mRNA_Ecto-sp8_S_contig10985.1350.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10985.1350.1
Unique NamemRNA_Ecto-sp8_S_contig10985.1350.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10985.1350.1 vs. uniprot
Match: A0A7S2BC10_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BC10_9STRA)

HSP 1 Score: 241 bits (615), Expect = 2.270e-77
Identity = 111/140 (79.29%), Postives = 129/140 (92.14%), Query Frame = 3 
Query:  384 QFYCRYYVGHKGKFGHEFMEFEFSSSGKLRYANNSNYKNDTMIRKEVTVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 803
            +FYCRYY GHKGKFGHEFMEFEF  +G LRYAN+SNYKN  MIRKEVTVS +VLDE++RII+E++I  EDD+NWPEPDRVGRQELE+K+G EHISFTCSKIGSLLDVQ+S+DP+GLRIFYYL+QDLKC VFSLI+LHFK+
Sbjct:   12 EFYCRYYTGHKGKFGHEFMEFEFQPNGNLRYANDSNYKNAVMIRKEVTVSSAVLDELKRIIEESEITKEDDNNWPEPDRVGRQELEIKIGSEHISFTCSKIGSLLDVQDSSDPDGLRIFYYLVQDLKCFVFSLISLHFKI 151
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BLAST of mRNA_Ecto-sp8_S_contig10985.1350.1 vs. uniprot
Match: D7FPG1_ECTSI (Mago nashi n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPG1_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 3.840e-77
Identity = 120/121 (99.17%), Postives = 121/121 (100.00%), Query Frame = 3 
Query:  438 MEFEFSSSGKLRYANNSNYKNDTMIRKEVTVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFK 800
            MEFEFSS+GKLRYANNSNYKNDTMIRKEVTVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFK
Sbjct:    1 MEFEFSSTGKLRYANNSNYKNDTMIRKEVTVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFK 121
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BLAST of mRNA_Ecto-sp8_S_contig10985.1350.1 vs. uniprot
Match: A0A7S3HJ49_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ49_9STRA)

HSP 1 Score: 240 bits (613), Expect = 3.980e-77
Identity = 110/143 (76.92%), Postives = 130/143 (90.91%), Query Frame = 3 
Query:  375 MADQFYCRYYVGHKGKFGHEFMEFEFSSSGKLRYANNSNYKNDTMIRKEVTVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 803
            M+D FYCRYYVGHKGKFGHEF+EFE +S G+LRYANNSNYKNDTMIRKEV +S  V++E++RII E++I  EDD NWPEPD++GRQELE+K+ KEHISFT SKIGSLL+VQES+DPEG RIFYYL+QDLKCLVFSLI+LHFK+
Sbjct:    5 MSDDFYCRYYVGHKGKFGHEFLEFEITSDGRLRYANNSNYKNDTMIRKEVKLSPLVIEEIKRIISESEITKEDDRNWPEPDKIGRQELEIKINKEHISFTASKIGSLLNVQESSDPEGFRIFYYLVQDLKCLVFSLISLHFKI 147
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BLAST of mRNA_Ecto-sp8_S_contig10985.1350.1 vs. uniprot
Match: H3HCT8_PHYRM (Uncharacterized protein n=16 Tax=Peronosporaceae TaxID=4777 RepID=H3HCT8_PHYRM)

HSP 1 Score: 239 bits (611), Expect = 7.490e-77
Identity = 112/144 (77.78%), Postives = 128/144 (88.89%), Query Frame = 3 
Query:  372 AMADQFYCRYYVGHKGKFGHEFMEFEFSSSGKLRYANNSNYKNDTMIRKEVTVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 803
            A  D FY RYYVGH+GKFGHEFMEFEF + GKLRYANNSNYK D+MIRKEVTVSQSV+DEV+RII +++I  EDD  WPEPDRVGRQELE+ LG +HISFTC+KIGSLLDVQ+S DPEGLR+ YYL+QDLKCLVFS+ITLHFK+
Sbjct:    2 ARDDDFYVRYYVGHRGKFGHEFMEFEFRADGKLRYANNSNYKKDSMIRKEVTVSQSVIDEVKRIISDSEITKEDDKEWPEPDRVGRQELEIVLGNDHISFTCAKIGSLLDVQDSKDPEGLRVLYYLVQDLKCLVFSMITLHFKI 145
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BLAST of mRNA_Ecto-sp8_S_contig10985.1350.1 vs. uniprot
Match: A0A7S2Y0B6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0B6_9STRA)

