mRNA_Ecto-sp8_S_contig11.1366.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig11.1366.1
Unique NamemRNA_Ecto-sp8_S_contig11.1366.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 682 bits (1760), Expect = 7.420e-224
Identity = 343/423 (81.09%), Postives = 361/423 (85.34%), Query Frame = 1
Query:    1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHF-----------------------------GKEPGQHKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIEAALRRRVKERGADVPVNAWPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKFFRDGRYCFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
            MDPG+VPVELQGLTQTEEMLIARCCPI+ VLHL GGQLGYGGH                              G+EPGQHKDLHVR+ARVQRAL WLIANN +YRD+VLD+TALSQ+ +DGQ RGLRTTVSG DSERDLGPRGEGGGEE GDTPEDTESFMAPA +SMLED AIEAALRR+V+E GADVPVNAWPGME TALNEFK TG ASMAFPALFP G  DPTDPA +RSVKPTDG+RHLLKFFRDGRY FASHPRFPHWCQN  MLERHRMLS+AQVYLKQNPGDAAMTIEHM H FR GS LAQQLTQRMCRYG NIT SRPYWYAKQQ+LQAIFATKGCATLFFTLSAADTHWDGL DLMPPGY+DSPAG+RRA IENPHIADTYFGNRAD FTSAFFGGVLQAQSLWYR EYQ R
Sbjct:  152 MDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQLRGLRTTVSGGDSERDLGPRGEGGGEEDGDTPEDTESFMAPAGKSMLEDRAIEAALRRQVRESGADVPVNAWPGMEATALNEFKTTGLASMAFPALFPWGKGDPTDPARSRSVKPTDGMRHLLKFFRDGRYRFASHPRFPHWCQN--MLERHRMLSQAQVYLKQNPGDAAMTIEHMRHLFRSGSPLAQQLTQRMCRYGANITGSRPYWYAKQQELQAIFATKGCATLFFTLSAADTHWDGLFDLMPPGYQDSPAGKRRALIENPHIADTYFGNRADAFTSAFFGGVLQAQSLWYRLEYQGR 572          
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A6H5KC83_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC83_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 4.740e-79
Identity = 161/334 (48.20%), Postives = 175/334 (52.40%), Query Frame = 1
Query:    1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQHKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIEAALRRRVKERGADVPVNAWPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKFFRDGRYCFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGL 1002
            MDPG+ PVELQGLTQTEEMLIA+CCPI+ VLHL GGQLGYGGH                         + N A                                  +D+                   S +A A   +  D  I   +RR  +E G   PV                                                G+RHLLK+FRDGRY FASHPRFPHWCQN  MLERHRMLS+AQVYLKQNPGDAAMTIEHM   FR GS LAQQLTQRMCRYG NIT SRPYWYAKQQ+LQAIFATKGCATLFFTLSAADTHWDGL
Sbjct:    1 MDPGSEPVELQGLTQTEEMLIAQCCPIMRVLHLKGGQLGYGGH-------------------------VVNVA----------------------------------QDI-------------------STLAAALPRLAADVPI-IIIRREGQEPGQHKPV------------------------------------------------GMRHLLKYFRDGRYRFASHPRFPHWCQN--MLERHRMLSQAQVYLKQNPGDAAMTIEHMRILFRSGSPLAQQLTQRMCRYGANITGSRPYWYAKQQELQAIFATKGCATLFFTLSAADTHWDGL 205          
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A6S7GE38_PARCT (Helitron_like_N domain-containing protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GE38_PARCT)

HSP 1 Score: 256 bits (654), Expect = 9.460e-73
Identity = 163/435 (37.47%), Postives = 224/435 (51.49%), Query Frame = 1
