mRNA_Ecto-sp8_S_contig11.1366.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE) HSP 1 Score: 682 bits (1760), Expect = 7.420e-224 Identity = 343/423 (81.09%), Postives = 361/423 (85.34%), Query Frame = 1
Query: 1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHF-----------------------------GKEPGQHKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIEAALRRRVKERGADVPVNAWPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKFFRDGRYCFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
MDPG+VPVELQGLTQTEEMLIARCCPI+ VLHL GGQLGYGGH G+EPGQHKDLHVR+ARVQRAL WLIANN +YRD+VLD+TALSQ+ +DGQ RGLRTTVSG DSERDLGPRGEGGGEE GDTPEDTESFMAPA +SMLED AIEAALRR+V+E GADVPVNAWPGME TALNEFK TG ASMAFPALFP G DPTDPA +RSVKPTDG+RHLLKFFRDGRY FASHPRFPHWCQN MLERHRMLS+AQVYLKQNPGDAAMTIEHM H FR GS LAQQLTQRMCRYG NIT SRPYWYAKQQ+LQAIFATKGCATLFFTLSAADTHWDGL DLMPPGY+DSPAG+RRA IENPHIADTYFGNRAD FTSAFFGGVLQAQSLWYR EYQ R
Sbjct: 152 MDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQLRGLRTTVSGGDSERDLGPRGEGGGEEDGDTPEDTESFMAPAGKSMLEDRAIEAALRRQVRESGADVPVNAWPGMEATALNEFKTTGLASMAFPALFPWGKGDPTDPARSRSVKPTDGMRHLLKFFRDGRYRFASHPRFPHWCQN--MLERHRMLSQAQVYLKQNPGDAAMTIEHMRHLFRSGSPLAQQLTQRMCRYGANITGSRPYWYAKQQELQAIFATKGCATLFFTLSAADTHWDGLFDLMPPGYQDSPAGKRRALIENPHIADTYFGNRADAFTSAFFGGVLQAQSLWYRLEYQGR 572
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A6H5KC83_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC83_9PHAE) HSP 1 Score: 258 bits (660), Expect = 4.740e-79 Identity = 161/334 (48.20%), Postives = 175/334 (52.40%), Query Frame = 1
Query: 1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQHKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIEAALRRRVKERGADVPVNAWPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKFFRDGRYCFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGL 1002
MDPG+ PVELQGLTQTEEMLIA+CCPI+ VLHL GGQLGYGGH + N A +D+ S +A A + D I +RR +E G PV G+RHLLK+FRDGRY FASHPRFPHWCQN MLERHRMLS+AQVYLKQNPGDAAMTIEHM FR GS LAQQLTQRMCRYG NIT SRPYWYAKQQ+LQAIFATKGCATLFFTLSAADTHWDGL
Sbjct: 1 MDPGSEPVELQGLTQTEEMLIAQCCPIMRVLHLKGGQLGYGGH-------------------------VVNVA----------------------------------QDI-------------------STLAAALPRLAADVPI-IIIRREGQEPGQHKPV------------------------------------------------GMRHLLKYFRDGRYRFASHPRFPHWCQN--MLERHRMLSQAQVYLKQNPGDAAMTIEHMRILFRSGSPLAQQLTQRMCRYGANITGSRPYWYAKQQELQAIFATKGCATLFFTLSAADTHWDGL 205
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A6S7GE38_PARCT (Helitron_like_N domain-containing protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GE38_PARCT) HSP 1 Score: 256 bits (654), Expect = 9.460e-73 Identity = 163/435 (37.47%), Postives = 224/435 (51.49%), Query Frame = 1
Query: 1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQ----------------------------HKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKF---FRDGRY--CFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
MDPG VP +L+GLTQ EEMLI+R CPI+ V +GGQ GY GH P H+D VR+ +V A+LWL NN ++++ +D + + +G P LR + E +L E G Q + S A +E +L + +R+R ++ GA + VN WP E +NEFK G A+MAFP LFP G DPT+ A + T+ +HL+KF DG++ FASHPRFP+W N M +RH++LS+A VYL+Q+P DA MT+E + S A Q+ R+ RY + + YWY + Q+L A+ KGC T FFT SAAD HW L L+ S + R +A I+NPH+ D +F R F + GVL A+ WYR EYQ R
