mRNA_Ecto-sp8_S_contig11048.1422.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11048.1422.1 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI) HSP 1 Score: 812 bits (2098), Expect = 4.330e-274 Identity = 452/493 (91.68%), Postives = 461/493 (93.51%), Query Frame = 2
Query: 2 KEDASSPSEEVESAVKVNQDRKLTSVPKWQATEKWRNANDDAXXXXXXXXXXKTNKDXDSXXXXXXXXXXXXRNDSSNDDSSSDAACSSRCAYTSKDGTKGRXXXXXXXXXXXXXXXGCGAKQGVYGADCRVCYNNVDKALKQDSPDNRAIMCSTVMPVDVYGRRLSASDESDPLRVAKMIEAEDVGEELSVDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGMRVAIAAEAEGVAAYERSMGGLPGVTISSTQNPATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVYTSSQGSYHDAQLRSRSASVLGLNAPSFTHGTDLMLPVGANEALRESLGLRHGASLQHGGDGASLIALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLHSNLDFFSKGGKCANGLIDFIP 1480
KE+ASSPSEEVESAVKVNQ RKLTSVPKW+A EKWR ANDD XXXXXXXXXX X S XXXXXXXXXXX NDSS+D SSSDAACSSRC YTSKDGTKGR XXXXXXX GCGAKQG+YGADCRVCYNNVD+ALKQDSPDNRAIMCSTVMPVDVYGRRLSASDESDPLRVAKMIEAEDVGEELSVDVDREQAIRFFEEAAER YSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPG+RVAIAAEAEG+ AYERSMGGLPGVTISSTQNPATAALFADQYCG GTALILYVEPGSVLSRPFTSKDTHSPR DLLVVYT SQGSYHDAQLRSRSASVLG +APSFTHGTDLMLPVG NEALRESLGLRHGASLQH GDGASLIALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAP QLEPGSPNTAEVL SNLDFFSKGGKCANGLIDF+P
Sbjct: 1024 KEEASSPSEEVESAVKVNQYRKLTSVPKWKANEKWRTANDDGXXXXXXXXXXXXXXXXGSEXXXXXXXXXXXXNDSSDDSSSSDAACSSRCTYTSKDGTKGRVCXXXXXXXNVYGTKGCGAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTVMPVDVYGRRLSASDESDPLRVAKMIEAEDVGEELSVDVDREQAIRFFEEAAERSYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGIRVAIAAEAEGLDAYERSMGGLPGVTISSTQNPATAALFADQYCGPGTALILYVEPGSVLSRPFTSKDTHSPRSDLLVVYTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPVGTNEALRESLGLRHGASLQHDGDGASLIALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPVQLEPGSPNTAEVLQSNLDFFSKGGKCANGLIDFMP 1516
BLAST of mRNA_Ecto-sp8_S_contig11048.1422.1 vs. uniprot
Match: A0A6H5L4M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M7_9PHAE) HSP 1 Score: 763 bits (1970), Expect = 5.170e-264 Identity = 415/493 (84.18%), Postives = 439/493 (89.05%), Query Frame = 2
Query: 2 KEDASSPSEEVESAVKVNQDRKLTSVPKWQATEKWRNANDDAXXXXXXXXXXKTNKDXDSXXXXXXXXXXXXRNDSSNDDSSSDAACSSRCAYTSKDGTKGRXXXXXXXXXXXXXXXGCGAKQGVYGADCRVCYNNVDKALKQDSPDNRAIMCSTVMPVDVYGRRLSASDESDPLRVAKMIEAEDVGEELSVDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGMRVAIAAEAEGVAAYERSMGGLPGVTISSTQNPATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVYTSSQGSYHDAQLRSRSASVLGLNAPSFTHGTDLMLPVGANEALRESLGLRHGASLQHGGDGASLIALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLHSNLDFFSKGGKCANGLIDFIP 1480
