mRNA_Ecto-sp8_S_contig11013.1385.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig11013.1385.1
Unique NamemRNA_Ecto-sp8_S_contig11013.1385.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig11013.1385.1 vs. uniprot
Match: D7G111_ECTSI (Glycine/D-amino acid oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G111_ECTSI)

HSP 1 Score: 615 bits (1587), Expect = 4.180e-222
Identity = 309/315 (98.10%), Postives = 310/315 (98.41%), Query Frame = 1
Query:    1 KGLLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFVGTALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDPDAVDTFCPDVLNTGVKPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGRKPPASGAGTGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGVGVQYFWEAFPAGSGPGDRLRHRTLHSSPPKRTLGLSFNESSRDCSKKQRR 945
            +GLLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFV TALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDPDAVDTFCPDVLNTGVKPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPG KPPASGA TGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGVGVQYFWEAFPAGSGPGDRLRHRTL SS PKRTLGLSFNESSRDCSKKQRR
Sbjct:   20 QGLLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFVATALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDPDAVDTFCPDVLNTGVKPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGGKPPASGAATGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGVGVQYFWEAFPAGSGPGDRLRHRTLPSSSPKRTLGLSFNESSRDCSKKQRR 334          
BLAST of mRNA_Ecto-sp8_S_contig11013.1385.1 vs. uniprot
Match: A0A6H5L433_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L433_9PHAE)

HSP 1 Score: 559 bits (1441), Expect = 7.240e-195
Identity = 281/298 (94.30%), Postives = 286/298 (95.97%), Query Frame = 1
Query:    1 KGLLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFVGTALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDPDAVDTFCPDVLNTGVKPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGRKPPASGAGTGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGVGVQYFWEAFPAGSGPGDRLRHRTLH-SSPPKRT 891
            +GLLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFV TALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDP AVDTFCPDVLNTGVKPSLLVDRARRRFE KGGVVMEFTSIDGVSVRPDGVALSTSPSSPPG KPPASGAGTGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGVGVQYFWEAFPAGSGPGDR  +   +  + P+RT
Sbjct:  118 QGLLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFVATALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDPGAVDTFCPDVLNTGVKPSLLVDRARRRFETKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGSKPPASGAGTGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGVGVQYFWEAFPAGSGPGDRTTYMFAYMDADPRRT 415          
BLAST of mRNA_Ecto-sp8_S_contig11013.1385.1 vs. uniprot
Match: A0A7S4DCS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCS5_HETAK)

HSP 1 Score: 294 bits (753), Expect = 3.620e-92