Query:    1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQ----------------------------HKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKF---FRDGRY--CFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
            MDPG VP +L+GLTQ EEMLI+R CPI+ V   +GGQ GY GH    P                              H+D  VR+ +V  A+LWL  NN  ++++ +D   +  +  +G P  LR  +     E +L    E  G  Q    +   S  A  +E +L   +     +R+R ++ GA +   VN      WP  E   +NEFK  G A+MAFP LFP G  DPT+ A    +  T+  +HL+KF     DG++   FASHPRFP+W  N  M +RH++LS+A VYL+Q+P DA MT+E +       S  A Q+  R+ RY   +  +  YWY + Q+L A+   KGC T FFT SAAD HW  L  L+      S + R +A I+NPH+ D +F  R   F   +  GVL A+  WYR EYQ R
Sbjct:  167 MDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID----ENELSVHVENEGPPQ----DPVMSANASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNLINEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAERLADGKFEWRFASHPRFPYWALN--MKQRHQLLSQANVYLRQHPADANMTMEELKQMV--NSMSANQMVNRLQRYVSKVQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADMHWPDLQRLLQNDEGASRSERAQAVIDNPHLTDWFFMQRLQEFVRHWLNGVLDAEWHWYRFEYQAR 589          
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A7D9LY68_PARCT (Helitron_like_N domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LY68_PARCT)

HSP 1 Score: 254 bits (649), Expect = 6.610e-72
Identity = 163/436 (37.39%), Postives = 225/436 (51.61%), Query Frame = 1
Query:    1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQ----------------------------HKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPED-TESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKF---FRDGRY--CFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
            MDPG VP +L+GLTQ EEMLI+R CPI+ V   +GGQ GY GH    P                              H D  VR+ +V  A+LWL  NN  ++++ +D   +  +  +G P  LR  +   ++E  +    EG        P+D   S  A  +E +L   +     +R+R ++ GA +   VN      WP  E   +NEFK  G A+MAFP LFP G  DPT+ A    +  T+  +HL+KF     DG++   FASHPRFP+W  N  M +RH++LS+A VYL+Q+P DA MT+E +       S  A Q+  R+ RY   +  +  YWY + Q+L A+   KGC T FFT SAAD HW  L  L+      S + R +A I+NPH+ D +F  R   F   +  GVL A+  WYR EYQ R
Sbjct:  182 MDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHLDFTVRRHKVFEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID--ENEHSVHVENEG-------PPQDPVMSANASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNRVNEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAEKLADGKFEWRFASHPRFPYWALN--MKQRHQLLSQANVYLRQHPADANMTMEELKQMV--NSMSANQMVNRLQRYVSKVQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADMHWSDLQRLLQNDEGASRSERAQAVIDNPHLTDWFFMQRLQEFVRHWLNGVLDAEWHWYRFEYQAR 604          
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 2.730e-70
Identity = 129/181 (71.27%), Postives = 141/181 (77.90%), Query Frame = 1
Query:    1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHF-----------------------------GKEPGQHKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIEAALRRR 456
            MDPG+VPVELQGLTQTEEMLIARCCPI+ VLHL GGQLGYGGH                              G+EPGQHKDLHVR+ARVQRAL WLIANN +YRD+VLD+TA+SQ+ +DGQ RGLRTTVSG DSERDLGPRGEGGGEE GDTPEDTESFMAPA +SMLED AIEAALRR+
