mRNA_Ecto-sp8_S_contig10844.1232.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10844.1232.1
Unique NamemRNA_Ecto-sp8_S_contig10844.1232.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10844.1232.1 vs. uniprot
Match: D7FXU4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU4_ECTSI)

HSP 1 Score: 713 bits (1840), Expect = 2.590e-232
Identity = 467/555 (84.14%), Postives = 474/555 (85.41%), Query Frame = 2 
Query:  434 QYELDEEARREERERKKRWRSLEDKGDLELSIREASEVALPTLPSRDWLRQVRALVAAENRAREEATVCAVYREALALEIDGVFSGDRSLSGSSFFSGLYGGDPDDDRASVASTACTAVSDREGVHTTGAAXXXXXXXGIQQNQSRGAPPGDGSGGGGSLPRQAVKAASNYDPALLRQLQARLTSLRDARERLHGPLARAVEESSKKLLESVESFSAKFAASPHEHIGGGVQRLGGAESKRDKGATSATAGAG--GRGEMGEAASRRQDTKNRAEARKSEGVRALALIRRQVVARGCQTRQQRGSGTVTSVNGEAALDAAGQPIAAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAASMAATVANTLPARAADAEALCPAALVIARAVEAVLCGTTASFAGTDGDSGGGESEGRGGLNSPETAAPPSATAELVTTIAAGEEKREDVEMVADGGDGSQAERKQYRETLEGLAKALGTLRKALEAAAGHSKPSLAISSASADEAAGVDRVSRTQGPSNDQAGGGSSGGDGRTVTEGGARA 2092
            Q  LDE        RKKRWR+LEDKGDLELSIREASEVALPTLPSRDWLRQVRALVAAENRAREEATVC VYREALALEIDGVFSGDRSLSGSSFFSGLYGGDPDDDRASVASTACTAVSDREGV  T   XXXXXXX                    SLPRQAVKAAS+YDPALLRQLQARLTSLRDARERLHGPLARAVEESSKKLLESVESFSAKFAASPHEHIGGGVQRLGGAESK D+GA S TAG G   RGE GEAASRR      AEARKSEGVRALALIRRQVVARG QTRQQRGSGTVTSVNGEAALDAAG+PIAAAIXXXXXXXXXXXXXXXXXXXXX                     EAAASMAATV NTLPARAADAEALCPAALVIARAVEAVLCGTTASFAGTDGDSGGGESEGRGGLNSPETAAPPSATA+LV T  AGEEKRE+VEMVADG DGSQAERKQYRETLEGL KALGTLRKALEAAAGH KPSLAISSASADE AGVDRVSRTQGPSNDQAGGGS+GGDGR VTEGGARA
Sbjct:  486 QXXLDEXXXXXXXXRKKRWRALEDKGDLELSIREASEVALPTLPSRDWLRQVRALVAAENRAREEATVCTVYREALALEIDGVFSGDRSLSGSSFFSGLYGGDPDDDRASVASTACTAVSDREGVLITSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPRQAVKAASSYDPALLRQLQARLTSLRDARERLHGPLARAVEESSKKLLESVESFSAKFAASPHEHIGGGVQRLGGAESKGDEGAASGTAGPGPGARGETGEAASRR------AEARKSEGVRALALIRRQVVARGRQTRQQRGSGTVTSVNGEAALDAAGKPIAAAIXXXXXXXXXXXXXXXXXXXXXWRTRPANGAPGRTGGGIGAEAEAAASMAATVGNTLPARAADAEALCPAALVIARAVEAVLCGTTASFAGTDGDSGGGESEGRGGLNSPETAAPPSATAKLVATNVAGEEKREEVEMVADGEDGSQAERKQYRETLEGLGKALGTLRKALEAAAGHDKPSLAISSASADEPAGVDRVSRTQGPSNDQAGGGSTGGDGRNVTEGGARA 1034
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BLAST of mRNA_Ecto-sp8_S_contig10844.1232.1 vs. uniprot
Match: A0A6H5KDI0_9PHAE (Kinesin-like protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI0_9PHAE)

