mRNA_Ecto-sp8_S_contig109.1272.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: D7G364_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G364_ECTSI) HSP 1 Score: 540 bits (1391), Expect = 1.470e-192 Identity = 271/286 (94.76%), Postives = 279/286 (97.55%), Query Frame = 1
Query: 1 MQCVGTSGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKRPSSEEEHDCRQEESEASMRLLEEGDRDASCMGQRLSSSLE 858
MQCVG+SGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKK+YSVREYLCVALIT G+VIFNLA+ SNNEQDK+NS YGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQW+KG+LFCADNPLV GYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGH ISLKQWGGVAMVFVGIGFYMHGKHKRPSSEEEHDC QEESEASMRLLEEGDRDASC+GQRLSSS E
Sbjct: 63 MQCVGSSGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITTGIVIFNLAERSNNEQDKRNSMYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWMKGSLFCADNPLVTGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHSISLKQWGGVAMVFVGIGFYMHGKHKRPSSEEEHDCCQEESEASMRLLEEGDRDASCIGQRLSSSPE 348
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: A0A6H5JQ56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ56_9PHAE) HSP 1 Score: 414 bits (1064), Expect = 1.690e-144 Identity = 210/237 (88.61%), Postives = 218/237 (91.98%), Query Frame = 1
Query: 148 MIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKRPSSEEEHDCRQEESEASMRLLEEGDRDASCMGQRLSSSLE 858
MIPVMLFGVLFAKK+YSVREYLCVALITMG+VIFNLAKGS E+DKQNSTYGL LLV SLIFDGVMTSSQERLK ICKPT YEMMFYTNAWALGFLSAAAFASGQWVKG+LFCADNPLVMGYVVAFSL AACGQFFIYYTITTF+PLACATITTTRKFFTIVFSVITFGH ISLKQWGGVAMVFVGIGFYMHGKHKRP E HD R +ESEASMRLLEEGD DAS + +R SSLE
Sbjct: 1 MIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLSLLVTSLIFDGVMTSSQERLKTICKPTAYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLTAACGQFFIYYTITTFSPLACATITTTRKFFTIVFSVITFGHSISLKQWGGVAMVFVGIGFYMHGKHKRPRDEGGHDLRHDESEASMRLLEEGDCDASFIDRRPPSSLE 237
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: D7G358_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G358_ECTSI) HSP 1 Score: 351 bits (901), Expect = 3.100e-118 Identity = 176/242 (72.73%), Postives = 200/242 (82.64%), Query Frame = 1
Query: 13 GTSGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
G SG+KMP LFG G AYIGAM+ SIEAL+YVNFPTKELGKSCKMIPVMLFGVLFAKK+YS++EYLCVALIT+G+V FNL+ +N++DK+NSTYGL LL SLI DGV S+QERLKA CKPTV+EMMF+ NAWAL LSAAA+ SGQ V+G FC+ NP VM YV+ FSLAAA GQ FIYYTI+ FNPL C TITTTRKFFTIV SVI FGH I KQWGGVAMVF GIG+ M GK++R
Sbjct: 85 GRSGDKMPHHLFGTAGFAYIGAMVCSIEALKYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSLQEYLCVALITVGIVTFNLSGKPHNKEDKENSTYGLGLLAFSLILDGVTGSAQERLKAACKPTVHEMMFFMNAWALAILSAAAYLSGQAVEGYAFCSANPSVMSYVLGFSLAAAFGQNFIYYTISNFNPLVCTTITTTRKFFTIVCSVIIFGHAIGPKQWGGVAMVFTGIGYEMRGKYQR 326
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: A0A835ZCP5_9STRA (UAA transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCP5_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.370e-86 Identity = 140/243 (57.61%), Postives = 176/243 (72.43%), Query Frame = 1
Query: 19 SGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKRPSS 747
SGE +P +LF + G+ YI AMI S+E+L Y+NFPTKELGKSCKMIPVMLFGV+FA KRYSVR+Y+ VALIT G+V FNLA ++ ++NSTYGL LL SL+ DGV S+Q+ +K K TV+EMMF+ NAWAL L+ A +GQ G FC +NP V+ + F+L AA GQ FIY+TI+ F+ L C TITTTRKFFTI+FSV+ FGH +S KQW GVAMVF + M KH++ S
