mRNA_Ecto-sp8_S_contig11033.1409.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11033.1409.1 vs. uniprot
Match: D8LGV5_ECTSI (Methyltrans_SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGV5_ECTSI) HSP 1 Score: 154 bits (389), Expect = 5.260e-45 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 1
Query: 1 QTLFKPSLLATKEGGVVVATNHVSTVDCAEWVENLSKCAAKAGRTVDSVQVLLPEDDFPSPDGRHPLKVAIVHV 222
QTLFKPSLLATKEGGV+VATNHVSTVDCAEWVENLSKCAAKAGRTVDSVQVLLPEDDFPSPDGRHPLKVAIVHV
Sbjct: 184 QTLFKPSLLATKEGGVIVATNHVSTVDCAEWVENLSKCAAKAGRTVDSVQVLLPEDDFPSPDGRHPLKVAIVHV 257
BLAST of mRNA_Ecto-sp8_S_contig11033.1409.1 vs. uniprot
Match: A0A7S3WTR1_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WTR1_EMIHU) HSP 1 Score: 101 bits (251), Expect = 1.810e-25 Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 1 QTLFKPSLLATKEGGVVVATNHVSTVDCAEWVENLSKCAAKAGRTVDSVQVLLPEDDFPSPDGRHPLKVAIVHV 222
Q+LFKP +LAT+ GG V+A NHV++V+ EWV++L +CA KAGR ++ V VL PE D+PSPDG+HPLK+A+ V
Sbjct: 69 QSLFKPCVLATRPGGTVLAVNHVASVELDEWVDSLERCAKKAGRPLEDVTVLPPEQDYPSPDGKHPLKMALARV 142
BLAST of mRNA_Ecto-sp8_S_contig11033.1409.1 vs. uniprot
Match: A0A7S4BNE7_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BNE7_CHRCT) HSP 1 Score: 105 bits (262), Expect = 7.190e-25 Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 1
Query: 1 QTLFKPSLLATKEGGVVVATNHVSTVDCAEWVENLSKCAAKAGRTVDSVQVLLPEDDFPSPDGRHPLKVAIV 216
Q+LFKP +LATK GG V+A NHV+TVD W++ L +CA KAGR + SV VL PE+DFPSPDGRHPLK+AI
Sbjct: 351 QSLFKPCVLATKRGGTVIAVNHVATVDLDSWLDVLQRCATKAGRPLRSVSVLPPEEDFPSPDGRHPLKIAIA 422
BLAST of mRNA_Ecto-sp8_S_contig11033.1409.1 vs. uniprot
Match: A0A7S2MC54_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MC54_9EUKA) HSP 1 Score: 97.4 bits (241), Expect = 4.050e-24 Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 1
Query: 1 QTLFKPSLLATKEGGVVVATNHVSTVDCAEWVENLSKCAAKAGRTVDSVQVLLPEDDFPSPDGRHPLKVAIVHV 222
++LFKP +LAT+ GG V+A NHV++VD EW+E L++CA KA + + +++L PE DFPSPDG+HPLK+A+ V
Sbjct: 55 ESLFKPCVLATRPGGTVLAVNHVASVDVDEWIEKLNRCAKKADQPLADLKILSPEADFPSPDGKHPLKIALARV 128
BLAST of mRNA_Ecto-sp8_S_contig11033.1409.1 vs. uniprot
Match: R1DME3_EMIHU (Methyltrans_SAM domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DME3_EMIHU) HSP 1 Score: 101 bits (251), Expect = 1.570e-23 Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 1 QTLFKPSLLATKEGGVVVATNHVSTVDCAEWVENLSKCAAKAGRTVDSVQVLLPEDDFPSPDGRHPLKVAIVHV 222
Q+LFKP +LAT+ GG V+A NHV++V+ EWV++L +CA KAGR ++ V VL PE D+PSPDG+HPLK+A+ V
Sbjct: 291 QSLFKPCVLATRPGGTVLAVNHVASVELDEWVDSLERCAKKAGRPLEDVTVLPPEQDYPSPDGKHPLKMALARV 364
BLAST of mRNA_Ecto-sp8_S_contig11033.1409.1 vs. uniprot
Match: A0A2E3BEH7_9GAMM (SAM-dependent methyltransferase n=1 Tax=Oleispira sp. TaxID=2024846 RepID=A0A2E3BEH7_9GAMM) HSP 1 Score: 100 bits (249), Expect = 1.880e-23 Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 1 QTLFKPSLLATKEGGVVVATNHVSTVDCAEWVENLSKCAAKAGRTVDSVQVLLPEDDFPSPDGRHPLKVAIVHV 222
Q+LFKPSLLATK+GG ++ N+V+ VD EW+E+L +CA KAGR + S+++LLP+ DFPSPDG PLK+AI +
Sbjct: 260 QSLFKPSLLATKDGGQLICCNNVAQVDLDEWLESLKRCAIKAGRPLKSIEILLPDSDFPSPDGNPPLKIAICQL 333
BLAST of mRNA_Ecto-sp8_S_contig11033.1409.1 vs. uniprot