HSP 1 Score: 643 bits (1658), Expect = 1.270e-217
Identity = 448/575 (77.91%), Postives = 465/575 (80.87%), Query Frame = 2 
Query:  509 GDLELSIREASEVALPTLPSRDWLRQVRALVAAENRAREEATVCAVYREALALEIDGVFSGDRSLSGSSFFSGLYGGDPDDDRASVASTACTAVSDREGVHTTGAAXXXXXXXGIQQNQSRGAPPGDGSGGGGSLPRQAVKAASNYDPALLRQLQARLTSLRDARERLHGPLARAVEESSKKLLESVESFSAKFAASPHEHIGGGVQRLGGAESKRDKGATS----------------------ATAGAGGRGEMGEAASRRQDTKNR-------------------------AEARKSEGVRALALIRRQVVARGCQTRQQRGSGTVTSVNGEAALDAAGQPIAAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAASMAATVANTLPARAADAEALCPAALVIARAVEAVLCGTTASFAGTDGDSGGGESEGRGGLNSPETAAPPSATAELVTTIAAGEEKREDVEMVADGGDGSQAERKQYRETLEGLAKALGTLRKALEAAAGHSKPSLAISSASADEAAGVDRVSRTQGPSNDQAGGGSSGGDGRTVTEGGARA 2092
            GDLELSIREASEVALPTLPSRDWLRQVRALVAAENRAREEATVCAVYREALALEIDGVFSGDRSLSGSSFFSGLYGG+PDDDRASVASTACTAVSDREGV TTGA        G+ QNQSR A PGDGSGGGGSLPRQAVK AS+YDPALLRQLQARLTSLRDARERLHGPLARAVEESSKKLLESVESFSAKFAASPHEHIGGGVQR GGAE+     A +                       T     R +  +   +RQ  + +                         AEARKSEGVRALALIRRQVVARG QTRQQRG G  TS NGEAALDAAGQPIA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      AAT ANTLPARA DAEALCPAA+VIARAVEA+LCGTTASFAGTDGDSGG ESEGRGG+NSPETAA  SATAELV T AAG EKREDVEMVADGGDGSQAERKQYRETL+GL KALGTLR+AL+AAAGHS PSLA+SSAS DEAAGVDRVSRTQG SNDQAGG SSGGDGR VTEGGARA
Sbjct:  263 GDLELSIREASEVALPTLPSRDWLRQVRALVAAENRAREEATVCAVYREALALEIDGVFSGDRSLSGSSFFSGLYGGEPDDDRASVASTACTAVSDREGVLTTGAVAAAGDNEGMHQNQSRDAAPGDGSGGGGSLPRQAVKTASSYDPALLRQLQARLTSLRDARERLHGPLARAVEESSKKLLESVESFSAKFAASPHEHIGGGVQRRGGAEAADGVAAAAKVLLSKVGVNLLPSSSVMTIDFVTC----RAKATKVRHQRQQEEEQEERWGRLHPEGKTPIASDIEAGMSPAEARKSEGVRALALIRRQVVARGRQTRQQRGFGNATSGNGEAALDAAGQPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATAANTLPARA-DAEALCPAAVVIARAVEAILCGTTASFAGTDGDSGGDESEGRGGVNSPETAASSSATAELVATNAAGNEKREDVEMVADGGDGSQAERKQYRETLDGLGKALGTLREALKAAAGHSTPSLAVSSASVDEAAGVDRVSRTQGSSNDQAGGSSSGGDGRNVTEGGARA 832
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BLAST of mRNA_Ecto-sp8_S_contig10844.1232.1 vs. uniprot
Match: A0A7S3Y1V5_HETAK (Kinesin-like protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1V5_HETAK)

HSP 1 Score: 105 bits (262), Expect = 1.150e-20
Identity = 70/135 (51.85%), Postives = 85/135 (62.96%), Query Frame = 1 
Query:    1 LTAMLAALSPAACNFEETLSTLKYASRAKSIKVNAVKNEEASQVSRLEEEVRALKQKLLAHEQQTASMSSXXXXXXXXXXXXXXXXXXXTSAATAGEGVAEGSGGGDRYKQQIAEMEAAMKSTWEEKAKQSESSE 405
            LT+MLAALSPAACNFEETL TLKYASRAK+IKVNAVKNEEASQ+S+L EE+ ALK++L                               T  A + E  A       RYKQQ+A+++AA+KSTWE+KAK S + E
Sbjct:  248 LTSMLAALSPAACNFEETLGTLKYASRAKTIKVNAVKNEEASQISKLNEEITALKERLAQQ----------------------------TQTAVSAEAEA-------RYKQQLADLDAALKSTWEDKAKLSAAHE 347
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BLAST of mRNA_Ecto-sp8_S_contig10844.1232.1 vs. uniprot
Match: A0A812Y6X6_SYMMI (Kinesin-like protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y6X6_SYMMI)