HSP 1 Score: 240 bits (613), Expect = 9.520e-77
Identity = 112/141 (79.43%), Postives = 129/141 (91.49%), Query Frame = 3 
Query:  381 DQFYCRYYVGHKGKFGHEFMEFEFSSSGKLRYANNSNYKNDTMIRKEVTVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 803
            ++FYCRYYVGHKGK+GHEFMEFEF+  G LRYANNSNYKND MIRKEV  S +V++E++RIIQE++I  EDD+ WPEPDRVGRQELEVK+G EHISFTC+KIGSLLDVQES+DPEGLRIFYYL+QDLKCLVFSLI LHFK+
Sbjct:   33 EEFYCRYYVGHKGKYGHEFMEFEFNPDGLLRYANNSNYKNDIMIRKEVNCSPAVIEELKRIIQESEITREDDNQWPEPDRVGRQELEVKIGNEHISFTCAKIGSLLDVQESSDPEGLRIFYYLVQDLKCLVFSLIGLHFKI 173
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BLAST of mRNA_Ecto-sp8_S_contig10985.1350.1 vs. uniprot
Match: A0A061R5Q6_9CHLO (Protein mago nashi n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5Q6_9CHLO)

HSP 1 Score: 238 bits (608), Expect = 2.060e-76
Identity = 110/146 (75.34%), Postives = 132/146 (90.41%), Query Frame = 3 
Query:  375 MADQFYCRYYVGHKGKFGHEFMEFEFSSSGKLRYANNSNYKNDTMIRKEVTVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKVHGL 812
            MAD+FY RYYVGHKGKFGHEF+EFEF   GKLRYANNSNYKNDTMIRKEV VSQ+V+DEV+RII++++I+ EDD +WPEPDR+GRQELEV +G +HISF  +KIGSLL+VQ+S DPEGLRIFYYL+QDLKCLVFSL++LHFK+  +
Sbjct:    1 MADEFYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYVSQAVMDEVKRIIEDSEILNEDDDSWPEPDRIGRQELEVVMGNDHISFATTKIGSLLEVQQSKDPEGLRIFYYLVQDLKCLVFSLVSLHFKIQPI 146
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BLAST of mRNA_Ecto-sp8_S_contig10985.1350.1 vs. uniprot
Match: B6SJN3_MAIZE (Protein mago nashi n=4 Tax=Poaceae TaxID=4479 RepID=B6SJN3_MAIZE)

HSP 1 Score: 236 bits (602), Expect = 2.960e-75
Identity = 113/144 (78.47%), Postives = 125/144 (86.81%), Query Frame = 3 
Query:  384 QFYCRYYVGHKGKFGHEFMEFEFSSSGKLRYANNSNYKNDTMIRKEVTVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKVHGLK 815
            +FY RYYVGHKGKFGHEF+EFEF   GKLRYANNSNYKNDTMIRKEV VS SVL E RRIIQE+DI+ EDD NWPEPDR+GRQELE+ +G EHISFT SKIGSL+DVQ S DPEGLRIFYYL+QDLKC VFSLI LHFK+  ++
Sbjct:   21 EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQ 164
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BLAST of mRNA_Ecto-sp8_S_contig10985.1350.1 vs. uniprot
Match: A0A8J2SV48_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SV48_9STRA)