Identity = 155/289 (53.63%), Postives = 191/289 (66.09%), Query Frame = 1
Query:    1 KGLLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFVGTALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDPDAVDTFCPDVLNTGVKPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGRKPPASGAGTGE---EVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGVGVQYFWEAFPAGSGPGDRLRH 858
            +GLLR DA W A+RNMK G  AGPAP +V E         P  +DVVV GGTLG+F   ALQ+ G +V VVERGPL GR Q+WNI+  EL  +V A VLS+E+AE  +SI FNP+RAGFK  E DPD  + +  DVLN GV    LV+ A  RF A GG V+EF +  G++V  +   L+              G+G  E   EV ++LVLDCMG ASP+VRQ+R G+KP+GVCLVVGSC RGY  + NKSGDIIYAN P+++K  G  VQYFWEAFPAG+GP DR  +
Sbjct:   20 EGLLRMDATWKAIRNMKEGAAAGPAPVFVRERRGEAWGGGPTEYDVVVAGGTLGVFQACALQLAGLKVAVVERGPLRGRNQDWNIARKELWGLVRAGVLSEEEAEAAISIEFNPMRAGFKLGEDDPDGFEVYMDDVLNLGVSAVKLVEAAAARFRAAGGTVLEFAATTGITVYDNAAVLTLE------------GSGGDEIVREVGTKLVLDCMGMASPIVRQLRHGQKPDGVCLVVGSCGRGYPEENNKSGDIIYANTPVMEKESGSSVQYFWEAFPAGTGPTDRTTY 296          
BLAST of mRNA_Ecto-sp8_S_contig11013.1385.1 vs. uniprot
Match: A0A7S0KT21_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KT21_MICPS)

HSP 1 Score: 287 bits (734), Expect = 1.460e-88
Identity = 161/293 (54.95%), Postives = 195/293 (66.55%), Query Frame = 1
Query:    7 LLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFVGTALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAE-----GDPDAVDT--FCPDVLNTGVKPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGRKPPASGAGTGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPI--LDKGDGVGVQYFWEAFPAGSGPGDRLRH 858
            L R D  W ++RNM  GD AGPAP +VTES   L   N   +DV VCGGTLGI V TALQ RG RV V+ERGPL GR+QEWNIS  ELE +V   VL++   +E ++  FNP+R GF   E     GD  A++      D+LNTGVKPSLL+D  R  FEAKGGVV+E T+I G+SVRPDG  L TSP           G G G  +T+RLV+DCMG ASP+VRQ RWG+KP+GVCLVVG+CARG++   N+S D+IY    I  +D+  G   QYFWEAFPAGSGP DR  +
Sbjct:   86 LRRVDGVWRSIRNMPEGDAAGPAPVFVTESSVRLDT-NRCDYDVAVCGGTLGILVATALQARGQRVVVIERGPLRGRDQEWNISRPELESLVALGVLTQAQCDEVITKEFNPIRCGFYDGESGAPSGDASAIEPAIVTKDILNTGVKPSLLLDAIRGNFEAKGGVVLEKTAISGISVRPDGAELDTSPLD--------GGDGPGG-ITARLVVDCMGFASPIVRQARWGQKPDGVCLVVGACARGFDESANESADLIYTTTDITAIDQSKG---QYFWEAFPAGSGPEDRTTY 365          
BLAST of mRNA_Ecto-sp8_S_contig11013.1385.1 vs. uniprot
Match: A0A8J9RAY4_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RAY4_9CHLO)

HSP 1 Score: 272 bits (695), Expect = 3.510e-83
Identity = 149/290 (51.38%), Postives = 194/290 (66.90%), Query Frame = 1
Query:    7 LLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFVGTALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDPDAVDTFCPDVLNTGVKPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGRKPPASG-----AGTGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGV-GVQYFWEAFPAGSGPGDRLRH 858