Sbjct:   45 MDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTAISQLPVDGQLRGLRTTVSGGDSERDLGPRGEGGGEEDGDTPEDTESFMAPAGKSMLEDRAIEAALRRQ 225          
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A6S7I194_PARCT (ATP-dependent DNA helicase n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7I194_PARCT)

HSP 1 Score: 256 bits (655), Expect = 1.470e-69
Identity = 163/435 (37.47%), Postives = 225/435 (51.72%), Query Frame = 1
Query:    1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQ----------------------------HKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKF---FRDGRY--CFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
            MDPG VP +L+GLTQ EEMLI+R CPI+ V   +GGQ GY GH    P                              H+D  VR+ +V  A+LWL  NN  ++++ +D   +  +  +G P  LR  +     E +L    E  G  Q    +   S  A  +E +L + +     +R+R ++ GA +   VN      WP  E   +NEFK  G A+MAFP LFP G  DPT+ A    +  T+  +HL+KF     DG++   FASHPRFP+W  N  M +RH++LS+A VYL+Q+P DA MT+E +       S  A Q+  R+ RY   +  +  YWY + Q+L A+   KGC T FFT SAAD HW  L  L+      S + R +A I+NPH+ D +F  R   F   +  GVL A+  WYR EYQ R
Sbjct:  321 MDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID----ENELSVHVENEGPPQ----DPVMSANASVEELVLGNGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNLINEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAERLADGKFEWRFASHPRFPYWALN--MKQRHQLLSQANVYLRQHPADANMTMEELKQMV--NSMSANQMVNRLQRYVSKVQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADMHWPDLQRLLQNDEGASRSERAQAVIDNPHLTDWFFMQRLQEFVRHWLNGVLDAEWHWYRFEYQAR 743          
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: UPI00106CBCF8 (uncharacterized protein LOC114518711 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CBCF8)

HSP 1 Score: 249 bits (637), Expect = 1.870e-69
Identity = 161/428 (37.62%), Postives = 223/428 (52.10%), Query Frame = 1
Query:    1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGH-----------FGKEPGQ-----------------HKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKFFR---DGRY--CFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWY 1161
            MDPG VP +L+GLTQ EEMLI+R CPI+ V   +GGQ GY GH             + P Q                 HKD  VR+ RV  A+LWL  NN  ++D+ +D   +  +  +G P+ LR  +   D+E  +        E +G   E   S  A  +E +L + +     +R+R ++ GA +   VN      WP  E  A+NEFK  G ASMAFP LFP G  DPT+      V   +  +HL+KF     +G++   FASHPRFP+W  N  M +RH++LS+A +YL+Q+P DA MT+E +       S  A Q+  R+ RY   I  +  YWY + Q+L A+   KGC T FFT SAAD+HW  L  L+      S   R +A I+NPH+ D +F  R   F   +  GVL A+  W+
Sbjct:  341 MDPGIVPEQLRGLTQVEEMLISRVCPIMQVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPAQVADLPVMIVRRQGADETHKDFTVRRHRVLEAILWLKTNNPFFKDIEIDRDVIQSLPENGIPKELRYVID--DNELSVHV------ENEGPPQEPVMSANATVEELVLGNGSTSFIPMRQRQRKDGAAIQDAVNEVDPLDWPSTEGNAVNEFKTDGLASMAFPTLFPYGRSDPTNRVRQHEVSLAEAFKHLMKFAERLPNGKFEWRFASHPRFPYWALN--MKQRHQLLSQANIYLRQHPADANMTMEELKTMV--NSMSANQMVNRLQRYVSKIQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADSHWPDLQRLLQSNEGASRTERAQAVIDNPHLTDWFFMQRLQEFIKHWLQGVLDAE--WF 754          
