mRNA_Ecto-sp8_S_contig1107.1444.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig1107.1444.1
Unique NamemRNA_Ecto-sp8_S_contig1107.1444.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: A0A6H5L0N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N2_9PHAE)

HSP 1 Score: 781 bits (2017), Expect = 2.870e-268
Identity = 523/575 (90.96%), Postives = 530/575 (92.17%), Query Frame = 1
Query:   16 MVPSLFDGAGHDHVDAAQRGGAGGADVRDLAADSQKLAMAMASKTPDAQYTVQRLLTDHSPAVKGIHESLLAITSKIDLEVKTRREELLALAKMCTLVAAASVVXXXXXXXXXXXXXXXXXXXXQRHGPSGKGTARNATRGPDNXXXXXXXXXX----ERMMRLLDVGPLRECVEALGSLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGIGDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------DGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
            MVPSL DGAGH+HVDAAQRGGAGGADVRDLAADSQKLA+AMASKTPDAQYTVQRL+ DHSPAVKGIHESLLAIT+KIDLEVKTRREELLA+AKMCTLVAAASVV         XXXXXXXXXX QRHGPS KGTAR+AT G DNXXXXXXXXXX    ERMMRLLDVGPLRECVEALG LVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGI DVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXX  EAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVG            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      DGHGG RQRRPLRCLVAVDNVCEAEVVATLA+TGVWVLLTTRD DVI RVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRT LDLAFVG
Sbjct:    1 MVPSLLDGAGHEHVDAAQRGGAGGADVRDLAADSQKLAIAMASKTPDAQYTVQRLVADHSPAVKGIHESLLAITAKIDLEVKTRREELLAVAKMCTLVAAASVVVVSQEHEQEXXXXXXXXXXEQRHGPSWKGTARSATCGSDNXXXXXXXXXXXXCSERMMRLLDVGPLRECVEALGFLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGISDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXX--EAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGPRQRRPLRCLVAVDNVCEAEVVATLAETGVWVLLTTRDWDVIPRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTVLDLAFVG 573          
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 1.770e-47
Identity = 147/405 (36.30%), Postives = 196/405 (48.40%), Query Frame = 1
Query:  496 LDVGPLRECVEALGSLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGIGDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
            +DV PL++CVEA  +   R  +RR  + R   + S K EIA LN  V     ++GLAGI AV +G ++D           +   L + +  L   P+     A VP   P R+SWHV R   + TVL +L     GS+                               VV L G SG+GKT  AAEIVR  EV E FSDG+VWLPVNEG   + RLPSLM +LAR+++EE+G          GS G   S+ +                                                +GH G R    L+CLV  DNV E +VV+ L +TG+WVLL+TRD  V++R  GK VV+  L + DA+ VL+RA+ELP +   P  A +LI+LCGR  +D+AFVG
Sbjct:   89 VDVAPLKDCVEAAKNFAERC-SRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGI-AVLEGKVDD-----------MKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDAL----NGSDRAC----------------------------VVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGA--KKRLPSLMLQLARMVHEEIG----------GSVGRVPSASE-------------------------------------DSATYIKQRLEEGHKGRR----LKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVG 395          
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 1.100e-46
Identity = 144/409 (35.21%), Postives = 196/409 (47.92%), Query Frame = 1
Query:  496 LDVGPLRECVEALGSLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGG---GYGSSPGGIGD-VLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
            +D+ P+ EC+EA G LV R   R + + R   +SS K+EIA +   + D   ++ LAG+ A+ +G   D        G++     + +L   E  + R  K     A++P   P R+SWHV R  V+  V  +L +                                  GP +VGLVG+SG+GKT  A+EIVR  EV + FSDGVVWL VN G   +DRLPSLM +LA +M EEVG     G  P       A+SDD                                                 GHGG    + L+CLV  DNV E EVV  L +TG+WVLL+TRD +++    G+ V +  + E +A+ VLR+ASELP +   P  A +LIELCGR  +DLAFVG
Sbjct:   97 MDLTPVEECLEAAGELVERCGGRGK-MTRVLNASSDKEEIARMKANIRDLEADLSLAGV-AILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAV--------------------------------GGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGA--KDRLPSLMLQLAHMMCEEVG-----GRRP-------ATSDD--------------------------------------GAAYIKEKMQRGHGG----KGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVG 415          
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 1.020e-44
Identity = 139/421 (33.02%), Postives = 194/421 (46.08%), Query Frame = 1
Query:  496 LDVGPLRECVEALGSLVGR--KDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSP--------------GGIGDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
            LDV PL +CV A+   V R  K  +   +L+  G    K +I  L  R+ D   ++ LAGI ++ K ++ D       SP              G   ++L + E  L + PK     A VP   P  +SWHV R  V  TV ++L                                  + GP +VGLVG+SG GKT  A+ IV    V E FSDG+VWLPVNEG    D LP LM +LA++++E++G          GS G   S  D                                                +GHGG    + L+CLV  DNV E++VV+ L +TG+W+LL+TRD ++++R  G+ V +  L E +A+ VLRRA+EL  +   P  A++LIELCGR  +DLAFVG
Sbjct:   89 LDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGD---KGDIVQLKERLRDLEGDLSLAGIASLAKYLIADP---KPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQAL--------------------------------DADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGV--HDNLPCLMLQLAQMVFEDIG----------GSVGRRPSGSD-------------------------------------DGLAYVKQQVENGHGG----KGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVG 418          
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.630e-44
Identity = 150/414 (36.23%), Postives = 192/414 (46.38%), Query Frame = 1
Query:  496 LDVGPLRECVEALGSLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAV------FKGVLE--DTGGGYGSSPGGIGDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRV-GGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
            L   PL ECV A+G+ V R  +RR  L R   ++  K+EIA L  R+ D   ++ LAGI  V       K +LE  DT      S       L   ++  AR        A VP+  P R+SWHV R  V+  V  +L   PG                             E GPR+VGLVG+SG+GKT  AAEIVR  EV E FSDG+VWL VN  DG  +RL +LM  LAR+++E++G     G  P G     A +                                                   GHGG    + L+CLV  DNV E  V++ L +TG+WVLL+TRD  ++R   GG  V +  L E DA  VLRRASEL  +   P  A EL+ELCGR  +D+AFVG
Sbjct:   75 LKATPLMECVNAVGAFVERC-SRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHS-----QTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDAL---PG-----------------------------EGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVN--DGATERLRALMMHLARVVFEDIGGS--VGRRPAGLDDGAAYTRQ---------------------------------------------RMQSGHGG----KGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVG 397          