HSP 1 Score: 234 bits (597), Expect = 9.610e-75
Identity = 112/140 (80.00%), Postives = 125/140 (89.29%), Query Frame = 3 
Query:  384 QFYCRYYVGHKGKFGHEFMEFEFSSSGKLRYANNSNYKNDTMIRKEVTVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 803
            +FY RYYVGH+GKFGHEFMEFEF+S+GKLRYANNSNYKND+MIRKEVTVS +VLDE+ RII +A+I  EDD  WPEPDRVGRQELEV    EHISFTC+KIGSLLDVQES DPEGLR FYYL+QDLKC VFSLI+LHFK+
Sbjct:    5 EFYLRYYVGHRGKFGHEFMEFEFASTGKLRYANNSNYKNDSMIRKEVTVSDAVLDEIERIITDAEITKEDDSEWPEPDRVGRQELEVISNGEHISFTCAKIGSLLDVQESKDPEGLRCFYYLVQDLKCAVFSLISLHFKI 144
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BLAST of mRNA_Ecto-sp8_S_contig10985.1350.1 vs. uniprot
Match: A0A024U8F3_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U8F3_9STRA)

HSP 1 Score: 234 bits (596), Expect = 1.410e-74
Identity = 109/142 (76.76%), Postives = 126/142 (88.73%), Query Frame = 3 
Query:  378 ADQFYCRYYVGHKGKFGHEFMEFEFSSSGKLRYANNSNYKNDTMIRKEVTVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 803
            +D FY RYYVGHKGKFGHE+MEFEF + GKLRYANNSNYKNDT+I+KEVT+SQSV+DEV+RII  ++II EDD  WPE DRVG+QELE+    EHI FTC+KIGSLLDVQ+SNDPEGLR+FYYL+QDLKC VFSLITLHFK+
Sbjct:    4 SDDFYLRYYVGHKGKFGHEYMEFEFHADGKLRYANNSNYKNDTLIKKEVTLSQSVIDEVKRIIDTSEIIKEDDSKWPESDRVGKQELEIVHNDEHICFTCAKIGSLLDVQDSNDPEGLRVFYYLVQDLKCFVFSLITLHFKI 145
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BLAST of mRNA_Ecto-sp8_S_contig10985.1350.1 vs. uniprot
Match: I1I0C2_BRADI (Uncharacterized protein n=6 Tax=BOP clade TaxID=359160 RepID=I1I0C2_BRADI)