KEDASSP+EEVE AVKV+QDRKLTSVP+W+A EKWR ANDD XXXXXXXXX K X XXXXXXXXXXX N SS+D SSSD CSSRC YTSKDGTKGR GCGAKQG+YGADCRVCYNNVD+ALKQDSPDNRAIMCST+MPVDVYGRRLSASDE DPLRVAKMIEAE+VG+E SVDVDR +AIRFFEEAAERP+ QDLKRHNLCAFVGGR GEEAMWEVTV SILQFMPGMRVAIAAE+EG+ AYERS+GGLPG ISSTQN ATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVV+T S GSYHD+QLRSRSASVLG +APSFTHGTDLMLP+G N+ALRESLG R GASLQH GDGASLIAL+ELVGFD+VSA+PQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRY CAIAPAQLEPGSPNTA VL SNLDFFSKGGKCANGLID +P
Sbjct: 335 KEDASSPAEEVELAVKVDQDRKLTSVPRWKAKEKWRTANDDGIXXXXXXXXXXXXKXXGGEXXXXXXXXXXXXNGSSDDSSSSDPGCSSRCTYTSKDGTKGRVCDSNCSTPNVYGTKGCGAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTMMPVDVYGRRLSASDEGDPLRVAKMIEAEEVGDEWSVDVDRVKAIRFFEEAAERPFFQDLKRHNLCAFVGGRVGEEAMWEVTVKSILQFMPGMRVAIAAESEGLDAYERSLGGLPGAAISSTQNSATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTGSPGSYHDSQLRSRSASVLGFDAPSFTHGTDLMLPMGTNQALRESLGFRLGASLQHDGDGASLIALEELVGFDRVSALPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYMCAIAPAQLEPGSPNTANVLQSNLDFFSKGGKCANGLIDIMP 827
BLAST of mRNA_Ecto-sp8_S_contig11048.1422.1 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI) HSP 1 Score: 661 bits (1706), Expect = 2.370e-216 Identity = 377/500 (75.40%), Postives = 410/500 (82.00%), Query Frame = 2
Query: 5 EDASSPSEEVESAVKVNQDRKLT-SVPKWQATEKWRNANDDAXXXXXXXXXXKTNKDXDSXXXXXXXXXXXXRNDSSNDDSSSDAACSSRCAYTSKDGTKGRXXXXXXXXXXXXXXXGCGAKQGVYGADCRVCYNNVDKALKQDSPDNRAIMCSTVMPVDVYGRRLSASDESDPLRVAKMI-------EAEDVGEELS-VDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGMRVAIAAEAEGVAAYERSMGGLPGVTISSTQNPATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVYTSSQGSYHDAQLRSRSASVLGLNAPSFTHGTDLMLPVGANEALRESLGLRHGASLQHGGDGASLIALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLHSNLDFFSKGGKCANGLIDFI 1477
EDASSPS E E R+L+ S PKW++ EKWR + DD+XXXXXXXXXX X XXXXXXXXXXXX ACSS C YTS+DGT+GR GC AKQG YG +CR C+N+VDKA KQD+P+NR+IMCSTVMPVDVYGRRL+ D S PLRVAK+ EA+DV EEL+ VDVDRE I FFEEAAERPYSQDLKR NLCAFVGGRAGEEAMW+VTV SILQF+PGMRVAIAAEAEG+ AYERSMGGLPGVT+S TQNPATAALFADQYCG GTALILYVEPGSVLSRPFTSKDTHSPRGDLLVV+T SQGSYHDAQLR RSASVLG +APSFTHGTDLMLPVGANE LRESLGLRHGASLQH GD AS++ALQELV FDQ SAVPQVLAALAYSR+TPGVWF+DPQAWVGQ+LF+EASIW++PLVKPRYTCAIAPAQLEPGSP TAEVL SNLDFFS GGKCANGLIDF+