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 1.920e-37
Identity = 115/323 (35.60%), Postives = 150/323 (46.44%), Query Frame = 1
Query:  742 DVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
            D L++ +  L + PK +P R          +SW+V+R  V+ TV   L S                                + GPR+VGLVG SG+GKT  A+E VR  EV E FSDG+ WL VN  DG ++RL SLM +LAR++YE++G     G  P        SSDD                                                 G GG +    L+CLV  DNV E EVV+ L +TG+WVLL+TR+  ++    G+ V +  L E DA  VLRRA+ELP     P  A +LIELCGR  +DLAFVG
Sbjct:   24 DQLSKTQAKLTKVPKGTPAR----------KSWYVKRRHVMDTVFEGLAS--------------------------------DGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVN--DGAKERLSSLMLQLARVVYEDIGCS--VGRRPT-------SSDD--------------------------------------CAAYIRQRMKKGTGGKK----LKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVG 251          
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 4.050e-37
Identity = 117/323 (36.22%), Postives = 150/323 (46.44%), Query Frame = 1
Query:  742 DVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
            ++L  QE+ + R PK    +A VP   P R+SWHV R  V  TV+ +L                                  EAGPR+VGLVG+SG GKT  AAE+VR   V E FSDG+VWL VN G   R  LPSLM +LAR++ E++G + G G P      A A                                                    +GHGG    + L+CL   DNV E EVV+ L  TG+ VLL+TR  +++    G PV +  L   DA+ VLR A+ELP     P  A +LI+LCGR  +DLAFVG
Sbjct:   79 ELLANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVERH-VTETVVEALTG--------------------------------EAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKR--LPSLMLQLARMVQEDIGGRVG-GHPNESGGNADA---------------------------------------------YIKQRMENGHGG----KGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVG 316          
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 2.390e-33
Identity = 130/409 (31.78%), Postives = 176/409 (43.03%), Query Frame = 1
Query:  496 LDVGPLRECVEALGSLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLED---TGGGYGSSPGGIGDV-LTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
            +DV P+ EC+EA G LV R   R + + R   +SS KD+IA +   + D    + LAG+ A+ +G   D   T            +V L   E+   R  K     A++P   P  +SWHV R  V+  V   L +                                + GP +VGLVG+SG+GKT  A+EIVR  E                     DRLPSLM +LA ++YEE+G     G  P       A+SDD                                                 GHGG      L+CL  VDNV E EVV  L + G+WVLL+TRD +++    G+ V +  L E +A+ VLR+A+ELP +   P  A +LIELCGR  +DLAF G
Sbjct:   71 MDVSPVEECLEAAGELVERCGGRGK-MTRVLNASSDKDQIARMKANIRDLEANLSLAGV-AILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTA--------------------------------DGGPPLVGLVGDSGSGKTTAASEIVRSNE---------------------DRLPSLMLQLAHMVYEEIG-----GRRP-------ATSDD--------------------------------------GTAYIKERMHRGHGG----EGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGG 370          
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 8.280e-27
Identity = 99/325 (30.46%), Postives = 135/325 (41.54%), Query Frame = 1
