mRNA_Ecto-sp8_S_contig10896.1270.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10896.1270.1 vs. uniprot
Match: D8LQE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE5_ECTSI) HSP 1 Score: 282 bits (722), Expect = 2.320e-92 Identity = 136/140 (97.14%), Postives = 139/140 (99.29%), Query Frame = 1
Query: 4 CRPLNPVQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVWGR 423
+PLNPVQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLA+ALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGG+VGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVWGR
Sbjct: 284 AKPLNPVQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLANALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGRVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVWGR 423
BLAST of mRNA_Ecto-sp8_S_contig10896.1270.1 vs. uniprot
Match: W7TRZ0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRZ0_9STRA) HSP 1 Score: 119 bits (297), Expect = 6.050e-31 Identity = 66/143 (46.15%), Postives = 91/143 (63.64%), Query Frame = 1
Query: 4 CRPLNP-----VQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVW 417
RPLN + GQ +++QPGC+HANMDLFKWA++L P PS+ + LELAV+CR++DMRASPYDL+ +P VG+G G G +D +P++IETEEGRKEYQ Q L+ ++ P+R L+ D +W
Sbjct: 53 ARPLNVWGQDLSEARSHGQLAHEQPGCLHANMDLFKWAVKLGPYAPSDLVRQTLELAVACRVVDMRASPYDLSPL-VLP---VGKGRGMPSGY---RFDASPIKIETEEGRKEYQAEQQALFDKAQPLRTRLLNVYDLFFRMW 188
BLAST of mRNA_Ecto-sp8_S_contig10896.1270.1 vs. uniprot
Match: UPI0018F14E5F (3-methyladenine DNA glycosylase n=1 Tax=Qaidamihabitans albus TaxID=2795733 RepID=UPI0018F14E5F) HSP 1 Score: 121 bits (303), Expect = 7.020e-31 Identity = 66/137 (48.18%), Postives = 82/137 (59.85%), Query Frame = 1
Query: 4 CRPLNPVQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDV 414
RPLN +Q R QR +QPGC+HANMDL+KWA +L PL+P+E L D ELA R+LDMRASPYDL++ G +PVRIET EGR EY +AQAE R+ P+R L++H LL V
Sbjct: 176 ARPLNRLQPTRQTQRDFEQPGCLHANMDLYKWAYKLGPLVPAELLGDCFELAAEVRLLDMRASPYDLSSFGH-----------------------SPVRIETAEGRAEYARAQAEFAHRAAPLRNQLVQHCRSLLGV 289
BLAST of mRNA_Ecto-sp8_S_contig10896.1270.1 vs. uniprot
Match: K8YX90_NANGC (Uncharacterized protein (Fragment) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YX90_NANGC) HSP 1 Score: 119 bits (299), Expect = 4.910e-30 Identity = 67/143 (46.85%), Postives = 91/143 (63.64%), Query Frame = 1
Query: 4 CRPLNP-----VQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVW 417
RPLN + GQ +++QPGC+HANMDLFKWA++L P PS+ L LELAV+CR++DMRASPYDL+ +P VG+G G G +D +P++IETEEGRKEYQ Q L+ ++ P+R L+ D +W
Sbjct: 175 ARPLNVWGQDLSEARSHGQLAHEQPGCLHANMDLFKWAVKLGPYAPSDLLRQTLELAVACRVVDMRASPYDLSPL-VLP---VGKGRGLPSGY---RFDASPIKIETEEGRKEYQAEQQALFDKAQPLRTRLLNVYDLFFRMW 310
BLAST of mRNA_Ecto-sp8_S_contig10896.1270.1 vs. uniprot
Match: UPI000A9BE976 (3-methyladenine DNA glycosylase n=1 Tax=Nocardia harenae TaxID=358707 RepID=UPI000A9BE976) HSP 1 Score: 119 bits (297), Expect = 1.440e-29 Identity = 63/135 (46.67%), Postives = 85/135 (62.96%), Query Frame = 1
Query: 10 PLNPVQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDV 414
P N + L R Q + +QPGC+HA MDL+KWA +L PLLPS + DA ELA + R LDMRASPYDL+A+G TPV IET GR +Y +AQA+L +R++P+R++L+ H +RLL+V
Sbjct: 213 PRNELPLTRADQVAREQPGCLHAGMDLYKWAFKLTPLLPSPLVLDAFELACAARELDMRASPYDLSAYGY-----------------------TPVPIETPSGRADYVRAQADLARRALPLRQALLEHCERLLEV 324
BLAST of mRNA_Ecto-sp8_S_contig10896.1270.1 vs. uniprot
Match: A0A2T0LPF7_9PSEU (Uncharacterized protein n=1 Tax=Prauserella shujinwangii TaxID=1453103 RepID=A0A2T0LPF7_9PSEU) HSP 1 Score: 116 bits (290), Expect = 6.690e-29 Identity = 65/139 (46.76%), Postives = 82/139 (58.99%), Query Frame = 1
Query: 4 CRPLNPVQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVWG 420
RPLN ++ R QR +QPGC+HANMDL+KWA +L P +P+E + D ELA R+LDMRASPYDL+A G +PVRIET EGR EY +AQA +R+ P+R L+R LLDV G
