mRNA_Ecto-sp8_S_contig109.1272.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig109.1272.1
Unique NamemRNA_Ecto-sp8_S_contig109.1272.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: D7G364_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G364_ECTSI)

HSP 1 Score: 540 bits (1391), Expect = 1.470e-192
Identity = 271/286 (94.76%), Postives = 279/286 (97.55%), Query Frame = 1
Query:    1 MQCVGTSGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKRPSSEEEHDCRQEESEASMRLLEEGDRDASCMGQRLSSSLE 858
            MQCVG+SGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKK+YSVREYLCVALIT G+VIFNLA+ SNNEQDK+NS YGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQW+KG+LFCADNPLV GYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGH ISLKQWGGVAMVFVGIGFYMHGKHKRPSSEEEHDC QEESEASMRLLEEGDRDASC+GQRLSSS E
Sbjct:   63 MQCVGSSGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITTGIVIFNLAERSNNEQDKRNSMYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWMKGSLFCADNPLVTGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHSISLKQWGGVAMVFVGIGFYMHGKHKRPSSEEEHDCCQEESEASMRLLEEGDRDASCIGQRLSSSPE 348          
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: A0A6H5JQ56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ56_9PHAE)

HSP 1 Score: 414 bits (1064), Expect = 1.690e-144
Identity = 210/237 (88.61%), Postives = 218/237 (91.98%), Query Frame = 1
Query:  148 MIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKRPSSEEEHDCRQEESEASMRLLEEGDRDASCMGQRLSSSLE 858
            MIPVMLFGVLFAKK+YSVREYLCVALITMG+VIFNLAKGS  E+DKQNSTYGL LLV SLIFDGVMTSSQERLK ICKPT YEMMFYTNAWALGFLSAAAFASGQWVKG+LFCADNPLVMGYVVAFSL AACGQFFIYYTITTF+PLACATITTTRKFFTIVFSVITFGH ISLKQWGGVAMVFVGIGFYMHGKHKRP  E  HD R +ESEASMRLLEEGD DAS + +R  SSLE
Sbjct:    1 MIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLSLLVTSLIFDGVMTSSQERLKTICKPTAYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLTAACGQFFIYYTITTFSPLACATITTTRKFFTIVFSVITFGHSISLKQWGGVAMVFVGIGFYMHGKHKRPRDEGGHDLRHDESEASMRLLEEGDCDASFIDRRPPSSLE 237          
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: D7G358_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G358_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 3.100e-118
Identity = 176/242 (72.73%), Postives = 200/242 (82.64%), Query Frame = 1
Query:   13 GTSGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
            G SG+KMP  LFG  G AYIGAM+ SIEAL+YVNFPTKELGKSCKMIPVMLFGVLFAKK+YS++EYLCVALIT+G+V FNL+   +N++DK+NSTYGL LL  SLI DGV  S+QERLKA CKPTV+EMMF+ NAWAL  LSAAA+ SGQ V+G  FC+ NP VM YV+ FSLAAA GQ FIYYTI+ FNPL C TITTTRKFFTIV SVI FGH I  KQWGGVAMVF GIG+ M GK++R
Sbjct:   85 GRSGDKMPHHLFGTAGFAYIGAMVCSIEALKYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSLQEYLCVALITVGIVTFNLSGKPHNKEDKENSTYGLGLLAFSLILDGVTGSAQERLKAACKPTVHEMMFFMNAWALAILSAAAYLSGQAVEGYAFCSANPSVMSYVLGFSLAAAFGQNFIYYTISNFNPLVCTTITTTRKFFTIVCSVIIFGHAIGPKQWGGVAMVFTGIGYEMRGKYQR 326          