Match: A0A2V1GTL4_9GAMM (SAM-dependent methyltransferase n=1 Tax=Pelagibaculum spongiae TaxID=2080658 RepID=A0A2V1GTL4_9GAMM) HSP 1 Score: 99.8 bits (247), Expect = 3.720e-23 Identity = 45/74 (60.81%), Postives = 58/74 (78.38%), Query Frame = 1
Query: 1 QTLFKPSLLATKEGGVVVATNHVSTVDCAEWVENLSKCAAKAGRTVDSVQVLLPEDDFPSPDGRHPLKVAIVHV 222
Q+LFKPSLLATKEGG ++ N+V+ VD EW+E L +CA KAGR + S++VLLP+ DFPSPDG PLK+AI +
Sbjct: 261 QSLFKPSLLATKEGGQLICCNNVAQVDRDEWLELLQRCAIKAGRPLKSIEVLLPDSDFPSPDGNPPLKIAICQL 334
BLAST of mRNA_Ecto-sp8_S_contig11033.1409.1 vs. uniprot
Match: A0A7S3BKP9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BKP9_9EUKA) HSP 1 Score: 94.4 bits (233), Expect = 6.790e-23 Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 1 QTLFKPSLLATKEGGVVVATNHVSTVDCAEWVENLSKCAAKAGRTVDSVQVLLPEDDFPS-PDGRHPLKVAIVHV 222
Q+LFKP+ LAT+ GG V+ATNHVSTVD AEW ++L++CAAKAGR + +Q L PE DFP DGR PLK+A+ V
Sbjct: 57 QSLFKPACLATRPGGTVLATNHVSTVDEAEWHDSLARCAAKAGRPLVDIQTLSPEHDFPMLVDGRSPLKLALAIV 131
BLAST of mRNA_Ecto-sp8_S_contig11033.1409.1 vs. uniprot
Match: R4YLY4_OLEAN (Rhodopsin-like GPCR superfamily protein n=1 Tax=Oleispira antarctica RB-8 TaxID=698738 RepID=R4YLY4_OLEAN) HSP 1 Score: 99.0 bits (245), Expect = 7.260e-23 Identity = 45/74 (60.81%), Postives = 58/74 (78.38%), Query Frame = 1
Query: 1 QTLFKPSLLATKEGGVVVATNHVSTVDCAEWVENLSKCAAKAGRTVDSVQVLLPEDDFPSPDGRHPLKVAIVHV 222
Q+LFKPSLLATK GG ++ N+V+ VD EW+E+L +CA KAGR + S+++LLPE DFPSPDG PLKVAI +
Sbjct: 261 QSLFKPSLLATKSGGQLICCNNVAQVDRDEWLESLKRCAIKAGRPLKSIEMLLPEADFPSPDGNPPLKVAICQL 334
BLAST of mRNA_Ecto-sp8_S_contig11033.1409.1 vs. uniprot
Match: A0A1X1QMF3_9GAMM (SAM-dependent methyltransferase n=1 Tax=Cycloclasticus sp. symbiont of Poecilosclerida sp. N TaxID=1840472 RepID=A0A1X1QMF3_9GAMM) HSP 1 Score: 96.7 bits (239), Expect = 5.380e-22 Identity = 43/74 (58.11%), Postives = 58/74 (78.38%), Query Frame = 1
Query: 1 QTLFKPSLLATKEGGVVVATNHVSTVDCAEWVENLSKCAAKAGRTVDSVQVLLPEDDFPSPDGRHPLKVAIVHV 222
Q+LFKPSLLATK+GG ++ N+V+ VD W+E+L +CA KAGR + S++VLLP+ DFPSPDG PLK+AI +
Sbjct: 261 QSLFKPSLLATKDGGQLICCNNVAQVDRDGWLESLKRCAIKAGRPLKSIKVLLPDTDFPSPDGNPPLKIAICQL 334 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11033.1409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11033.1409.1 >prot_Ecto-sp8_S_contig11033.1409.1 ID=prot_Ecto-sp8_S_contig11033.1409.1|Name=mRNA_Ecto-sp8_S_contig11033.1409.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=75bp QTLFKPSLLATKEGGVVVATNHVSTVDCAEWVENLSKCAAKAGRTVDSVQback to top mRNA from alignment at Ecto-sp8_S_contig11033:5485..6610- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11033.1409.1 ID=mRNA_Ecto-sp8_S_contig11033.1409.1|Name=mRNA_Ecto-sp8_S_contig11033.1409.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1126bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11033:5485..6610- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11033:5485..6610- >mRNA_Ecto-sp8_S_contig11033.1409.1 ID=mRNA_Ecto-sp8_S_contig11033.1409.1|Name=mRNA_Ecto-sp8_S_contig11033.1409.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=225bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11033:5485..6610- (Ectocarpus species8 EcLAC_412)back to top |