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A7D9EWD8_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EWD8_PARCT)

HSP 1 Score: 254 bits (649), Expect = 5.300e-69
Identity = 163/436 (37.39%), Postives = 225/436 (51.61%), Query Frame = 1
Query:    1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQ----------------------------HKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPED-TESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKF---FRDGRY--CFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
            MDPG VP +L+GLTQ EEMLI+R CPI+ V   +GGQ GY GH    P                              H D  VR+ +V  A+LWL  NN  ++++ +D   +  +  +G P  LR  +   ++E  +    EG        P+D   S  A  +E +L   +     +R+R ++ GA +   VN      WP  E   +NEFK  G A+MAFP LFP G  DPT+ A    +  T+  +HL+KF     DG++   FASHPRFP+W  N  M +RH++LS+A VYL+Q+P DA MT+E +       S  A Q+  R+ RY   +  +  YWY + Q+L A+   KGC T FFT SAAD HW  L  L+      S + R +A I+NPH+ D +F  R   F   +  GVL A+  WYR EYQ R
Sbjct:  169 MDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHLDFTVRRHKVFEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID--ENEHSVHVENEG-------PPQDPVMSANASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNRVNEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAEKLADGKFEWRFASHPRFPYWALN--MKQRHQLLSQANVYLRQHPADANMTMEELKQMV--NSMSANQMVNRLQRYVSKVQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADMHWSDLQRLLQNDEGASRSERAQAVIDNPHLTDWFFMQRLQEFVRHWLNGVLDAEWHWYRFEYQAR 591          
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A6S7G7B4_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7G7B4_PARCT)

HSP 1 Score: 251 bits (640), Expect = 1.040e-67
Identity = 161/435 (37.01%), Postives = 225/435 (51.72%), Query Frame = 1
Query:    1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGH-------------------------FGKEPG---QHKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKF---FRDGR--YCFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
            MDPG VP +L+GLTQ EEMLI+R CPI+ V   +GGQ GY GH                          G+  G   +H+D  VR+ +V  A+LWL  NN  ++++ +D   +  +  +G P  LR  +     E +L    E  G  Q    +   S  A  +E +L   +     +R+R ++ GA +   VN      WP  E   +NE K  G A+MAFP LFP G  DPT+ A    +  T+  +HL+KF     DG+  + FASHPRFP+W  N   ++RH++LS+A VYL+Q+P DA MT+E + H     S  A Q+  R+ RY   +  +  YWY   Q+L A+   KGC T FFT SAAD HW  L  L+      + + R +A I+NPH+ D +F      F   +  GVL A+  WYR EYQ R
Sbjct:  113 MDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVSIGRRHGAEDKHRDFTVRQHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID----ENELSVHVENEGPPQ----DPVMSANASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNLINELKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAERLADGKCEWRFASHPRFPYWALN---MKRHQLLSQANVYLRQHPADANMTMEELKHMV--NSMSANQMVNRLQRYVSKVQGTNQYWYQWLQELLALIEQKGCPTFFFTFSAADMHWPDLQRLLQNDEGANRSERAQAVIDNPHLTDWFFMQWLQEFVRHWLNGVLDAEWHWYRFEYQAR 534          
