mRNA_Ecto-sp8_S_contig10945.1322.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10945.1322.1 vs. uniprot
Match: A0A6H5KUS9_9PHAE (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUS9_9PHAE) HSP 1 Score: 380 bits (975), Expect = 2.210e-122 Identity = 184/187 (98.40%), Postives = 185/187 (98.93%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPR-SMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHD 558
QRIFFRGGELRNPHTLQD GIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPR +MQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHD
Sbjct: 62 QRIFFRGGELRNPHTLQDYGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPREAMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHD 248
BLAST of mRNA_Ecto-sp8_S_contig10945.1322.1 vs. uniprot
Match: A0A7S3UXN5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXN5_HETAK) HSP 1 Score: 188 bits (477), Expect = 2.420e-55 Identity = 100/190 (52.63%), Postives = 123/190 (64.74%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPRSMQ----GGLGGGTVSMRPGIGAGESYVREVAAYILDDR--NLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVR 552
QR+F+RG ELRN HTL CG++RD QTV LA +P+ P PR L+R L Q +R L+ PEL +EGTGGTYFL+DA ++ + FKP DEEPF PNNPR + GG GG +SMRPG+ AGE+Y+REVAAY+LD L GVP T L A+H AF Y D + R K+GSFQ FVR
Sbjct: 62 QRLFYRGRELRNAHTLATCGLFRDRQTVVLAVAPEPGDALLPLARPLNE--NCPRDLARTLTQAQRALELNIVPELAMEGTGGTYFLKDARKRPLGAFKPGDEEPFMPNNPRGFEPGSAGGAGGEALSMRPGVRAGEAYLREVAAYLLDQSWGGLAGVPATALALAQHSAFRYADGRVRPKVGSFQAFVR 249
BLAST of mRNA_Ecto-sp8_S_contig10945.1322.1 vs. uniprot
Match: A0A7S2H589_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H589_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.450e-51 Identity = 94/189 (49.74%), Postives = 123/189 (65.08%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPRSMQGGLGGGTVS------MRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFV 549
QR+F+RG ELRN H+LQDCGIY++G+T+ L+ P + LE + G + P+SLSR + Q KR + +G P L ++G GGTYF+ ++ + VA FKP+DEEPF NNPR G T S MR GI G++Y+REVAAYILD R+ GVP TTLVE ++ FCY D + KLGSFQ FV
Sbjct: 56 QRLFYRGRELRNQHSLQDCGIYQNGETLTLSVRPNTLHNLNFYLETY-GTFKCPKSLSRAIIQSKRAMHKGLTPSLAMDGAGGTYFIPNSMGKYVACFKPRDEEPFTINNPRGQA--WSGVTSSDQEELTMRKGIRPGDAYIREVAAYILDTRSFTGVPETTLVECENAKFCYNDKRPVPKLGSFQAFV 241
BLAST of mRNA_Ecto-sp8_S_contig10945.1322.1 vs. uniprot
Match: A0A4D9DDH3_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDH3_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.180e-45 Identity = 96/199 (48.24%), Postives = 121/199 (60.80%), Query Frame = 1
Query: 40 HTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELP--RSLSRVLGQVKRGLDRGFK-PELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPRSMQ--------GGLGGG-----TVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYW---------DHKERK-KLGSFQEFVRHD 558
H+LQDCGI RDG+T+Y +P + + ++ G LP R L R L QV+R +D G P+LT+EG GGTYFL D R+ +AVFKP DEEP+AP NPR + GG GGG MRPG+ GE YVREVAAY+LD GVP T +V+A+HPAF Y+ D +E K+GSFQE+VRHD
Sbjct: 170 HSLQDCGIVRDGETIYFTIAPPSSLDRDRAVPILRPYGLLPPPRRLGRALKQVRRAMDMGVNGPKLTVEGFGGTYFLYDPRRRPLAVFKPSDEEPYAPRNPRGPELVADWGKVGGGGGGKGRVEVFQMRPGVTPGEGYVREVAAYLLDHEGFAGVPETIMVQARHPAFHYFPSSVSSGGNDGQEGSVKVGSFQEYVRHD 368