Sbjct: 976 EDASSPSGEEEH-------RQLSGSTPKWKSQEKWRTSKDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------GACSSTCEYTSRDGTRGRVCDANCSTPDVYGTRGCNAKQGTYGEECRACFNDVDKARKQDTPENRSIMCSTVMPVDVYGRRLTPDDGSRPLRVAKIFSVEDSEEEADDVEEELANVDVDREDVISFFEEAAERPYSQDLKRRNLCAFVGGRAGEEAMWDVTVKSILQFVPGMRVAIAAEAEGLDAYERSMGGLPGVTVSGTQNPATAALFADQYCGPGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTGSQGSYHDAQLRRRSASVLGFDAPSFTHGTDLMLPVGANEDLRESLGLRHGASLQHDGDWASMVALQELVEFDQFSAVPQVLAALAYSRDTPGVWFLDPQAWVGQHLFQEASIWNIPLVKPRYTCAIAPAQLEPGSPKTAEVLQSNLDFFSMGGKCANGLIDFV 1459
BLAST of mRNA_Ecto-sp8_S_contig11048.1422.1 vs. uniprot
Match: A0A6H5L131_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L131_9PHAE) HSP 1 Score: 507 bits (1305), Expect = 1.920e-165 Identity = 270/417 (64.75%), Postives = 311/417 (74.58%), Query Frame = 2
Query: 260 CSSRCAYTSKDGTKGRXXXXXXXXXXXXXXXGCGAKQGVYGADCRVCYNNVDKALKQDSPDNRAIMCSTVMPVDVYGRRLSASDESDPLRVAKMIEAEDVGEELS-------VDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGMRVAIAAEAEGVAAYERSMGGLPGVTISSTQNPATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVYTSSQGSYHDAQLRSRSASVLGLNAPSFTHGTDLMLPVGANEALRESLGLRHGA-SLQHGGDGASLIALQELVGFDQVSAVPQ----VLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLHSNLDFFSKGGKCANGLIDF 1474
C+ C YTS DGT+GR GCG K G YG +CR CYN+ D+A KQD+P NRAIMCSTVMPVDV LS +E L++ + +E ED EE+ VD RE I FFEEAAERP+ QDLKR NLCAFVGGR EEAMWEVTV SILQFMPGMRVAIAA A+G+ AYERSMGG PGVTISSTQNPATA+LFAD++CGAGTALILYVEPGSVLSRPFT KDTHSPRGDLLVV+ QGSY + + RS VLGL APSFT GTDLMLPVGAN+ LRESLG+ A S++ GDGA++ AL E V F++VS+VPQ +LAALAY+R TPGVWF DPQ W GQ LF+EASIWD+PL KPR+TCAIA LEP S + A L +NLDFFS+GGKC +GLI++
Sbjct: 307 CTDGCKYTSNDGTRGRVCDANCSRRDVHGTLGCGTKDGAYGTECRACYNDGDEAHKQDTPGNRAIMCSTVMPVDVRSLWLSIDNEDYSLQIGQAMEGEDGEEEVEGSFERVGVDGVREGVISFFEEAAERPFFQDLKRGNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSMGGRPGVTISSTQNPATASLFADRFCGAGTALILYVEPGSVLSRPFTFKDTHSPRGDLLVVHGGGQGSYRNDERSRRSGLVLGLEAPSFTRGTDLMLPVGANKDLRESLGMEMQADSVRRDGDGAAVTALAEPVDFEEVSSVPQARNRMLAALAYARNTPGVWFGDPQVWSGQRLFQEASIWDIPLAKPRFTCAIA-LTLEPDSLHAATTLQNNLDFFSRGGKCEDGLIEY 722
BLAST of mRNA_Ecto-sp8_S_contig11048.1422.1 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE) HSP 1 Score: 519 bits (1336), Expect = 2.450e-165 Identity = 275/417 (65.95%), Postives = 316/417 (75.78%), Query Frame = 2
Query: 260 CSSRCAYTSKDGTKGRXXXXXXXXXXXXXXXGCGAKQGVYGADCRVCYNNVDKALKQDSPDNRAIMCSTVMPVDVYGRRLSASDESDPLRVAKMIEAEDVGEELS---------VDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGMRVAIAAEAEGVAAYERSMGGLPGVTISSTQNPATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVYTSSQGSYHDAQLRSRSASVLGLNAPSFTHGTDLMLPVGANEALRESLGLRHGAS-LQHGGDGASLIALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLHSNLDFFSKGGKCANGLIDFIP 1480