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: A0A835ZCP5_9STRA (UAA transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCP5_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.370e-86
Identity = 140/243 (57.61%), Postives = 176/243 (72.43%), Query Frame = 1
Query:   19 SGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKRPSS 747
            SGE +P +LF + G+ YI AMI S+E+L Y+NFPTKELGKSCKMIPVMLFGV+FA KRYSVR+Y+ VALIT G+V FNLA    ++  ++NSTYGL LL  SL+ DGV  S+Q+ +K   K TV+EMMF+ NAWAL  L+  A  +GQ   G  FC +NP V+  +  F+L AA GQ FIY+TI+ F+ L C TITTTRKFFTI+FSV+ FGH +S KQW GVAMVF  +   M  KH++  S
Sbjct:  100 SGEAIPHKLFSMAGAGYISAMICSLESLNYINFPTKELGKSCKMIPVMLFGVVFAGKRYSVRDYVGVALITAGIVTFNLA--GKHKSGRENSTYGLALLFMSLVLDGVTGSTQDNIKRAHKHTVHEMMFWMNAWALVVLTPMAVLTGQAAGGYAFCQENPAVLRDLFGFALTAALGQNFIYFTISHFSSLVCTTITTTRKFFTILFSVLFFGHPMSPKQWAGVAMVFTALIDNMWSKHQKNQS 340          
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: A0A2D4BZF8_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZF8_PYTIN)

HSP 1 Score: 254 bits (648), Expect = 6.870e-80
Identity = 119/236 (50.42%), Postives = 166/236 (70.34%), Query Frame = 1
Query:   31 MPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
            MP + F +T SAY+GAM+ S EAL++V++PT+ LGKSCKMIPVML GVL  +K+Y++R+Y+CV LIT G+ +F L K S+    ++NSTYGL LL  SL  DG+    QE +    +PTV++ MFYTN WA+ +  A A  +GQ V G  FC +NP ++  V  FS+ +A GQ FIY+TI  F+ L C TITTTRKFFTI+FSV+ +GH ++   W GVA+VF G+G+ +  K+++
Sbjct:   92 MPLKPFAVTSSAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVLLITTGIAVFQLGKASSKHASQENSTYGLLLLFTSLTLDGISGPKQEEISQTLRPTVHQQMFYTNLWAVLYTGAGALVTGQAVSGFQFCVENPAILNSVFYFSICSAXGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHSLTAMSWIGVAIVFTGLGWELSSKYQK 327          
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: A0A5D6XRA2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA2_9STRA)

HSP 1 Score: 253 bits (646), Expect = 7.900e-80
Identity = 122/237 (51.48%), Postives = 163/237 (68.78%), Query Frame = 1
Query:   28 KMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
            +MP Q F  T  AY+GAM+ S EAL++V++PT+ LGKSCKMIPVML GVL  +K+YS REY CV LIT G+ +F L K S     ++NS+YGL LL  SL  DGV    QE +    +P+V++ MFYTN WA+ +  A A A+GQ + G  FCA+NP ++  V  FS+ +A GQ FIY+TI  F+ L C TITTTRKFFTI+FSV+ +GH +S   W GVA+VF G+G+ +  K+ +
Sbjct:   73 RMPLQPFAFTSFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLLRRKKYSAREYFCVLLITAGIAVFQLGKASAKHAAQENSSYGLVLLFLSLTLDGVSGPKQEEIAQTLRPSVHQQMFYTNLWAVIYTGAGALATGQGLAGLAFCAENPAILSSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSATSWAGVAVVFAGLGWELVSKYHK 309          
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: K3X0M7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0M7_GLOUD)

HSP 1 Score: 251 bits (642), Expect = 3.940e-79
Identity = 119/236 (50.42%), Postives = 165/236 (69.92%), Query Frame = 1
Query:   31 MPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
            MP Q F  T  AY+GAM+ S EAL++V++PT+ LGKSCKMIPVM+ GVL  +K+Y++REY+CV LIT+G+ +F L K S+    ++NSTYGL LL  SL  DGV    QE +    +P+V++ MFYTN WA+ +  A A  +GQ   G  FC +NP ++  V  FS+ +A GQ FIY+TI  F+ L C TITTTRKFFTI+FSV+ +GH++S   W GV +VFVG+G+ +  K+++
