mRNA_Ecto-sp8_S_contig1102.1394.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1102.1394.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE) HSP 1 Score: 538 bits (1387), Expect = 3.770e-183 Identity = 251/310 (80.97%), Postives = 282/310 (90.97%), Query Frame = 2
Query: 536 VCPNGDVDCGDPHMAGLLGQRINWSGVDGGWYSLIKDDNADLNVNVRVTAPLPDEFPDRQLMTSLAVVSEGHSLVIQVANPYTIDTDGCPERVSPCLANGGLSIIVDGQEVDELLRFSREMPVADGAMTVSASNLPVECRQFGGHKIWARIHQEMLQGRRKLLGGESLEDWILRNEDGMPAPGWCAKYIAENDPAELQSTHAIFKIETSTVTVRLNAGVNYQGNGELDWDGRVLPDLEFWQMDVGMRGLDVDNPALSGLLGETARPVYDENGQAVMKGSKAFRGSVEDYRVSGALGVHFPLLDDKEEGHE 1465
VCP GD CGDPHM GL GQRI+WSGVDGGWYSLIKDDN D+N+NVR+TAPLPDEFPDRQLMTSLAV+S+GHS+VI+V NPYT+ T+GCPE VSPCLANGGL IIVD Q+VDELLRFSR +PVADGAMTVS+SNLPVEC+QFGG +IWAR++Q+M++GRR+L G ESLE+WIL+ + GM APGWCAKYIAEND A+LQS HAIFKI+T TVTVRLNAGVNYQGNGEL+WDGRVLPDLEFWQM VGM GLDVDNPALSGLLGETARPVYDENGQ VM+G AFRG++EDYRVS AL VHFPLLD+KEEGHE
Sbjct: 104 VCPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKGHSVVIEVENPYTVVTNGCPEGVSPCLANGGLRIIVDSQQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQDMIEGRRELHGDESLEEWILKYDHGMAAPGWCAKYIAENDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHFPLLDEKEEGHE 413
BLAST of mRNA_Ecto-sp8_S_contig1102.1394.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI) HSP 1 Score: 530 bits (1364), Expect = 3.100e-181 Identity = 250/307 (81.43%), Postives = 280/307 (91.21%), Query Frame = 2
Query: 545 NGDVDCGDPHMAGLLGQRINWSGVDGGWYSLIKDDNADLNVNVRVTAPLPDEFPDRQLMTSLAVVSEGHSLVIQVANPYTIDTDGCPERVSPCLANGGLSIIVDGQEVDELLRFSREMPVADGAMTVSASNLPVECRQFGGHKIWARIHQEMLQGRRKLLGGESLEDWILRNEDGMPAPGWCAKYIAENDPAELQSTHAIFKIETSTVTVRLNAGVNYQGNGELDWDGRVLPDLEFWQMDVGMRGLDVDNPALSGLLGETARPVYDENGQAVMKGSKAFRGSVEDYRVSGALGVHFPLLDDKEEGHE 1465
N D GDPHM GL GQRINWSGVDGGWYSL+KDD+ADL++NVRVTAPLPDEFPDRQLMTSLA++SEG+S+VI+V NPYTI T GCPE VSPCLANGGL IIVDGQEVDELLRFSR+MPVADG MT+SASNLPVECRQFGGH+IWAR++Q++L+ RR+L GGESLE+WILR + MPA WCAKYIAEND A+LQ+ HAIFKI+T TVTVRLNAGVNYQG+GEL+WDGRVLPDLEFWQMDVG+ GLDVDNPALSGLLGETARPVY ENG+AVM+GS AFRG+VEDYRVS ALGVHF LLD+KEEGHE
Sbjct: 8 NADDMWGDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVENPYTIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVADGTMTMSASNLPVECRQFGGHRIWARMYQDILEDRRQLRGGESLEEWILRYDQNMPARRWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHFALLDEKEEGHE 314
BLAST of mRNA_Ecto-sp8_S_contig1102.1394.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE) HSP 1 Score: 466 bits (1200), Expect = 9.600e-157 Identity = 225/307 (73.29%), Postives = 253/307 (82.41%), Query Frame = 2