BLAST of mRNA_Ecto-sp8_S_contig10945.1322.1 vs. uniprot
Match: W7TCJ9_9STRA (Phosphatidylinositol 3-/4-kinase, catalytic domain protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCJ9_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.860e-45 Identity = 96/199 (48.24%), Postives = 121/199 (60.80%), Query Frame = 1
Query: 40 HTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELP--RSLSRVLGQVKRGLDRGFK-PELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPRSMQ--------GGLGG--GTVS---MRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYW---------DHKERK-KLGSFQEFVRHD 558
H+LQDCGI RDG+T+Y +P + + ++ G LP R L R L QV+R +D G P+LT+EG GGTYFL D R+ +AVFKP DEEP+AP NPR + GG GG G V MRPG+ GE YVREVAA++LD GVP T +V+A+HPAF Y D +E K+GSFQE+VRHD
Sbjct: 170 HSLQDCGIVRDGETIYFTIAPPSSLDRDRAVPILRPYGLLPPPRRLGRALKQVRRAMDMGVNGPKLTVEGFGGTYFLYDPRRRPLAVFKPSDEEPYAPRNPRGPELVADWGKVGGRGGDKGRVEVFQMRPGVTPGEGYVREVAAFLLDHEGFAGVPETIMVQARHPAFHYLPSSVCSGGNDGQEGSVKVGSFQEYVRHD 368
BLAST of mRNA_Ecto-sp8_S_contig10945.1322.1 vs. uniprot
Match: A0A1V9YQN6_9STRA (Phosphatidylinositol kinase (PIK-F) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQN6_9STRA) HSP 1 Score: 164 bits (414), Expect = 4.020e-44 Identity = 85/188 (45.21%), Postives = 118/188 (62.77%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYL--ASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPRSMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHD 558
Q++F++G EL N L CGIY+D V+L +++ + + Y++ P+ G P+++ + +GL G PEL ++GTGGTYFL+D ++KV FKPQ+EEPFAP NPR LG R G+ +GE+ REVAAY+LD + GVP TTL E KHPAF Y + + K+GS QEFVRHD
Sbjct: 126 QQLFYKGTELSNVRNLVQCGIYQDKVVVHLVLSANARKKRANMYTIHPY-GNHVFPKTIMKAAHLAMQGLALGLVPELAMDGTGGTYFLKDPTQRKVCCFKPQNEEPFAPMNPRGFVAALG--ESGFRKGVLSGEACEREVAAYLLDKDHFAGVPATTLTEIKHPAFRYGEGEVVYKMGSLQEFVRHD 310
BLAST of mRNA_Ecto-sp8_S_contig10945.1322.1 vs. uniprot
Match: T0QV05_SAPDV (Ubiquitin-like domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QV05_SAPDV) HSP 1 Score: 162 bits (410), Expect = 1.200e-43 Identity = 84/188 (44.68%), Postives = 117/188 (62.23%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYL--ASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPRSMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHD 558
Q+++F+G EL N L CGIY+D V+L +++ + + +++ P+ G P+++ + +GL G PEL ++GTGGTYFL+D ++KV FKPQ+EEPFAP NPR LG R G+ +GE+ REVAAY LD + GVP TTL E KHPAF Y + + K+GS QEFVRHD
Sbjct: 114 QQLYFKGTELNNVRNLMQCGIYQDKVVVHLVVSANARKKQKNVFTIHPY-GNHVFPKTIMKAAHLAMQGLALGLVPELAMDGTGGTYFLKDPTQRKVCCFKPQNEEPFAPMNPRGFVAALG--ESGFRKGVLSGEACEREVAAYFLDKDHFAGVPATTLTEIKHPAFRYGEAEVVYKMGSLQEFVRHD 298
BLAST of mRNA_Ecto-sp8_S_contig10945.1322.1 vs. uniprot
Match: W4GT12_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GT12_9STRA) HSP 1 Score: 158 bits (399), Expect = 6.170e-43 Identity = 85/189 (44.97%), Postives = 113/189 (59.79%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKP--YSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPRSMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERK-KLGSFQEFVRHD 558