Sbjct: 167 MDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID----ENELSVHVENEGPPQ----DPVMSANASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNLINEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAERLADGKFEWRFASHPRFPYWALN--MKQRHQLLSQANVYLRQHPADANMTMEELKQMV--NSMSANQMVNRLQRYVSKVQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADMHWPDLQRLLQNDEGASRSERAQAVIDNPHLTDWFFMQRLQEFVRHWLNGVLDAEWHWYRFEYQAR 589
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A7D9LY68_PARCT (Helitron_like_N domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LY68_PARCT) HSP 1 Score: 254 bits (649), Expect = 6.610e-72 Identity = 163/436 (37.39%), Postives = 225/436 (51.61%), Query Frame = 1
Query: 1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQ----------------------------HKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPED-TESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKF---FRDGRY--CFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
MDPG VP +L+GLTQ EEMLI+R CPI+ V +GGQ GY GH P H D VR+ +V A+LWL NN ++++ +D + + +G P LR + ++E + EG P+D S A +E +L + +R+R ++ GA + VN WP E +NEFK G A+MAFP LFP G DPT+ A + T+ +HL+KF DG++ FASHPRFP+W N M +RH++LS+A VYL+Q+P DA MT+E + S A Q+ R+ RY + + YWY + Q+L A+ KGC T FFT SAAD HW L L+ S + R +A I+NPH+ D +F R F + GVL A+ WYR EYQ R
Sbjct: 182 MDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHLDFTVRRHKVFEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID--ENEHSVHVENEG-------PPQDPVMSANASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNRVNEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAEKLADGKFEWRFASHPRFPYWALN--MKQRHQLLSQANVYLRQHPADANMTMEELKQMV--NSMSANQMVNRLQRYVSKVQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADMHWSDLQRLLQNDEGASRSERAQAVIDNPHLTDWFFMQRLQEFVRHWLNGVLDAEWHWYRFEYQAR 604
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE) HSP 1 Score: 248 bits (633), Expect = 2.730e-70 Identity = 129/181 (71.27%), Postives = 141/181 (77.90%), Query Frame = 1
Query: 1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHF-----------------------------GKEPGQHKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIEAALRRR 456
MDPG+VPVELQGLTQTEEMLIARCCPI+ VLHL GGQLGYGGH G+EPGQHKDLHVR+ARVQRAL WLIANN +YRD+VLD+TA+SQ+ +DGQ RGLRTTVSG DSERDLGPRGEGGGEE GDTPEDTESFMAPA +SMLED AIEAALRR+
Sbjct: 45 MDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTAISQLPVDGQLRGLRTTVSGGDSERDLGPRGEGGGEEDGDTPEDTESFMAPAGKSMLEDRAIEAALRRQ 225
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A6S7I194_PARCT (ATP-dependent DNA helicase n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7I194_PARCT) HSP 1 Score: 256 bits (655), Expect = 1.470e-69 Identity = 163/435 (37.47%), Postives = 225/435 (51.72%), Query Frame = 1
Query: 1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQ----------------------------HKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKF---FRDGRY--CFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
MDPG VP +L+GLTQ EEMLI+R CPI+ V +GGQ GY GH P H+D VR+ +V A+LWL NN ++++ +D + + +G P LR + E +L E G Q + S A +E +L + + +R+R ++ GA + VN WP E +NEFK G A+MAFP LFP G DPT+ A + T+ +HL+KF DG++ FASHPRFP+W N M +RH++LS+A VYL+Q+P DA MT+E + S A Q+ R+ RY + + YWY + Q+L A+ KGC T FFT SAAD HW L L+ S + R +A I+NPH+ D +F R F + GVL A+ WYR EYQ R
