mRNA_Ecto-sp8_S_contig10991.1357.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10991.1357.1 vs. uniprot
Match: D7G2K5_ECTSI (EsV-1-21 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K5_ECTSI) HSP 1 Score: 154 bits (390), Expect = 2.450e-43 Identity = 73/83 (87.95%), Postives = 77/83 (92.77%), Query Frame = 1
Query: 1 EITCYDLTPLGVLNAHNSVDTDNLKRVRDLLHNAPADRAWRRRGFLVPCRAFPDGMHQNVGSNTPTAHAAVAAEGSPEAHPRS 249
EITCY LTPLGVLNA+NS++TDNLKRVRDLLHNAPADRAWRRRGFLV CRAFPD MHQNVG+NTPTAHAAVA E PEAHPRS
Sbjct: 228 EITCYGLTPLGVLNAYNSMNTDNLKRVRDLLHNAPADRAWRRRGFLVLCRAFPDRMHQNVGNNTPTAHAAVAGEEPPEAHPRS 310
BLAST of mRNA_Ecto-sp8_S_contig10991.1357.1 vs. uniprot
Match: A0A6H5JQY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY3_9PHAE) HSP 1 Score: 144 bits (363), Expect = 2.130e-42 Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 1
Query: 166 MHQNVGSNTPTAHAAVAAEGSPEAHPRSRPRLETPPKSGAGCNSSAAGVEGGQSGICELGSDSPRPGGLNGDLAAWLTSTGE 411
MHQNVG+NTPTA AAVA E SPEAHPRSRPRLETPPKSGAG NSS AGVEGGQSGIC+LGSDSPRPGGLNGD AAWLTSTGE
Sbjct: 1 MHQNVGNNTPTAPAAVAGEESPEAHPRSRPRLETPPKSGAGGNSSTAGVEGGQSGICKLGSDSPRPGGLNGDSAAWLTSTGE 82
BLAST of mRNA_Ecto-sp8_S_contig10991.1357.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 4.380e-7 Identity = 24/34 (70.59%), Postives = 31/34 (91.18%), Query Frame = 1
Query: 61 TDNLKRVRDLLHNAPADRAWRRRGFLVPCRAFPD 162
T++++RVR+LL NAPADRAWRRRG+L+ CRA PD
Sbjct: 298 TEDVERVRELLANAPADRAWRRRGYLIMCRAQPD 331
BLAST of mRNA_Ecto-sp8_S_contig10991.1357.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 56.2 bits (134), Expect = 1.570e-6 Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 1
Query: 55 VDTDNLKRVRDLLHNAPADRAWRRRGFLVPCRAF 156
++ +L+RVRDLL NAPADRAWRRRG LV CRAF
Sbjct: 309 LNKQDLERVRDLLENAPADRAWRRRGLLVLCRAF 342
BLAST of mRNA_Ecto-sp8_S_contig10991.1357.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 55.8 bits (133), Expect = 2.110e-6 Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 1
Query: 55 VDTDNLKRVRDLLHNAPADRAWRRRGFLVPCRAF 156
++ +++RVRDLL NAP DRAWRRRGFLV CRAF
Sbjct: 260 LNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAF 293
BLAST of mRNA_Ecto-sp8_S_contig10991.1357.1 vs. uniprot
Match: A0A6H5JFR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR1_9PHAE) HSP 1 Score: 54.7 bits (130), Expect = 4.000e-6 Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 73 KRVRDLLHNAPADRAWRRRGFLVPCRAFPDGMHQNVGSNTPTAHAA 210
+RV LL NAPADRAWRRRGFL+ CRA+P+ + + S++ AA
Sbjct: 211 ERVYKLLRNAPADRAWRRRGFLLLCRAYPERVPPRLDSSSTLVDAA 256
BLAST of mRNA_Ecto-sp8_S_contig10991.1357.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE) HSP 1 Score: 52.8 bits (125), Expect = 2.300e-5 Identity = 27/59 (45.76%), Postives = 32/59 (54.24%), Query Frame = 1
Query: 70 LKRVRDLLHNAPADRAWRRRGFLVPCRAFPDGMHQNVGSNTPTAHAAVAAEGSPEAHPR 246
L+RV +LL AP DRAWRRRGFLVPC + PD + V A + P H R
Sbjct: 214 LERVSELLARAPQDRAWRRRGFLVPCLSHPDRVQLAVEIPEAATEAIEQTQERPRRHAR 272
BLAST of mRNA_Ecto-sp8_S_contig10991.1357.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 52.4 bits (124), Expect = 3.300e-5 Identity = 25/45 (55.56%), Postives = 30/45 (66.67%), Query Frame = 1
Query: 28 LGVLNAHNSVDTDNLKRVRDLLHNAPADRAWRRRGFLVPCRAFPD 162
+G H + D ++ +R R LL APADRAWRRRG LV CRA PD
Sbjct: 317 IGTRRCHRT-DPEDDERARSLLARAPADRAWRRRGLLVLCRAHPD 360
BLAST of mRNA_Ecto-sp8_S_contig10991.1357.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 51.2 bits (121), Expect = 9.310e-5 Identity = 29/67 (43.28%), Postives = 38/67 (56.72%), Query Frame = 1
Query: 64 DNLKRVRDLLHNAPADRAWRRRGFLVPCRAFPDGMHQNVGSNTPTAHAAVAAEGSPEAHPRSRPRLE 264
+++ RVR LL APADRAWRRRGFL+ RA G G T A AA A+ + + SR ++
Sbjct: 678 EDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEID 744 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10991.1357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10991.1357.1 >prot_Ecto-sp8_S_contig10991.1357.1 ID=prot_Ecto-sp8_S_contig10991.1357.1|Name=mRNA_Ecto-sp8_S_contig10991.1357.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=137bp EITCYDLTPLGVLNAHNSVDTDNLKRVRDLLHNAPADRAWRRRGFLVPCRback to top mRNA from alignment at Ecto-sp8_S_contig10991:109..519+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10991.1357.1 ID=mRNA_Ecto-sp8_S_contig10991.1357.1|Name=mRNA_Ecto-sp8_S_contig10991.1357.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=411bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10991:109..519+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10991:109..519+ >mRNA_Ecto-sp8_S_contig10991.1357.1 ID=mRNA_Ecto-sp8_S_contig10991.1357.1|Name=mRNA_Ecto-sp8_S_contig10991.1357.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=411bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10991:109..519+ (Ectocarpus species8 EcLAC_412)back to top |