mRNA_Ecto-sp8_S_contig10976.1342.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10976.1342.1 vs. uniprot
Match: D8LNS9_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNS9_ECTSI) HSP 1 Score: 235 bits (599), Expect = 4.500e-77 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1
Query: 1 MYTKANLAALRVKKDIAELSQHRLNATHASTSIDFPDGTRNLLKLKVGVSMTAGLFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPVLSINTV 342
MYTKANLAALRVKKDIAELSQHRLNATHASTSIDFPDGTRNLLKLKVGVSMTAGLFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPVLSINTV
Sbjct: 1 MYTKANLAALRVKKDIAELSQHRLNATHASTSIDFPDGTRNLLKLKVGVSMTAGLFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPVLSINTV 114
BLAST of mRNA_Ecto-sp8_S_contig10976.1342.1 vs. uniprot
Match: A0A7S2CGK4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGK4_9STRA) HSP 1 Score: 157 bits (398), Expect = 9.150e-46 Identity = 71/114 (62.28%), Postives = 90/114 (78.95%), Query Frame = 1
Query: 1 MYTKANLAALRVKKDIAELSQHRLNATHASTSIDFPDGTRNLLKLKVGVSMTAGLFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPVLSINTV 342
+YT+ANLAA R+KKDI EL+QHR + AST+++FPDG NLL ++V V MT+G + G +F F LTIPP+YPF+AP V CT+R WHPNI+ + G V LPIL+ DWRPVLSINTV
Sbjct: 25 LYTRANLAASRIKKDIQELAQHRFSCNSASTAVEFPDGNENLLNIQVTVIMTSGFYRGGSFIFRLTIPPTYPFYAPEVTCTTRVWHPNINPNNGRVDLPILSIDWRPVLSINTV 138
BLAST of mRNA_Ecto-sp8_S_contig10976.1342.1 vs. uniprot
Match: A0A3F2RJX4_9STRA (UBC core domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJX4_9STRA) HSP 1 Score: 134 bits (338), Expect = 3.660e-37 Identity = 61/116 (52.59%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 1 MYTKANLAALRVKKDIAELSQHRLNATHASTSIDFPDGTRNLLKLKVGVSMT--AGLFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPVLSINTV 342
MY +++ AALRV+KD+ ELS+ + + A T +DFPDG N+LK+ +S+ +G F F F + IP +YPFHAP V C +R WHPN+D+ TG V +PIL KDWRPVLSINTV
Sbjct: 1 MYMRSDFAALRVRKDVNELSKAKFTCSQAKTRVDFPDGAENMLKINFAISIADVSGPFANGDFTFFVEIPKTYPFHAPIVRCLTRVWHPNVDMTTGKVMMPILGKDWRPVLSINTV 116
BLAST of mRNA_Ecto-sp8_S_contig10976.1342.1 vs. uniprot
Match: G4Z9T7_PHYSP (UBC core domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4Z9T7_PHYSP) HSP 1 Score: 130 bits (328), Expect = 1.060e-35 Identity = 60/116 (51.72%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 1 MYTKANLAALRVKKDIAELSQHRLNATHASTSIDFPDGTRNLLKL--KVGVSMTAGLFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPVLSINTV 342
MY +++LAALRV+KD+ ELS+ + A+T +DFPDG N+L+L + ++ +G F F F + IP +YPFH P+V C +R WHPNID+ TG V +PIL DWRPVLSINTV
Sbjct: 1 MYMRSDLAALRVRKDVNELSKAKFTCNQATTRVDFPDGADNMLRLIFTISIADVSGPFANGDFTFFVEIPKTYPFHPPSVKCLTRVWHPNIDMATGKVMMPILGTDWRPVLSINTV 116
BLAST of mRNA_Ecto-sp8_S_contig10976.1342.1 vs. uniprot
Match: A0A329RS56_9STRA (UBC core domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329RS56_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.490e-35 Identity = 61/116 (52.59%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 1 MYTKANLAALRVKKDIAELSQHRLNATHASTSIDFPDGTRNLLKLKVGVSMT--AGLFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPVLSINTV 342
MY +++ AALRV+KD+ EL++ + A T ++FPDG N+L+L +S+ +G F F F + IP +YPFHAP+V C SR WHPNID+ TG V +PIL KDWRPVLSINTV
Sbjct: 1 MYMRSDFAALRVRKDVNELAKAKFTCAQARTRVEFPDGANNMLQLIFTISIIDLSGPFANGDFTFFVDIPKTYPFHAPSVRCLSRVWHPNIDIATGKVMMPILGKDWRPVLSINTV 116
BLAST of mRNA_Ecto-sp8_S_contig10976.1342.1 vs. uniprot
Match: A0A7S2S1V2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1V2_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.070e-34 Identity = 62/111 (55.86%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 10 KANLAALRVKKDIAELSQHRLNATHASTSIDFPDGTRNLLKLKVGVSMTAGLFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPVLSINTV 342
+ NLA RV+KD+ EL+ RL+ ASTS++ P+G ++L + V VSM GL+ G +F F + IPPSYPFHAP VVC +R HPNIDL TG V LP+L +DWRPVL++NTV
