mRNA_Ecto-sp8_S_contig1099.1353.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1099.1353.1 vs. uniprot
Match: D7G234_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G234_ECTSI) HSP 1 Score: 281 bits (720), Expect = 2.340e-93 Identity = 159/169 (94.08%), Postives = 161/169 (95.27%), Query Frame = 1
Query: 1 MKFTMVLTLLAFGNTGAFLVSAPLSGRTAAEAAQAIGTSSACGAEDWARFARRRSAGLCMATNSELDQSAEYVKAELARVQEEYEANRKAKIKEQTRQAAARGDAAVTPLADLDFHSFLDKDGKVASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRPK 507
MK TMVLTLLAFGNT AFLVSAPLSGRTAA AA +GTSS C AEDWA FARRRSAGLCMATNSELDQSAEYVKAELARVQEEYEANRKAKIKEQTRQAAARGDAAVTPLADL+FHSFLDKDGKVASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRPK
Sbjct: 1 MKLTMVLTLLAFGNTRAFLVSAPLSGRTAAAAA--MGTSSVCRAEDWAGFARRRSAGLCMATNSELDQSAEYVKAELARVQEEYEANRKAKIKEQTRQAAARGDAAVTPLADLEFHSFLDKDGKVASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRPK 167
BLAST of mRNA_Ecto-sp8_S_contig1099.1353.1 vs. uniprot
Match: A0A4D9CSA1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSA1_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 4.470e-19 Identity = 60/121 (49.59%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 157 RRSAGLCMATNSELDQSAEYVKAELARVQEEYEANRKAKIKEQTRQAAARGDAA--VTPLADLDFHSFLDKDGKV--ASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRPK 507
R++A L T++ LD A++VKAELAR ++EY+A+ KA+I + A D A + PL L + +LD+ GK+ D K VKASVYA+YDES+T+RYIGVSR + QSLRL LAR P+
Sbjct: 38 RQTAALEAGTSASLDDQADFVKAELARKKQEYDASLKARISA----SVANADVADSIPPLDSLPYVPYLDETGKINDCGADAK-VKASVYALYDESETVRYIGVSRSVAQSLRLHLARMPE 153
BLAST of mRNA_Ecto-sp8_S_contig1099.1353.1 vs. uniprot
Match: K8YTT3_NANGC (Protein atypical group n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YTT3_NANGC) HSP 1 Score: 91.3 bits (225), Expect = 2.210e-18 Identity = 60/121 (49.59%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 157 RRSAGLCMATNSELDQSAEYVKAELARVQEEYEANRKAKIKEQTRQAAARGDAA--VTPLADLDFHSFLDKDGKV--ASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRPK 507
R++A L T++ LD A++VKAELAR ++EY+A+ KA+I + A D A + PL L + +LD+ GK+ D K VKASVYA+YDES+T+RYIGVSR + QSLRL LAR P+
Sbjct: 38 RQTAALEAGTSASLDDQADFVKAELARKKQEYDASLKARISA----SVANADVADSIPPLDSLPYVPYLDETGKINDCGADAK-VKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPE 153
BLAST of mRNA_Ecto-sp8_S_contig1099.1353.1 vs. uniprot
Match: A0A836CJ14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ14_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 7.750e-17 Identity = 52/107 (48.60%), Postives = 72/107 (67.29%), Query Frame = 1
Query: 190 SELDQSAEYVKAELARVQEEYEANRKAKIKEQTRQAAARGDAAVTPLADLDFHSFLDKDGKVASIDT-KGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRPK 507
S LD A+YVK +L + YEA R+A + +++ RGD AV PL+ L +L+++G V+ + +GVKASVYAVYD + L+YIGVSR +QQSLRL LAR P+
Sbjct: 44 SNLDADADYVKQQLKLKEAAYEAKRRADAAQSAKRS--RGDTAVDPLSSLPMIPYLNEEGLVSDVGAARGVKASVYAVYDATPALQYIGVSRSVQQSLRLHLARCPE 148
BLAST of mRNA_Ecto-sp8_S_contig1099.1353.1 vs. uniprot
Match: A0A0G4GGJ4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GGJ4_VITBC) HSP 1 Score: 80.1 bits (196), Expect = 3.380e-15 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query: 211 EYVKAELARVQEEYEANRKAKIKEQTRQAAARGDAAVTPLADLDFHSFLDKDGKVASID-TKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRPK 507
EY K +L + Y + ++K +T + A GD ++ L+ L +L DGKV S D T GVKASVYA+YDE KTL+++GV+R I+QSL L LAR P+
Sbjct: 7 EYTKQQLKEKESRYHHELQQRLKAETDRLRASGDVSIPSLSSLPLMPYLTPDGKVTSADVTPGVKASVYAIYDEGKTLQHVGVTRSIRQSLLLHLARMPQ 106
BLAST of mRNA_Ecto-sp8_S_contig1099.1353.1 vs. uniprot
Match: A0A1Y1IDT5_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IDT5_KLENI) HSP 1 Score: 73.9 bits (180), Expect = 1.520e-12 Identity = 49/106 (46.23%), Postives = 61/106 (57.55%), Query Frame = 1
