mRNA_Ecto-sp8_S_contig10858.1243.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10858.1243.1 vs. uniprot
Match: D8LSN8_ECTSI (WD-40 repeat family protein / mitotic checkpoint protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN8_ECTSI) HSP 1 Score: 213 bits (542), Expect = 7.810e-67 Identity = 103/106 (97.17%), Postives = 104/106 (98.11%), Query Frame = 1
Query: 112 STLRLYDARQNLSKRVIPSKMAQLDCCFKDTSDTGFSGGLDKQVKQVDLETGAVTLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRSKQALVQSRPAPGKV 429
+TLRLYDARQNLSKRVIPSKMAQLDCCFKDTS TGF GGLDKQVKQVDLETGAVTLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRSKQALVQSRPAPGKV
Sbjct: 2 TTLRLYDARQNLSKRVIPSKMAQLDCCFKDTSATGFCGGLDKQVKQVDLETGAVTLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRSKQALVQSRPAPGKV 107
BLAST of mRNA_Ecto-sp8_S_contig10858.1243.1 vs. uniprot
Match: A0A7S1CBP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBP7_9STRA) HSP 1 Score: 141 bits (355), Expect = 4.880e-38 Identity = 71/141 (50.35%), Postives = 90/141 (63.83%), Query Frame = 1
Query: 10 AGNNEMQLSDPPTDGISAVCFAPASDLLLASSWDSTLRLYDARQNLS-KRVIPSKMAQLDCCFKDTSDTGFSGGLDKQVKQVDLETGAVTLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRSKQALVQSRPAPGKV 429
A +++QL+ PPTDGISA+ FAP SDLLLASSWD+ +RLYDAR N K + A LDC D + T +SGGLD+ V D T +T LG HD AVRCV ++ G V+T GWD+ + WDPR+ AL + PGK
Sbjct: 57 AAMSQVQLAGPPTDGISALSFAPTSDLLLASSWDTGVRLYDARANTGPKTTYHHRAAVLDCALADDT-TAYSGGLDQAVTAYDTATETMTSLGEHDDAVRCVAHSRDLGAVVTAGWDSTMRVWDPRASDALQHTAALPGKA 196
BLAST of mRNA_Ecto-sp8_S_contig10858.1243.1 vs. uniprot
Match: A0A4P9W425_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W425_9FUNG) HSP 1 Score: 140 bits (353), Expect = 6.050e-38 Identity = 71/144 (49.31%), Postives = 89/144 (61.81%), Query Frame = 1
Query: 1 MSSAGNNEMQLSDPPTDGISAVCFAPAS-DLLLASSWDSTLRLYDARQNLSKRVIPSKMAQLDCCFKDTSDTGFSGGLDKQVKQVDLETGAVTLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRSKQALVQSRPAPGKV 429
M AG + +L DPPTDGI++V F+P LLL SWD +RLYD N + PSK A LD F D S GFS GLD+++K VDL T T+LGSHD A+RCVEY TG ++TG WD + WDPRS ++V P K+
Sbjct: 1 MQGAGVEQFELHDPPTDGITSVVFSPDDPSLLLVGSWDKHVRLYDVVANQLRLKYPSKAAVLDVAFSD-SVHGFSAGLDRRLKMVDLHTTTETILGSHDDAIRCVEYCKETGNIITGSWDKTVRVWDPRSNDSVVGKYMQPAKI 143
BLAST of mRNA_Ecto-sp8_S_contig10858.1243.1 vs. uniprot
Match: A0A7S2UWG3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWG3_9STRA) HSP 1 Score: 134 bits (337), Expect = 8.540e-36 Identity = 64/120 (53.33%), Postives = 80/120 (66.67%), Query Frame = 1
Query: 70 FAPASDLLLASSWDSTLRLYDARQNLSKRVIPSKMAQLDCCFKDTSDTGFSGGLDKQVKQVDLETGAVTLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRSKQALVQSRPAPGKV 429
F P+S+ LLASSWDS + LYDA N+ P K A LDCCF D GF GGLD+ +K D G+ ++LGSH+ A+RCVE++ +G V TGGWD ++ AWDPRS VQS P PGKV
