mRNA_Ecto-sp8_S_contig1099.1354.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1099.1354.1 vs. uniprot
Match: A0A6H5K232_9PHAE (eIF2B_5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K232_9PHAE) HSP 1 Score: 387 bits (993), Expect = 5.650e-129 Identity = 229/232 (98.71%), Postives = 229/232 (98.71%), Query Frame = 1
Query: 1 MADVDALPEVPPGAEDNAAPKADSTAVEAEVDLSMFDLSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYNYETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALRNAVK 696
MADVDALPEVPPGAEDNA PKADS AVEAEVDLSMFDLSK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYNYETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALRNAVK
Sbjct: 27 MADVDALPEVPPGAEDNAVPKADSAAVEAEVDLSMFDLSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYNYETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALRNAVK 258
BLAST of mRNA_Ecto-sp8_S_contig1099.1354.1 vs. uniprot
Match: A0A836CND3_9STRA (Eukaryotic initiation factor 2 beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND3_9STRA) HSP 1 Score: 312 bits (799), Expect = 3.490e-100 Identity = 150/161 (93.17%), Postives = 157/161 (97.52%), Query Frame = 1
Query: 214 YNYETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALRNAVK 696
Y YETLLERIQ LLHVNNPEL+ERSRITLKPPQLMRMGTRKT+WANFQ+IC+LMKR PEHVFSFVVAELGTEGS+DGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRL FVHCQDCGSSRSVAP+RSGFHAQTRADRRA+RNAVK
Sbjct: 70 YPYETLLERIQTLLHVNNPELSERSRITLKPPQLMRMGTRKTVWANFQEICKLMKRSPEHVFSFVVAELGTEGSVDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLHFVHCQDCGSSRSVAPVRSGFHAQTRADRRAIRNAVK 230
BLAST of mRNA_Ecto-sp8_S_contig1099.1354.1 vs. uniprot
Match: A0A7S2D5T9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D5T9_9STRA) HSP 1 Score: 275 bits (703), Expect = 6.140e-86 Identity = 129/157 (82.17%), Postives = 144/157 (91.72%), Query Frame = 1
Query: 214 YNYETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALR 684
Y YE LL+R+ +++H NP+L E+ R TLKPPQLMR+GT+KTLWANFQDIC+ M+R PEHVFSF +AELGTEGSIDGNQRLV+RGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRD VSRLFF+HCQDCGSSRSVAPIR GFHAQTRADRRA+R
Sbjct: 64 YAYEELLQRVVDIIHNKNPDLIEKRRTTLKPPQLMRIGTKKTLWANFQDICKSMRRNPEHVFSFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDSVSRLFFMHCQDCGSSRSVAPIRQGFHAQTRADRRAMR 220
BLAST of mRNA_Ecto-sp8_S_contig1099.1354.1 vs. uniprot
Match: A0A7S2SBF4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBF4_9STRA) HSP 1 Score: 268 bits (686), Expect = 2.770e-83 Identity = 123/157 (78.34%), Postives = 144/157 (91.72%), Query Frame = 1
Query: 214 YNYETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALR 684
Y+Y+ LL+R+ +++H NPEL E+ R T+KPP LMR+GT+KTLWANFQDIC+ M+R PEHVF F +AELGTEGSIDGNQRLV+RGKYVPKYIESLLRKYIVEYVTCQMCRSPNT+LTRD VSRL+F++CQDCGSSRSVAPIR+GFHAQTRADRRA+R
Sbjct: 72 YSYDQLLQRVVDIIHNKNPELTEKKRTTIKPPMLMRIGTKKTLWANFQDICKSMRRNPEHVFQFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTSLTRDSVSRLYFINCQDCGSSRSVAPIRAGFHAQTRADRRAMR 228
BLAST of mRNA_Ecto-sp8_S_contig1099.1354.1 vs. uniprot
Match: F0XZH3_AURAN (eIF2B_5 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZH3_AURAN) HSP 1 Score: 261 bits (668), Expect = 1.060e-81 Identity = 121/154 (78.57%), Postives = 140/154 (90.91%), Query Frame = 1
Query: 214 YNYETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRR 675
Y+Y+ LL+R+ +L NNPEL+E+ R T+KPPQLMR+GT+KTLW NFQ+IC++M R PEHVF F +AELGTEGSIDG QRLV+RGKYVPKYIESLLRKYIVEYVTCQMCRSP+T+LTRD VSRLFF+HCQDCGSSRSVAPIR+GFHAQTRADRR
Sbjct: 1 YSYKELLDRVVGILQANNPELSEKRRHTMKPPQLMRVGTKKTLWVNFQEICKMMHRSPEHVFQFFMAELGTEGSIDGTQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPSTSLTRDSVSRLFFLHCQDCGSSRSVAPIRAGFHAQTRADRR 154
BLAST of mRNA_Ecto-sp8_S_contig1099.1354.1 vs. uniprot
Match: A0A7S2SBF3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBF3_9STRA) HSP 1 Score: 268 bits (686), Expect = 7.020e-80 Identity = 123/157 (78.34%), Postives = 144/157 (91.72%), Query Frame = 1
Query: 214 YNYETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALR 684