Sbjct: 38 RPNLATHRVQKDVQELTLQRLSCASASTSVELPNGCKDLSLVVVTVSMLGGLYRGGSFTFHILIPPSYPFHAPNVVCMTRVLHPNIDLETGQVLLPLLVEDWRPVLNLNTV 148
BLAST of mRNA_Ecto-sp8_S_contig10976.1342.1 vs. uniprot
Match: A0A484E8K9_BRELC (UBC core domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8K9_BRELC) HSP 1 Score: 128 bits (321), Expect = 1.190e-34 Identity = 59/116 (50.86%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 1 MYTKANLAALRVKKDIAELSQHRLNATHASTSIDFPDGTRNLLKLKVGVSMT--AGLFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPVLSINTV 342
MY +++ AALRV+KD+ EL++ + A T ++FPDG N+L+L +S+ +G F F F++ IP +YPFHAP V C +R WHPNID+ TG V +PI+ KDWRPVLSINTV
Sbjct: 1 MYMRSDFAALRVRKDVNELAKAKFTCAQARTRVEFPDGANNMLQLIFTISIIDLSGPFANGDFTFLVDIPKTYPFHAPGVRCLTRVWHPNIDITTGKVMMPIIGKDWRPVLSINTV 116
BLAST of mRNA_Ecto-sp8_S_contig10976.1342.1 vs. uniprot
Match: K3WPB1_GLOUD (UBC core domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPB1_GLOUD) HSP 1 Score: 127 bits (320), Expect = 1.300e-34 Identity = 59/116 (50.86%), Postives = 79/116 (68.10%), Query Frame = 1
Query: 1 MYTKANLAALRVKKDIAELSQHRLNATHASTSIDFPDGTRNLLKL--KVGVSMTAGLFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPVLSINTV 342
M +++ AALRV+KD+ ELS+ + A T +DFPDG N+LKL + ++ AG + F F + IP +YPFHAP+V C ++ WHPNID TG V +PI+ KDWRPVLSINTV
Sbjct: 1 MNMRSDFAALRVRKDVNELSKAKFTCHQAKTRVDFPDGANNMLKLIFTISIADVAGPYANGDFTFFVEIPKTYPFHAPSVTCLTKVWHPNIDPTTGKVMMPIIGKDWRPVLSINTV 116
BLAST of mRNA_Ecto-sp8_S_contig10976.1342.1 vs. uniprot
Match: A0A7S2S2N1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2N1_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.470e-34 Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 10 KANLAALRVKKDIAELSQHRLNATHASTSIDFPDGTRNLLKLKVGVSMTAGLFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPV 324
+ NLA RV+KD+ EL+ RL+ ASTS++ P+G ++L + V VSM GL+ G +F F + IPPSYPFHAP VVC +R HPNIDL TG V LP+L +DWRPV
Sbjct: 38 RPNLATHRVQKDVQELTLQRLSCASASTSVELPNGCKDLSLVVVTVSMLGGLYRGGSFTFHILIPPSYPFHAPNVVCMTRVLHPNIDLETGQVLLPLLVEDWRPV 142
BLAST of mRNA_Ecto-sp8_S_contig10976.1342.1 vs. uniprot
Match: H3GWZ8_PHYRM (UBC core domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWZ8_PHYRM) HSP 1 Score: 132 bits (331), Expect = 2.770e-34 Identity = 59/116 (50.86%), Postives = 82/116 (70.69%), Query Frame = 1
Query: 1 MYTKANLAALRVKKDIAELSQHRLNATHASTSIDFPDGTRNLLKL--KVGVSMTAGLFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPVLSINTV 342
MY +++ AALRV+KD+ ELS+ + + A T +DFPDG N+L+L + ++ +G F F F + IP +YPFHAP+V C +R WHPN+D+ TG V +PI+ KDWRPVLSINTV
Sbjct: 1 MYMRSDFAALRVRKDVNELSKAKFTCSQAKTRVDFPDGADNMLRLIFTISIADVSGPFANGDFTFFVEIPKTYPFHAPSVRCLTRVWHPNVDMATGKVMMPIIGKDWRPVLSINTV 116 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10976.1342.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10976.1342.1 >prot_Ecto-sp8_S_contig10976.1342.1 ID=prot_Ecto-sp8_S_contig10976.1342.1|Name=mRNA_Ecto-sp8_S_contig10976.1342.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=114bp MYTKANLAALRVKKDIAELSQHRLNATHASTSIDFPDGTRNLLKLKVGVSback to top mRNA from alignment at Ecto-sp8_S_contig10976:3804..6642+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10976.1342.1 ID=mRNA_Ecto-sp8_S_contig10976.1342.1|Name=mRNA_Ecto-sp8_S_contig10976.1342.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2839bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10976:3804..6642+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10976:3804..6642+ >mRNA_Ecto-sp8_S_contig10976.1342.1 ID=mRNA_Ecto-sp8_S_contig10976.1342.1|Name=mRNA_Ecto-sp8_S_contig10976.1342.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=342bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10976:3804..6642+ (Ectocarpus species8 EcLAC_412)back to top |