mRNA_Ecto-sp8_S_contig1097.1339.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1097.1339.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 292 bits (747), Expect = 3.920e-88 Identity = 151/242 (62.40%), Postives = 180/242 (74.38%), Query Frame = 2
Query: 269 DAKSVMEGDAGWGSAGVDEWGSVVASRDATKLAEVVLFWYGSKPERALSVVRDCVCLLEKEAAFSARACPAVPSPPTTPEPTRSSCLDALVVALNETCDGKSWYTSTKELQLASLEFCIACRNHQTVRMNVDERIPRRLLAAADAPPPHPKRLCRTRVPRLRARRVTWNMRTAAELRNPMFALNDADCLEFGNAFDDSLEGVVWPTRLETLEFYRHSPFDNPVDLVELPLSLQRLRFGRSFN 994
D +VMEGD G GSA D+WG VA+ DATKLAE+VL W GS+PE ALS++R+CV LLE+EAAFS + SP T PTRSSCL L VALNETCDGKSWYTSTKELQLASLE C+ACR++QT+ + VD PRRLLAAADAP PHPKRLC TRVPRLRARR TWN+ TA+ +R +FA D D LEFG AF SL+ +VWP RL+T+EF + SP + +D V P SL+++ G FN
Sbjct: 51 DTYTVMEGDVGSGSASPDKWGLAVATGDATKLAELVLVWSGSRPEAALSLLRECVLLLEEEAAFSVPDSSPLQSPSCTLGPTRSSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPLNRLLDGVSWPASLRKVCLGHDFN 292
BLAST of mRNA_Ecto-sp8_S_contig1097.1339.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI) HSP 1 Score: 248 bits (633), Expect = 2.170e-73 Identity = 127/182 (69.78%), Postives = 151/182 (82.97%), Query Frame = 2
Query: 347 RDATKLAEVVLFWYGSKPERALSVVRDCVCLLEKEAAFSARACPAVPSPPTTPEPTRSSCLDALVVALNETCDGKSWYTSTKELQLASLEFCIACRNHQTVRMNVDERIPRRLLAAADAPPPHPKRLCRTRVPRLRARRVTWNMRTAAELRNPMFALNDADCLEFGNAFDDSLEGV-VWPTR 889
R AT+LA++VL W GS+PE ALS+++DCV LLEKE AFSA A PAVP PT P P+RSSCL+ALV+ALNETC+G+SWYTSTKELQLASLEFC+ACRN+QT+ + VD +IPRRLLA ADAPPPHP+ LCRTRVPRLRARRVTW MR AAEL P+FA+ D DCL+FG + SLE + +W R
Sbjct: 54 RAATRLAQLVLVWSGSEPEPALSILKDCVSLLEKEFAFSAPAFPAVPLLPTMPGPSRSSCLNALVIALNETCNGESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRLLARADAPPPHPELLCRTRVPRLRARRVTWGMRKAAELSIPIFAMTDVDCLKFG---ETSLEALRLWHGR 232
BLAST of mRNA_Ecto-sp8_S_contig1097.1339.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 243 bits (620), Expect = 3.720e-71 Identity = 117/162 (72.22%), Postives = 135/162 (83.33%), Query Frame = 2
Query: 509 PTRSSCLDALVVALNETCDGKSWYTSTKELQLASLEFCIACRNHQTVRMNVDERIPRRLLAAADAPPPHPKRLCRTRVPRLRARRVTWNMRTAAELRNPMFALNDADCLEFGNAFDDSLEGVVWPTRLETLEFYRHSPFDNPVDLVELPLSLQRLRFGRSFN 994
PTR CL+AL+VALNETCDGKSWYTSTKELQLASL+FCIACRN QTV +NVDE+IPRRLLA+ADAPPPHPKRLC TRVPRLR+RRVTWNM TAA+LR P+FA+ D + LEFG+AF DSLE V WP L T+EF+ SPFD ++LV+ P LQ + FG FN
Sbjct: 46 PTRKFCLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQNVTFGGDFN 207
BLAST of mRNA_Ecto-sp8_S_contig1097.1339.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI) HSP 1 Score: 226 bits (576), Expect = 1.800e-67 Identity = 109/160 (68.12%), Postives = 125/160 (78.12%), Query Frame = 2
Query: 512 TRSSCLDALVVALNETCDGKSWYTSTKELQLASLEFCIACRNHQTVRMNVDERIPRRLLAAADAPPPHPKRLCRTRVPRLRARRVTWNMRTAAELRNPMFALNDADCLEFGNAFDDSLEGVVWPTRLETLEFYRHSPFDNPVDLVELPLSLQRLRFGRSF 991
