mRNA_Ecto-sp8_S_contig10862.1246.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10862.1246.1 vs. uniprot
Match: A0A6H5L888_9PHAE (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L888_9PHAE) HSP 1 Score: 586 bits (1510), Expect = 3.170e-207 Identity = 290/375 (77.33%), Postives = 306/375 (81.60%), Query Frame = 1
Query: 1 MSAMTESATPACPSDGRKHPPTRRGIIVNVMVESADKFVDFMGKTTKAKVNLRLTDGGGYALSRRSRTSYLATPYTHNHRGFPVQEYFRFPDEDGKIMHLAVDIGGVALYVEELGNKMDTGAISTPHARLHLNTDDPAGVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKIFPFILVRDCPAYMTFLTDALGAEAVSPPDKAPTGKIMCAQMKINGGIIMVADQCDEDSA--EVAMTISYEIGKDEAAPLAKSFTDNGGEVLQPVSMQFWGQVWGRCKDPFGQPWGLCEVQEGPAPSKADMTKDMEMGAKYDWRYTWVIEDMPTVYCYGAISTSAANGPAISEETNKTLPA 1119
MSA T SATPA P DGRKHPPTRRGIIV+VMVESADKFVDFMGK KAK EYFRFPDEDGKIMHLA+DIGGVALYVEELGNKMDTGAISTPH RLHLNTDDPAGVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKI PF+ VRDC AYMTFLTDALGAE V PP K PTGKIMCA+MKINGGIIM+ D C +D++ E +MTI+YE+GKDEA PLAKSF DNGGEVL+ VSMQFWGQVWGRC DPFGQP LCEVQEGP PS DM KDME+GAKY+WRY WV+EDMP VYCYGA+STSAANGPAISEE NKTLPA
Sbjct: 1 MSATTGSATPASPCDGRKHPPTRRGIIVDVMVESADKFVDFMGKAAKAK------------------------------------EYFRFPDEDGKIMHLAIDIGGVALYVEELGNKMDTGAISTPHGRLHLNTDDPAGVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKIIPFVSVRDCSAYMTFLTDALGAEVVYPPAKDPTGKIMCAEMKINGGIIMLGDHCSKDASKTEASMTIAYEVGKDEAGPLAKSFKDNGGEVLEEVSMQFWGQVWGRCHDPFGQPXXLCEVQEGPPPSNEDMAKDMEIGAKYNWRYNWVVEDMPIVYCYGAMSTSAANGPAISEEINKTLPA 339
BLAST of mRNA_Ecto-sp8_S_contig10862.1246.1 vs. uniprot
Match: A0A6H5JNL3_9PHAE (AraC_E_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNL3_9PHAE) HSP 1 Score: 502 bits (1293), Expect = 3.680e-175 Identity = 237/278 (85.25%), Postives = 252/278 (90.65%), Query Frame = 1
Query: 292 MHLAVDIGGVALYVEELGNKMDTGAISTPHARLHLNTDDPAGVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKIFPFILVRDCPAYMTFLTDALGAEAVSPPDKAPTGKIMCAQMKINGGIIMVADQCDEDSA--EVAMTISYEIGKDEAAPLAKSFTDNGGEVLQPVSMQFWGQVWGRCKDPFGQPWGLCEVQEGPAPSKADMTKDMEMGAKYDWRYTWVIEDMPTVYCYGAISTSAANGPAISEETNKTLPA 1119
MHLA+DIGGVALYVEELGNKMDTGAISTPH RLHLNTDDPAGVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPK+LARKI PF+ VRDC AYMTF+TDALGAE V PP K PTGKIMCA++KINGGIIMV D C ED++ E +MTIS+E+GKDEA PLAKSF DNGGEVL+ VSMQFWGQVWGRCKDPFGQPWGLCEVQ GP S DM KDME+GAKYDWRYTW +EDMPTVYCYGA+STS A GPAISEETNKTLPA
Sbjct: 1 MHLAIDIGGVALYVEELGNKMDTGAISTPHGRLHLNTDDPAGVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKKLARKIIPFVSVRDCSAYMTFVTDALGAEVVYPPAKDPTGKIMCAELKINGGIIMVGDHCGEDASKTEASMTISHEVGKDEAGPLAKSFKDNGGEVLEEVSMQFWGQVWGRCKDPFGQPWGLCEVQTGPTTSNEDMAKDMEIGAKYDWRYTWAVEDMPTVYCYGAMSTSEATGPAISEETNKTLPA 278
BLAST of mRNA_Ecto-sp8_S_contig10862.1246.1 vs. uniprot
Match: D8LJ96_ECTSI (Glyoxalase family protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ96_ECTSI) HSP 1 Score: 382 bits (980), Expect = 5.660e-131 Identity = 187/195 (95.90%), Postives = 189/195 (96.92%), Query Frame = 1
Query: 1 MSAMTESATPACPSDGRKHPPTRRGIIVNVMVESADKFVDFMGKTTKAKVNLRLTDGGGYALSRRSRTSYLATPYTHNHRGFPVQEYFRFPDEDGKIMHLAVDIGGVALYVEELGNKMDTGAISTPHARLHLNTDDPAGVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKI 585