C C YTSKDGT+GR GCGAK G YGADCR CYN+V+KA QD+P NRAIMCST PVDVYGRRLSA E ++A+ +EAED +E S V+V RE+AIRFFE AAERPY ++ R +LCAFV G GEEAMWEVTV SILQFMPGM+VAIAAE+EG+ AYERSMG LPGVT+S TQNPATAALFAD+YC + LILYV PGSVLSR FT KDTHSPRGDLLVV+ SQGSYHD +L RS+SVLG PSFT GTDLMLP AN +RE+LGL+ G+ LQ DG ++IALQE V FDQVSAVPQVLAA+AYSR+TPGVWFVDP+ WVGQNLFKEASIWD+PLVKPR+TC IA +L+ SP TA+VL +++ FF+ GGKCANGLI P
Sbjct: 702 CLDGCDYTSKDGTRGRVCDSNCSRSDAYGTLGCGAKSGKYGADCRACYNDVEKARTQDTPANRAIMCSTREPVDVYGRRLSAHPEDRFPQLAQQMEAEDSEDENSEGSYEPRVEVEVGREKAIRFFEAAAERPYLGEINRGDLCAFVSGGVGEEAMWEVTVKSILQFMPGMKVAIAAESEGLDAYERSMGRLPGVTVSGTQNPATAALFADKYCSF-SELILYVRPGSVLSRSFTPKDTHSPRGDLLVVHAGSQGSYHDTELSHRSSSVLGFETPSFTQGTDLMLPGDANYYVREALGLKIGSEGLQEDRDGDAVIALQEFVYFDQVSAVPQVLAAVAYSRKTPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRFTCTIASDKLDSSSPKTAQVLQNSVVFFANGGKCANGLIADAP 1117
BLAST of mRNA_Ecto-sp8_S_contig11048.1422.1 vs. uniprot
Match: D7FI38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI38_ECTSI) HSP 1 Score: 502 bits (1292), Expect = 2.590e-164 Identity = 270/418 (64.59%), Postives = 309/418 (73.92%), Query Frame = 2
Query: 260 CSSRCAYTSKDGTKGRXXXXXXXXXXXXXXXGCGAKQGVYGADCRVCYNNVDKALKQDSPDNRAIMCSTVMPVDVYGRRLSASDESDPLRVAKMIEAEDVGEELS-----VDVD--REQAIRFFEEAAERPYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGMRVAIAAEAEGVAAYERSMGGLPGVTISSTQNPATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVYTSSQGSYHDAQLRSRSASVLGLNAPSFTHGTDLMLPVGANEALRESLGLR-HGASLQHGGDGASLIALQELVGFDQVSAVPQ----VLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLHSNLDFFSKGGKCANGLIDFI 1477
C C YTSKDGT+GR GCG K G YG +CR CYN+ KA KQD+P+NR IMCST MPVDV LS E L++A +EAED EE VDVD RE I FFEE AERP+ QDLKR NLCAFV GR EEAMWEVTV SILQFMPGMRVAIAA A+G+ AYERSMGGLPGVTISST NPATA+LFAD++CGAGTALILYVE GSVLSRPFTSKDTHSPRGDLLVV+ QGSY D + RS VLGL APSFT GTDL+LPVGAN+ LR SLG+ H S++ G GA+++AL E F++VSAVPQ +LAALAY+R TPGVWF DP+ WVGQ+LF+EASIWD+PLVKPR+TCAIA A LEP A L +NLDFFS+GGKC +GLI+++
Sbjct: 249 CLDGCEYTSKDGTRGRVCDANCSRRDVYGTLGCGTKDGAYGTECRACYNDGGKAHKQDTPENRVIMCSTAMPVDVRDLWLSTDSEDHSLQIAHAMEAEDREEEAEGSFERVDVDGIREGVISFFEEEAERPFFQDLKRGNLCAFVSGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSMGGLPGVTISSTHNPATASLFADRFCGAGTALILYVELGSVLSRPFTSKDTHSPRGDLLVVHRGGQGSYRDDERSRRSGLVLGLEAPSFTRGTDLVLPVGANKDLRGSLGMEMHADSVRRDGVGAAVMALTEPADFEEVSAVPQARNRMLAALAYARNTPGVWFGDPKVWVGQHLFQEASIWDIPLVKPRFTCAIALA-LEPDILRAATTLQNNLDFFSRGGKCEDGLIEYL 665