Sbjct:   81 MPLQPFAFTSFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMIMGVLIRRKKYTMREYICVLLITVGIAVFQLGKASSKHAAQENSTYGLILLFLSLTLDGVSGPKQEEISQTLRPSVHQQMFYTNLWAVIYTGAGALLTGQAFSGFFFCVENPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHQLSAMSWIGVTIVFVGLGWELTSKYQK 316          
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: A0A6V2XTI4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XTI4_HETAK)

HSP 1 Score: 253 bits (647), Expect = 3.980e-79
Identity = 121/246 (49.19%), Postives = 171/246 (69.51%), Query Frame = 1
Query:    1 MQCVGTSGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
            M  +G SG+KMPQ +F   G+ YIGAM+ S E+L++VN+PT+ LGKSCKMIPVMLFGVLFA K+YS++EYLCV LIT G+ +F ++ G      K+NS +GL LL  SL  DG+  S+Q +LK   KPTV+E+MF+TN WA+  L+     +GQ   G  +   NP +   +  FS  +A GQ FI++T++ F+PL C TITTTRKFFT++FSV  FGH+++   W  V++VF G+   ++GK+++
Sbjct:  110 MLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMS-GKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGLTGEVYGKYQK 354          
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: H3GWN5_PHYRM (Uncharacterized protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=H3GWN5_PHYRM)

HSP 1 Score: 248 bits (633), Expect = 9.270e-78
Identity = 116/237 (48.95%), Postives = 166/237 (70.04%), Query Frame = 1
Query:   28 KMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
            +MP   F +T  AY+GAM+ S EAL++V+FPT+ LGKSCKMIPVML GVL  +K+Y++R+Y+CV +IT G+ +F L K S    +++NSTYGL LL ASL  DG+    QE +    +P+V++ M  TN WA+ +    A  +GQ ++G  FC +NP ++  V  FS+ +A GQ FIY+TI  F+ L C TITTTRKFFTI+FSV+ +GH +SL  W GVA+VF+G+G+ +  K+++
Sbjct:   82 RMPLAPFAMTAGAYLGAMLCSNEALKHVSFPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVVVITTGIAVFQLGKASAKHAERENSTYGLLLLFASLTLDGISGPKQEEIAHQLRPSVHQQMLNTNIWAVVYTGVGALVTGQALEGFFFCIENPSILNSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSWLGVAVVFIGLGWELSSKYQK 318          
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: A0A0P1AG43_PLAHL (Solute carrier family 35 member b1 n=6 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AG43_PLAHL)

HSP 1 Score: 246 bits (628), Expect = 5.260e-77
Identity = 116/237 (48.95%), Postives = 165/237 (69.62%), Query Frame = 1
Query:   28 KMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
            +MP   F LT  AY+GAM+ S EAL++V+FPT+ LGKSCKMIPVML GVL  +K+Y++R+Y+CV +IT G+ +F L K S    +++NSTYGL LL  SL  DG+    QE +    +P+V++ MF TN WA+ +    A  +GQ ++G  FC +NP ++  V  FS+ +A GQ FIY+TI  F+ L C TITTTRKFFTI+FSV+ +GH +SL  W GVA+V +G+G+ +  K+++