Sbjct: 2 FGPSSNNLLASSWDSCVYLYDAGANVRLASFPCKAAVLDCCFWDPQH-GFCGGLDRSLKMFDFNNGSESVLGSHNGAIRCVEFSLHSGLVFTGGWDGQMLAWDPRSPSPCVQSLPQPGKV 120
BLAST of mRNA_Ecto-sp8_S_contig10858.1243.1 vs. uniprot
Match: A0A8H7Q701_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q701_MORIS) HSP 1 Score: 130 bits (328), Expect = 3.290e-34 Identity = 61/140 (43.57%), Postives = 90/140 (64.29%), Query Frame = 1
Query: 13 GNNEMQLSDPPTDGISAVCFAPA-SDLLLASSWDSTLRLYDARQNLSKRVIPSKMAQLDCCFKDTSDTGFSGGLDKQVKQVDLETGAVTLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRSKQALVQSRPAPGKV 429
G N+ ++++PP DGIS V FAP S LLL SSWD T+ +Y+ +N K+ + A LDCCF ++D +SGG+D+ V++++++TG LGSHD AV+C ++ T + TG WD + WDPRS +AL + P KV
Sbjct: 4 GANQFEIANPPADGISRVTFAPEDSSLLLVSSWDKTVNVYNVEENALKQKFEHQAAVLDCCFS-SNDRAYSGGVDRTVRELEIDTGNSRALGSHDDAVKCTNWSDLTNLLFTGSWDKTIRTWDPRSGEALQGTYHQPHKV 142
BLAST of mRNA_Ecto-sp8_S_contig10858.1243.1 vs. uniprot
Match: A0A7S2RA99_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RA99_9STRA) HSP 1 Score: 130 bits (326), Expect = 6.780e-34 Identity = 68/134 (50.75%), Postives = 90/134 (67.16%), Query Frame = 1
Query: 31 LSDPPTDGISAVCFAPASDLLLASSWDSTLRLYDARQNLSKRVIPSKMAQLDCCFKDTSDTGFSGGLDKQVKQVDLETGAV-TLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRSKQALVQSRPAPGKV 429
LS PPTDGISAV FAP++++LLASSWD+ LRLYDA QN + ++ LD CF D S G +GGLD V+ DL G+V T++G+H K V+CV + A+ + +GGWDA ++AWD RS + S PGKV
Sbjct: 20 LSSPPTDGISAVKFAPSTNVLLASSWDAKLRLYDAAQNRLLHALDTQAVGLDACFIDNSH-GVTGGLDGSVRTYDLNQGSVSTVVGTHAKGVKCVSHCAAHELLFSGGWDACVHAWDTRSGVSKTASLQLPGKV 152
BLAST of mRNA_Ecto-sp8_S_contig10858.1243.1 vs. uniprot
Match: A0A6A4VH23_AMPAM (Mitotic checkpoint protein BUB3 n=4 Tax=Thoracicalcarea TaxID=2899756 RepID=A0A6A4VH23_AMPAM) HSP 1 Score: 128 bits (321), Expect = 3.170e-33 Identity = 65/140 (46.43%), Postives = 85/140 (60.71%), Query Frame = 1
Query: 1 MSSAGNNEMQLSDPPTDGISAVCFAP-ASDLLLASSWDSTLRLYDARQNLSKRVIPSKMAQLDCCFKDTSDTGFSGGLDKQVKQVDLETGAVTLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRSKQAL-VQSRP 414
M+ A +E++L+ PP DGISAV F P +S LL SSWDST+RLYD N + LDCCF D +SGGLD+Q+K D T T++G H +RCVEY A G V+TGGWD + WDPR ++ V ++P
Sbjct: 1 MADASRSELKLNSPPEDGISAVKFGPTSSQFLLVSSWDSTVRLYDVVSNTQRLQYSHSAPVLDCCFHDAVHA-WSGGLDQQLKVFDFNTSTETVVGQHGAPIRCVEYAAEAGVVVTGGWDNYVKLWDPRQQRGTGVHAQP 139
BLAST of mRNA_Ecto-sp8_S_contig10858.1243.1 vs. uniprot
Match: A0A250WQ80_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WQ80_9CHLO) HSP 1 Score: 127 bits (320), Expect = 5.430e-33 Identity = 66/136 (48.53%), Postives = 88/136 (64.71%), Query Frame = 1
Query: 28 QLSDPPTDGISAVCFAPASDLLLASSWDSTLRLYDARQNLSKRVIPSKMAQLDCCFKDTSDTGFSGGLDKQVKQVDLETGAVTLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRS--KQALVQSRPAPGKV 429