Query:  790 SPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIV------------------RGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
            S P A VP+  P   SWHV R+ V+  V   L                                     P+VVGLVG SG+GKT  AA IV                  R   V E+F DGVVWL V  G G  +R+P+LM +LA+ ++E+  +KH +G  P  S   G S+                                                   G G A  R+  RCLV  D+V E +++  L  TG+WVL T+RD D++ RV G  V + +L + +A+ +LR A+EL      P+ A ++IE C R    L FVG
Sbjct:  216 SVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQT--------------------------------PQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFED--LKHSYGFAPGASPTGGGSA--------------------------------------------FISDFVRGKGSAAGRK--RCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVG 460          
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: D7G5K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K4_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 1.690e-25
Identity = 84/237 (35.44%), Postives = 117/237 (49.37%), Query Frame = 1
Query:  496 LDVGPLRECVEALGSLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTG----GGYGSSPGGIGDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVG 1194
            LDV PL++CV  +      +  +RR       + S+KDE+A LN R+     ++GLAGI  V   V +  G               ++L  QE+ + R PK    +A +P   P R+SWHV R  V+ TV+ +L                                  EAGP +VGLVG+SG GKT  A+E+V    V E FSDG+VWL VN G   R  LPSLM +LAR+++E++G
Sbjct:   93 LDVTPLKDCV-VVAEKFAERCKKRRMRWEIVKAFSVKDELATLNARIDRLVGDLGLAGIATVLGEVADLKGMMLEQMVSDQAAAQKELLANQEIVIDRLPKPPTKKADIPQGTPMRKSWHVERRHVMDTVVEALTG--------------------------------EAGPHLVGLVGDSGAGKTTAASELVGSNVVRESFSDGIVWLAVNYGANKR--LPSLMLQLARMVHEDIG 294          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5L0N2_9PHAE2.870e-26890.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZW8_ECTSI1.770e-4736.30NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FZY7_ECTSI1.100e-4635.21NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KRK8_9PHAE1.020e-4433.02NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KLK9_9PHAE1.630e-4436.23NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KYW3_9PHAE1.920e-3735.60NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5J759_9PHAE4.050e-3736.22NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KJ30_9PHAE2.390e-3331.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFN6_ECTSI8.280e-2730.46NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G5K4_ECTSI1.690e-2535.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1107contigEcto-sp8_S_contig1107:3908..6186 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score201.4
Seed ortholog evalue1.1e-48
Seed eggNOG ortholog2880.D7FZW8
Model size1710
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-06_007420.1
Cds size1695
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143191.8621745-CDS-Ecto-sp8_S_contig1107:3907..49211681143191.8621745-CDS-Ecto-sp8_S_contig1107:3907..4921Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1107 3908..4921 -