T + CL +L+VALNETCDG SWYTSTKELQ ASLEFCIACRN+ + + VD +IPR LLAAADAPPPHPKRLC TRVPRLRAR VTWNMR AAEL NP+FA+ D DCLEFG FD SLE V WP RL+ +EF SPF+ P++L++ P SLQ L G F
Sbjct: 10 THNPCLSSLIVALNETCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEFLYTSPFNQPLELIKWPESLQHLVLGGDF 169
BLAST of mRNA_Ecto-sp8_S_contig1097.1339.1 vs. uniprot
Match: D7FUL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL5_ECTSI) HSP 1 Score: 226 bits (575), Expect = 5.870e-66 Identity = 139/251 (55.38%), Postives = 162/251 (64.54%), Query Frame = 2
Query: 254 GLNSSDAKSVMEGDAGWGSAGVDEW---GSVVASRDATKLAEVVLFWYGSKPERALSVVRDCVCLLEKEAAFSARACPAVPSPPTTPEPTRSSCLDALVVALNETCDGKSWYTSTKELQLASLEFCIACRNHQTVRMNVDERIPRRLLAAADAPPPHPKR-LCRTRVPRLRAR-RVTWNMRTAAELRNPMFALNDADCLEFGNAFDDSLEGVVWPTRLETLEFYRHSPFDNPVDLVELPLSLQRLRFGRSF 991
GLN+SD + VM G +G W GS VAS ATKLAE+VL W SKPERALS+ R CV LLEKE A SA + T P P RSSCL+A+VVAL+ETCDGKSWYTSTKELQLASL FC ACRNHQTV + VDE IPRRLLAAADAPPP + + TR P A V + E +FA+ D D LEFG F+ +LE V WP L+T++ + S F P+DL+E P SLQ L FG F
Sbjct: 45 GLNTSDKQRVMGGRRRFGVR--KAWRRRGSAVASGAATKLAELVLVWSVSKPERALSIARTCVSLLEKEDAHSASGSSPLXXXSTAPGPGRSSCLNAIVVALSETCDGKSWYTSTKELQLASLGFCTACRNHQTVHLKVDEHIPRRLLAAADAPPPASEAAVSDTRAPTHSASCDVEHADSSGIEEPCTVFAMTDVDHLEFGWDFEGNLEAVAWPRWLKTIDLHPWSNFGKPIDLIEWPDSLQTLEFGWEF 293
BLAST of mRNA_Ecto-sp8_S_contig1097.1339.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE) HSP 1 Score: 216 bits (549), Expect = 1.220e-61 Identity = 111/171 (64.91%), Postives = 130/171 (76.02%), Query Frame = 2
Query: 509 PTRSSCLDALVVALNETCDGKSWYTSTKELQLASLEFCIACRNHQTVRMNVDERIPRRLLAAADAPPPHPKRLCRTRVPRLRARRVTWNMRTAAELRNPMFALNDADCLEFGNAFDDSLEGVVWPTRLETLE---------FYRHSPFDNPVDLVELPLSLQRLRFGRSFN 994
P R SCL+A++VALNET DGKSWYTSTKE QLASLEFCIACRNHQT+ + VD R PRRLLAAADAPPPHPKRLC TRVPRLRARRVTW++ TAA LRN ++++ DAD LEF AF+DSLE V WP RL+T+E F+ S FD P+ V P +L++L FG N
Sbjct: 7 PARDSCLNAIIVALNETSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPRRLKTVEVSGIAEVAKFHDKSLFDQPIAGVVWPDTLEQLTFGLFLN 177
BLAST of mRNA_Ecto-sp8_S_contig1097.1339.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE) HSP 1 Score: 218 bits (555), Expect = 2.520e-59 Identity = 108/158 (68.35%), Postives = 129/158 (81.65%), Query Frame = 2
Query: 500 TPEPTRSSCLDALVVALNETCDGKSWYTSTKELQLASLEFCIACRNHQTVRMNVDERIPRRLLAAADAPPPHPKRLCRTRVPRLRARRVTWNMRTAAELRNPMFALNDADCLEFGNAFDDSLEGVVWPTRLETLEFYRHSPFDNPVDLVELPLSLQRL 973
+P PT ++CL+A+ VAL ET DGKSWYTSTKELQLASLEFC+ACR +QT+ + VD RIPR LLAAAD PP HPKRL R RVPRLRAR VTWNM TAAELR+P+FAL D D L+FG+AF+ SLE V WP RLE++ F+ SPF+ P+DLV+ P SL+RL
Sbjct: 28 SPGPTSNTCLNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAFHNFSPFNTPIDLVKWPASLKRL 185
BLAST of mRNA_Ecto-sp8_S_contig1097.1339.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE) HSP 1 Score: 179 bits (455), Expect = 2.460e-47 Identity = 90/139 (64.75%), Postives = 105/139 (75.54%), Query Frame = 2