HSP 1 Score: 234 bits (597), Expect = 1.640e-74
Identity = 112/144 (77.78%), Postives = 126/144 (87.50%), Query Frame = 3 
Query:  384 QFYCRYYVGHKGKFGHEFMEFEFSSSGKLRYANNSNYKNDTMIRKEVTVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKVHGLK 815
            +FY RYYVGHKGKFGHEF+EFEF   GKLRYANNSNYKNDTMIRKEV VS SVL E RRIIQ+++I+ EDD+NWPEPDRVGRQELE+ +G EHISFT SKIGSL+DVQ S DPEGLRIFYYL+QDLKC VFSLI LHFK+  ++
Sbjct:   20 EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQDSEIMREDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQTSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQ 163
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10985.1350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2BC10_9STRA2.270e-7779.29Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D7FPG1_ECTSI3.840e-7799.17Mago nashi n=2 Tax=Ectocarpus TaxID=2879 RepID=D7F... [more]
A0A7S3HJ49_9STRA3.980e-7776.92Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
H3HCT8_PHYRM7.490e-7777.78Uncharacterized protein n=16 Tax=Peronosporaceae T... [more]
A0A7S2Y0B6_9STRA9.520e-7779.43Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A061R5Q6_9CHLO2.060e-7675.34Protein mago nashi n=1 Tax=Tetraselmis sp. GSL018 ... [more]
B6SJN3_MAIZE2.960e-7578.47Protein mago nashi n=4 Tax=Poaceae TaxID=4479 RepI... [more]
A0A8J2SV48_9STRA9.610e-7580.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A024U8F3_9STRA1.410e-7476.76Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]
I1I0C2_BRADI1.640e-7477.78Uncharacterized protein n=6 Tax=BOP clade TaxID=35... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10985contigEcto-sp8_S_contig10985:2248..4915 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score242.3
Seed ortholog evalue1.7e-61
Seed eggNOG ortholog4792.ETI45490
Preferred nameMAGOH
Model size881
KEGG koko:K12877
KEGG Pathwayko03013,ko03015,ko03040,map03013,map03015,map03040
KEGG ModuleM00430
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000018,GO:0000184,GO:0000226,GO:0000335,GO:0000337,GO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0000578,GO:0000956,GO:0003002,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005730,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006935,GO:0006996,GO:0007010,GO:0007017,GO:0007028,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007173,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007315,GO:0007316,GO:0007317,GO:0007350,GO:0007351,GO:0007389,GO:0008103,GO:0008104,GO:0008150,GO:0008152,GO:0008298,GO:0008358,GO:0008380,GO:0008595,GO:0009056,GO:0009057,GO:0009507,GO:0009536,GO:0009605,GO:0009790,GO:0009791,GO:0009793,GO:0009798,GO:0009856,GO:0009880,GO:0009892,GO:0009893,GO:0009948,GO:0009952,GO:0009987,GO:0009994,GO:0010154,GO:0010183,GO:0010467,GO:0010468,GO:0010528,GO:0010529,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0016325,GO:0016604,GO:0016607,GO:0019094,GO:0019219,GO:0019222,GO:0019439,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030951,GO:0030952,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031503,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032991,GO:0033036,GO:0034613,GO:0034641,GO:0034655,GO:0035145,GO:0035282,GO:0036477,GO:0038127,GO:0040011,GO:0042221,GO:0042330,GO:0042886,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043900,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0044706,GO:0045184,GO:0045292,GO:0045451,GO:0045495,GO:0045595,GO:0045910,GO:0045934,GO:0045995,GO:0046483,GO:0046594,GO:0046700,GO:0046907,GO:0048024,GO:0048316,GO:0048468,GO:0048469,GO:0048477,GO:0048518,GO:0048519,GO:0048523,GO:0048599,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0048868,GO:0048869,GO:0050657,GO:0050658,GO:0050684,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0050918,GO:0051028,GO:0051052,GO:0051053,GO:0051128,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051235,GO:0051236,GO:0051237,GO:0051239,GO:0051252,GO:0051641,GO:0051649,GO:0051651,GO:0051704,GO:0051716,GO:0060255,GO:0060281,GO:0060284,GO:0060341,GO:0060810,GO:0060811,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0071013,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0080090,GO:0090304,GO:0097458,GO:1901360,GO:1901361,GO:1901575,GO:1902494,GO:1902875,GO:1903311,GO:1903429,GO:1904580,GO:1905879,GO:1990904,GO:2000026,GO:2000241
Exons4
EggNOG free text desc.Mago nashi protein
EggNOG OGs3QD3E@4776,KOG3392@1,KOG3392@2759
Cds size507
COG Functional cat.A
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143185.2930562-CDS-Ecto-sp8_S_contig10985:2247..24541681143185.2930562-CDS-Ecto-sp8_S_contig10985:2247..2454Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10985 2248..2454 -
1681143185.302072-CDS-Ecto-sp8_S_contig10985:2703..27911681143185.302072-CDS-Ecto-sp8_S_contig10985:2703..2791Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10985 2704..2791 -
1681143185.309554-CDS-Ecto-sp8_S_contig10985:3356..35391681143185.309554-CDS-Ecto-sp8_S_contig10985:3356..3539Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10985 3357..3539 -
1681143185.3170984-CDS-Ecto-sp8_S_contig10985:4512..45411681143185.3170984-CDS-Ecto-sp8_S_contig10985:4512..4541Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10985 4513..4541 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143185.3250697-UTR-Ecto-sp8_S_contig10985:4541..49151681143185.3250697-UTR-Ecto-sp8_S_contig10985:4541..4915Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10985 4542..4915 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10985.1350.1prot_Ecto-sp8_S_contig10985.1350.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10985 2248..4541 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10985.1350.1