1681143191.873051-CDS-Ecto-sp8_S_contig1107:5490..61711681143191.873051-CDS-Ecto-sp8_S_contig1107:5490..6171Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1107 5491..6171 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143191.8820293-UTR-Ecto-sp8_S_contig1107:6171..61861681143191.8820293-UTR-Ecto-sp8_S_contig1107:6171..6186Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig1107 6172..6186 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1107.1444.1prot_Ecto-sp8_S_contig1107.1444.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig1107 3908..6171 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig1107.1444.1

>prot_Ecto-sp8_S_contig1107.1444.1 ID=prot_Ecto-sp8_S_contig1107.1444.1|Name=mRNA_Ecto-sp8_S_contig1107.1444.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=565bp
MVPSLFDGAGHDHVDAAQRGGAGGADVRDLAADSQKLAMAMASKTPDAQY
TVQRLLTDHSPAVKGIHESLLAITSKIDLEVKTRREELLALAKMCTLVAA
ASVVVVSQEHEQERERHQQQRQREQRHGPSGKGTARNATRGPDNNGGGGG
GGGSERMMRLLDVGPLRECVEALGSLVGRKDARRRTLLRRSGSSSIKDEI
ADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGIGDVLTQQEV
DLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSR
GGSSSSSGDGYTAGGGGRAGGGGREAGPRVVGLVGESGTGKTATAAEIVR
GPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGA
PPVGSAGAGASSDDPWGGTRHGGGSGSGAADDGGGGGAAYVKALVEGGGQ
QQQQAAVAAAAADGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVL
LTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGAREL
IELCGRTGLDLAFVG
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mRNA from alignment at Ecto-sp8_S_contig1107:3908..6186-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig1107.1444.1 ID=mRNA_Ecto-sp8_S_contig1107.1444.1|Name=mRNA_Ecto-sp8_S_contig1107.1444.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2279bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1107:3908..6186- (Ectocarpus species8 EcLAC_412)
GTACGGTATCAGGGGATGGTTCCTTCGCTATTTGACGGTGCCGGCCACGA TCATGTCGACGCGGCTCAACGCGGCGGCGCCGGCGGCGCAGACGTGCGGG ATCTAGCCGCCGACTCGCAGAAGCTCGCCATGGCGATGGCCTCCAAGACC CCGGACGCGCAGTACACGGTGCAGCGGCTCCTGACGGACCACTCACCCGC CGTGAAGGGGATACACGAGTCGCTGCTCGCCATCACCTCAAAGATCGACC TCGAGGTGAAGACGAGGAGGGAAGAGCTGCTGGCCCTGGCGAAGATGTGC ACCCTCGTAGCGGCGGCGTCCGTCGTGGTCGTCTCCCAAGAGCACGAGCA GGAACGCGAACGGCACCAACAACAACGACAACGCGAGCAGCGGCACGGGC CGAGCGGGAAGGGGACAGCGAGGAACGCGACCCGCGGCCCCGACAACAAC GGCGGCGGCGGCGGCGGCGGTGGCAGCGAGAGGATGATGCGGTTGTTGGA CGTCGGGCCGTTGCGGGAGTGCGTCGAGGCGTTGGGGTCCTTGGTGGGGA GGAAGGATGCAAGACGACGAACCCTGCTGCGAAGGTCAGGCAGCAGCAGC ATCAAGGACGAGATCGCTGACCTCAACGGCCGCGTGCTTGACGCCGCGAG AGAGATGGGCCTTGCGGGGATCTTGGCCGTGTTCAAGGGCGTCTTGGTGA GTTTTTTTGTTTTCTATTGTTTTTCGTGAGGCAGCTCAAGGTGGGCAGCT GTTCTTGGGGAATGTAGCAAACGTGCAATCAAAGACAGACTACCGGTTCT TTTCTGCAGCGGGTACAATAGAGATGTAGGCGTTTGGTGTTTACGAAAGT ACAAGTATTTCGATAGAATATCGTAACACAAACCCCCATTTGAACGGATG ACAAGCAGCAGCTCATGGCAAGGGCCACCCTCTCGTACCCATGCACACGA GGGGAGAATCCGCCGGCCTAGCGTTGGTATCCGGTCGTCTCCATACGGTT GTGAAGCACATGGGACAGGTCGATTGCACGCGCAGTCTATGCGCACCAGA AGTGGGTCCCAGGTGCTTGGAGATCCTCCGCGCCTGCATGCAGACAAACT TGCCTCGTTGCTTCCTTACCATTCTGTGTTAGCAGTACTTTCTTACTGCA TGTCCCTCCTTGCGCGTACCCACGCGAAGACGTTTGCAACACGCCCCCCT CGCTCCGCTGCCTTTTTAACTGTCTTGCTCTACCTGTGGGTCAACGCACA TTTTTTTTTTGCCAGGAGGACACCGGCGGAGGGTACGGGAGCAGCCCGGG