            L +AD  W  LR  +     GPAP +V   D PL A  PP FDVV+CGGTLGIF+  ALQ+ G RV VVERGPL GREQEWNIS  EL E+VE  ++S E+AEEC+S+ FNP+RAGF   E      D +  DVLN GV+P  L+ + ++RFEA GG V+E T  +GV+V P+G+ L   P++   +   ++G     A  G  +T RL++DCMGN SP+VRQ RWG++P+GVCLVVG+C+RG+  +T  +GD+IY N P   +   V  VQYFWEAFP+GSGP DR  +
Sbjct:   87 LRKADEAWKRLRTAQMN---GPAPEFVRTVDQPLQA--PPHFDVVMCGGTLGIFLACALQLSGLRVAVVERGPLRGREQEWNISRKELMELVEEGLVSGEEAEECISVEFNPVRAGFHGGE------DVWTRDVLNLGVRPDKLIAKVKQRFEAAGGTVLELTGAEGVAVHPNGIFLDI-PTNDKVQAQASNGSQQESAAGGAGITGRLLIDCMGNFSPIVRQARWGQRPDGVCLVVGTCSRGFQHNT--TGDVIYTNMPTRSEDAAVPNVQYFWEAFPSGSGPTDRTTY 362          
BLAST of mRNA_Ecto-sp8_S_contig11013.1385.1 vs. uniprot
Match: W7TPM3_9STRA (Fad dependent oxidoreductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPM3_9STRA)

HSP 1 Score: 268 bits (684), Expect = 1.060e-81
Identity = 146/288 (50.69%), Postives = 189/288 (65.62%), Query Frame = 1
Query:    7 LLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFVGTALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDPDAVDTFCPDVLNTGVKPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGRKPPASGAGTGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGVGVQYFWEAFPAGSGPGDRLRHRTLH 870
            L   D  W A+   KTG  +G APT+V E+D PL     P FDV+V GGTLGIF+ TALQ +GFRV VVERGPL GR QEWNIS  E+ E+VE  VLSKED E+ + I FNP+R GF   + +P  + T   DVL+ GV PS+L+ RA+ RF A GGVV E T I G+ + P+G A+    +   G          GEE+T RLV+DCMGN SP+ RQ R G++P+G+C+VVG+CA G++P  N   D++Y+N P +DKG    V +FWEAFPA SGPGDR  +  ++
Sbjct:   83 LEAIDRAWEAV---KTGRASGEAPTFVRETDVPLSTS--PKFDVIVAGGTLGIFMATALQRKGFRVCVVERGPLRGRTQEWNISRKEMMELVEEGVLSKEDVEDAIGIDFNPIRVGFVGEKNEPYTLWT--QDVLHLGVSPSVLLARAQSRFLAAGGVVHENTPIQGIRIAPNGAAVEVKSTEMMG----------GEELTGRLVIDCMGNQSPISRQARAGQQPDGICIVVGTCASGFDPARNTYADLLYSNTPTMDKGVSQ-VHWFWEAFPASSGPGDRTTYLFMY 352          
BLAST of mRNA_Ecto-sp8_S_contig11013.1385.1 vs. uniprot
Match: A0A1Y1HH77_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HH77_KLENI)

HSP 1 Score: 265 bits (677), Expect = 1.050e-80
Identity = 143/290 (49.31%), Postives = 187/290 (64.48%), Query Frame = 1
Query:    7 LLRADAGWTALRNMKTGDDAGPAPTYVTESDTPL------GAENPPAFDVVVCGGTLGIFVGTALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDPDAVDTFCPDVLNTGVKPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGRKPPASGAGTGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGVGVQYFWEAFPAGSGPGDRLRH 858
            L RAD  W  +R MKTG +AGPAP  V E           G EN   +DVVVCGGTLG+F+ TALQ+RG RV +VERG L+GR QEWNIS+ E++ +VE  VL++E+ E+ +SI FNP R GF       +       DVLN GV P+ L++ A+RRF  +GGV++E T ++ V V  DG  L+       G K          ++ ++LV+D MG+ASP+VRQ+RWG+KP+GVCLVVG+CARG+  +TN  GD+I  N P   KG    +QYFWEAFPAGSGPGDR  +
Sbjct:   76 LKRADQNWARIRTMKTGREAGPAPETVKERRGSWRDVGTSGQENLGVYDVVVCGGTLGVFLATALQLRGKRVAIVERGVLMGRAQEWNISKQEMQSLVEMGVLTQEEVEDSISIEFNPGRCGFY------NGTQILVNDVLNLGVSPAKLIESAKRRFVERGGVLLEKTGLENVDVFADGAVLNL------GEK----------KLVAKLVIDAMGHASPIVRQLRWGRKPDGVCLVVGACARGFPEETNTGGDVILTNAPATRKGRSP-LQYFWEAFPAGSGPGDRTTY 342          