Q+++++G EL NP L CG+Y D V L S + +++ P+ G PRS+ + +GL GF PEL ++GTGGTYFL+D A++K+ FKPQ+EEPF P NPR G LG R G+ +GE+ REVAA++LD + VP TTL E KHPAF D K+GS QEFVRHD
Sbjct: 74 QQLYYKGTELANPRNLVQCGLYADKVVVDLVLSANGRQNRANMFTIHPY-GNHVFPRSIMKAAHLAMQGLALGFTPELAMDGTGGTYFLKDPAQRKIVCFKPQNEEPFGPCNPRGFVGSLG--EAGFRKGVLSGEACEREVAAFLLDKDHFASVPATTLAEIKHPAFKNSDSGNVVYKMGSLQEFVRHD 259
BLAST of mRNA_Ecto-sp8_S_contig10945.1322.1 vs. uniprot
Match: A0A1V9ZYF3_9STRA (Phosphatidylinositol kinase (PIK-F) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYF3_9STRA) HSP 1 Score: 160 bits (405), Expect = 3.590e-42 Identity = 86/188 (45.74%), Postives = 118/188 (62.77%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYL--ASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPRSMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHD 558
Q++F++G EL N L CGIY+D V+L +++ + + Y++ P+ G P+++ + + +GL GF PEL ++GTGGTYFL+D ++KV FKPQDEEPFAP NPR G G R + +GE+ REVAAY+LD + GVP TTL E KHPAF Y + K+GS QEFVRHD
Sbjct: 542 QQLFYKGSELNNVRNLVQCGIYQDKVVVHLVLSANARKKHNNLYTIHPY-GNHMFPKTIMKAVHLAMQGLAMGFAPELAMDGTGGTYFLKDPTQRKVCCFKPQDEEPFAPMNPRGFVGDALG-VPGFRKYVLSGEACEREVAAYLLDKDHFAGVPTTTLTEIKHPAFRYKG-EVVYKMGSLQEFVRHD 726
BLAST of mRNA_Ecto-sp8_S_contig10945.1322.1 vs. uniprot
Match: W4GQZ4_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GQZ4_9STRA) HSP 1 Score: 158 bits (399), Expect = 4.110e-42 Identity = 85/189 (44.97%), Postives = 113/189 (59.79%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKP--YSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPRSMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERK-KLGSFQEFVRHD 558
Q+++++G EL NP L CG+Y D V L S + +++ P+ G PRS+ + +GL GF PEL ++GTGGTYFL+D A++K+ FKPQ+EEPF P NPR G LG R G+ +GE+ REVAA++LD + VP TTL E KHPAF D K+GS QEFVRHD
Sbjct: 74 QQLYYKGTELANPRNLVQCGLYADKVVVDLVLSANGRQNRANMFTIHPY-GNHVFPRSIMKAAHLAMQGLALGFTPELAMDGTGGTYFLKDPAQRKIVCFKPQNEEPFGPCNPRGFVGSLG--EAGFRKGVLSGEACEREVAAFLLDKDHFASVPATTLAEIKHPAFKNSDSGNVVYKMGSLQEFVRHD 259 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10945.1322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10945.1322.1 >prot_Ecto-sp8_S_contig10945.1322.1 ID=prot_Ecto-sp8_S_contig10945.1322.1|Name=mRNA_Ecto-sp8_S_contig10945.1322.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=186bp QRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAback to top mRNA from alignment at Ecto-sp8_S_contig10945:4740..6373+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10945.1322.1 ID=mRNA_Ecto-sp8_S_contig10945.1322.1|Name=mRNA_Ecto-sp8_S_contig10945.1322.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1634bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10945:4740..6373+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10945:4740..6373+ >mRNA_Ecto-sp8_S_contig10945.1322.1 ID=mRNA_Ecto-sp8_S_contig10945.1322.1|Name=mRNA_Ecto-sp8_S_contig10945.1322.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=558bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10945:4740..6373+ (Ectocarpus species8 EcLAC_412)back to top |