Sbjct: 321 MDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID----ENELSVHVENEGPPQ----DPVMSANASVEELVLGNGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNLINEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAERLADGKFEWRFASHPRFPYWALN--MKQRHQLLSQANVYLRQHPADANMTMEELKQMV--NSMSANQMVNRLQRYVSKVQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADMHWPDLQRLLQNDEGASRSERAQAVIDNPHLTDWFFMQRLQEFVRHWLNGVLDAEWHWYRFEYQAR 743
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: UPI00106CBCF8 (uncharacterized protein LOC114518711 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CBCF8) HSP 1 Score: 249 bits (637), Expect = 1.870e-69 Identity = 161/428 (37.62%), Postives = 223/428 (52.10%), Query Frame = 1
Query: 1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGH-----------FGKEPGQ-----------------HKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKFFR---DGRY--CFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWY 1161
MDPG VP +L+GLTQ EEMLI+R CPI+ V +GGQ GY GH + P Q HKD VR+ RV A+LWL NN ++D+ +D + + +G P+ LR + D+E + E +G E S A +E +L + + +R+R ++ GA + VN WP E A+NEFK G ASMAFP LFP G DPT+ V + +HL+KF +G++ FASHPRFP+W N M +RH++LS+A +YL+Q+P DA MT+E + S A Q+ R+ RY I + YWY + Q+L A+ KGC T FFT SAAD+HW L L+ S R +A I+NPH+ D +F R F + GVL A+ W+
Sbjct: 341 MDPGIVPEQLRGLTQVEEMLISRVCPIMQVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPAQVADLPVMIVRRQGADETHKDFTVRRHRVLEAILWLKTNNPFFKDIEIDRDVIQSLPENGIPKELRYVID--DNELSVHV------ENEGPPQEPVMSANATVEELVLGNGSTSFIPMRQRQRKDGAAIQDAVNEVDPLDWPSTEGNAVNEFKTDGLASMAFPTLFPYGRSDPTNRVRQHEVSLAEAFKHLMKFAERLPNGKFEWRFASHPRFPYWALN--MKQRHQLLSQANIYLRQHPADANMTMEELKTMV--NSMSANQMVNRLQRYVSKIQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADSHWPDLQRLLQSNEGASRTERAQAVIDNPHLTDWFFMQRLQEFIKHWLQGVLDAE--WF 754
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A7D9EWD8_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EWD8_PARCT) HSP 1 Score: 254 bits (649), Expect = 5.300e-69 Identity = 163/436 (37.39%), Postives = 225/436 (51.61%), Query Frame = 1
Query: 1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQ----------------------------HKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPED-TESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKF---FRDGRY--CFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
MDPG VP +L+GLTQ EEMLI+R CPI+ V +GGQ GY GH P H D VR+ +V A+LWL NN ++++ +D + + +G P LR + ++E + EG P+D S A +E +L + +R+R ++ GA + VN WP E +NEFK G A+MAFP LFP G DPT+ A + T+ +HL+KF DG++ FASHPRFP+W N M +RH++LS+A VYL+Q+P DA MT+E + S A Q+ R+ RY + + YWY + Q+L A+ KGC T FFT SAAD HW L L+ S + R +A I+NPH+ D +F R F + GVL A+ WYR EYQ R
Sbjct: 169 MDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHLDFTVRRHKVFEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID--ENEHSVHVENEG-------PPQDPVMSANASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNRVNEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAEKLADGKFEWRFASHPRFPYWALN--MKQRHQLLSQANVYLRQHPADANMTMEELKQMV--NSMSANQMVNRLQRYVSKVQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADMHWSDLQRLLQNDEGASRSERAQAVIDNPHLTDWFFMQRLQEFVRHWLNGVLDAEWHWYRFEYQAR 591
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A6S7G7B4_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7G7B4_PARCT) HSP 1 Score: 251 bits (640), Expect = 1.040e-67 Identity = 161/435 (37.01%), Postives = 225/435 (51.72%), Query Frame = 1