Sbjct:   82 RMPLAPFALTAGAYLGAMLCSNEALKHVSFPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVLVITSGIAVFQLGKSSAKHAERENSTYGLLLLFLSLTLDGISGPKQEEIAHQLRPSVHQQMFNTNIWAVVYTGIGALVTGQALEGLYFCINNPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSWFGVAIVNIGLGWELSSKYRK 318          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G364_ECTSI1.470e-19294.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQ56_9PHAE1.690e-14488.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G358_ECTSI3.100e-11872.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCP5_9STRA1.370e-8657.61UAA transporter n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A2D4BZF8_PYTIN6.870e-8050.42Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A5D6XRA2_9STRA7.900e-8051.48Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3X0M7_GLOUD3.940e-7950.42Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6V2XTI4_HETAK3.980e-7949.19Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
H3GWN5_PHYRM9.270e-7848.95Uncharacterized protein n=18 Tax=Peronosporaceae T... [more]
A0A0P1AG43_PLAHL5.260e-7748.95Solute carrier family 35 member b1 n=6 Tax=Peronos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig109contigEcto-sp8_S_contig109:7848..11776 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score541.2
Seed ortholog evalue2.9e-151
Seed eggNOG ortholog2880.D7G364
Model size861
KEGG koko:K15275
KEGG TC2.A.7.11.1,2.A.7.11.4
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.UDP-galactose transmembrane transporter activity
EggNOG OGsCOG0697@1,KOG1580@2759
Ec32 ortholog descriptionUAA transporter
Ec32 orthologEc-03_004650.1
Cds size861
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig109.1272.1prot_Ecto-sp8_S_contig109.1272.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig109 7848..11776 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143179.4633822-CDS-Ecto-sp8_S_contig109:7847..78771681143179.4633822-CDS-Ecto-sp8_S_contig109:7847..7877Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig109 7848..7877 +
1681143179.4721406-CDS-Ecto-sp8_S_contig109:8673..87901681143179.4721406-CDS-Ecto-sp8_S_contig109:8673..8790Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig109 8674..8790 +
1681143179.4792-CDS-Ecto-sp8_S_contig109:9214..93461681143179.4792-CDS-Ecto-sp8_S_contig109:9214..9346Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig109 9215..9346 +
1681143179.486791-CDS-Ecto-sp8_S_contig109:10060..101381681143179.486791-CDS-Ecto-sp8_S_contig109:10060..10138Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig109 10061..10138 +
1681143179.4940252-CDS-Ecto-sp8_S_contig109:10621..107711681143179.4940252-CDS-Ecto-sp8_S_contig109:10621..10771Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig109 10622..10771 +
1681143179.5036159-CDS-Ecto-sp8_S_contig109:11235..114081681143179.5036159-CDS-Ecto-sp8_S_contig109:11235..11408Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig109 11236..11408 +
1681143179.5198526-CDS-Ecto-sp8_S_contig109:11595..117761681143179.5198526-CDS-Ecto-sp8_S_contig109:11595..11776Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig109 11596..11776 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig109.1272.1

>prot_Ecto-sp8_S_contig109.1272.1 ID=prot_Ecto-sp8_S_contig109.1272.1|Name=mRNA_Ecto-sp8_S_contig109.1272.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=287bp
MQCVGTSGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKM
IPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTY
GLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAF
ASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACAT
ITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKRPSSE
EEHDCRQEESEASMRLLEEGDRDASCMGQRLSSSLE*
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mRNA from alignment at Ecto-sp8_S_contig109:7848..11776+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig109.1272.1 ID=mRNA_Ecto-sp8_S_contig109.1272.1|Name=mRNA_Ecto-sp8_S_contig109.1272.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3929bp|location=Sequence derived from alignment at Ecto-sp8_S_contig109:7848..11776+ (Ectocarpus species8 EcLAC_412)
ATGCAGTGTGTCGGGACATCGGGGGAGAAGGTGCGACCCCAGACATTGTT ACCCGATGTCCGGGCCTGGTCAAACGCGGTCGATGATGCCGCCTGCCTGT CGTTAGACGGCCACGGTTATGATCCACACGCTAGAGTCAATGTTGAGGAA GCCAGACACAAAATAGACTACCAGCAGGATCTATGTACCAGTCCGCCGCA TGGTGCAGGTCCGCTAGACCCGGCACGACCTCCTTTTTGTTCCAGACAAC ACACATGAAAATACTTCAAACCGTTCTAAGTAAGACCTACTTCACTCTGT ATGCTCATGTGGACAACGCCTTGTGAACTTCCATGATGTTGAAGGTTTTT CGGAACCATTATCACCTCTCGCCCAGGAATTGTTCCGAAAAATACTTGAT TGCCCCCCATTGCGATCGGCACGAATTTCGCCCGCGAGCGAGGCTGTGGG TCCAAGCACTCTATTGAGCGGGCCTGTATAGGAACCTGAGTGCAATCAGA CCGCGAGTCCAAACACTCCAGAGGGCCTGCACCTGAACCTGAGCGCAATC GAAACCAACCACTGCTGCCGCCTGGATCTTTGTACGTACCGCAGACTGCC TCTCTACATGTAGCGCGTTGGCGACCCCGTACAGTGCGTACTCGGGATAT AAAAGTTGTACGCGGTTCGGCATCGGTCGGTATTTTTTCATTCAGAGTTG TGTTGCAACACCTGGCGATGCGGAAAGGCAAAATTCATCGCGAATGCGAC GGCTATGCATTTCCACGACACGACTCGTATGAGGTCTTCATTCGCGATGA TTTGTAATTTGTTCCATTGTTCGCAGATGCCGCAGCAGCTCTTCGGGTTG ACCGGGTCCGCTTACATCGGCGCTATGATCCTGTCGATAGAGGCACTCCA GTACGTTAACTTCCCGACCAAGGAGCTTGGGAAGTCTTGCAAGGTAAAGC TGAAGGTCCTCGTTTTTGTCTGGGTGACGGGCGACCATGGCGGCAGCGGG TAGATTTGGTGCACACAAGACAAGACTGTTTGGTGGCGGTGGCCCCTTCC TCGCTGCGCACCTCGGTGCCCTCCTAAGACGAATGTAGTACAGCACTTCC AGTAACGTTGACCGAGCCAACGGCGGTGGAGAACAACGGTTTTTATTTTC GATACTGCGCACCGGAACCAGGGTACTCAATTTACTATTTGGTTAGTATC TTTCTGTTTATTGAAAGCTACATAGTTCGTTTTCAGTTTTTTTGGAAAGA CACGTAGGCCACATGCAGGTCCGCGATGATTGCGACCGATTGCCGCTGAC GGAGATCACATACCGATGGAGTTACCTGTGCTATTCTTGTGTGTCTGTGT CTGTGGCCGCAACAAAGATGATCCCGGTGATGCTGTTCGGAGTGCTGTTC GCCAAGAAGCGGTACAGCGTGCGAGAGTACCTCTGCGTGGCGCTCATCAC GATGGGCGTGGTCATCTTCAACCTAGCGAAGGGGTCCAACAACGAACAGG TACTGTATCTGCTTACGAATTAAGCTTGCCAGATATTGCGCGTCGGATGT CCGGCTTGGTTGAAAGTCTCTTCCCGTGGTTGGTTTTCTTCTTGTTTGCT GTTCTTTTTCTCGTCCCATCTCTTCTCGGCGCCAGGTTTCGCCTTTTTTT TTATACGTCTGAGGCACCAATCGGGGTCATCAAGGAAGTGTTCTCCACCT AGATGCACAAACTCCATGGTTCTTGCTCCGTCAATGGTTTTTTCCATCGG TTTTCTCCTAACTGCCGTGAGAATACCGCCCTGATGGTCGGTTCCGATGG TCCGCCGGATTACCGCCGGATTTTTTTACAACCGCCTCCGCCAAAGTCGT TACCGTCGCAATAGCGCATAGTCCGCCTACCGCCAGACATAACTGCTATT GTGCGTTACCGTTGAACAGGTACCACCAAATTCAGGTTGTACCGCCTCCG ACGAAGTCTTCACTGCCCGTAACTCCAGTACCACCTACCACCGAAAAATG CCGACGTATGGCTTTGCCGCCGAAGCCATGGCAGCTATGAAACCGTTACC GATGCTTGCCACTGCCATGGCCTACAACGCCCCATGTCCTAGGCGTGGAA TTTATCGTCAAAACGTTGTCTGGCTTTGTTTCTTCTCGCTTTTGGTTGAG TCTGAGAAAGAGACATTTAATGTTCAACTCTTTTGTTCTTCCGTGCCTTT