BLAST of mRNA_Ecto-sp8_S_contig11048.1422.1 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI) HSP 1 Score: 530 bits (1365), Expect = 8.810e-164 Identity = 302/496 (60.89%), Postives = 354/496 (71.37%), Query Frame = 2
Query: 29 EVESAVKVNQDRKLTS-VPKWQATEKWRNANDDAXXXXXXXXXXKTNKDXDSXXXXXXXXXXXXRNDSSNDDSSSDAACSSRCAYTSKDGTKGRXXXXXXXXXXXXXXXGCGAKQGVYGADCRVCYNNVDKALKQDSPDNRAIMCSTVMPVDVYGRRLSASDESDPLRVAKMIEAEDVGEELS-------VDVD---REQAIRFFEEAAERPYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGMRVAIAAEAEGVAAYERSMGGLPGVTISSTQNPATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVYTSSQGSYHDAQLRSRSASVLGLNAPSFTHGTDLMLPVGANEALRESLGLRHGAS-LQHGGDGASLIALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLHSNLDFFSKGGKCANGLIDFIP 1480
++E+ K + R+L+ VPKW+A EKW+N XXXXXXXX +DSS + C C YTSKDGT+GR GCGAK G YGADCR CYN+ +KA KQD+P NRAIMCST PVDVYGRRLS + L +A++ EAE+ +E S VDV+ RE+A+RFFE AAER Y +++R NLCAFV G AGEEAMWEVTV SILQFMPGM+VA+AAEAEG+ AYERSMG LPGVT+S TQNPATA L+AD+YC + LILYV+PGSVLSR FTSKDTHSPRGDLLVV+ SQGSYHD +L RSASVLG APSFT GTDLMLP AN LRE+LGL+ G+ LQ GDG ++IALQ+ V FDQVSAVPQVLAA+AYSRETPGVWF+DP+ WVGQNLFKEASIWD+PLVKPR+TC IA +L+ SP TAE L S++DFF+ GGKCANGLI P
Sbjct: 1339 DLEALQKDEEHRQLSEDVPKWRAQEKWKNNTXXXXXXXXXXXKQY-------------------------EDSSDEEGCMDGCEYTSKDGTRGRVCDSNCSSPNVYGTLGCGAKNGKYGADCRACYNDDEKARKQDTPGNRAIMCSTREPVDVYGRRLSGHQDFS-LELARLTEAENSEDEDSEDGFEPRVDVEVGGREKAVRFFEAAAERTYLGEVERGNLCAFVSGWAGEEAMWEVTVKSILQFMPGMKVAVAAEAEGLDAYERSMGRLPGVTVSGTQNPATATLYADKYCSF-SELILYVKPGSVLSRSFTSKDTHSPRGDLLVVHAGSQGSYHDTELSRRSASVLGFEAPSFTQGTDLMLPGDANYYLREALGLKIGSDGLQGDGDGDAVIALQKFVDFDQVSAVPQVLAAVAYSRETPGVWFIDPRGWVGQNLFKEASIWDIPLVKPRFTCTIAADKLDSASPKTAETLQSSVDFFANGGKCANGLIAAAP 1807
BLAST of mRNA_Ecto-sp8_S_contig11048.1422.1 vs. uniprot
Match: A0A6H5JHL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHL7_9PHAE) HSP 1 Score: 430 bits (1105), Expect = 8.610e-135 Identity = 223/292 (76.37%), Postives = 241/292 (82.53%), Query Frame = 2
Query: 353 GCGAKQGVYGADCRVCYNNVDKALKQDSPDNRAIMCSTVMPVDVYGRRLSASDESDPLRVAKMIEAEDVGEEL--------SVDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGMRVAIAAEAEGVAAYERSMGGLPGVTISSTQNPATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVYTSSQGSYHDAQLRSRSASVLGLNAPSFTHGTDLMLPVGANEALRESLGLRHGASLQHGGDGASLIALQELVGFD 1204