BLAST of mRNA_Ecto-sp8_S_contig11013.1385.1 vs. uniprot
Match: A0A836CJX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX3_9STRA)

HSP 1 Score: 251 bits (641), Expect = 1.570e-80
Identity = 122/171 (71.35%), Postives = 140/171 (81.87%), Query Frame = 1
Query:  343 LRAGFKRAEGDPDAVDTFCPDVLNTGVKPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDG--VALSTSPSSPPGRKPPASGAGTGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGVGVQYFWEAFPAGSGPGDR 849
            +RAGFKR EGDP+ VDTFCPDVLN GVKPS++V RAR RFEA GGVVME  +I GVSVRP+G  VA++T P+  P              VT+RLVLDCMGN SPMVRQIRWG+KP+G+CLVVG CARG++P+TN SGDIIYAN+P+LDKGDGVGVQYFWEAFPAGSGPGDR
Sbjct:    1 MRAGFKRKEGDPNGVDTFCPDVLNLGVKPSVMVQRARARFEAAGGVVMEQAAISGVSVRPNGASVAVATGPADKP----------VTSNVTARLVLDCMGNGSPMVRQIRWGRKPDGMCLVVGCCARGFDPETNTSGDIIYANSPVLDKGDGVGVQYFWEAFPAGSGPGDR 161          
BLAST of mRNA_Ecto-sp8_S_contig11013.1385.1 vs. uniprot
Match: A0A5J4Y8J5_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y8J5_9CHLO)

HSP 1 Score: 260 bits (665), Expect = 5.130e-79
Identity = 141/304 (46.38%), Postives = 187/304 (61.51%), Query Frame = 1
Query:    7 LLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFVGTALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDPDAVDTFCPDVLNTGVKPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGRKPPASGAGTGEEVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIYANNPILDKGDGV-GVQYFWEAFPAGSGPGDRLRHR-TLHSSPPKRTLGLSFNE 912
            L  ADA W   +  K G   GP P +V E  TPL       +DV++CGGTLGIF+  +LQ++G +V VVERGPL GR+QEWNIS  EL+E+V   +LS ++ +EC+SI FNP+RAGF  ++      + +  DVLN GVKP +L+ + R +FEA GG V E T   GV V PDGVAL                     +VT +L++DCMGN SP+VRQ+RWG KP+GVC+VVGSC RG+  D N +GD+I+ N+PI      +  +Q FWEAFP+GSG  DR  +  T   + P R   L+  E
Sbjct:   98 LQGADAAWAKAKAQKAGKPQGPPPNFVQEVQTPLSQSV--QYDVIMCGGTLGIFLACSLQLKGLKVAVVERGPLQGRQQEWNISRKELQELVHEGLLSTDEVDECISIEFNPVRAGFHGSQ------EVWTRDVLNLGVKPDMLIAKMRHKFEAAGGKVFERTVAQGVRVHPDGVALQLQADQ--------------HDVTGQLIIDCMGNFSPIVRQVRWGHKPDGVCMVVGSCCRGF--DDNTTGDVIFTNDPIQPASSVIPDLQCFWEAFPSGSGATDRTTYMFTYADAQPTRPSLLAMME 377          
BLAST of mRNA_Ecto-sp8_S_contig11013.1385.1 vs. uniprot
Match: A0A2P6V886_9CHLO (Fad dependent oxidoreductase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V886_9CHLO)

HSP 1 Score: 258 bits (659), Expect = 2.800e-78
Identity = 150/305 (49.18%), Postives = 191/305 (62.62%), Query Frame = 1
Query:    7 LLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFVGTALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDPD--AVDTFCPDVLNTGVKPSLLVDRARRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGRKPPASGAGTGEE-VTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGDIIY--ANNPILD----------------KGDGVGVQYFWEAFPAGSGPGDRLRH 858