Query: 545 NGDVDCGDPHMAGLLGQRINWSGVDGGWYSLIKDDNADLNVNVRVTAPLPDEFPDRQLMTSLAVVSEGHSLVIQVANPYTIDTDGCPERVSPCLANGGLSIIVDGQEVDELLRFSREMPVADGAMTVSASNLPVECRQFGGHKIWARIHQEMLQGRRKLLGGESLEDWILRNEDGMPAPGWCAKYIAENDPAELQSTHAIFKIETSTVTVRLNAGVNYQGNGELDWDGRVLPDLEFWQMDVGMRGLDVDNPALSGLLGETARPVYDENGQAVMKGSKAFRGSVEDYRVSGALGVHFPLLDDKEEGHE 1465
N D GDPHM GLLGQR+NWSG DGGWYSLIKDDNADL++NVRVTAPLPDEFPDRQLMTSLA++SEG+S+VI+V NPYT DT GCPE VSPC ANGGL IIVDG EVDELLRFSR+MP GG +IWAR++Q++L+GRR+L GGESLE+WILR + MPA WCAKYIAEND A+LQ+ HAIFKI+T TVTVRLNAGVNYQ NGEL+WDGRVLPDLEFWQ+DVG+ GLDVD PALSGL GETA PVYDENG+AVM+G AFRG+VEDYRVS ALGVHF LLD+ E GHE
Sbjct: 13 NADHIWGDPHMRGLLGQRVNWSGFDGGWYSLIKDDNADLHINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVKNPYTTDTGGCPEDVSPCHANGGLRIIVDGHEVDELLRFSRQMP--------------------GGKRIWARMYQDILEGRRQLRGGESLEEWILRYDQNMPARTWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGIDGLDVDKPALSGLFGETACPVYDENGKAVMEGYDAFRGAVEDYRVSSALGVHFALLDETENGHE 299
BLAST of mRNA_Ecto-sp8_S_contig1102.1394.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE) HSP 1 Score: 369 bits (948), Expect = 1.280e-113 Identity = 182/307 (59.28%), Postives = 225/307 (73.29%), Query Frame = 2
Query: 536 VCPNGDVDCGDPHMAGLLGQRINWSGVDGGWYSLIKDDNADLNVNVRVTAPLPDEFPDRQLMTSLAVVSEGHSLVIQVANPYTID-TDGCPE-RVSPCLANGGLSIIVDGQEVDELLRFSREMPVADGAMTVSASNLPVECRQFGGHKIWARIHQEMLQGRRKLLGGESLEDWILRNEDGMPAPGWCAKYIAENDPAELQSTHAIFKIETSTVTVRLNAGVNYQGNGELDWDGRVLPDLEFWQMDVGMRGLDVDNPALSGLLGETARPVYDENGQAVMKGSKAFRGSVEDYRVSGALGVHFPLLDDK 1450
+CP G C DPHM GLLGQ I+W GVDG WYS +KD + DL VNVR+TAPLPD+FPDRQL+T L+V+SEGHSLV++V NPY+ D DGCP+ +PCLANGGLS+ VDG++ L+ R + G + VSA NLPV+C QFGGHKIWAR H E + RRKL +S EDW+L D M A WC +YI+E +QS+HAI++I T V VRLN G+ +Q E+DWDGRVLPDL+ WQMDVG+ GL ++N AL+G+LGETARPVYDE+G AVM G A+RG+ EDYRVSG LG+ F LL K
Sbjct: 394 ICPKGSHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVISEGHSLVLEVTNPYSTDLNDGCPDGSPTPCLANGGLSVTVDGEKNVGLIHPIRG-EILPGGIEVSADNLPVQCWQFGGHKIWAR-HYEAILARRKLRA-QSFEDWVLSFTD-MAAHDWCTEYISEKGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMAGDDAYRGTPEDYRVSGPLGMDFALLHQK 696
BLAST of mRNA_Ecto-sp8_S_contig1102.1394.1 vs. uniprot
Match: A0A6H5JP35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP35_9PHAE) HSP 1 Score: 324 bits (830), Expect = 1.190e-100 Identity = 167/303 (55.12%), Postives = 222/303 (73.27%), Query Frame = 2
Query: 560 CGDPHMAGLLGQRINWSGVDGGWYSLIKDDNADLNVNVRVTAPLPDEFPDRQLMTSLAVVSEGHSLVIQVANPYTIDT-DGCPERV-SPCLANGGLSIIVDGQ-EVDE--LLRFSREMPVADGAMTVSASNLPVECRQFGGHKIWARIHQE-MLQGRRKLLGGESLEDWILRNEDGMPAPGWCAKYIAENDPAELQSTHAIFKIETSTVTVRLNAGVNYQGNGELDWDGRVLPDLEFWQMDVGMRGLDVDNPALSGLLGETARPVYDENGQAVMKGSKAFRGSVEDYRVSGALGVHFPLLDDK 1450