MSAMTESATPACPSDGRKHPPTRRGIIVNVMVESADKFVDFMGKTTKAK+ RLTDGGG ALSR SRTSYLA PYTHNHRGFPVQEYFRFPDEDGKIMHLA+DIGGVALYVEELGNKMDTGAISTPHARLHLNTDDP GVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKI
Sbjct: 1 MSAMTESATPACPSDGRKHPPTRRGIIVNVMVESADKFVDFMGKTTKAKI-WRLTDGGGDALSRPSRTSYLAAPYTHNHRGFPVQEYFRFPDEDGKIMHLAIDIGGVALYVEELGNKMDTGAISTPHARLHLNTDDPIGVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKI 194
BLAST of mRNA_Ecto-sp8_S_contig10862.1246.1 vs. uniprot
Match: D8LJ97_ECTSI (AraC family transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ97_ECTSI) HSP 1 Score: 246 bits (627), Expect = 2.530e-76 Identity = 112/140 (80.00%), Postives = 124/140 (88.57%), Query Frame = 1
Query: 706 MKINGGIIMVADQCDEDSA--EVAMTISYEIGKDEAAPLAKSFTDNGGEVLQPVSMQFWGQVWGRCKDPFGQPWGLCEVQEGPAPSKADMTKDMEMGAKYDWRYTWVIEDMPTVYCYGAISTSAANGPAISEETNKTLPA 1119
MKINGGI+M+ D C +D++ E +MT+SYE+ KDEA PLAKSF DNGGEVL+ VSMQFWGQVWGRCKDPFGQPWGLCEVQEGPAPS DM KDME+GAKYDW YTWV+EDMPTVYCYGA+STSAAN PAISEET KTLPA
Sbjct: 1 MKINGGIVMLGDHCSKDASKTEASMTVSYEVRKDEAGPLAKSFKDNGGEVLEEVSMQFWGQVWGRCKDPFGQPWGLCEVQEGPAPSNEDMAKDMEIGAKYDWHYTWVVEDMPTVYCYGAMSTSAANTPAISEETKKTLPA 140
BLAST of mRNA_Ecto-sp8_S_contig10862.1246.1 vs. uniprot
Match: UPI001556A403 (VOC family protein n=1 Tax=Pseudoruegeria sp. HB172150 TaxID=2721164 RepID=UPI001556A403) HSP 1 Score: 73.9 bits (180), Expect = 2.610e-12 Identity = 41/128 (32.03%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 568 ELARKIFPFILVRDCPAYMTFLTDALGAEAVSPPDKAPTGKIMCAQMKINGGIIMVADQCDE---DSAEVAMTISYEIGKDEAAPLAKSFTDNGGEVLQPVSMQFWGQVWGRCKDPFGQPWGLCEVQE 942
EL R + P++ ++D ++F A GAE + P GKIM A + IN G IM+ D + SA+ +++ ++ D+ + G EV Q ++FWG +GR +DPFG W + E E
Sbjct: 8 ELMRGVLPYLAIKDAADAISFYKVAFGAEMIGEPYADEQGKIMNASLAINDGTIMLMDNNEAYGIASAKGDRSMTLQLVVDDGTAWWNRALEAGCEVSQEYKLEFWGDYYGRIRDPFGLEWAILEPGE 135
BLAST of mRNA_Ecto-sp8_S_contig10862.1246.1 vs. uniprot
Match: UPI0018693315 (VOC family protein n=1 Tax=Mycolicibacterium baixiangningiae TaxID=2761578 RepID=UPI0018693315) HSP 1 Score: 73.6 bits (179), Expect = 4.120e-12 Identity = 37/111 (33.33%), Postives = 58/111 (52.25%), Query Frame = 1
Query: 238 RGFPVQEYFRFPDEDGKIMHLAVDIGGVALYVEELGNKMDTGAISTPHA------RLHLNTDDPAGVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNSTNTI 552
+ F EY R P++DGK++H A+DI G + + + + + G STP A +HL D + V+ GA L + EQFWG +G+ +DPFG +WS+ +
Sbjct: 27 KAFGATEYGRVPNQDGKLIHAALDINGSMVMLNDDFPEYNDGKPSTPTALGGSPVTIHLQVTDVDTKFQQAVDAGATVLMAVEEQFWGDRYGLLRDPFGHLWSMGQPVREV 137
BLAST of mRNA_Ecto-sp8_S_contig10862.1246.1 vs. uniprot
Match: L0DAF7_SINAD (VOC domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) TaxID=886293 RepID=L0DAF7_SINAD) HSP 1 Score: 70.1 bits (170), Expect = 8.400e-11 Identity = 45/144 (31.25%), Postives = 76/144 (52.78%), Query Frame = 1
Query: 547 TIEDVPKELARKIFPFILVRDCPAYMTFLTDALGA-EAVSPPDKAPTGKIMCAQMKINGGIIMVADQCDEDSAEVAMTI-----SYEIGKDEAAPLAKSFTDNGGEVLQPVSMQFWGQVWGRCKDPFGQPWGLCEVQEGPAPSK 960
+++ +PKE + P++++ D + F DALGA EA+ D P+GK+M A+++ING IM+AD+ E + MTI S + ++ G + +PV+ QF+G+ G +DPFG W + E +P +