            L R DAGW +LR  K     GP P YV  +   LGA   P +D VVCGGTLGIF+  ALQ+RG +V VVERGPLLGR QEWNIS  EL E+VE  VL++E+AE  VS+ FNP+R GF    G+P   + + +  DVLN GV P+ L++ ARRRFEA GG V+E T + GV V  DGV L                   G++ +T+RL+LDCMG+ASP+V+QIRWG+KP+GVCLVVGSCARG++P  N +GD+I+  +++P                     D    Q +WEAFPAGSGP DR  +
Sbjct:   23 LRRTDAGWESLRTRKLW---GPRPEYVRLARDSLGAA--PQYDAVVCGGTLGIFLACALQLRGLKVAVVERGPLLGRAQEWNISRKELAELVEQGVLTQEEAEGSVSVEFNPVRIGFY---GEPPRGSTEVWTRDVLNLGVSPARLIEAARRRFEAAGGQVLERTGLQGVWVHRDGVCLQLDGGGAXXXXXXXXXXXXGQQQLTARLLLDCMGHASPIVQQIRWGRKPDGVCLVVGSCARGFDPAANTTGDVIWTCSDSPPXXXXXXXXXXXXXXXDGWSSDVHNAQLYWEAFPAGSGPADRTSY 319          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11013.1385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G111_ECTSI4.180e-22298.10Glycine/D-amino acid oxidase-like protein n=1 Tax=... [more]
A0A6H5L433_9PHAE7.240e-19594.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4DCS5_HETAK3.620e-9253.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0KT21_MICPS1.460e-8854.95Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A8J9RAY4_9CHLO3.510e-8351.38Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
W7TPM3_9STRA1.060e-8150.69Fad dependent oxidoreductase n=2 Tax=Monodopsidace... [more]
A0A1Y1HH77_KLENI1.050e-8049.31Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A836CJX3_9STRA1.570e-8071.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5J4Y8J5_9CHLO5.130e-7946.38Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A2P6V886_9CHLO2.800e-7849.18Fad dependent oxidoreductase n=1 Tax=Micractinium ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11013contigEcto-sp8_S_contig11013:845..6325 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score620.9
Seed ortholog evalue3.2e-175
Seed eggNOG ortholog2880.D7G111
Model size951
Hectar predicted targeting categoryother localisation
Exons7
EggNOG OGs28PI8@1,2QW6A@2759
Ec32 ortholog descriptionglycine/D-amino acid oxidase-like protein
Ec32 orthologEc-22_001580.1
Cds size951
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11013.1385.1prot_Ecto-sp8_S_contig11013.1385.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig11013 845..6325 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143187.7441294-CDS-Ecto-sp8_S_contig11013:844..9471681143187.7441294-CDS-Ecto-sp8_S_contig11013:844..947Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11013 845..947 -
1681143187.7534301-CDS-Ecto-sp8_S_contig11013:1021..11531681143187.7534301-CDS-Ecto-sp8_S_contig11013:1021..1153Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11013 1022..1153 -
1681143187.7621315-CDS-Ecto-sp8_S_contig11013:2351..24671681143187.7621315-CDS-Ecto-sp8_S_contig11013:2351..2467Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11013 2352..2467 -
1681143187.7707796-CDS-Ecto-sp8_S_contig11013:3377..35521681143187.7707796-CDS-Ecto-sp8_S_contig11013:3377..3552Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11013 3378..3552 -