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Match: A0A7D9IBF1_PARCT (Helitron_like_N domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IBF1_PARCT)

HSP 1 Score: 249 bits (637), Expect = 1.070e-67
Identity = 161/435 (37.01%), Postives = 222/435 (51.03%), Query Frame = 1
Query:    1 MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQ----------------------------HKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTTVSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIE-AALRRRVKERGADVP--VNA-----WPGMEETALNEFKITGRASMAFPALFPTGTVDPTDPALARSVKPTDGIRHLLKF---FRDGRY--CFASHPRFPHWCQNHNMLERHRMLSKAQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPYWYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRRRAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQER 1182
            MDPG VP +L+GLTQ EEMLI+R CPI+ V   +GGQ GY GH    P                              H+D  VR+ +   A+L L  NN  ++++ +D   +  +  +G P  LR  +     E +L    E  G  Q    +   S  A  +E +L   +     +R+R ++ GA +   VN      WP  E   +NEFK  G A+MAFP LFP G  DPT+ A    +  T+  +HL+KF     DG++   FASHPRFP+W  N  M +RH++LS+A VYL+Q+P DA MT+E +       S  A Q+  R+ RY   +  +  YWY + Q+L A+   KGC T FFT SAAD HW  L  L+      S + R +A I+NPH+ D +F  R   F   +  GVL A+  WYR EYQ R
Sbjct:  169 MDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKALEAVLCLKTNNPFFKNIEIDRDGIQSLPENGIPDELRYVID----ENELSVHVENEGPPQ----DPVMSANASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNLINEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAESLADGKFEWRFASHPRFPYWALN--MKQRHQLLSQANVYLRQHPADANMTMEELKQMV--NSMSANQMVNRLQRYVSKVQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADMHWPDLQRLLQNDEGASRSERAQAVIDNPHLTDWFFMQRLQEFVRHWLNGVLDAEWHWYRFEYQAR 591          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11.1366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L976_9PHAE7.420e-22481.09ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ... [more]
A0A6H5KC83_9PHAE4.740e-7948.20Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6S7GE38_PARCT9.460e-7337.47Helitron_like_N domain-containing protein n=3 Tax=... [more]
A0A7D9LY68_PARCT6.610e-7237.39Helitron_like_N domain-containing protein (Fragmen... [more]
A0A6H5J8Y8_9PHAE2.730e-7071.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6S7I194_PARCT1.470e-6937.47ATP-dependent DNA helicase n=3 Tax=Paramuricea cla... [more]
UPI00106CBCF81.870e-6937.62uncharacterized protein LOC114518711 n=1 Tax=Dendr... [more]
A0A7D9EWD8_PARCT5.300e-6937.39ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]
A0A6S7G7B4_PARCT1.040e-6737.01ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]
A0A7D9IBF1_PARCT1.070e-6737.01Helitron_like_N domain-containing protein (Fragmen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11contigEcto-sp8_S_contig11:12095..14154 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeMetazoa
Stop1
Start1
Seed ortholog score209.9
Seed ortholog evalue2.1e-51
Seed eggNOG ortholog400682.PAC_15725762
Model size1925
Hectar predicted targeting categoryother localisation