Query: 1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGH-------------------------FGKEPG---QHKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKF---FRDGR--YCFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
MDPG VP +L+GLTQ EEMLI+R CPI+ V +GGQ GY GH G+ G +H+D VR+ +V A+LWL NN ++++ +D + + +G P LR + E +L E G Q + S A +E +L + +R+R ++ GA + VN WP E +NE K G A+MAFP LFP G DPT+ A + T+ +HL+KF DG+ + FASHPRFP+W N ++RH++LS+A VYL+Q+P DA MT+E + H S A Q+ R+ RY + + YWY Q+L A+ KGC T FFT SAAD HW L L+ + + R +A I+NPH+ D +F F + GVL A+ WYR EYQ R
Sbjct: 113 MDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVSIGRRHGAEDKHRDFTVRQHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID----ENELSVHVENEGPPQ----DPVMSANASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNLINELKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAERLADGKCEWRFASHPRFPYWALN---MKRHQLLSQANVYLRQHPADANMTMEELKHMV--NSMSANQMVNRLQRYVSKVQGTNQYWYQWLQELLALIEQKGCPTFFFTFSAADMHWPDLQRLLQNDEGANRSERAQAVIDNPHLTDWFFMQWLQEFVRHWLNGVLDAEWHWYRFEYQAR 534
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A7D9IBF1_PARCT (Helitron_like_N domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IBF1_PARCT) HSP 1 Score: 249 bits (637), Expect = 1.070e-67 Identity = 161/435 (37.01%), Postives = 222/435 (51.03%), Query Frame = 1
Query: 1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQ----------------------------HKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKF---FRDGRY--CFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
MDPG VP +L+GLTQ EEMLI+R CPI+ V +GGQ GY GH P H+D VR+ + A+L L NN ++++ +D + + +G P LR + E +L E G Q + S A +E +L + +R+R ++ GA + VN WP E +NEFK G A+MAFP LFP G DPT+ A + T+ +HL+KF DG++ FASHPRFP+W N M +RH++LS+A VYL+Q+P DA MT+E + S A Q+ R+ RY + + YWY + Q+L A+ KGC T FFT SAAD HW L L+ S + R +A I+NPH+ D +F R F + GVL A+ WYR EYQ R
Sbjct: 169 MDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKALEAVLCLKTNNPFFKNIEIDRDGIQSLPENGIPDELRYVID----ENELSVHVENEGPPQ----DPVMSANASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNLINEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAESLADGKFEWRFASHPRFPYWALN--MKQRHQLLSQANVYLRQHPADANMTMEELKQMV--NSMSANQMVNRLQRYVSKVQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADMHWPDLQRLLQNDEGASRSERAQAVIDNPHLTDWFFMQRLQEFVRHWLNGVLDAEWHWYRFEYQAR 591 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11.1366.1 >prot_Ecto-sp8_S_contig11.1366.1 ID=prot_Ecto-sp8_S_contig11.1366.1|Name=mRNA_Ecto-sp8_S_contig11.1366.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=396bp MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQback to top mRNA from alignment at Ecto-sp8_S_contig11:12095..14154- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11.1366.1 ID=mRNA_Ecto-sp8_S_contig11.1366.1|Name=mRNA_Ecto-sp8_S_contig11.1366.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2060bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11:12095..14154- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11:12095..14154- >mRNA_Ecto-sp8_S_contig11.1366.1 ID=mRNA_Ecto-sp8_S_contig11.1366.1|Name=mRNA_Ecto-sp8_S_contig11.1366.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1188bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11:12095..14154- (Ectocarpus species8 EcLAC_412)back to top |