mRNA_Ecto-sp8_S_contig11071.1445.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11071.1445.1 vs. uniprot
Match: D7G6J2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J2_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 3.150e-23 Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 1
Query: 1 VQVGQDGRVYVAVKYPSISELWPEIYNNRSIRVVQVVDAPAVLR 132
+QVGQDGRVYVAVKYPSISELWPEIYNNRSIRVVQVVDAPAVLR
Sbjct: 1 MQVGQDGRVYVAVKYPSISELWPEIYNNRSIRVVQVVDAPAVLR 44
BLAST of mRNA_Ecto-sp8_S_contig11071.1445.1 vs. uniprot
Match: A0A6H5L4C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C2_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 2.370e-13 Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 1
Query: 1 VQVGQDGRVYVAVKYPSISELWPEIYNNRSIRVVQV 108
+QV +DGRVYVAVK PSISELWPEIYNNRSIRVVQV
Sbjct: 70 MQVRKDGRVYVAVKCPSISELWPEIYNNRSIRVVQV 105
BLAST of mRNA_Ecto-sp8_S_contig11071.1445.1 vs. uniprot
Match: A0A6H5L3B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3B8_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 2.930e-10 Identity = 26/43 (60.47%), Postives = 36/43 (83.72%), Query Frame = 1
Query: 1 VQVGQDGRVYVAVKYPSISELWPEIYNNRSIRVVQVVDAPAVL 129
+QVG+D RVYVAVK+P+++ELWPEIY N ++ VVQV P++L
Sbjct: 83 MQVGEDERVYVAVKFPTMNELWPEIYQNVAVEVVQVRLFPSIL 125
BLAST of mRNA_Ecto-sp8_S_contig11071.1445.1 vs. uniprot
Match: D7G6J1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J1_ECTSI) HSP 1 Score: 58.9 bits (141), Expect = 1.170e-9 Identity = 25/36 (69.44%), Postives = 32/36 (88.89%), Query Frame = 1
Query: 1 VQVGQDGRVYVAVKYPSISELWPEIYNNRSIRVVQV 108
+QVG+D RVYVAVKYP+++ELWPEIY N ++ VVQV
Sbjct: 74 MQVGEDERVYVAVKYPTMNELWPEIYQNVAVEVVQV 109
BLAST of mRNA_Ecto-sp8_S_contig11071.1445.1 vs. uniprot
Match: D8LCL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL1_ECTSI) HSP 1 Score: 56.2 bits (134), Expect = 5.330e-8 Identity = 23/36 (63.89%), Postives = 32/36 (88.89%), Query Frame = 1
Query: 1 VQVGQDGRVYVAVKYPSISELWPEIYNNRSIRVVQV 108
+Q G +GRVY AV+YPS++ELWPE+YN+ +IRVV+V
Sbjct: 277 LQAGSNGRVYGAVQYPSMAELWPEVYNSTAIRVVKV 312
BLAST of mRNA_Ecto-sp8_S_contig11071.1445.1 vs. uniprot
Match: A0A6H5JZ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ42_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 1.020e-7 Identity = 22/35 (62.86%), Postives = 32/35 (91.43%), Query Frame = 1
Query: 4 QVGQDGRVYVAVKYPSISELWPEIYNNRSIRVVQV 108
+ G +GRVY AV+YPS++ELWPE+YN+++IRVV+V
Sbjct: 362 RAGSNGRVYGAVQYPSMAELWPEVYNSKAIRVVKV 396
BLAST of mRNA_Ecto-sp8_S_contig11071.1445.1 vs. uniprot
Match: A0A6H5JPU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU4_9PHAE) HSP 1 Score: 52.4 bits (124), Expect = 1.250e-6 Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 1
Query: 10 GQDGRVYVAVKYPSISELWPEIYNNRSIRVVQVVDA 117
G +GRVY A++YPS+SELWPEI ++RVVQV DA
Sbjct: 584 GGNGRVYGALRYPSMSELWPEICRTSAVRVVQVEDA 619
BLAST of mRNA_Ecto-sp8_S_contig11071.1445.1 vs. uniprot
Match: D8LCJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ7_ECTSI) HSP 1 Score: 51.6 bits (122), Expect = 2.330e-6 Identity = 22/36 (61.11%), Postives = 30/36 (83.33%), Query Frame = 1
Query: 1 VQVGQDGRVYVAVKYPSISELWPEIYNNRSIRVVQV 108
+Q G +GRVY A++YPS+SELWPEI + ++RVVQV
Sbjct: 544 LQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQV 579
BLAST of mRNA_Ecto-sp8_S_contig11071.1445.1 vs. uniprot
Match: D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI) HSP 1 Score: 50.4 bits (119), Expect = 5.980e-6 Identity = 19/36 (52.78%), Postives = 28/36 (77.78%), Query Frame = 1
Query: 1 VQVGQDGRVYVAVKYPSISELWPEIYNNRSIRVVQV 108
+Q+G +GR Y V YPS+ E+WPE+Y+ +IRVV+V
Sbjct: 449 IQLGSNGRAYAGVFYPSMQEIWPELYSTSNIRVVEV 484
BLAST of mRNA_Ecto-sp8_S_contig11071.1445.1 vs. uniprot
Match: D7G7N4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N4_ECTSI) HSP 1 Score: 47.0 bits (110), Expect = 6.280e-5 Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 1
Query: 1 VQVGQDGRVYVAVKYPSISELWPEIYNNRSIRVVQVVDAPAVL 129
+QV DGR Y V YPS+ E+WPE+Y +R V+V A VL
Sbjct: 121 IQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDVAVEVL 163 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11071.1445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11071.1445.1 >prot_Ecto-sp8_S_contig11071.1445.1 ID=prot_Ecto-sp8_S_contig11071.1445.1|Name=mRNA_Ecto-sp8_S_contig11071.1445.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=45bp VQVGQDGRVYVAVKYPSISELWPEIYNNRSIRVVQVVDAPAVLR*back to top mRNA from alignment at Ecto-sp8_S_contig11071:5880..6198+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11071.1445.1 ID=mRNA_Ecto-sp8_S_contig11071.1445.1|Name=mRNA_Ecto-sp8_S_contig11071.1445.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=319bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11071:5880..6198+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11071:5880..6198+ >mRNA_Ecto-sp8_S_contig11071.1445.1 ID=mRNA_Ecto-sp8_S_contig11071.1445.1|Name=mRNA_Ecto-sp8_S_contig11071.1445.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=135bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11071:5880..6198+ (Ectocarpus species8 EcLAC_412)back to top |