNGKLDRQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQAPFVFDETAGSRMGILRLDASDSSEMRWFDMPQTYCAFHVLNAWEETMEQTGGLGGVAPNTSSVIKIHTCDTKHLDMDFRKAAHGLDQDSLPF----LHTVILNLDTGEVIRHSVLPEKPFSEGMDFPQLRRSLVGRKNRFGYCTAFNSKGDAAAELKVDLQA----AKPELAQVGRI----DYEDGFVGGECIFIPSKPDDHAGHDDDSDGDGEPEGGEDDGYLATFVSRKDGTGNSGETKFIGKWKHGLNISSLASAPTKRLRVFNAKTMSSEPVAVVKLPARVPAGFHAIFVSEADLAKQ 1065
PYVTY V++K+G + PI + P+MMHDFAIT+NY++F+D PL F+P+ M+ G+ F FD+T +R G+L A D ++RWF++P + FH NAWE E + + TC ++ D+D +G ++ L L+ + N+ TGE + +K +DFP++ S GRK R+ YCT +S +K DL+A +K +L G + D G G E IF+P + AG G EDDGYL FV + TG SG + V +AKTM++EPVAVV+LPARVP GFHA FV+E L Q
Sbjct: 250 PYVTYRVINKDGVMLDPVPIT-IPAPVMMHDFAITENYSIFMDLPLYFRPKDMVKGKLIFTFDDTVKARFGVLPRYAKDDHDIRWFELPNCFI-FHNANAWEVGDE---------------VVLVTCRLQNPDLD---QVNGATKEKLENFTNELYEMRFNMKTGEASQ-----KKLSVSAVDFPRINESYTGRKQRYVYCTILDSIAKVKGLIKFDLEAEPDSSKEKLEVGGNVTGIFDLGPGRYGSEAIFVPRQ----AG----------VTGDEDDGYLIFFV-HDENTGKSG------------------------VNVIDAKTMAAEPVAVVELPARVPYGFHAFFVTEEQLKSQ 545
BLAST of mRNA_Ecto-sp8_S_contig11173.1541.1 vs. uniprot
Match: A0A061R547_9CHLO (Carotenoid cleavage dioxygenase 1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R547_9CHLO) HSP 1 Score: 184 bits (467), Expect = 5.190e-51 Identity = 124/354 (35.03%), Postives = 174/354 (49.15%), Query Frame = 1
Query: 22 PYVTYYVLDKNGKLDRQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLT-GQAPFVFDETAGSRMGILRLDASDSSE-MRWFDMPQTYCAFHVLNAWEETMEQTGGLGGVAPNTSSVIKIHTCDTKHLDMDFRKAAHGLDQDSLPFLHTVILNLDTGEVIRHSVLPEKPFSEGMDFPQLRRSLVGRKNRFGYCTAFNS--KGDAAAE--LKVDLQAAKPEL---AQVGRIDYEDGFVGGECIFIPSKPDDHAGHDDDSDGDGEPEGGEDDGYLATFVSRKDGTGNSGETKFIGKWKHGLNISSLASAPTKRLRVFNAKTMSSEPVAVVKLPARVPAGFHAIFVSEADL 1056
PY TY V +G L +Q PI V +P+MMHDFA+T+ +A+F+D PL+F P +M+ G PF FDE G R G+ R DA + E ++WF P FHV NAW++ + + C + LD+ + +D PFL + + TGE + + +FPQ+++SLVGRK R+ + ++ KGDA + K DL A+ P A G I + +G GGE IF+P G P+ EDDGYL T+V + G N S VF+AKTMSSEP+A V+LP RVP GFH +F+ E D+
Sbjct: 119 PYCTYGVAGPDGALKKQIPIT-VPKPVMMHDFAVTEAHAIFIDTPLVFDPSVMVREGTLPFAFDEGHGIRFGLRRHDAPEGEEAVQWFSSPPCMI-FHVANAWDD---------------GEKVHLVACVMRTLDLSVLSTKRAMTEDMKPFLTRFVFDTRTGETV-----VTRLSDCAAEFPQIKQSLVGRKCRYAFAARYHESPKGDAGFDGICKFDLDASGPRDGHDACSGAICFGEGRYGGEAIFVPK---------------GSPKS-EDDGYLLTYV-----------------YDEGRNKSDFV--------VFDAKTMSSEPIAKVQLPCRVPYGFHGLFMDEDDM 409
BLAST of mRNA_Ecto-sp8_S_contig11173.1541.1 vs. uniprot
Match: UPI0009F27F7E (carotenoid 9,10(9',10')-cleavage dioxygenase 1 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F27F7E) HSP 1 Score: 185 bits (470), Expect = 4.250e-50 Identity = 126/365 (34.52%), Postives = 177/365 (48.49%), Query Frame = 1
Query: 16 TKPYVTYYVLDKNGKLDRQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQAPFVFDETAGSRMGILRLDASDSSEMRWFDMPQTYCAFHVLNAWEETMEQTGGLGGVAPNTSSVIKIHTCDTKHLDMDFRKAAHGLDQDSLPF----LHTVILNLDTGEVIRHSVLPEKPFSEGMDFPQLRRSLVGRKNRFGYCTAFNSKGDAAAELKVDLQAAKPELAQ---------VGRIDYEDGFVGGECIFIPSKPDDHAGHDDDSDGDGEPEGGEDDGYLATFVSRKDGTGNSGETKFIGKWKHGLNISSLASAPTKRLRVFNAKTMSSEPVAVVKLPARVPAGFHAIFVSEADLAKQQK 1071