C D + LLGQ I+W G+DGGWYSL++D + DLNVNVR+TAP P+EFPDRQL+T L+V++ GHSLVI+V PY DT GCP+ +PCLANGGLS+IVDG+ E D+ LL R+ + G + VSA+NLPV+C QFGG KI AR + +++GRR LL E+ E+W+L + M A WC +YIA D +++QS AI++I T V VR N G+ +Q G ++ DGR++PDL+ W+MDVG+ GL ++N L+G+LGETARPV DE+G+AVMKG+KA+RG+ EDYRVSGALG F LL K
Sbjct: 54 CTDTYAV-LLGQSIDWFGIDGGWYSLVQDPDIDLNVNVRLTAPPPEEFPDRQLVTGLSVMAGGHSLVIEVTKPYDTDTAGGCPDGAPAPCLANGGLSVIVDGEKEADDSPLLHTIRDETLP-GGIQVSAANLPVQCWQFGGDKISARHYANTIMEGRRHLLS-ETFEEWVLSFQH-MAAHDWCTEYIAHKDLSDVQSAQAIYQIITPEVVVRFNVGIGHQTGGHVEMDGRIVPDLDVWEMDVGLAGLSLENETLTGILGETARPVLDEHGRAVMKGNKAYRGTPEDYRVSGALGTDFALLRQK 352
BLAST of mRNA_Ecto-sp8_S_contig1102.1394.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE) HSP 1 Score: 259 bits (661), Expect = 2.320e-76 Identity = 140/301 (46.51%), Postives = 185/301 (61.46%), Query Frame = 2
Query: 563 GDPHMAGLLGQRINWSGVDGGWYSLIKDDNADLNVNVRVTAPLPDEFPDRQLMTSLAVVS-EGHSLVIQVANPYTIDTDGCPERVSPCLANGGLSIIVDGQEVDELLRFSREMPVADGAMTVSASNLPVECRQFGGHKIWARIHQEM--LQGRRKLLGGESLEDWILRNEDGMPAPGWCAKYIAE---NDPAELQSTHAIFKIETSTVTVRLNAGVNYQGNGELDWDGR--VLPDLEFWQMDVGMRGLDVDNPALSGLLGETARPVYDENGQAVMKGSKAFRGSVEDYRVSGALGVHFPLL 1441
GD HM GLLGQ I+W G D GWY L+ N++ VN RVTAP+PDEFP RQL++ +++ S EG SLV++V NP T +T+GC +PCLA G L I+VDG E L + + G + VS++NLP ECR FGG +IWA M GRR L G DW+L D M APGWCA + E + + +QS AI ++ET VTVR++ GVNYQ + L DG ++P+L+FWQ D+ L L G+LG+TAR V D++G+ + G +A RG VE RVSG LGV F +
Sbjct: 9 GDSHMVGLLGQEIDWYGEDSGWYCLLV--NSEFQVNARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNPITTETEGCSSTSAPCLAEGALRILVDGDESHALQSPVENLVLPGGDLVVSSANLPAECRPFGGDRIWAAQFAAMNDASGRRSLRGHTPFADWVLE-ADTMAAPGWCALFAREQRLSGLSSVQSNRAILRVETGGVTVRVDVGVNYQ-DSVLSSDGNAVLVPELDFWQTDIAFEELRPSGE-LGGMLGDTARYVIDDDGKPITSGMEALRGPVETCRVSGPLGVDFEQM 304
BLAST of mRNA_Ecto-sp8_S_contig1102.1394.1 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE) HSP 1 Score: 221 bits (563), Expect = 1.000e-60 Identity = 165/474 (34.81%), Postives = 228/474 (48.10%), Query Frame = 2
Query: 104 MWRTVFVLPLCTLIVAIYSARSTSATGSCECGGPTQGSPANTTLDAAQCAVVTADGCYNPDQPLCDCSTATS-----------TANPPGNWWCDHNG----IAKCVECLDDDDCEDPE--ICCTEVSYKYCGTEDPDEPGTCEPLPTXXXXXXXXXXXXXPVCPNGDVDCGDPHMAGLLGQRINWSGVDGGWYSLIKDDNADLNVNVRVTAPLPDEFPDRQLMTSLAVVS---EG--HSLVIQVANPYTIDTDGCPERVSPCLANGGLSIIVDGQEVDELLRFSREMPVADGAMTVSASNLPVECRQFGGHKIWARIHQEMLQGRRKL---LGGESLEDWILRNEDGMPAPGWCAKYI------AENDPAELQSTHAIFKIETSTVTVRLNAGVNYQGNGELDWDGRVLPDLEFWQMDVGMRGLDVDNPALSGLLGETARPVYDENGQAVMKGSKAFRGSVEDYRVSGALGVHF 1432