1681143187.7796865-CDS-Ecto-sp8_S_contig11013:3824..39431681143187.7796865-CDS-Ecto-sp8_S_contig11013:3824..3943Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11013 3825..3943 -
1681143187.788657-CDS-Ecto-sp8_S_contig11013:5072..51871681143187.788657-CDS-Ecto-sp8_S_contig11013:5072..5187Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11013 5073..5187 -
1681143187.797313-CDS-Ecto-sp8_S_contig11013:6134..63251681143187.797313-CDS-Ecto-sp8_S_contig11013:6134..6325Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11013 6135..6325 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig11013.1385.1

>prot_Ecto-sp8_S_contig11013.1385.1 ID=prot_Ecto-sp8_S_contig11013.1385.1|Name=mRNA_Ecto-sp8_S_contig11013.1385.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=317bp
KGLLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCG
GTLGIFVGTALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLS
KEDAEECVSIRFNPLRAGFKRAEGDPDAVDTFCPDVLNTGVKPSLLVDRA
RRRFEAKGGVVMEFTSIDGVSVRPDGVALSTSPSSPPGRKPPASGAGTGE
EVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARGYNPDTNKSGD
IIYANNPILDKGDGVGVQYFWEAFPAGSGPGDRLRHRTLHSSPPKRTLGL
SFNESSRDCSKKQRRA*
back to top

mRNA from alignment at Ecto-sp8_S_contig11013:845..6325-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig11013.1385.1 ID=mRNA_Ecto-sp8_S_contig11013.1385.1|Name=mRNA_Ecto-sp8_S_contig11013.1385.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5481bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11013:845..6325- (Ectocarpus species8 EcLAC_412)
AAGGGGCTTCTCCGTGCGGACGCGGGGTGGACAGCACTAAGGAACATGAA AACGGGAGACGATGCCGGACCAGCCCCCACCTACGTCACAGAGAGCGACA CGCCGCTCGGTGCGGAAAACCCGCCTGCGTTCGACGTGGTCGTGTGCGGT GGAACCCTTGGCATCTTCGTTGGGACGGCTCTGCAGATGAGGTATCATAC CTACAACGCATGCCCCCCCCTTTCCCCCTTTTTTTTATAGCCTGGCAAGT TTTGATGGCCGAGATTCGAGGCGGGCTGGGTGGTCAGACTTCCGAGCACC CACCAAGACGCTGTGTACAAGGTCAAGGAGCCCAGGCTGAGACCTGTACT GTACACAGCAGCGGCTGTTGGTTGCCCCCATGGAGGACTGAGAACGCGGC CCTCACCCTCGCCGATCGTAAGAGAGGGTCCAATGGCGTGATGGCTGGCT CTGTGTCACACGGGGCCGACTGCTGTGTCGGTGGACAATTAGACGACTGC ATGTGGCTTGAGTGTCGCACCGCTCCAAAGCCCTTGATCAGCACGAAGCC ACTGTCTGGATGTCTGTATACGCTGCTCACCATCCAGTCAGTCGACGTCT TCGAGAAGCCAACTCGTTCCGTAGCTGCCCGCCCGCCCCTTGAGTGCACC CGCTTCCTGCCGGTCAGTCGACCGGCCCGAGAAAATAGAAGAAGTCGCTT CTCTTGTCCCACCTCTCCTCGGACGGACCTTCTCACTCTCTTTGGCGAGC AAGCATCACTTGATCTGCTTTTTATCATCGTCGTCGTCGTTGTTGTTGTT ATTGTTGTTGGTTGGCTGTTTTTTCTTTTTTCATTATTTCGTCTTGAGAT TACTACTTGTTCTGGCCTCCGTGTAGGCAACCAACCCTCAACACCCGCGC TGGTCGCACGATGCGCCTTCTTTTGTTCTTCACACCCAAGCACAATCGCA CAACTTTTTTTTGGCAAATGGTGTTGTTCGCGCCTGCCACACACATGCAA CACACCCCTGTCGGTAGAACCCTTACCCTTTGATTGGACAGTGTTCGTCT TTTTTATCCCGCCACAAGACTGATGTCTCTTTGTTGGTCAGCCAGTTAGC GCGGTCGATGCCATTATAATAAACACCCGCACGTACAGGGGCTTCCGGGT GGGCGTTGTGGAGAGGGGCCCGCTGTTGGGCAGAGAGCAGGAGTGGAACA