>prot_Ecto-sp8_S_contig10985.1350.1 ID=prot_Ecto-sp8_S_contig10985.1350.1|Name=mRNA_Ecto-sp8_S_contig10985.1350.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=169bp
MADQFYCRYYVGHKGKFGHEFMEFEFSSSGKLRYANNSNYKNDTMIRKEV
TVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFT
CSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKVHGLKQAS
NRHKDELLFLFESVVSLL*
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mRNA from alignment at Ecto-sp8_S_contig10985:2248..4915-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10985.1350.1 ID=mRNA_Ecto-sp8_S_contig10985.1350.1|Name=mRNA_Ecto-sp8_S_contig10985.1350.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2668bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10985:2248..4915- (Ectocarpus species8 EcLAC_412)
AAGCAGCACACAGCAGCCAGCAGCCTCTCCCGCGCGCCACGCGGGCACAC
ACACTTGGGAGTTCGGCAGGTATGGCTACAGAGGGGGCCCCGTCAAAGGG
CCGCGACCCGCCACAGCTGCCGCACGTGGTGTCCTCACCAACCGAAGCGA
GGGAGAGAGGGATAGAAGGCACTTTCCAGTGTGCGTGTCAGGCAGAAAGA
GGGCGAAGGGAGACTCCGTAGTGGACAGAAGCAGCCGTCTCGAATTGAGA
GCCAGAGGATACATTTTTTGCGGGCGGGGGGTTACGACAGGTGGACCGCC
GCCGGTGTTTGCTCTCCGCCGCTGCTGGGAGGAGAGGGCGCGCGGAGATC
AGAGCGGATCGGGCTAGTTCTGCCATGGCAGACCAGTTCTACTGCCGTTA
CTAGTGAGTGGTGAATCAAAACCAGCCGTTTCGTTCTGCTTCGGTTGCGT
AACGTTTCTCTGGCAGGGGCGGCGCGGGAGAGGTTACGCGCGATCCCATC
CCGCGTGGCCTCTGCTCTTGTCTTCGAATCAGAGTTAGGCCCTCTGGGCA
CAGGGCACAGCAGTATAAAGATAAACGAGGAAAGATATGTGTCAATGCGA
TGAAGGCGCGTGCATCGGTGGCGCACGAATTTTCCTGCATTTCCCGGTCG
TACACTCCTGGCCGTTGTCGGCGCGAACGCAGGCGTGTCGGTGCGATGTT
ACGACCGCCAACAACGGGAGGGAATCTAGGTGTCGGCTAGGCAGGTTGTT
CTGCGGCCCCTTCGTGAGCGCTTCTCTGGTACATTCTCGACTTGAGATCC
ATCTTCTTCCCTCATCGTGTTCTTCCTTTGACTCACACTCCGCTCTACGC
TCTCATGTATCTTCACTTCGCCATCGTACTGAGGAATCTAAAAACTTGCG
TAGGTGTACGTAGGTAGGAACAGCAGTCCATTTTTTTTTTTATGTACAAT
ACATTACATTCAAGGAAGACGTCCACGACACCCCTTTTTATGGGGCTGAA
CAGGCTTTGAGGTCCTTGCCTTGTGGGTTTGCTCAGAGTGTCTCTCTTTT
GGCCGAAACAGAAACGCCGCGGAGTGAAAGGCTATTGAAACTCCCAATGC
GAAGCTCTTTACAAGAGACAGGTCTGGTACCTGCAGTACACCCGTTGTCG
GATCTACATGGGTTGCATAAAAACATGAGCAGGCGTAGTCTGGCTGGACC
TTGGATCCTATTACGGAGAAATTGTTCTGTGTGACCCCGCGGACCAAAGC
TCGCCAGTTATGAACAAGTAAAGGCCGTGGGGTAGTGAACATACATTCGT
GCCGCCTGTTGAAAACCGGAGCGGTGTTTATGTTGCTCACCTCCGACTTT
TACCGCAACACAAAACGCGTCACCAGTGTGGGCCACAAGGGCAAGTTCGG
ACACGAGTTCATGGAGTTCGAGTTCTCCAGCAGCGGCAAGCTGAGGTACG
CCAACAACTCCAACTACAAAAACGACACGATGATCCGGAAGGAGGTGACG
GTGAGCCAGTCCGTGCTGGACGAGGTCCGTCGAATCATCCAGGAGGCGGA
CATCATTGCGTGAGTTTTGTACTGAAGCATACCATAGTTCTGTGTGGGTG
TTGCGGATGTCGTCGTCGTCGGTGGTCCTGGTGTTGCTCGCGCGTGTTCA
ACGACAGCAGCAGACGAGCATATCAACTGCGTACTGCTCTTGTTCGTGGT
GTTGTTACATGGGTGTCAGTGCTTGACGCTGTTGCTGTGCTTATGATGGT
GTTGGTAGGAGGTTGAATGATTGAATTCGCACTACGGGACGCCGCTAGTC
AACAGCGCGTCAATTTTCACAGCAAACACCCACAAGATGTGTGAGGGTTG
GTGTGGCATGGCAACCGTACTTCACCTTTCACCCGATCTCGAAATCCTCG
AGCGTGTGCTAGTCTCTTTCTACCGCCGGTAAAGCCCCCGCTAGCTTCCT
CAGAGCGGCACGTCAAGCGCTGTGCTTGGTTCACGCAGAATCACCGAGAG
GGACGAGACACGGAGACGCCTAGATATAAACAAAGAGAGCACCACTCCGC
CTAATTTTTTTTTTTTGTGTGTGTTGAAATTAATTGGTCGACCGCCGTCG
CGTTAACAACTACGCCGGGAGCAGGGAGGATGACCACAACTGGCCGGAGC
CCGACCGCGTAGGGAGGCAAGAGCTTGAGGTGAAGCTGGGCAAGGAGCAC
ATCTCCTTCACGGTAAGACAAAAGAAGGAACTGATGTTGGTGTGTTTTGA
TGCCCATGTAGGGCTCACAGGGAGGGAATAGACGGGGTTAGCGGTGTAGT
GCCGAAGTTTCCCCCCCGAGGCCTTCGTGTTACGGTCGTGAGATGCTCTG
TTCCGCTTAAGGCAGCTGAGTGGCGCCCCTTGTGCACCCCCCTCCCGCCT
GTGTCTCGCACGCCCGCCCTGTGTTTTCCTTCCTCTCGTGCCTTGTCGAT
CGTGTTGTCAGTGCTCCAAGATCGGGTCGCTGTTGGACGTGCAAGAGAGC
AATGACCCGGAAGGGTTGCGCATCTTCTACTACCTCATCCAGGACCTCAA
GTGCCTCGTATTTTCCCTCATCACTCTCCACTTCAAGGTACACGGGTTGA
AGCAGGCATCCAATCGGCATAAAGACGAACTGTTGTTCCTCTTTGAATCC
GTTGTGTCTTTGCTCTAG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10985:2248..4915-