Y+Y+ LL+R+ +++H NPEL E+ R T+KPP LMR+GT+KTLWANFQDIC+ M+R PEHVF F +AELGTEGSIDGNQRLV+RGKYVPKYIESLLRKYIVEYVTCQMCRSPNT+LTRD VSRL+F++CQDCGSSRSVAPIR+GFHAQTRADRRA+R
Sbjct: 328 YSYDQLLQRVVDIIHNKNPELTEKKRTTIKPPMLMRIGTKKTLWANFQDICKSMRRNPEHVFQFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTSLTRDSVSRLYFINCQDCGSSRSVAPIRAGFHAQTRADRRAMR 484
BLAST of mRNA_Ecto-sp8_S_contig1099.1354.1 vs. uniprot
Match: M4B8Q4_HYAAE (eIF2B_5 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8Q4_HYAAE) HSP 1 Score: 256 bits (655), Expect = 1.540e-79 Identity = 124/158 (78.48%), Postives = 137/158 (86.71%), Query Frame = 1
Query: 214 YNY-ETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALR 684
Y+Y + LL RI LH NNPEL +R R T+KPPQLMR+GT+KTLW NFQ+ICQ+M R PEHV F +AELGTEGSIDGNQRLV+RG+YVPKYIESLLRKYI EYV+CQMCRSPNTTLTRD VSRL+FVHCQDCGSSRSVA IRSGFHA TRADRRA R
Sbjct: 11 YSYKDELLARIIAKLHENNPELTDRKRHTMKPPQLMRVGTKKTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFHAATRADRRAAR 168
BLAST of mRNA_Ecto-sp8_S_contig1099.1354.1 vs. uniprot
Match: A0A6V1N6Q0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N6Q0_HETAK) HSP 1 Score: 258 bits (659), Expect = 3.960e-79 Identity = 122/157 (77.71%), Postives = 139/157 (88.54%), Query Frame = 1
Query: 214 YNYETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALR 684
Y Y+ LLERI ++LH NPEL+E+ R T+KPPQ+MR+GTRKT+W NFQ+IC+ MKR PEHVF FVV+ELGTEGSIDG Q+LVLRG+ PKYIESLLRKYIVEYVTCQMCR+ NTTLTRD VSRLFFVHCQDCGSSR VA IR+GFHAQTRA+RRALR
Sbjct: 81 YTYDELLERINDILHDKNPELSEKRRQTIKPPQMMRIGTRKTVWTNFQEICKSMKRNPEHVFQFVVSELGTEGSIDGKQQLVLRGRLYPKYIESLLRKYIVEYVTCQMCRAANTTLTRDQVSRLFFVHCQDCGSSRCVAQIRAGFHAQTRAERRALR 237
BLAST of mRNA_Ecto-sp8_S_contig1099.1354.1 vs. uniprot
Match: A0A662XXW3_9STRA (eIF2B_5 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXW3_9STRA) HSP 1 Score: 258 bits (658), Expect = 5.220e-79 Identity = 123/158 (77.85%), Postives = 138/158 (87.34%), Query Frame = 1
Query: 214 YNY-ETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALR 684
Y+Y + LL RI + LH NNPEL +R R T+KPPQLMR+GT+KTLW NFQ+ICQ+M R PEHV F ++ELGTEGSIDGNQRLV+RG+YVPKYIESLLRKYI EYV+CQMCRSPNTTLTRD VSRL+FVHCQDCGSSRSVA IRSGFHA TRADRRA R
Sbjct: 78 YSYKDELLARIMSKLHENNPELTDRKRHTMKPPQLMRVGTKKTLWVNFQEICQMMHRSPEHVLQFTLSELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFHAATRADRRAAR 235
BLAST of mRNA_Ecto-sp8_S_contig1099.1354.1 vs. uniprot
Match: A0A5D6XJH0_9STRA (eIF2B_5 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJH0_9STRA) HSP 1 Score: 257 bits (656), Expect = 8.770e-79 Identity = 122/154 (79.22%), Postives = 135/154 (87.66%), Query Frame = 1
Query: 223 ETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALR 684
+ LL RI LH NNPEL +R R T+KPPQLMR+GT+KTLW NFQ+ICQ+M R PEHV F +AELGTEGSIDGNQRLV+RG+YVPKYIESLLRKYI+EYV+CQMCRSPNTTLTRD VSRL+FVHCQDCGSSRSVA IRSGFHA TRADRRA R
Sbjct: 77 DELLARILAKLHENNPELTDRKRTTMKPPQLMRVGTKKTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYIMEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFHAATRADRRAAR 230 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1099.1354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1099.1354.1 >prot_Ecto-sp8_S_contig1099.1354.1 ID=prot_Ecto-sp8_S_contig1099.1354.1|Name=mRNA_Ecto-sp8_S_contig1099.1354.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=233bp MADVDALPEVPPGAEDNAAPKADSTAVEAEVDLSMFDLSKKKKKKKKKVKback to top mRNA from alignment at Ecto-sp8_S_contig1099:4390..12051- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1099.1354.1 ID=mRNA_Ecto-sp8_S_contig1099.1354.1|Name=mRNA_Ecto-sp8_S_contig1099.1354.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=7662bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1099:4390..12051- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1099:4390..12051- >mRNA_Ecto-sp8_S_contig1099.1354.1 ID=mRNA_Ecto-sp8_S_contig1099.1354.1|Name=mRNA_Ecto-sp8_S_contig1099.1354.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=699bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1099:4390..12051- (Ectocarpus species8 EcLAC_412)back to top |