T PYVTY V+ K+G + PI + PIMMHDFAIT+NYA+F+D PL F+P+ M+ G+ F FD T ++ G+L A D +RWFD+P + FH NAWEE E + + TC ++ D+D +G +D L L+ + NL TG + + + +DFP++ + GRK R+ Y T +S +K DL A KPE + +G D G G E +F+P + EDDGYL FV + ++GE+K + V +AKTMS EPVAVV LP RVP GFHA FV+E + +QQ+
Sbjct: 261 TSPYVTYRVITKDGVMHNPVPIT-IPEPIMMHDFAITENYAIFMDLPLYFRPKEMVKGKLIFTFDPTKRAKFGVLPRYAKDEQLIRWFDLPNCFI-FHNANAWEEGDE---------------VVLITCRLENPDLDM---VNGAVKDKLENFTNQLYEMRFNLKTGAATQKELS-----APAVDFPRINENYTGRKQRYVYGTILDSVAKVKGIVKFDLHA-KPEAGKKNLEVGGNVLGIFDLGPGIFGSEAVFVPREAGIRIE--------------EDDGYLIFFVHDE----STGESK---------------------VNVIDAKTMSPEPVAVVDLPCRVPYGFHAFFVNEEQIQQQQQ 560
BLAST of mRNA_Ecto-sp8_S_contig11173.1541.1 vs. uniprot
Match: A0A804II93_MUSAM ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804II93_MUSAM) HSP 1 Score: 184 bits (468), Expect = 6.180e-50 Identity = 128/362 (35.36%), Postives = 179/362 (49.45%), Query Frame = 1
Query: 22 PYVTYYVLDKNGKLDRQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQAPFVFDETAGSRMGILRLDASDSSEMRWFDMPQTYCAFHVLNAWEETMEQTGGLGGVAPNTSSVIKIHTCDTKHLDMDFRKAAHGLDQDSLPF----LHTVILNLDTGEVIRHSVLPEKPFS-EGMDFPQLRRSLVGRKNRFGYCTAFNSKGDAAAELKVDLQAAKPELAQV---------GRIDYEDGFVGGECIFIPSKPDDHAGHDDDSDGDGEPEGGEDDGYLATFVSRKDGTGNSGETKFIGKWKHGLNISSLASAPTKRLRVFNAKTMSSEPVAVVKLPARVPAGFHAIFVSEADLAKQ 1065
PYVTY V+ K+G + PI + P+MMHDFAIT+NYA+F+D PL F+P+ M+ G+ F FD T SR G+L A D +RWF++P Y FH NAWEE E + + TC ++ D+D +G +D L L+ + N+ +G +K S +DFP++ S GRK R+ YCT +S +K DL A +PEL + G D G G E +F+P KP + EDDGYL FV + N+G+++ + V +AKTMS++PVAVV+LP RVP GFHA FV+E L +Q
Sbjct: 249 PYVTYRVITKDGVMLDPVPIT-IPDPVMMHDFAITENYAIFMDLPLYFQPKEMVKGKLIFNFDATKKSRFGVLPRYAKDELHIRWFELPNCYI-FHNANAWEEGDE---------------VVLITCRLQNPDLD---QVNGAVKDHLENFTNELYEMRFNMKSGAA------SQKQLSVSAVDFPRINESYTGRKQRYVYCTILDSIAKVKGIIKFDLHA-EPELGKKKLEVGGNVKGIFDLGPGRYGSEAVFVPHKPGFSSE--------------EDDGYLIFFVHDE----NTGKSE---------------------VNVIDAKTMSADPVAVVELPTRVPYGFHAFFVTEEQLQRQ 544 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11173.1541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11173.1541.1 >prot_Ecto-sp8_S_contig11173.1541.1 ID=prot_Ecto-sp8_S_contig11173.1541.1|Name=mRNA_Ecto-sp8_S_contig11173.1541.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=358bp QFTDTTKPYVTYYVLDKNGKLDRQFPIVDVKRPIMMHDFAITKNYAVFLDback to top mRNA from alignment at Ecto-sp8_S_contig11173:78..5374+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11173.1541.1 ID=mRNA_Ecto-sp8_S_contig11173.1541.1|Name=mRNA_Ecto-sp8_S_contig11173.1541.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5297bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11173:78..5374+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11173:78..5374+ >mRNA_Ecto-sp8_S_contig11173.1541.1 ID=mRNA_Ecto-sp8_S_contig11173.1541.1|Name=mRNA_Ecto-sp8_S_contig11173.1541.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1074bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11173:78..5374+ (Ectocarpus species8 EcLAC_412)back to top |