mRNA_Ecto-sp8_S_contig1107.1444.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: A0A6H5L0N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N2_9PHAE) HSP 1 Score: 781 bits (2017), Expect = 2.870e-268 Identity = 523/575 (90.96%), Postives = 530/575 (92.17%), Query Frame = 1
Query: 16 MVPSLFDGAGHDHVDAAQRGGAGGADVRDLAADSQKLAMAMASKTPDAQYTVQRLLTDHSPAVKGIHESLLAITSKIDLEVKTRREELLALAKMCTLVAAASVVXXXXXXXXXXXXXXXXXXXXQRHGPSGKGTARNATRGPDNXXXXXXXXXX----ERMMRLLDVGPLRECVEALGSLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGIGDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------DGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
MVPSL DGAGH+HVDAAQRGGAGGADVRDLAADSQKLA+AMASKTPDAQYTVQRL+ DHSPAVKGIHESLLAIT+KIDLEVKTRREELLA+AKMCTLVAAASVV XXXXXXXXXX QRHGPS KGTAR+AT G DNXXXXXXXXXX ERMMRLLDVGPLRECVEALG LVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGI DVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXX EAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DGHGG RQRRPLRCLVAVDNVCEAEVVATLA+TGVWVLLTTRD DVI RVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRT LDLAFVG
Sbjct: 1 MVPSLLDGAGHEHVDAAQRGGAGGADVRDLAADSQKLAIAMASKTPDAQYTVQRLVADHSPAVKGIHESLLAITAKIDLEVKTRREELLAVAKMCTLVAAASVVVVSQEHEQEXXXXXXXXXXEQRHGPSWKGTARSATCGSDNXXXXXXXXXXXXCSERMMRLLDVGPLRECVEALGFLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGISDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXX--EAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGPRQRRPLRCLVAVDNVCEAEVVATLAETGVWVLLTTRDWDVIPRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTVLDLAFVG 573
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 189 bits (479), Expect = 1.770e-47 Identity = 147/405 (36.30%), Postives = 196/405 (48.40%), Query Frame = 1
Query: 496 LDVGPLRECVEALGSLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGIGDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
+DV PL++CVEA + R +RR + R + S K EIA LN V ++GLAGI AV +G ++D + L + + L P+ A VP P R+SWHV R + TVL +L GS+ VV L G SG+GKT AAEIVR EV E FSDG+VWLPVNEG + RLPSLM +LAR+++EE+G GS G S+ + +GH G R L+CLV DNV E +VV+ L +TG+WVLL+TRD V++R GK VV+ L + DA+ VL+RA+ELP + P A +LI+LCGR +D+AFVG
Sbjct: 89 VDVAPLKDCVEAAKNFAERC-SRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGI-AVLEGKVDD-----------MKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDAL----NGSDRAC----------------------------VVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGA--KKRLPSLMLQLARMVHEEIG----------GSVGRVPSASE-------------------------------------DSATYIKQRLEEGHKGRR----LKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVG 395
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 186 bits (473), Expect = 1.100e-46 Identity = 144/409 (35.21%), Postives = 196/409 (47.92%), Query Frame = 1
Query: 496 LDVGPLRECVEALGSLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGG---GYGSSPGGIGD-VLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
+D+ P+ EC+EA G LV R R + + R +SS K+EIA + + D ++ LAG+ A+ +G D G++ + +L E + R K A++P P R+SWHV R V+ V +L + GP +VGLVG+SG+GKT A+EIVR EV + FSDGVVWL VN G +DRLPSLM +LA +M EEVG G P A+SDD GHGG + L+CLV DNV E EVV L +TG+WVLL+TRD +++ G+ V + + E +A+ VLR+ASELP + P A +LIELCGR +DLAFVG
Sbjct: 97 MDLTPVEECLEAAGELVERCGGRGK-MTRVLNASSDKEEIARMKANIRDLEADLSLAGV-AILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAV--------------------------------GGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGA--KDRLPSLMLQLAHMMCEEVG-----GRRP-------ATSDD--------------------------------------GAAYIKEKMQRGHGG----KGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVG 415
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 181 bits (458), Expect = 1.020e-44 Identity = 139/421 (33.02%), Postives = 194/421 (46.08%), Query Frame = 1