Query: 560 CDGKSWYTSTKELQLASLEFCIACRNHQTVRMNVDERIPRRLLAAADAPPPHPKRLCRTRVPRLRARRVTWNMRTAAELRNPMFALNDADCLEFGNAFDDSLEGVVWPTRLETLEFYRHSPFDNPVDLVELPLSLQRLR 976
CDGK WYTSTKELQ ASLEFCIACR +QT+R+ VD + PR LLAA DAP PH KR CRTRVPRLRARRV WNM TA EL++P+FAL D L+FG AF+ SLE V WP RL+ ++F S F+ P++ VE P SL LR
Sbjct: 2 CDGKRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAAVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSPIFALKDVVRLDFGPAFEGSLESVAWPQRLKEIDFSWGSLFNQPIEGVEFPPSLLELR 140
BLAST of mRNA_Ecto-sp8_S_contig1097.1339.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE) HSP 1 Score: 180 bits (456), Expect = 1.980e-46 Identity = 93/152 (61.18%), Postives = 107/152 (70.39%), Query Frame = 2
Query: 518 SSCLDALVVALNETCDGKSWYTSTKELQLASLEFCIACRNHQTVRMNVDERIPRRLLAAADAPPPHPKRLCRTRVPRLRARRVTWNMRTAAELRNPMFALNDADCLEFGNAFDDSLEGVVWPTRLETLEFYRHSPFDNPVDLVELPLSLQRL 973
SS L++ALNE CDGK WYTSTKELQLASLEFC+ACR +Q + + VD + PR LLAA DAPPPH KR CRTRVPRLRARRV WNM TA ELR MFAL D +CL FG F+ SLE VVWP L+ + F+ S F+ SLQ+L
Sbjct: 15 SSGSKDLILALNEMCDGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQIIFFS-SEFNQXXXXXXXXASLQKL 165
BLAST of mRNA_Ecto-sp8_S_contig1097.1339.1 vs. uniprot
Match: D7FTA7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA7_ECTSI) HSP 1 Score: 112 bits (280), Expect = 9.300e-26 Identity = 62/120 (51.67%), Postives = 75/120 (62.50%), Query Frame = 1
Query: 427 LRLFAGEGGCVFGSGLSGCPFSSDYA*TNS*LMLGRPRRCFERDVRREELVHVDQGAAAGVIGVLHRV*KPSDRAHERR*THSTSAVGCCRCPTTTPEAAVPDPRATAKSAPRNVEHADS 786
+ L GEGGCVF S F+ T++ L+L P C ER VRREELVH++ AAAG++G LH V PSD A + R TH+T A CC CP PEA V D RA A+SA R+VEH DS
Sbjct: 1 MCLIVGEGGCVFSSRFFFPSFALLCPWTHAQLVLEGPHGCLERGVRREELVHINHRAAAGILGALHGVKTPSDVALDSRRTHATQAARCCGCPLPGPEATVWDTRAAAESASRDVEHPDS 120 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1097.1339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1097.1339.1 >prot_Ecto-sp8_S_contig1097.1339.1 ID=prot_Ecto-sp8_S_contig1097.1339.1|Name=mRNA_Ecto-sp8_S_contig1097.1339.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=456bp MDGYACSGSVWPADEGGSAVRSGDVTKLAELVLVWSGSKPERALSVVKDCback to top mRNA from alignment at Ecto-sp8_S_contig1097:7018..16711- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1097.1339.1 ID=mRNA_Ecto-sp8_S_contig1097.1339.1|Name=mRNA_Ecto-sp8_S_contig1097.1339.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=9694bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1097:7018..16711- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1097:7018..16711- >mRNA_Ecto-sp8_S_contig1097.1339.1 ID=mRNA_Ecto-sp8_S_contig1097.1339.1|Name=mRNA_Ecto-sp8_S_contig1097.1339.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1368bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1097:7018..16711- (Ectocarpus species8 EcLAC_412)back to top |