Sbjct: 100 SGEAIPHKLFSMAGAGYISAMICSLESLNYINFPTKELGKSCKMIPVMLFGVVFAGKRYSVRDYVGVALITAGIVTFNLA--GKHKSGRENSTYGLALLFMSLVLDGVTGSTQDNIKRAHKHTVHEMMFWMNAWALVVLTPMAVLTGQAAGGYAFCQENPAVLRDLFGFALTAALGQNFIYFTISHFSSLVCTTITTTRKFFTILFSVLFFGHPMSPKQWAGVAMVFTALIDNMWSKHQKNQS 340
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: A0A2D4BZF8_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZF8_PYTIN) HSP 1 Score: 254 bits (648), Expect = 6.870e-80 Identity = 119/236 (50.42%), Postives = 166/236 (70.34%), Query Frame = 1
Query: 31 MPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
MP + F +T SAY+GAM+ S EAL++V++PT+ LGKSCKMIPVML GVL +K+Y++R+Y+CV LIT G+ +F L K S+ ++NSTYGL LL SL DG+ QE + +PTV++ MFYTN WA+ + A A +GQ V G FC +NP ++ V FS+ +A GQ FIY+TI F+ L C TITTTRKFFTI+FSV+ +GH ++ W GVA+VF G+G+ + K+++
Sbjct: 92 MPLKPFAVTSSAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVLLITTGIAVFQLGKASSKHASQENSTYGLLLLFTSLTLDGISGPKQEEISQTLRPTVHQQMFYTNLWAVLYTGAGALVTGQAVSGFQFCVENPAILNSVFYFSICSAXGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHSLTAMSWIGVAIVFTGLGWELSSKYQK 327
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: A0A5D6XRA2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA2_9STRA) HSP 1 Score: 253 bits (646), Expect = 7.900e-80 Identity = 122/237 (51.48%), Postives = 163/237 (68.78%), Query Frame = 1
Query: 28 KMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
+MP Q F T AY+GAM+ S EAL++V++PT+ LGKSCKMIPVML GVL +K+YS REY CV LIT G+ +F L K S ++NS+YGL LL SL DGV QE + +P+V++ MFYTN WA+ + A A A+GQ + G FCA+NP ++ V FS+ +A GQ FIY+TI F+ L C TITTTRKFFTI+FSV+ +GH +S W GVA+VF G+G+ + K+ +
Sbjct: 73 RMPLQPFAFTSFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLLRRKKYSAREYFCVLLITAGIAVFQLGKASAKHAAQENSSYGLVLLFLSLTLDGVSGPKQEEIAQTLRPSVHQQMFYTNLWAVIYTGAGALATGQGLAGLAFCAENPAILSSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSATSWAGVAVVFAGLGWELVSKYHK 309
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: K3X0M7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0M7_GLOUD) HSP 1 Score: 251 bits (642), Expect = 3.940e-79 Identity = 119/236 (50.42%), Postives = 165/236 (69.92%), Query Frame = 1
Query: 31 MPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
MP Q F T AY+GAM+ S EAL++V++PT+ LGKSCKMIPVM+ GVL +K+Y++REY+CV LIT+G+ +F L K S+ ++NSTYGL LL SL DGV QE + +P+V++ MFYTN WA+ + A A +GQ G FC +NP ++ V FS+ +A GQ FIY+TI F+ L C TITTTRKFFTI+FSV+ +GH++S W GV +VFVG+G+ + K+++
Sbjct: 81 MPLQPFAFTSFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMIMGVLIRRKKYTMREYICVLLITVGIAVFQLGKASSKHAAQENSTYGLILLFLSLTLDGVSGPKQEEISQTLRPSVHQQMFYTNLWAVIYTGAGALLTGQAFSGFFFCVENPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHQLSAMSWIGVTIVFVGLGWELTSKYQK 316
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: A0A6V2XTI4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XTI4_HETAK) HSP 1 Score: 253 bits (647), Expect = 3.980e-79 Identity = 121/246 (49.19%), Postives = 171/246 (69.51%), Query Frame = 1
Query: 1 MQCVGTSGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