TCAGCGAGGCCGAGCTGGAGGAGATGGTGGAGGCCGAGGTTTTGAGCAAA GAGGTGAGGCGGTGGGTGGGGCCTCTCGAGCTTGGGCGGGGTGATTCGTG CTTTCCCCTCGCTCGAGGGGGTTTGGAGGTGCAGAACATTTCACACACTT CCGTTATTGTATACGGAAACTCTTACTTTTGCGCCTCGCTCCTCCTCATT TGATCAGAAGGGAAACCAACCAACCGGGAGTACCCACGAAGTAGGTTTTA GTGTGGGTAGGGTTCATAGTTCTAACGTTGCGTGAGAACCAAGCCCTCAA TTTCTTCTCTCTTTGAGTTTCTTGCCGTGGTACATAGCGTTCTGTGTGGT GGAAGGAGGCAGAGAGGGTGCTGGAGTTGATTAGTGTTGCGTGAGTGGGG TAGGGGGGTCTCGCCGCCGTGGGGAGTGAAATGGCGGCGTTGCAGAGGGA AAATAGAGAGGCTGTGCGGTGATGGCGAATGAAAGCGGGGGATGAGAGGT GGTGTGTGTTGCGTCAAATATGTGAGTGATTGGTGGGGTAACGAACATGG TGAGATGAGTCTCAATGCGGACCACCAGCAGTAATATCTCCACGTAAGAA ATTACATGCACGATATCGCATATGGCCTTGAGTTTTCGTGTAACCACACG ATGCAACCGTTCCCCACATCACCAAAACTATGTTGACGATACCGTACCGT GCGATCGCTTTGCTCCTACAGGGAGAAAGCATGCAACACGCGATCTTCTC AAGAGACCGGAAGATTGTAGTGCCACCACCTGCCTATTGACACTTATCAT ACCAGACTCAACTCTCCCCTACGTGGGGTCAGCTTATGACCACGCCAACC GTTTTTTTTTCCTCTGCGAAGAGTAGAGAAGGAGGGGGGAGGTGGTGGAC CGACGTCAAGATGAGGTTTGAATGTATAGACAGCCCCAACAACAACAACA ACAACAACAACATGCGAAGAAGATGTCTGCACAACATACCCCGAAAAAGT ACGCATTTGAAAGCAAACGGCGCCAAACCTGCGACGGGTGTGCCAGAAGT TTATGTTCCGCCGTTACGGAAGTATTTGCGTGCCAGAAAAAGCGAACGAG ATATTCGGAGACGGGACTGCTTGTCTAAGGAAGAACCGCAAATGACACGA GAACGCTCTTCACCACTCCCTCGTTCGTGCAGGACGCAGAGGAATGCGTT AGCATACGCTTCAACCCTTTGCGGGCGGGGTTCAAGAGGGCGGAGGGTGA TCCTGATGCCGTGGACACGTTCTGTCCGGACGTACTCAACACGGGGGTGA AGTGAGTCAACACTCTTCCTATTTAGTTGTTGTTGGTTTTCGTTGGCGAC GGTGTCGTTGTTGTTTTGTGGTATTTGTTGCGGTTGCTGATGCCTTTCCT ATCGCGATCGCTGCTGTCATTTGTCGCTGGTGGAGGTGTTTCTCTGTTGA TGATGTGAGCGCTGATGTCGTTGTTGCTCTTGTTGGTGGTTGCTGCTGCT GCGGTTACTCTTGCCCTTGGCCGACCACCCCGTTTGAGATTTAGCCATCC ACCCAATCCTCACGTTCCCTCAGGCCGTCTCTCTTGGTGGACCGAGCACG TCGGCGTTTCGAGGCCAAGGGAGGGGTCGTCATGGAGTTCACTTCCATCG ACGGCGTAAGCGTAAGGCCAGACGGGGTCGCTCTTTCAACGTCCCCGTCT TCGCCACCGGGGAGGAAACCTCCCGCGTCTGGGGCTGGTACTGGAGAGGT GTGAGCGGTAACCATTACGGTCGTTGAGGGACTGAACGGTTTATTTGCGG AGGAGAGTGCTTGACAGCGAGGATCGCAAGACATATTGCCCAACAATGCG ACACAAACGAACATTACGCCGAAATCAACAAGACGCACGTGCACGCCTCC GGAGGAAGTACGCTGTAGATGATTTCCGTTGCTTTTTTTGGCTGTTCTTG CTTTCGCTGGTGTTGTTGCCTTGCTGCTGGCGGCATTTCTCGCTCCTAAA TCGCCGCACCCACTAACGGCTGACCTTTGGCGATGGCGATGTTACACGAC GGCATCGTCGATGTTCATCTGAGGCTATCCATCTCGTTCACTTTGAATCA AGAGCGGGCGCTTTTCTCTCCGTCTTTCAGTAGCGGGGGTATGCAACTCT CTCACTGGTAGAGAAAGCACTAGGTCTGAACCAATGGTGATGGAGATGTT GCGCAGCCTCTGCATTTCTGAGGGTGGCTTTGTGCGTTGCGTTTTGCCGT CTCCGAAGCTGCTCACTCTGGTGTGTGTGAAATGTTGACGATGGAGGCGC CGTTTTCTGTGTCTCGCTCCCTATTATAGTAAAAACACCCACCGTTTCCT CTCGAACCGACCGTCGTCCTCCCCATCGGAGCCTCTCGAACAGTTCCTTA CCTTTCTCCCCCCTTTCTTGGTTAATTGGCCTATCACCAAAAGAAGACGT CGGCGTCAGTTGGACCGGTACGGATGGTAGAAAGTACTATTATAAGCCGA CACCTTGTTAATGAGAGGACGACAACAACGACAACACCAACAATTAACGA AACCATCACCACCACCAACAACAACAACAACAACAACAACAACAACAACC ACAACCATGCATGCACGTGTCTGCTATCGTGCTCGCTATCGGCGGTGGTT TTGCGAAGGAGGTGACCTCGCGGCTGGTACTCGACTGCATGGGGAACGCC TCGCCGATGGTGCGGCAGATCCGATGGGGCAAGAAACCGGAGGGGGTCTG CCTCGTCGTCGGCTCGTGCGCTAGGTGAGGAGTGCGAACATGATGCGGGT