MW V++LPLCT++VA +SA S + +C CGGPT SP+ +D QC ADG + +C C+ S T + +W+CDH G C E D DC E ICC E G C PT CGDPHM G LGQ+ ++ G DG WY+++ D DL VN+RVT+P+P E P+ +T L + + EG HSLVI V +P+++D+ CP + S CLA+G L++ +DG D L E + G + +SA NLP CR FG K W R E + R+L L + + DWIL + C +Y+ + E S H F+I T T+RL+ G +Q D +PD WQM++ +D+ A +G+LGET + D NG +M+G A RGS EDY V G L F
Sbjct: 1 MWAKVWILPLCTMMVATFSA-SFAFGQTCSCGGPTVDSPSVADIDVLQCGA--ADGTTDCGGNICVCNYDISIDVDLVAFLAGTGDVSISWYCDHGGNDGYCTTCTEATQDTDCPTDEKPICCPET-------------GLCSHEPTDDDAGA----------------CGDPHMTGFLGQKFDFVGQDGEWYAVVSD-MPDLEVNMRVTSPVPAE-PEITYITGLGIKTRDIEGLDHSLVITVTDPHSLDS-ACPVQGSTCLADGALTVELDG---DVALLSPGEAELGPG-VAISAVNLPGACRSFGFEKYWERKKAEYVASGRRLNNDLQMQEMSDWILGDPTATNMAE-CTEYVLGATVDGQAGLFEYDSEHTSFQIVTPKGTIRLSHGRLHQLAMRDPTDRFDIPDHLTWQMNLAFDNVDLAVDA-TGILGETQQHTLDANGNPIMEGMAAIRGSQEDYLVDGPLDNVF 433
BLAST of mRNA_Ecto-sp8_S_contig1102.1394.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE) HSP 1 Score: 200 bits (508), Expect = 1.790e-51 Identity = 126/304 (41.45%), Postives = 172/304 (56.58%), Query Frame = 2
Query: 554 VDCGDPHMAGLLGQRINWSGVDGGWYSLIKDDNADLNVNVRVTAPLPDEFPDRQLMTSLAVVSEG-----HSLVIQVANPYTIDTDGCPERVSPCLANGGLSIIVDGQEVDELLRFSREMPVADGA-MTVSASNLPVECRQFGGHKIWARIHQEMLQGRRKLLGGESLEDWILRNEDGMPAPGWCAKYIAENDPAE-----LQSTHAIFKIETSTVTVRLNAGVNYQGNGELDWDGRVLPDLEFWQMDVGMRGLDVDNPALSGLLGETARPVYDENGQAVMKGSKAFRGSVEDYRVSGALGVHF 1432
V CGDPHM G LGQ+ +++G DGGWYS+I D N +NVN+RVT+P+ D P+ +T L+V++ HS+VI+V +P+ +D+ CP VSPCL +G L +++DG E VA GA + VSA+NLP CR FG K W R E + R L S+ +WIL + C +Y+A + E QS H F+I T TVRL+ G +Q D LPD WQM++ + DV + A G+LG+T P D +G+ +M G +A RGS EDYRV GALGV F
Sbjct: 315 VICGDPHMTGFLGQKFDFTGEDGGWYSVIADSN--MNVNMRVTSPVAD-LPEITYITGLSVLTTDTDGLEHSIVIEVIDPHNLDSS-CPAGVSPCLGDGALVVLLDGVE-----SLFAPGTVALGADVEVSAANLPGACRSFGFEKYWERKKLENARAGRLLRTTPSMGEWILGDPTATNM-NECVEYVARAEAEEGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAA-KGILGQTFVPTRDADGKPIMTGLEAIRGSEEDYRVDGALGVDF 607
BLAST of mRNA_Ecto-sp8_S_contig1102.1394.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE) HSP 1 Score: 186 bits (472), Expect = 3.420e-45 Identity = 141/411 (34.31%), Postives = 203/411 (49.39%), Query Frame = 2
Query: 266 DGC-YNPDQPLCDCSTA---TSTANPPGNWWCDHNGIAKCVE----CLDDDDCEDPEICCTEVSYKYCGTEDPDEPGTCEPLPTXXXXXXXXXXXXXPVCPNGDVDCGDPHMAGLLGQRINWSGVDGGWYSLIKDDNADLNVNVRVTAPLPDEFPDRQLMTSLAVVS-----EGHSLVIQVANPYTIDTDGCPERVSPCLANGGLSIIVDGQEVDELLRFSREMPVADGAMTVSASNLPVECRQFGGHKIWARIHQEMLQ-GRRKLLGGESLEDWILRNEDGM---PAPGWCAKYIAENDPAEL---QSTHAIFKIETSTVTVRLNAGVNYQGNGELDWDGRVLPDLEFWQMDVGMRGLDVDNPALSGLLGETARPVYDENGQAVMKGSKAFRGSVEDYRVSGALGVHFPL 1438
D C YN + LC C + T+ + C + + CVE C DD DC PE CC + C DP +P CGDPHM G GQ+ +++G DG WY LI D +++N+RVT+P+ PD +T L++++ + HS++I V +PY++D+D C VSPCLA+G L +++DG E L + +A M VSA N+P CR FG K W R E Q G R+L +S+ +WIL + + A++IA + +L QS HA F+I T +RL+ G +Q + G LPD WQM++ + DV A G+LGET P +G+ +M G +A RG+ EDY V G LG+ F L