+L PPTDGIS V F+ SDLL+ASSWD T+RLYD QN+++ VI + LD C +D + GFSG LD QVK++ + + + LG H AVRC+++ S G VLTG WD+ + AWDPR+ +Q PGKV
Sbjct: 10 KLVSPPTDGISGVKFSIYSDLLIASSWDKTVRLYDGAQNIARGVIEQQAPVLDICLQDDT-CGFSGSLDGQVKRLSFQDLSSSPLGYHQTAVRCIQFLPSRGLVLTGSWDSTVRAWDPRAPPQQVCASVINLPGKV 144
BLAST of mRNA_Ecto-sp8_S_contig10858.1243.1 vs. uniprot
Match: V4B165_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B165_LOTGI) HSP 1 Score: 127 bits (318), Expect = 8.620e-33 Identity = 58/124 (46.77%), Postives = 83/124 (66.94%), Query Frame = 1
Query: 19 NEMQLSDPPTDGISAVCFAP-ASDLLLASSWDSTLRLYDARQNLSKRVIPSKMAQLDCCFKDTSDTGFSGGLDKQVKQVDLETGAVTLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRS 387
+E +L +PP+DGISA+ F P +S LL SSWD+T+RLYD N + + LDCCF+D+ + FSGG+DK +K D T T++G+HD+AV+CVE+ A ++TG WD+ + WDPRS
Sbjct: 6 SEFKLKNPPSDGISAIKFGPTSSQFLLVSSWDTTVRLYDIISNNQRMIYSHTDPVLDCCFQDSVHS-FSGGIDKTLKMYDFNTQTETVVGTHDRAVKCVEFGADVNVIVTGSWDSTVKLWDPRS 128
BLAST of mRNA_Ecto-sp8_S_contig10858.1243.1 vs. uniprot
Match: H2Y738_CIOSA (Uncharacterized protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Y738_CIOSA) HSP 1 Score: 126 bits (317), Expect = 1.290e-32 Identity = 66/138 (47.83%), Postives = 88/138 (63.77%), Query Frame = 1
Query: 19 NEMQLSDPPTDGISAVCFAPA-SDLLLASSWDSTLRLYDARQNLSKRVIPSKMAQLDCCFKDTSDTGFSGGLDKQVKQVDLETGAVTLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRSKQALVQSRPAPGKV 429
NE QL++ P DGIS+V F+P+ S LLASSWDS++RLYD +N + K LDCCF D+ +SGGLD V DL +G T++G H+ ++RC+EY A T V+TG WD + WDPR+ Q + S PGKV
Sbjct: 3 NEYQLNNCPNDGISSVKFSPSTSQFLLASSWDSSVRLYDVTENSQRFKYKHKSPVLDCCFSDSVHV-WSGGLDGCVLMYDLNSGRETMVGRHNNSIRCMEYCADTNVVVTGSWDQTIKLWDPRA-QNNIGSYSQPGKV 138 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10858.1243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10858.1243.1 >prot_Ecto-sp8_S_contig10858.1243.1 ID=prot_Ecto-sp8_S_contig10858.1243.1|Name=mRNA_Ecto-sp8_S_contig10858.1243.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=143bp MSSAGNNEMQLSDPPTDGISAVCFAPASDLLLASSWDSTLRLYDARQNLSback to top mRNA from alignment at Ecto-sp8_S_contig10858:92..4872- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10858.1243.1 ID=mRNA_Ecto-sp8_S_contig10858.1243.1|Name=mRNA_Ecto-sp8_S_contig10858.1243.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4781bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10858:92..4872- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10858:92..4872- >mRNA_Ecto-sp8_S_contig10858.1243.1 ID=mRNA_Ecto-sp8_S_contig10858.1243.1|Name=mRNA_Ecto-sp8_S_contig10858.1243.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=429bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10858:92..4872- (Ectocarpus species8 EcLAC_412)back to top |