Sbjct: 179 ARPLNRLRPTRETQRDFEQPGCLHANMDLYKWAYKLGPFVPAELVGDCFELAADIRLLDMRASPYDLSALGH-----------------------SPVRIETPEGRAEYARAQAAFARRAAPLRDRLLRLCRDLLDVTG 294
BLAST of mRNA_Ecto-sp8_S_contig10896.1270.1 vs. uniprot
Match: A0A0M0J9Y2_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J9Y2_9EUKA) HSP 1 Score: 116 bits (290), Expect = 1.330e-28 Identity = 66/138 (47.83%), Postives = 87/138 (63.04%), Query Frame = 1
Query: 10 PLNPVQL--ERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVW 417
PLN + R Q +QPGCVHA+MDLF+++L+LWP LP+E LAD LELA++ R+LDMRASPYDL+ GG G ++D +PVRIET EGRK YQ+ Q+ L + P+R L+R D + VW
Sbjct: 190 PLNTISPTPSRATQAQLEQPGCVHASMDLFRYSLKLWPWLPAELLADTLELAIASRVLDMRASPYDLSQWQ----------GGAAG-----SFDLSPVRIETAEGRKLYQREQSRLASWAQPLRARLLREYDSAIAVW 312
BLAST of mRNA_Ecto-sp8_S_contig10896.1270.1 vs. uniprot
Match: A0A2W4JFU3_9ACTN (3-methyladenine DNA glycosylase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2W4JFU3_9ACTN) HSP 1 Score: 115 bits (288), Expect = 1.350e-28 Identity = 65/139 (46.76%), Postives = 83/139 (59.71%), Query Frame = 1
Query: 4 CRPLNPVQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDVWG 420
RPLN QL R GQ N+QPGC+HANMDL+K+A +L PL+PSE +A+A LA R LDMRASPYDL+A G +PVRIET EGR EY AQ + +R+ P+R L+ +DR+ + G
Sbjct: 183 ARPLNQRQLSREGQLENEQPGCLHANMDLYKYAYKLCPLIPSELVAEAFALAREIRALDMRASPYDLSALGY-----------------------SPVRIETPEGRAEYVAAQRDFAERAAPLRARLIEAIDRVTALAG 298
BLAST of mRNA_Ecto-sp8_S_contig10896.1270.1 vs. uniprot
Match: A0A498AGD2_9ACTN (Uncharacterized protein n=1 Tax=Micromonospora sp. M71_S20 TaxID=592872 RepID=A0A498AGD2_9ACTN) HSP 1 Score: 114 bits (286), Expect = 2.460e-28 Identity = 64/137 (46.72%), Postives = 80/137 (58.39%), Query Frame = 1
Query: 4 CRPLNPVQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLDV 414
RPLN + R Q +++QPGC+HANMDL+KWA +L PL+PSE +ADA ELA R LDMRASPYDL+A G P VR+ET EGR EY +AQ +R+ P+R L+ DRLL
Sbjct: 181 ARPLNLLSPTRETQHAHEQPGCLHANMDLYKWAYKLSPLVPSELVADAFELAREIRTLDMRASPYDLSALGYAP-----------------------VRVETVEGRHEYVRAQRSFAERAAPLRARLVAECDRLLST 294
BLAST of mRNA_Ecto-sp8_S_contig10896.1270.1 vs. uniprot
Match: A0A6V8K6Z1_9ACTN (Uncharacterized protein n=1 Tax=Phytohabitans houttuyneae TaxID=1076126 RepID=A0A6V8K6Z1_9ACTN) HSP 1 Score: 113 bits (282), Expect = 6.670e-28 Identity = 64/136 (47.06%), Postives = 78/136 (57.35%), Query Frame = 1
Query: 4 CRPLNPVQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGKVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMDRLLD 411
RPLN +Q R Q N+QPGC+HANMDL+KWA +L PL+ SE +ADA LA R LDMRASPYDL A G P VR+ET EGR+EY +AQ R+ P+R L+ +DRL D
Sbjct: 165 ARPLNLIQPSRESQHDNEQPGCLHANMDLYKWAYKLSPLVESELVADAFALARDIRALDMRASPYDLAALGYEP-----------------------VRVETAEGRQEYARAQRAFADRAAPLRARLIAALDRLDD 277 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10896.1270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10896.1270.1 >prot_Ecto-sp8_S_contig10896.1270.1 ID=prot_Ecto-sp8_S_contig10896.1270.1|Name=mRNA_Ecto-sp8_S_contig10896.1270.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=142bp MCRPLNPVQLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLADALback to top mRNA from alignment at Ecto-sp8_S_contig10896:5539..6289- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10896.1270.1 ID=mRNA_Ecto-sp8_S_contig10896.1270.1|Name=mRNA_Ecto-sp8_S_contig10896.1270.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=751bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10896:5539..6289- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10896:5539..6289- >mRNA_Ecto-sp8_S_contig10896.1270.1 ID=mRNA_Ecto-sp8_S_contig10896.1270.1|Name=mRNA_Ecto-sp8_S_contig10896.1270.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=426bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10896:5539..6289- (Ectocarpus species8 EcLAC_412)back to top |