Sbjct: 704 DNCDYNTQRCLCTCRESDPFTALCGSGTGFDC-LDSASDCVEEPTACEDDSDCTLPEECC--LLKLVCEVADPTDPTA----------------------------CGDPHMTGFHGQKFDFTGNDGQWYCLISD-LPSMHLNMRVTSPVSSR-PDITYITGLSLITTDGDGQEHSIIISVKDPYSLDSD-CSPGVSPCLADGSLIVVLDGNET---LLAPGAVELASDVM-VSAVNIPGACRSFGFEKYWERKKLEYAQAGGRRLSVQQSMGEWILGDPTATNMAECTEYVARHIAGGEDGDLFTHQSEHASFQIVTPAAIIRLSHGRLHQ----IAQFG--LPDHMTWQMNLAVDHNDVSLNA-KGVLGETMVPTRTVSGEYIMHGMEAIRGTQEDYHVEGPLGLDFTL 1069
BLAST of mRNA_Ecto-sp8_S_contig1102.1394.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI) HSP 1 Score: 177 bits (449), Expect = 5.450e-44 Identity = 98/250 (39.20%), Postives = 149/250 (59.60%), Query Frame = 2
Query: 566 DPHMAGLLGQRINWSGVDGGWYSLIKDDNADLNVNVRVTAPLPDEFPDRQLMTSLAVVSEG-HSLVIQVANPY--------TIDTDGCPERVSPCLANGGLSIIVDGQEVDELLRFSREMPVADGAMTVSASNLPVECRQFGGHKIWAR--IHQEMLQGRRKLLGGESLEDWILRNEDGMPAPGWCAKYIAENDP-----AELQSTHAIFKIETSTVTVRLNAGVNYQGNGELDWDGRVLPDLEFWQMDV 1267
DPH+ GL GQ +W G DGGWY+ + + L +N+RVT+ LP FP+RQL+T +A+V+EG H++ + +P T+D G +PCL NGGL I VDG+E L+ + E DG + ++A NLP+EC++FG + +W + Q + G R L E++ DW++ + M AP WC KY+ E + A ++S+HA+ +I T +++R+N G+N + L DGRV+P FWQMDV
Sbjct: 245 DPHLTGLRGQHFDWYGQDGGWYAFLSTPDQ-LQMNLRVTSHLPATFPERQLVTGVALVTEGGHTITADIVDPLDLAPTCHGTVDAVGS----APCLVNGGLRITVDGREQ---LQGAGEYDF-DGDIHITAVNLPLECQRFGDYMMWGDLDVEQRLRGGSRSLRSAETVFDWLVA-DSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTEREQTLQ-DGRVVPTASFWQMDV 483 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1102.1394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1102.1394.1 >prot_Ecto-sp8_S_contig1102.1394.1 ID=prot_Ecto-sp8_S_contig1102.1394.1|Name=mRNA_Ecto-sp8_S_contig1102.1394.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=455bp MWRTVFVLPLCTLIVAIYSARSTSATGSCECGGPTQGSPANTTLDAAQCAback to top mRNA from alignment at Ecto-sp8_S_contig1102:2314..16460- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1102.1394.1 ID=mRNA_Ecto-sp8_S_contig1102.1394.1|Name=mRNA_Ecto-sp8_S_contig1102.1394.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=14147bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1102:2314..16460- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1102:2314..16460- >mRNA_Ecto-sp8_S_contig1102.1394.1 ID=mRNA_Ecto-sp8_S_contig1102.1394.1|Name=mRNA_Ecto-sp8_S_contig1102.1394.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1365bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1102:2314..16460- (Ectocarpus species8 EcLAC_412)back to top |