CCACTCTACGTAGTTGTGTTAGGCTATGTAGTACAAGGACTAGGACTGCA ATAGGGTTCCGGTTCCGATTCCGGTCCCGATTCGGTTAATTGACGTTGGC GATGGTGGTCCCGGTGCCGGTTCCGGTTCCGGTTCCGGTTCTGGGCACGA TTATGATGGCGGTTACAGTTTTGTTTACGGCTGACCTTCGTGGGCCGAAA GTTTTCGCACACCATTTGTATCTAGCGATTCTGCTCTGTTCTTTTTTGAC ACGGGGTGGGGACGATTGTCGATCGGATCGGCTTCAACAGCGCGAGGGGT CGTGACAGATAGAGCGTGAATACGGAGATAAGGACCTTTCGTTTTTGTTG CGCGCGGGTTTTGGTCGCCACCATGCAGTGCGCAACCACGCCGCGTCTGT CCCGCTGACACCGACGTCGAATGCCAGCATGAGGCGGACGGGCGCACTGT TTTTTCTCGTCGAAGCTTAGGCAGGCATTACCGCACGGGTCGAGACGCGC TCACCGAGCACTGTTGGTGTTTAGTAGGCGGGCACACTGATGGGCGAAGT GGCCTCGACAATCGCGGGGGGCGATCGATGTATATGTTTTGCATAAAACG AGCAGTTCCTTTCGTTGGACCGCGCGTGCGTTTGTGGTGCATCGGCATGC GCTTGGCGTGTGCGGCGGGATAAATATGTCGGAACGGTGTGGATGAAAAA CATGTGACATGGCCGAGGGCCACAGCGGTGCTCTGGATAGATGTCAATTG GTTTTCTTCTTTTCGATCGCTCCGCGATAGATATCTCTGTACAAAGTGTT CTGGGCAAAATGCGGTCAAGACCGGGTAGAGAAAGAATACCTTGCTTGTC GGGATAGTCTTGCGCCGGAGATGGGGGCACGAGAAGAGGACAGGGCAGGG TCGGTTTGTACACGGAACAAGAGCAACCACACCAACGATATCGACACGAA CAACTTGTACCAGTAGTGATCAACCCTGCTGGTCTTCCAGGAACACGGAA CCCACAAGCAGCCACAACGAACACCGGTGGGTGCGAGAGGTGAAGGCCGA GTGAGCAACTCATTTCTGGGACAACCCATCTGCGTGTCTGAAACGGTTCT GTCGAGACGCTCCCATTCACACAGGATTTCCTTACACACTCCCCGCCCCC TGCTTTTCTGCGCATTCATCAGAGGGTACAACCCGGACACCAACAAAAGC GGCGACATCATCTACGCCAACAACCCTATCCTCGACAAGGGGGACGGGGT GGGAGTTCAGTATTTCTGGGAGGCGTTTCCGGCGGGGTCCGGGCCAGGGG ACAGGTAACGGAAGGAAGAATGTCGAAGAGTGGCACAGAACGCCCTGCAC AACTCTCCGCTTAAAGAATGTACTTGAGGCTTCGACACAGAACGCTGCAC AGCTCTCCGCCGAAAAGGACGTTAGGCTTGAGTTTCAACGAGAGTTCCAG GGACTGCAGCAAGAAACAACGGCGAGCCTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11013:845..6325-

>mRNA_Ecto-sp8_S_contig11013.1385.1 ID=mRNA_Ecto-sp8_S_contig11013.1385.1|Name=mRNA_Ecto-sp8_S_contig11013.1385.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=951bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11013:845..6325- (Ectocarpus species8 EcLAC_412)
AAGGGGCTTCTCCGTGCGGACGCGGGGTGGACAGCACTAAGGAACATGAA
AACGGGAGACGATGCCGGACCAGCCCCCACCTACGTCACAGAGAGCGACA
CGCCGCTCGGTGCGGAAAACCCGCCTGCGTTCGACGTGGTCGTGTGCGGT
GGAACCCTTGGCATCTTCGTTGGGACGGCTCTGCAGATGAGGGGCTTCCG
GGTGGGCGTTGTGGAGAGGGGCCCGCTGTTGGGCAGAGAGCAGGAGTGGA
ACATCAGCGAGGCCGAGCTGGAGGAGATGGTGGAGGCCGAGGTTTTGAGC
AAAGAGGACGCAGAGGAATGCGTTAGCATACGCTTCAACCCTTTGCGGGC
GGGGTTCAAGAGGGCGGAGGGTGATCCTGATGCCGTGGACACGTTCTGTC
CGGACGTACTCAACACGGGGGTGAAGCCGTCTCTCTTGGTGGACCGAGCA
CGTCGGCGTTTCGAGGCCAAGGGAGGGGTCGTCATGGAGTTCACTTCCAT
CGACGGCGTAAGCGTAAGGCCAGACGGGGTCGCTCTTTCAACGTCCCCGT
CTTCGCCACCGGGGAGGAAACCTCCCGCGTCTGGGGCTGGTACTGGAGAG
GAGGTGACCTCGCGGCTGGTACTCGACTGCATGGGGAACGCCTCGCCGAT
GGTGCGGCAGATCCGATGGGGCAAGAAACCGGAGGGGGTCTGCCTCGTCG
TCGGCTCGTGCGCTAGAGGGTACAACCCGGACACCAACAAAAGCGGCGAC
ATCATCTACGCCAACAACCCTATCCTCGACAAGGGGGACGGGGTGGGAGT
TCAGTATTTCTGGGAGGCGTTTCCGGCGGGGTCCGGGCCAGGGGACAGGC
TTCGACACAGAACGCTGCACAGCTCTCCGCCGAAAAGGACGTTAGGCTTG
AGTTTCAACGAGAGTTCCAGGGACTGCAGCAAGAAACAACGGCGAGCCTG
A
back to top