Exons4
EggNOG OGs2CC8B@1,2S3BW@2759,3A3QP@33154,3C1YH@33208
Cds size1188
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143186.3091226-UTR-Ecto-sp8_S_contig11:12094..124711681143186.3091226-UTR-Ecto-sp8_S_contig11:12094..12471Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig11 12095..12471 -
1681143186.3193753-UTR-Ecto-sp8_S_contig11:12501..127571681143186.3193753-UTR-Ecto-sp8_S_contig11:12501..12757Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig11 12502..12757 -
1681143186.328031-UTR-Ecto-sp8_S_contig11:12774..128781681143186.328031-UTR-Ecto-sp8_S_contig11:12774..12878Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig11 12775..12878 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143186.3358738-CDS-Ecto-sp8_S_contig11:12878..139341681143186.3358738-CDS-Ecto-sp8_S_contig11:12878..13934Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11 12879..13934 -
1681143186.3525178-CDS-Ecto-sp8_S_contig11:14022..141541681143186.3525178-CDS-Ecto-sp8_S_contig11:14022..14154Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11 14023..14154 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11.1366.1prot_Ecto-sp8_S_contig11.1366.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig11 12879..14154 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig11.1366.1

>prot_Ecto-sp8_S_contig11.1366.1 ID=prot_Ecto-sp8_S_contig11.1366.1|Name=mRNA_Ecto-sp8_S_contig11.1366.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=396bp
MDPGNVPVELQGLTQTEEMLIARCCPIVHVLHLNGGQLGYGGHFGKEPGQ
HKDLHVRKARVQRALLWLIANNAHYRDLVLDDTALSQILLDGQPRGLRTT
VSGADSERDLGPRGEGGGEEQGDTPEDTESFMAPADESMLEDSAIEAALR
RRVKERGADVPVNAWPGMEETALNEFKITGRASMAFPALFPTGTVDPTDP
ALARSVKPTDGIRHLLKFFRDGRYCFASHPRFPHWCQNHNMLERHRMLSK
AQVYLKQNPGDAAMTIEHMNHRFRPGSSLAQQLTQRMCRYGRNITRSRPY
WYAKQQKLQAIFATKGCATLFFTLSAADTHWDGLVDLMPPGYEDSPAGRR
RAPIENPHIADTYFGNRADGFTSAFFGGVLQAQSLWYRREYQERV*
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mRNA from alignment at Ecto-sp8_S_contig11:12095..14154-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig11.1366.1 ID=mRNA_Ecto-sp8_S_contig11.1366.1|Name=mRNA_Ecto-sp8_S_contig11.1366.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2060bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11:12095..14154- (Ectocarpus species8 EcLAC_412)
ATGGATCCTGGGAACGTACCCGTCGAGCTCCAAGGTCTGACCCAGACGGA GGAGATGCTCATCGCGCGGTGCTGTCCGATCGTGCACGTTCTCCACCTCA ACGGGGGACAGCTAGGGTACGGTGGCCATTTCGTCAAACGTCGCTCAGGA CATCACCATCTTCGCCACTATCCTCCGCAGGTTAGCCGCCGATGTGCCGA TCATCATCATTCGTAGAGAGGGGAAGGAACCCGGCCAGCATAAGGACCTA CACGTGCGGAAGGCTCGCGTGCAACGGGCTTTGCTATGGCTCATTGCCAA CAACGCGCACTACCGCGACCTTGTCCTTGACGACACAGCTCTGTCTCAGA TCCTCCTTGACGGGCAACCACGTGGACTGCGAACCACCGTCAGCGGGGCA GACTCGGAGCGTGATCTTGGCCCTCGGGGGGAGGGGGGGGGGGAGGAGCA GGGTGACACCCCCGAGGACACGGAGTCCTTCATGGCGCCGGCAGACGAGA GCATGCTCGAGGACAGCGCCATCGAAGCGGCACTGCGGAGGCGGGTGAAG GAACGCGGGGCGGACGTTCCGGTCAACGCCTGGCCTGGGATGGAGGAGAC CGCCCTGAACGAGTTCAAGATAACAGGGCGTGCGTCCATGGCCTTCCCCG CCCTCTTCCCCACGGGGACGGTGGACCCCACCGACCCTGCACTCGCCAGG