M +G SG+KMPQ +F G+ YIGAM+ S E+L++VN+PT+ LGKSCKMIPVMLFGVLFA K+YS++EYLCV LIT G+ +F ++ G K+NS +GL LL SL DG+ S+Q +LK KPTV+E+MF+TN WA+ L+ +GQ G + NP + + FS +A GQ FI++T++ F+PL C TITTTRKFFT++FSV FGH+++ W V++VF G+ ++GK+++
Sbjct: 110 MLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMS-GKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGLTGEVYGKYQK 354
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: H3GWN5_PHYRM (Uncharacterized protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=H3GWN5_PHYRM) HSP 1 Score: 248 bits (633), Expect = 9.270e-78 Identity = 116/237 (48.95%), Postives = 166/237 (70.04%), Query Frame = 1
Query: 28 KMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
+MP F +T AY+GAM+ S EAL++V+FPT+ LGKSCKMIPVML GVL +K+Y++R+Y+CV +IT G+ +F L K S +++NSTYGL LL ASL DG+ QE + +P+V++ M TN WA+ + A +GQ ++G FC +NP ++ V FS+ +A GQ FIY+TI F+ L C TITTTRKFFTI+FSV+ +GH +SL W GVA+VF+G+G+ + K+++
Sbjct: 82 RMPLAPFAMTAGAYLGAMLCSNEALKHVSFPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVVVITTGIAVFQLGKASAKHAERENSTYGLLLLFASLTLDGISGPKQEEIAHQLRPSVHQQMLNTNIWAVVYTGVGALVTGQALEGFFFCIENPSILNSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSWLGVAVVFIGLGWELSSKYQK 318
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Match: A0A0P1AG43_PLAHL (Solute carrier family 35 member b1 n=6 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AG43_PLAHL) HSP 1 Score: 246 bits (628), Expect = 5.260e-77 Identity = 116/237 (48.95%), Postives = 165/237 (69.62%), Query Frame = 1
Query: 28 KMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKRYSVREYLCVALITMGVVIFNLAKGSNNEQDKQNSTYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGALFCADNPLVMGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHRISLKQWGGVAMVFVGIGFYMHGKHKR 738
+MP F LT AY+GAM+ S EAL++V+FPT+ LGKSCKMIPVML GVL +K+Y++R+Y+CV +IT G+ +F L K S +++NSTYGL LL SL DG+ QE + +P+V++ MF TN WA+ + A +GQ ++G FC +NP ++ V FS+ +A GQ FIY+TI F+ L C TITTTRKFFTI+FSV+ +GH +SL W GVA+V +G+G+ + K+++
Sbjct: 82 RMPLAPFALTAGAYLGAMLCSNEALKHVSFPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVLVITSGIAVFQLGKSSAKHAERENSTYGLLLLFLSLTLDGISGPKQEEIAHQLRPSVHQQMFNTNIWAVVYTGIGALVTGQALEGLYFCINNPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSWFGVAIVNIGLGWELSSKYRK 318 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig109.1272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig109.1272.1 >prot_Ecto-sp8_S_contig109.1272.1 ID=prot_Ecto-sp8_S_contig109.1272.1|Name=mRNA_Ecto-sp8_S_contig109.1272.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=287bp MQCVGTSGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMback to top mRNA from alignment at Ecto-sp8_S_contig109:7848..11776+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig109.1272.1 ID=mRNA_Ecto-sp8_S_contig109.1272.1|Name=mRNA_Ecto-sp8_S_contig109.1272.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3929bp|location=Sequence derived from alignment at Ecto-sp8_S_contig109:7848..11776+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig109:7848..11776+ >mRNA_Ecto-sp8_S_contig109.1272.1 ID=mRNA_Ecto-sp8_S_contig109.1272.1|Name=mRNA_Ecto-sp8_S_contig109.1272.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp8_S_contig109:7848..11776+ (Ectocarpus species8 EcLAC_412)back to top |