GTGGCCCTTTCAGGACAAGCAAAACAGCACGTATGGGCTGTGCCTACTAG TTGCAAGCCTCATCTTCGACGGGGTCATGACCAGCTCTCAGGTTTGTCCA CAACTGTTGTCCTCGTTGATAATCCGCGGCGTTCCTGCTGTGTTGCCGTA ACAGGGTGACGTTGTTGACGGCGGTGACTGACTCTGCTGCAACCCTCTAT CCGTATTGCAGGTCCTATGTTCTTATCACGCTAAATCGGAAAATCCAATT CTGGCGGGGACCGAGTGGCGAGCTCATTCGTCACTTCACTTTCGATGTCT CCCTCCGCAATATATGCACTCATCGATGTGCCGTCTTGTCTTAATGTCAG TATCGACGTGGTTTTCTACCTTGTAAAAGGCGAAAGCAAACCACTTGACA TACGGATGGCCCCTCGCAAGGTGTTGGCGGATACGTAGTGTGTGGGTGGG CGTCCGACAGCTTGACGACGGGCACCCTGTTATCTACAAGAACGTGTGGT GTCGTCGTGGACAACCCGTACCCGCTGCCTTAACCCGCGCTCCTATGTAC ACCCCCCGCACCTCCCCCGCCCAGGAGCGATTGAAGGCCATCTGCAAGCC CACCGTGTACGAGATGATGTTCTACACGAACGCGTGGGCGCTGGGCTTCC TGTCGGCGGCAGCCTTCGCCTCGGGGCAGTGGGTGAAAGGGGCGCTGTTC TGCGCGGACAACCCGCTGGTCATGGTGAGTCCGTGAATGACAGCACGCTC TCTGGGTCAAATCTGTGTGATGTTTGTTTCGCGTCATGTGTCATTTTTCT TTGACATTTCTTTGGCATATTTCTTGGCATTCTTTCGTGTGAGAAGTGAA GGAGGATCGAGGGCAGGGACAGGGATATGGCTCGGACTGGGAGGGTCGGG ATCGTGGTGATTGTAACGTTCGAGCATATTTCCAGATGATTTTTCGTAAT ATCATAGCCCCAGCGTCGTGTTGGCTTCGCATCTGCTCTGTTCACCGACA CGCCCGCACGCGTTACGATTTCTACGACAGGCGTTGTTGGCCGACCACTT TAGGAACGCCAACACAAAACATGATCTCGCTTCCAAACATCATCATACGT TCGCTCCAAACCAAAGTGACCTGCTACCGAACTGTAAACATGTGTGTGCG TATTGATTTTTCCTGGCCTTGATTTCCACCGTCGGAAGGGCTACGTGGTG GCGTTCTCATTGGCGGCGGCGTGCGGCCAGTTCTTCATCTACTACACCAT CACCACCTTCAATCCGCTGGCGTGCGCGACGATCACAACGACCCGAAAGT TCTTCACTATCGTCTTCTCCGTCATCACCTTCGGACACCGCATCAGCCTG AAGCAGTGGGGGTGAGTGGTGTTCCCTCTGTCCCTTGCGGCGTTGCTCCT TGATCCGCGGTTTCGTACTTGACTCGCTTTTGGTTGTTGTGTTGCTTTGG CTGTGGCTTTTGCTGTTGTTGTTGAAGCTGCGCAAACGTACCAGTTCGTC ACCCGTTAACATCGAAACGTGTTCATTCACGTTTTATGTTTTCGGCAGGG GTGTGGCAATGGTGTTCGTCGGCATCGGCTTCTATATGCACGGCAAGCAC AAGCGGCCTAGTAGCGAGGAGGAACACGATTGCCGCCAAGAAGAATCCGA AGCCTCAATGCGACTGCTTGAAGAAGGCGATCGCGATGCCTCATGTATGG GCCAACGTCTATCGTCAAGTCTGGAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig109:7848..11776+

>mRNA_Ecto-sp8_S_contig109.1272.1 ID=mRNA_Ecto-sp8_S_contig109.1272.1|Name=mRNA_Ecto-sp8_S_contig109.1272.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp8_S_contig109:7848..11776+ (Ectocarpus species8 EcLAC_412)
ATGCAGTGTGTCGGGACATCGGGGGAGAAGATGCCGCAGCAGCTCTTCGG
GTTGACCGGGTCCGCTTACATCGGCGCTATGATCCTGTCGATAGAGGCAC
TCCAGTACGTTAACTTCCCGACCAAGGAGCTTGGGAAGTCTTGCAAGATG
ATCCCGGTGATGCTGTTCGGAGTGCTGTTCGCCAAGAAGCGGTACAGCGT
GCGAGAGTACCTCTGCGTGGCGCTCATCACGATGGGCGTGGTCATCTTCA
ACCTAGCGAAGGGGTCCAACAACGAACAGGACAAGCAAAACAGCACGTAT
GGGCTGTGCCTACTAGTTGCAAGCCTCATCTTCGACGGGGTCATGACCAG
CTCTCAGGAGCGATTGAAGGCCATCTGCAAGCCCACCGTGTACGAGATGA
TGTTCTACACGAACGCGTGGGCGCTGGGCTTCCTGTCGGCGGCAGCCTTC
GCCTCGGGGCAGTGGGTGAAAGGGGCGCTGTTCTGCGCGGACAACCCGCT
GGTCATGGGCTACGTGGTGGCGTTCTCATTGGCGGCGGCGTGCGGCCAGT
TCTTCATCTACTACACCATCACCACCTTCAATCCGCTGGCGTGCGCGACG
ATCACAACGACCCGAAAGTTCTTCACTATCGTCTTCTCCGTCATCACCTT
CGGACACCGCATCAGCCTGAAGCAGTGGGGGGGTGTGGCAATGGTGTTCG
TCGGCATCGGCTTCTATATGCACGGCAAGCACAAGCGGCCTAGTAGCGAG
GAGGAACACGATTGCCGCCAAGAAGAATCCGAAGCCTCAATGCGACTGCT
TGAAGAAGGCGATCGCGATGCCTCATGTATGGGCCAACGTCTATCGTCAA
GTCTGGAGTGA
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