Query: 496 LDVGPLRECVEALGSLVGR--KDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSP--------------GGIGDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
LDV PL +CV A+ V R K + +L+ G K +I L R+ D ++ LAGI ++ K ++ D SP G ++L + E L + PK A VP P +SWHV R V TV ++L + GP +VGLVG+SG GKT A+ IV V E FSDG+VWLPVNEG D LP LM +LA++++E++G GS G S D +GHGG + L+CLV DNV E++VV+ L +TG+W+LL+TRD ++++R G+ V + L E +A+ VLRRA+EL + P A++LIELCGR +DLAFVG
Sbjct: 89 LDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGD---KGDIVQLKERLRDLEGDLSLAGIASLAKYLIADP---KPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQAL--------------------------------DADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGV--HDNLPCLMLQLAQMVFEDIG----------GSVGRRPSGSD-------------------------------------DGLAYVKQQVENGHGG----KGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVG 418
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 179 bits (455), Expect = 1.630e-44 Identity = 150/414 (36.23%), Postives = 192/414 (46.38%), Query Frame = 1
Query: 496 LDVGPLRECVEALGSLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAV------FKGVLE--DTGGGYGSSPGGIGDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRV-GGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
L PL ECV A+G+ V R +RR L R ++ K+EIA L R+ D ++ LAGI V K +LE DT S L ++ AR A VP+ P R+SWHV R V+ V +L PG E GPR+VGLVG+SG+GKT AAEIVR EV E FSDG+VWL VN DG +RL +LM LAR+++E++G G P G A + GHGG + L+CLV DNV E V++ L +TG+WVLL+TRD ++R GG V + L E DA VLRRASEL + P A EL+ELCGR +D+AFVG
Sbjct: 75 LKATPLMECVNAVGAFVERC-SRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHS-----QTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDAL---PG-----------------------------EGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVN--DGATERLRALMMHLARVVFEDIGGS--VGRRPAGLDDGAAYTRQ---------------------------------------------RMQSGHGG----KGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVG 397
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 159 bits (401), Expect = 1.920e-37 Identity = 115/323 (35.60%), Postives = 150/323 (46.44%), Query Frame = 1
Query: 742 DVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
D L++ + L + PK +P R +SW+V+R V+ TV L S + GPR+VGLVG SG+GKT A+E VR EV E FSDG+ WL VN DG ++RL SLM +LAR++YE++G G P SSDD G GG + L+CLV DNV E EVV+ L +TG+WVLL+TR+ ++ G+ V + L E DA VLRRA+ELP P A +LIELCGR +DLAFVG
Sbjct: 24 DQLSKTQAKLTKVPKGTPAR----------KSWYVKRRHVMDTVFEGLAS--------------------------------DGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVN--DGAKERLSSLMLQLARVVYEDIGCS--VGRRPT-------SSDD--------------------------------------CAAYIRQRMKKGTGGKK----LKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVG 251
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 155 bits (393), Expect = 4.050e-37 Identity = 117/323 (36.22%), Postives = 150/323 (46.44%), Query Frame = 1
Query: 742 DVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
++L QE+ + R PK +A VP P R+SWHV R V TV+ +L EAGPR+VGLVG+SG GKT AAE+VR V E FSDG+VWL VN G R LPSLM +LAR++ E++G + G G P A A +GHGG + L+CL DNV E EVV+ L TG+ VLL+TR +++ G PV + L DA+ VLR A+ELP P A +LI+LCGR +DLAFVG
Sbjct: 79 ELLANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVERH-VTETVVEALTG--------------------------------EAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKR--LPSLMLQLARMVQEDIGGRVG-GHPNESGGNADA---------------------------------------------YIKQRMENGHGG----KGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVG 316
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 146 bits (369), Expect = 2.390e-33 Identity = 130/409 (31.78%), Postives = 176/409 (43.03%), Query Frame = 1
Query: 496 LDVGPLRECVEALGSLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLED---TGGGYGSSPGGIGDV-LTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
+DV P+ EC+EA G LV R R + + R +SS KD+IA + + D + LAG+ A+ +G D T +V L E+ R K A++P P +SWHV R V+ V L + + GP +VGLVG+SG+GKT A+EIVR E DRLPSLM +LA ++YEE+G G P A+SDD GHGG L+CL VDNV E EVV L + G+WVLL+TRD +++ G+ V + L E +A+ VLR+A+ELP + P A +LIELCGR +DLAF G
Sbjct: 71 MDVSPVEECLEAAGELVERCGGRGK-MTRVLNASSDKDQIARMKANIRDLEANLSLAGV-AILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTA--------------------------------DGGPPLVGLVGDSGSGKTTAASEIVRSNE---------------------DRLPSLMLQLAHMVYEEIG-----GRRP-------ATSDD--------------------------------------GTAYIKERMHRGHGG----EGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGG 370
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 126 bits (317), Expect = 8.280e-27 Identity = 99/325 (30.46%), Postives = 135/325 (41.54%), Query Frame = 1
Query: 790 SPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIV------------------RGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGSAGAGASSDDPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGARQRRPLRCLVAVDNVCEAEVVATLADTGVWVLLTTRDGDVIRRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTGLDLAFVG 1710
S P A VP+ P SWHV R+ V+ V L P+VVGLVG SG+GKT AA IV R V E+F DGVVWL V G G +R+P+LM +LA+ ++E+ +KH +G P S G S+ G G A R+ RCLV D+V E +++ L TG+WVL T+RD D++ RV G V + +L + +A+ +LR A+EL P+ A ++IE C R L FVG
Sbjct: 216 SVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQT--------------------------------PQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFED--LKHSYGFAPGASPTGGGSA--------------------------------------------FISDFVRGKGSAAGRK--RCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVG 460
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Match: D7G5K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K4_ECTSI) HSP 1 Score: 117 bits (293), Expect = 1.690e-25 Identity = 84/237 (35.44%), Postives = 117/237 (49.37%), Query Frame = 1
Query: 496 LDVGPLRECVEALGSLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTG----GGYGSSPGGIGDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVG 1194
LDV PL++CV + + +RR + S+KDE+A LN R+ ++GLAGI V V + G ++L QE+ + R PK +A +P P R+SWHV R V+ TV+ +L EAGP +VGLVG+SG GKT A+E+V V E FSDG+VWL VN G R LPSLM +LAR+++E++G
Sbjct: 93 LDVTPLKDCV-VVAEKFAERCKKRRMRWEIVKAFSVKDELATLNARIDRLVGDLGLAGIATVLGEVADLKGMMLEQMVSDQAAAQKELLANQEIVIDRLPKPPTKKADIPQGTPMRKSWHVERRHVMDTVVEALTG--------------------------------EAGPHLVGLVGDSGAGKTTAASELVGSNVVRESFSDGIVWLAVNYGANKR--LPSLMLQLARMVHEDIG 294 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1107.1444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1107.1444.1 >prot_Ecto-sp8_S_contig1107.1444.1 ID=prot_Ecto-sp8_S_contig1107.1444.1|Name=mRNA_Ecto-sp8_S_contig1107.1444.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=565bp MVPSLFDGAGHDHVDAAQRGGAGGADVRDLAADSQKLAMAMASKTPDAQYback to top mRNA from alignment at Ecto-sp8_S_contig1107:3908..6186- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1107.1444.1 ID=mRNA_Ecto-sp8_S_contig1107.1444.1|Name=mRNA_Ecto-sp8_S_contig1107.1444.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2279bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1107:3908..6186- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1107:3908..6186- >mRNA_Ecto-sp8_S_contig1107.1444.1 ID=mRNA_Ecto-sp8_S_contig1107.1444.1|Name=mRNA_Ecto-sp8_S_contig1107.1444.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1695bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1107:3908..6186- (Ectocarpus species8 EcLAC_412)back to top |