>mRNA_Ecto-sp8_S_contig10985.1350.1 ID=mRNA_Ecto-sp8_S_contig10985.1350.1|Name=mRNA_Ecto-sp8_S_contig10985.1350.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=507bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10985:2248..4915- (Ectocarpus species8 EcLAC_412)
ATGGCAGACCAGTTCTACTGCCGTTACTATGTGGGCCACAAGGGCAAGTT
CGGACACGAGTTCATGGAGTTCGAGTTCTCCAGCAGCGGCAAGCTGAGGT
ACGCCAACAACTCCAACTACAAAAACGACACGATGATCCGGAAGGAGGTG
ACGGTGAGCCAGTCCGTGCTGGACGAGGTCCGTCGAATCATCCAGGAGGC
GGACATCATTGCGGAGGATGACCACAACTGGCCGGAGCCCGACCGCGTAG
GGAGGCAAGAGCTTGAGGTGAAGCTGGGCAAGGAGCACATCTCCTTCACG
TGCTCCAAGATCGGGTCGCTGTTGGACGTGCAAGAGAGCAATGACCCGGA
AGGGTTGCGCATCTTCTACTACCTCATCCAGGACCTCAAGTGCCTCGTAT
TTTCCCTCATCACTCTCCACTTCAAGGTACACGGGTTGAAGCAGGCATCC
AATCGGCATAAAGACGAACTGTTGTTCCTCTTTGAATCCGTTGTGTCTTT
GCTCTAG
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