CGGCATCGGCGACGTCCTGACCCAGCAGGAGGTCGACCTGGCGCGGCAGC CGAAGAGATCTCCGCCAAGAGCTCGAGTCCCATCCTTGCTCCCCCGCCGT GAGAGCTGGCACGTGAGGCGCGAGCTGGTCATCGGCACGGTGCTCCGAAG CCTCCTCTCCGCTCCCGGGGGCAGCAATAGCCGCGGCGGCAGCAGCAGCA GCAGCGGGGACGGCTACACCGCGGGCGGCGGCGGGCGGGCAGGAGGCGGG GGGAGGGAGGCGGGGCCCCGGGTGGTGGGCCTTGTGGGAGAGAGCGGGAC CGGGAAGACCGCGACGGCGGCGGAGATCGTGCGTGGGCCCGAGGTGCTGG AGTACTTCTCCGACGGCGTGGTCTGGCTGCCCGTCAACGAGGGCGACGGC GACCGAGACCGTCTCCCGTCCCTGATGAAGAGGCTGGCGAGGATCATGTA CGAGGAAGTCGGCATCAAGCACGGTTTCGGCGCCCCTCCTGTGGGCAGCG CCGGCGCCGGCGCTAGCTCTGATGATCCCTGGGGAGGAACCCGTCATGGC GGCGGGAGCGGGAGCGGTGCTGCGGACGACGGCGGCGGCGGCGGAGCGGC CTACGTCAAGGCCCTCGTGGAAGGGGGCGGTCAGCAGCAGCAGCAGGCCG CCGTCGCCGCCGCCGCCGCCGACGGCCACGGCGGGGCGCGCCAGCGGCGG CCGCTACGGTGCCTGGTCGCGGTGGACAACGTGTGCGAGGCCGAGGTGGT CGCGACGCTCGCGGACACCGGCGTGTGGGTCCTGCTGACCACCCGCGACG GGGACGTGATCCGCAGGGTCGGGGGCAAGCCGGTGGTTATCGGCCGGCTC CTCGAGACGGACGCCGACTGGGTGCTGAGGAGGGCGTCGGAGCTGCCGGG CGACGAGCCCCCGCCCGCCGGGGCGAGGGAACTCATCGAGCTTTGCGGCC GGACGGGTCTGGACCTGGCGTTCGTAGGG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1107:3908..6186-

>mRNA_Ecto-sp8_S_contig1107.1444.1 ID=mRNA_Ecto-sp8_S_contig1107.1444.1|Name=mRNA_Ecto-sp8_S_contig1107.1444.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1695bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1107:3908..6186- (Ectocarpus species8 EcLAC_412)
ATGGTTCCTTCGCTATTTGACGGTGCCGGCCACGATCATGTCGACGCGGC
TCAACGCGGCGGCGCCGGCGGCGCAGACGTGCGGGATCTAGCCGCCGACT
CGCAGAAGCTCGCCATGGCGATGGCCTCCAAGACCCCGGACGCGCAGTAC
ACGGTGCAGCGGCTCCTGACGGACCACTCACCCGCCGTGAAGGGGATACA
CGAGTCGCTGCTCGCCATCACCTCAAAGATCGACCTCGAGGTGAAGACGA
GGAGGGAAGAGCTGCTGGCCCTGGCGAAGATGTGCACCCTCGTAGCGGCG
GCGTCCGTCGTGGTCGTCTCCCAAGAGCACGAGCAGGAACGCGAACGGCA
CCAACAACAACGACAACGCGAGCAGCGGCACGGGCCGAGCGGGAAGGGGA
CAGCGAGGAACGCGACCCGCGGCCCCGACAACAACGGCGGCGGCGGCGGC
GGCGGTGGCAGCGAGAGGATGATGCGGTTGTTGGACGTCGGGCCGTTGCG
GGAGTGCGTCGAGGCGTTGGGGTCCTTGGTGGGGAGGAAGGATGCAAGAC
GACGAACCCTGCTGCGAAGGTCAGGCAGCAGCAGCATCAAGGACGAGATC
GCTGACCTCAACGGCCGCGTGCTTGACGCCGCGAGAGAGATGGGCCTTGC
GGGGATCTTGGCCGTGTTCAAGGGCGTCTTGGAGGACACCGGCGGAGGGT
ACGGGAGCAGCCCGGGCGGCATCGGCGACGTCCTGACCCAGCAGGAGGTC
GACCTGGCGCGGCAGCCGAAGAGATCTCCGCCAAGAGCTCGAGTCCCATC
CTTGCTCCCCCGCCGTGAGAGCTGGCACGTGAGGCGCGAGCTGGTCATCG
GCACGGTGCTCCGAAGCCTCCTCTCCGCTCCCGGGGGCAGCAATAGCCGC
GGCGGCAGCAGCAGCAGCAGCGGGGACGGCTACACCGCGGGCGGCGGCGG
GCGGGCAGGAGGCGGGGGGAGGGAGGCGGGGCCCCGGGTGGTGGGCCTTG
TGGGAGAGAGCGGGACCGGGAAGACCGCGACGGCGGCGGAGATCGTGCGT
GGGCCCGAGGTGCTGGAGTACTTCTCCGACGGCGTGGTCTGGCTGCCCGT
CAACGAGGGCGACGGCGACCGAGACCGTCTCCCGTCCCTGATGAAGAGGC
TGGCGAGGATCATGTACGAGGAAGTCGGCATCAAGCACGGTTTCGGCGCC
CCTCCTGTGGGCAGCGCCGGCGCCGGCGCTAGCTCTGATGATCCCTGGGG
AGGAACCCGTCATGGCGGCGGGAGCGGGAGCGGTGCTGCGGACGACGGCG
GCGGCGGCGGAGCGGCCTACGTCAAGGCCCTCGTGGAAGGGGGCGGTCAG
CAGCAGCAGCAGGCCGCCGTCGCCGCCGCCGCCGCCGACGGCCACGGCGG
GGCGCGCCAGCGGCGGCCGCTACGGTGCCTGGTCGCGGTGGACAACGTGT
GCGAGGCCGAGGTGGTCGCGACGCTCGCGGACACCGGCGTGTGGGTCCTG
CTGACCACCCGCGACGGGGACGTGATCCGCAGGGTCGGGGGCAAGCCGGT
GGTTATCGGCCGGCTCCTCGAGACGGACGCCGACTGGGTGCTGAGGAGGG
CGTCGGAGCTGCCGGGCGACGAGCCCCCGCCCGCCGGGGCGAGGGAACTC
ATCGAGCTTTGCGGCCGGACGGGTCTGGACCTGGCGTTCGTAGGG
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