GC AKQG YG + R C+N+VDKA KQD+P+NRAIMCSTVMPVDVYGRRL+ D S PLR AK+ ED EE +VDVDRE I FFEEAA+RPYSQDLKR NLCAFV GR GEE MWEVTV ILQFMPGMRVAIAAEAEG+ YERSMGG PGVT+S TQN ATA+LFADQYCGAG ALILYV+PGS LSR FTSKDTHSPRGDLLVV+T QGSYHDAQLR RS SVLG +APSFT GTDLMLPVGANE LRESLGLRHGASLQH GDGAS++ALQE+V FD
Sbjct: 510 GCNAKQGTYGEERRACFNDVDKARKQDTPENRAIMCSTVMPVDVYGRRLTPDDGSRPLREAKIFSVEDSEEEADGVEGELANVDVDREDVISFFEEAAKRPYSQDLKRRNLCAFVSGRVGEETMWEVTVKIILQFMPGMRVAIAAEAEGLDTYERSMGGRPGVTVSGTQNLATASLFADQYCGAGAALILYVKPGSDLSRFFTSKDTHSPRGDLLVVHTGFQGSYHDAQLRRRSVSVLGFDAPSFTDGTDLMLPVGANEDLRESLGLRHGASLQHDGDGASMVALQEMVEFD 801
BLAST of mRNA_Ecto-sp8_S_contig11048.1422.1 vs. uniprot
Match: A0A6H5JGJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ2_9PHAE) HSP 1 Score: 342 bits (876), Expect = 2.800e-101 Identity = 228/505 (45.15%), Postives = 280/505 (55.45%), Query Frame = 2
Query: 218 RNDSSNDDSSSDAACSSRCAYTSKDGTKGRXXXXXXXXXXXXXXXGCGAKQGVYGADCRVCYNNVDKALKQDSPDNRAIMCSTVMPVDVYGRRLSASDESDPLRVAKMI---------------------------------------------EAEDVGEELSVDVDREQAIRF------------FEEAAERPYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGMRVAIAAEAEGVAAYERSMGGLPGVTISSTQNPATAALFADQYCGA--GTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVYTSSQ-GSYHDAQLRSRSASVLGLNA------------PSFTHGTDLMLPVGANEALRESLGLRHGASLQHGGDGASLI-ALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPAQLEP-----------GSPNTAEVLHSNLDFFSKGGKCANGLIDFIP 1480
R SS D+ SD C+ C YTS DGT G XXXXXXXXXXX GC G YG +CR C+N+VD AL+ D+ DNR+IMC T++PVDV RRL EA + S A F F +AA+ P+++D+ +LCAF+ GRAGE W VTV+SI +F PGMRVA+AAE E V YER++G LPGVT++ST + TA+L+AD+YCG T+LI+YV GS SRP TSKDTHSPRGDLLV ++SS S+H A L ++ASVL L+ PSFT GTDLMLP GAN LR+ + GD A+ A+Q L D ++AVPQ LAAL YSR+ GVWF+DPQAWV + LFKE SIWD+PLVKPR+TCA+ PA L S A+VL LDFFSKGG C+NG IDF P
Sbjct: 307 RTTSSAGDAPSD--CNDSCEYTSNDGTTGXXXXXXXXXXXXYGFFGCDTNDGQYGGNCRYCFNDVDSALEFDAQDNRSIMCDTLLPVDVNSRRLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEAMAITPRASAGALPSSARHFAPTGATDKQALAFAQAAKSPFTEDVAYGSLCAFIAGRAGEVDEWAVTVSSIQKFAPGMRVAVAAEEEAVHLYERAVGPLPGVTVASTPSALTASLYADRYCGGTNSTSLIMYVTRGSTFSRPLTSKDTHSPRGDLLVAHSSSATASHHVAHLAKQTASVLALSEGGAAPPPPLPLPPSFTFGTDLMLPAGANADLRDLFASK--------GDKATFQQAVQTLADLDDLAAVPQALAALQYSRQPEGVWFLDPQAWVSEYLFKEVSIWDIPLVKPRFTCAVDPALLRNHASAGAARGGRSSFEVAQVLQDGLDFFSKGGTCSNGQIDFRP 801
BLAST of mRNA_Ecto-sp8_S_contig11048.1422.1 vs. uniprot
Match: D7FR80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR80_ECTSI) HSP 1 Score: 345 bits (884), Expect = 1.440e-100 Identity = 219/504 (43.45%), Postives = 273/504 (54.17%), Query Frame = 2