Query: 199 DQSAEYVKAELARVQEEYEANRKAKIKEQTRQAAAR----GDAAVTPLADLDFHSFLDKDGKVASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRP 504
DQ AE +A A + EYE RQAAAR G A VTPLA+L FL ++GK+A KASVYA++DE K +R++G+SR I SLRL AR P
Sbjct: 84 DQHAEATRAATAAAKAEYE----------RRQAAARRAGRGAAPVTPLAELPLVPFLTEEGKIADCSQADAKASVYAIFDEEKVVRHVGISRAIGPSLRLHFARVP 179
BLAST of mRNA_Ecto-sp8_S_contig1099.1353.1 vs. uniprot
Match: A0A388KW50_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KW50_CHABU) HSP 1 Score: 67.8 bits (164), Expect = 3.320e-10 Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 271 KIKEQTRQAAARGDAAVTPLADLDFHSFLDKDGKVASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRP 504
++++Q +++ D +V L DL++ ++ ++GK+ G KASV+AV+DE KTL+Y+G+SR + QS+RL AR P
Sbjct: 174 RLQQQHQRSGTGADKSVVRLRDLEYQPYVTEEGKIVDCTKAGAKASVFAVFDEDKTLQYVGMSRQVYQSMRLHFARMP 251
BLAST of mRNA_Ecto-sp8_S_contig1099.1353.1 vs. uniprot
Match: A0A2K1K7G9_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K7G9_PHYPA) HSP 1 Score: 64.7 bits (156), Expect = 2.060e-9 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 199 DQSAEYVKAELARVQEEYEANRKAKIKEQTRQAAARGDAAVTPLADLDFHSFLDKDGKVASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRP 504
D+ E + A+ QEEY K ++ R+ + +G V+ L+ L++ +L ++G +A G KAS+YA++DE+KTL +IG+SR + QS+RL ARRP
Sbjct: 27 DEHQERTRQATAQAQEEYR-----KRQDALRRQSMQGGEGVS-LSSLEYIPYLTEEGHIADCTEPGAKASLYAIFDENKTLCFIGISRQVYQSMRLHFARRP 122
BLAST of mRNA_Ecto-sp8_S_contig1099.1353.1 vs. uniprot
Match: A0A176W0C8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W0C8_MARPO) HSP 1 Score: 63.2 bits (152), Expect = 1.210e-8 Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 1
Query: 199 DQSAEYVKAELARVQEEYEANRKAKIKEQTRQAAARGDAAVTPLADLDFHSFLDKDGKVASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRP 504
D+ A + A QEEY K EQ RQ A G V L +++ +L ++G +A I +KASVYA++D++KTL+Y+GV+R + QS+RL AR P
Sbjct: 101 DEHAAATRQATALAQEEYFK----KQAEQRRQQAGAG--LVEKLDSMEYTPYLTEEGLIADITKPDIKASVYAIFDDAKTLQYVGVTRQVYQSMRLHFARFP 196
BLAST of mRNA_Ecto-sp8_S_contig1099.1353.1 vs. uniprot
Match: A0A7S0MTT5_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MTT5_9CHLO) HSP 1 Score: 57.0 bits (136), Expect = 1.570e-6 Identity = 32/77 (41.56%), Postives = 43/77 (55.84%), Query Frame = 1
Query: 292 QAAARGDAA------VTPLADLDFHSFLDKDGKVASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRP 504
Q AARG PLADL ++ +G +A G +A+VYA++D L+Y+G+SR I SLRL LAR P
Sbjct: 95 QQAARGGPGKVPPELAVPLADLPEVEYITSEGLIADCSKAGARATVYAIFDAEHALQYVGMSRSINPSLRLHLARMP 171 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1099.1353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1099.1353.1 >prot_Ecto-sp8_S_contig1099.1353.1 ID=prot_Ecto-sp8_S_contig1099.1353.1|Name=mRNA_Ecto-sp8_S_contig1099.1353.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=169bp MKFTMVLTLLAFGNTGAFLVSAPLSGRTAAEAAQAIGTSSACGAEDWARFback to top mRNA from alignment at Ecto-sp8_S_contig1099:1..3427- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1099.1353.1 ID=mRNA_Ecto-sp8_S_contig1099.1353.1|Name=mRNA_Ecto-sp8_S_contig1099.1353.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3427bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1099:1..3427- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1099:1..3427- >mRNA_Ecto-sp8_S_contig1099.1353.1 ID=mRNA_Ecto-sp8_S_contig1099.1353.1|Name=mRNA_Ecto-sp8_S_contig1099.1353.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=507bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1099:1..3427- (Ectocarpus species8 EcLAC_412)back to top |