AGCGTCAAACCCACCGACGGCATAAGGCACCTCCTCAAGTTCTTCCGCGA CGGTCGCTACTGCTTTGCATCCCACCCCCGGTTTCCTCACTGGTGCCAGA ACCACAACATGCTCGAACGCCACAGGATGCTCAGCAAGGCGCAGGTCTAC CTCAAGCAAAATCCAGGGGACGCCGCCATGACGATAGAGCACATGAATCA TCGGTTCCGGCCGGGTTCGTCGCTGGCGCAGCAGCTCACACAGCGCATGT GCCGGTACGGCCGCAACATCACCAGGTCTAGGCCGTACTGGTACGCCAAG CAGCAGAAGCTCCAGGCGATTTTTGCCACCAAGGGCTGCGCCACTCTCTT CTTCACGCTCTCTGCCGCCGACACGCACTGGGACGGCCTGGTCGACCTCA TGCCGCCAGGCTACGAGGACTCCCCAGCAGGCCGACGAAGGGCGCCCATT GAAAACCCGCACATCGCCGATACCTACTTCGGCAACAGGGCGGACGGTTT CACCTCCGCCTTCTTCGGCGGTGTACTCCAAGCCCAGTCGCTGTGGTACA GGCGTGAGTACCAGGAGAGGGTGTAGCGCGAACGCGCACGGATGTGCCTG GCTCCAAGACATTCCCGGCATCGTCGACCTCGTCTGCAGAGCTTACGCGG AGAGGAAGGCGGCTGAACGGCGAGCCGCGGGTCTGGCCGCCGGACAGGGG GGTTCGGCGACGACGAAGAACGCGAGGCTCTGGAGCGAGCCGTCGCCGAC CGCCAGGCAGCGGACTACGACGTTTGCAGATACGCCGACTGGCTCATCAG TACCGTCAACACTCGGCTTCCCGAGGAACGCGCCGCCCATCCGGGGGGAG CGCCAGACCCGCACCCGTGCTCCGTGAACCTCTTCAAGATTGCGCCTGTC AGTGATGAGGCCGCAGGCCGCGCCGACATCGACGGCTTCATTAACTGCTG CCAGTGCCACCTCTGCCGTCCTGAAGGGTAGAGCAAGCGCGCTGGCCGGC AGGGGTGTCGCTTCGGCTGCCCTCACGAGTGTCAGCCCGAGACCTCCTTG CAGTTTGAGGAGATAGACAACGGCTCCGTGAGGGCCACCACCAAAACCAA GCGCAACGACGGCCACCTTAACAGCTACCGCCGCCTTGCTCTCTCTCTGG CGGGCGAACATCGACTTCCAACTCACATTGGACTGGGACCAAGCGGTGCG GTACATGGTCAAGTATGGGAGCAAAGGAGACAAGCGGTCGCCTGCCGCTG CCGACGTCGTCTCCCGGGCCATCATCCGCGCGGACGACGACGCCGACGAG GCGCTGACAGTCCTACGAAGCGTCTTCCTCACGTGTACCGGTGAGCGCGA CATTTCCGCC
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11:12095..14154-

>mRNA_Ecto-sp8_S_contig11.1366.1 ID=mRNA_Ecto-sp8_S_contig11.1366.1|Name=mRNA_Ecto-sp8_S_contig11.1366.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1188bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11:12095..14154- (Ectocarpus species8 EcLAC_412)
ATGGATCCTGGGAACGTACCCGTCGAGCTCCAAGGTCTGACCCAGACGGA
GGAGATGCTCATCGCGCGGTGCTGTCCGATCGTGCACGTTCTCCACCTCA
ACGGGGGACAGCTAGGGTACGGTGGCCATTTCGGGAAGGAACCCGGCCAG
CATAAGGACCTACACGTGCGGAAGGCTCGCGTGCAACGGGCTTTGCTATG
GCTCATTGCCAACAACGCGCACTACCGCGACCTTGTCCTTGACGACACAG
CTCTGTCTCAGATCCTCCTTGACGGGCAACCACGTGGACTGCGAACCACC
GTCAGCGGGGCAGACTCGGAGCGTGATCTTGGCCCTCGGGGGGAGGGGGG
GGGGGAGGAGCAGGGTGACACCCCCGAGGACACGGAGTCCTTCATGGCGC
CGGCAGACGAGAGCATGCTCGAGGACAGCGCCATCGAAGCGGCACTGCGG
AGGCGGGTGAAGGAACGCGGGGCGGACGTTCCGGTCAACGCCTGGCCTGG
GATGGAGGAGACCGCCCTGAACGAGTTCAAGATAACAGGGCGTGCGTCCA
TGGCCTTCCCCGCCCTCTTCCCCACGGGGACGGTGGACCCCACCGACCCT
GCACTCGCCAGGAGCGTCAAACCCACCGACGGCATAAGGCACCTCCTCAA
GTTCTTCCGCGACGGTCGCTACTGCTTTGCATCCCACCCCCGGTTTCCTC
ACTGGTGCCAGAACCACAACATGCTCGAACGCCACAGGATGCTCAGCAAG
GCGCAGGTCTACCTCAAGCAAAATCCAGGGGACGCCGCCATGACGATAGA
GCACATGAATCATCGGTTCCGGCCGGGTTCGTCGCTGGCGCAGCAGCTCA
CACAGCGCATGTGCCGGTACGGCCGCAACATCACCAGGTCTAGGCCGTAC
TGGTACGCCAAGCAGCAGAAGCTCCAGGCGATTTTTGCCACCAAGGGCTG
CGCCACTCTCTTCTTCACGCTCTCTGCCGCCGACACGCACTGGGACGGCC
TGGTCGACCTCATGCCGCCAGGCTACGAGGACTCCCCAGCAGGCCGACGA
AGGGCGCCCATTGAAAACCCGCACATCGCCGATACCTACTTCGGCAACAG
GGCGGACGGTTTCACCTCCGCCTTCTTCGGCGGTGTACTCCAAGCCCAGT
CGCTGTGGTACAGGCGTGAGTACCAGGAGAGGGTGTAG
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