Query: 260 CSSRCAYTSKDGTKGRXXXXXXXXXXXXXXXGCGAKQGVYGADCRVCYNNVDKALKQDSPDNRAIMCSTVMPVDVYGRRL------------------------------------------------------------------------SASDESDPLRVAKMIEAEDVGEELSVDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGMRVAIAAEAEGVAAYERSMGGLPGVTISSTQNPATAALFADQYCGA--GTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVYTSS-QGSYHDAQLRSRSASVLGLNA-----------PSFTHGTDLMLPVGANEALRESLGLRHGASLQHGGDGASLIALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPAQLEP-----------GSPNTAEVLHSNLDFFSKGGKCANGLIDFIP 1480
C C YTS DGT GRXXXXXXX GC + G YG +CR C+N+VD ALK D+ DNRAIMC T++PVDV RRL S + R + +QA+ F + AA+ P+++D+ +LCAF+ GRAGE W VTV+SI +F PGMRVA+AAE + V YE ++G LPGVT++ST + TA+L+AD+YCG T+LI+YV GS SRP TSKDTHSPRGDLLV ++SS + S+H AQL ++ASVL L+ PSFT GTDLMLPVGAN LR+ + G A A+Q L G D ++AVPQ LAAL YSR+ GVWF+DPQAW+ + LFKE SIWD+PLVKPR+TCA+ PA L S A+VL LDFFSKGG C+NG IDF P
Sbjct: 517 CDDSCEYTSNDGTTGRXXXXXXXDGNPYGFLGCDTEDGQYGGNCRYCFNDVDSALKFDAQDNRAIMCDTLLPVDVNSRRLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEAMASAPRASTGALPSSARHSAPSGATDKQALAFAQ-AAKSPFTEDVAYGSLCAFIAGRAGEVDEWAVTVSSIQKFAPGMRVAVAAEEDAVHLYEWAVGSLPGVTVASTPSALTASLYADRYCGGTKATSLIMYVTRGSTFSRPLTSKDTHSPRGDLLVAHSSSARASHHVAQLAKQTASVLALSEGSAAPPTVPLPPSFTFGTDLMLPVGANADLRDLFASK-------GDKAAFQQAVQTLAGLDDLAAVPQALAALQYSRQPEGVWFLDPQAWISEYLFKEVSIWDIPLVKPRFTCAVDPALLRNHDSAGPTRGGRSSFEVAQVLQDGLDFFSKGGTCSNGQIDFRP 1012 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11048.1422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11048.1422.1 >prot_Ecto-sp8_S_contig11048.1422.1 ID=prot_Ecto-sp8_S_contig11048.1422.1|Name=mRNA_Ecto-sp8_S_contig11048.1422.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=343bp MCSTVMPVDVYGRRLSASDESDPLRVAKMIEAEDVGEELSVDVDREQAIRback to top mRNA from alignment at Ecto-sp8_S_contig11048:2733..6612- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11048.1422.1 ID=mRNA_Ecto-sp8_S_contig11048.1422.1|Name=mRNA_Ecto-sp8_S_contig11048.1422.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3880bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11048:2733..6612- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11048:2733..6612- >mRNA_Ecto-sp8_S_contig11048.1422.1 ID=mRNA_Ecto-sp8_S_contig11048.1422.1|Name=mRNA_Ecto-sp8_S_contig11048.1422.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1029bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11048:2733..6612- (Ectocarpus species8 EcLAC_412)back to top |