Sbjct: 2 SVQPIPKEYTT-VTPYLILNDAAKAIAFYLDALGATEAMRLAD--PSGKVMHAEIRINGSPIMLADEFPEMGFKSPMTIGGSPVSLHLYVEDVDAFVDRAVKAGATLTRPVANQFYGERSGGFEDPFGHVWHIATRVEDLSPEE 142
BLAST of mRNA_Ecto-sp8_S_contig10862.1246.1 vs. uniprot
Match: F6EQM7_HOYSD (Conserved protein n=2 Tax=Hoyosella TaxID=697025 RepID=F6EQM7_HOYSD) HSP 1 Score: 69.3 bits (168), Expect = 1.100e-10 Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = 1
Query: 250 VQEYFRFPDEDGKIMHLAVDIGGVALYVEEL-GNKMDTGAISTPHARLHLNTDDPAGVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKI 585
+E R+ D DG+I+H V IGGV + V++ G ++ L L TDD V +++EHGA + + +QF+G G DPFG +W V+ + + P E+ R +
Sbjct: 29 AEERCRYTDNDGRIVHSEVVIGGVTVAVKDADGTDPSPDNVNGTPVILALYTDDAKAVADRMMEHGATVIFPVRDQFYGERAGRLADPFGHVWMVAQKSGDLS--PDEIQRTL 139
BLAST of mRNA_Ecto-sp8_S_contig10862.1246.1 vs. uniprot
Match: A0A0F2P6N2_9HYPH (VOC domain-containing protein n=1 Tax=Hoeflea sp. BRH_c9 TaxID=1629712 RepID=A0A0F2P6N2_9HYPH) HSP 1 Score: 69.3 bits (168), Expect = 1.100e-10 Identity = 40/132 (30.30%), Postives = 63/132 (47.73%), Query Frame = 1
Query: 565 KELARKIFPFILVRDCPAYMTFLTDALGAEAVSPPDKAPTGKIMCAQMKINGGIIMVADQCDEDSAEVAMTISY---------EIGKDEAAPLAKSFTDNGGEVLQPVSMQFWGQVWGRCKDPFGQPWGLCE 933
K L R + P+ V + F T A GA A P ++ G+++ A ++INGG++M+ D E ++ + ++ ++ D A G EVL P ++FWG WGR +DPFG W E
Sbjct: 8 KRLMRGVIPYATVDGVDKAIEFYTRAFGAVAHGEPVRSEDGRVLNASIEINGGMVMLMDPFPEHGSQPSAGSNFLLQLVIADGDLWWDRAVKA-------GCEVLSPFKLEFWGDRWGRVRDPFGLEWAFNE 132
BLAST of mRNA_Ecto-sp8_S_contig10862.1246.1 vs. uniprot
Match: A0A2V9UEF3_9BACT (Glyoxalase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9UEF3_9BACT) HSP 1 Score: 68.6 bits (166), Expect = 3.000e-10 Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 1
Query: 550 IEDVPKELARKIFPFILVRDCPAYMTFLTDALGAEAVSPPDKAPTGKIMCAQMKINGGIIMVADQCDEDSAEVAMTIS-YEIGKDEAAPLAKSFTDN----GGEVLQPVSMQFWGQVWGRCKDPFGQPWGL 927
++ VP E + PF+ V+DC + F A GA+A K P+GK+M A++KI I+M+AD+ + A ++ +G P + D G +V PV QFWG +G+ KDPFG W +
Sbjct: 3 VKPVP-ECYHTLTPFMTVKDCTRAIEFYQQAFGAQARGVA-KDPSGKVMHAEIKIGDSIVMMADEFPDFGALSPESVGGSSMGLHIYVPDVDAAFDRAVKAGAKVEMPVMDQFWGDRYGKLKDPFGHKWSI 131 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10862.1246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10862.1246.1 >prot_Ecto-sp8_S_contig10862.1246.1 ID=prot_Ecto-sp8_S_contig10862.1246.1|Name=mRNA_Ecto-sp8_S_contig10862.1246.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=373bp MSAMTESATPACPSDGRKHPPTRRGIIVNVMVESADKFVDFMGKTTKAKVback to top mRNA from alignment at Ecto-sp8_S_contig10862:11..4146- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10862.1246.1 ID=mRNA_Ecto-sp8_S_contig10862.1246.1|Name=mRNA_Ecto-sp8_S_contig10862.1246.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4136bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10862:11..4146- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10862:11..4146- >mRNA_Ecto-sp8_S_contig10862.1246.1 ID=mRNA_Ecto-sp8_S_contig10862.1246.1|Name=mRNA_Ecto-sp8_S_contig10862.1246.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1119bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10862:11..4146- (Ectocarpus species8 EcLAC_412)back to top |