HSP 1 Score: 93.6 bits (231), Expect = 6.780e-17
Identity = 65/139 (46.76%), Postives = 83/139 (59.71%), Query Frame = 1 
Query:    1 LTAMLAALSPAACNFEETLSTLKYASRAKSIKVNAVKNEEASQVSRLEEEVRALKQKLLAHEQQTASMSSXXXXXXXXXXXXXXXXXXXTSAATAGEGVAEGSGGGDRYKQQIAEMEAAMKSTWEEKAKQSESSERERQ 417
            +T M+AALSPA  NFEETLSTLKYA+RAK IKV AVKN+E+SQ+SRL EE+RAL++KL+                              TS   A            +++QQ+ ++E AMKSTWE+KA+ SE  ERERQ
Sbjct:  258 VTVMIAALSPALVNFEETLSTLKYANRAKDIKVKAVKNDESSQISRLNEEIRALREKLV-----------------------------DTSMLEA------------KHQQQLRDLEEAMKSTWEDKARISEEHERERQ 355
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BLAST of mRNA_Ecto-sp8_S_contig10844.1232.1 vs. uniprot
Match: A0A7S2Q7J3_9DINO (Kinesin-like protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2Q7J3_9DINO)

HSP 1 Score: 83.6 bits (205), Expect = 1.210e-13
Identity = 62/141 (43.97%), Postives = 81/141 (57.45%), Query Frame = 1 
Query:    1 LTAMLAALSPAACNFEETLSTLKYASRAKSIKVNAVKNEEASQVSRLEEEVRALKQKLLAHEQQTASMSSXXXXXXXXXXXXXXXXXXXTSAATAGEGVAEGSGGGDRYKQQIAEMEAAMKSTWEEKAKQSESSERERQRL 423
            L  MLA LSPAACN+EET+STL+YA+RAK+IKV+A KNEEASQ+SRL+ EV  LK+KL        S S                         AG   AE      ++++Q+ EME  M ++W EKAK SE  ++  +RL
Sbjct:  215 LCTMLATLSPAACNYEETMSTLRYANRAKAIKVSATKNEEASQISRLKAEVEELKRKL--------STSGAGGV-----------------GGAAGLTDAEREAERQKFERQLKEMEGLMNNSWGEKAKISEEHQQRMKRL 330
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BLAST of mRNA_Ecto-sp8_S_contig10844.1232.1 vs. uniprot
Match: A0A1W0ACN5_9STRA (Kinesin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ACN5_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.370e-13
Identity = 66/141 (46.81%), Postives = 84/141 (59.57%), Query Frame = 1 
Query:    1 LTAMLAALSPAACNFEETLSTLKYASRAKSIKVNAVKNEEASQVSRLEEEVRALKQKLLAHEQQTASMSSXXXXXXXXXXXXXXXXXXXTSAATAGEGVAEGSGGGDRYKQQIAEMEAAMKSTWEEKAKQSESSERERQRL 423
            L +MLA LSPA  NF ETL TLKYASRAKSIKVNA KNEEASQ+S+L EE+ ALK++L+  EQQ+ S+                            E +A       R+++QI EM+A    TWE+KAK S+  E ER++L
Sbjct:  299 LCSMLATLSPANINFIETLGTLKYASRAKSIKVNAKKNEEASQISQLNEEIAALKKRLM--EQQSTSVDPLEKN----------------------EMIA-------RFEKQIQEMDAVRMQTWEDKAKLSKQHELERKKL 408
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BLAST of mRNA_Ecto-sp8_S_contig10844.1232.1 vs. uniprot
Match: A0A7S4QW74_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QW74_9DINO)

HSP 1 Score: 85.9 bits (211), Expect = 1.710e-13
Identity = 64/144 (44.44%), Postives = 78/144 (54.17%), Query Frame = 1 
Query:    1 LTAMLAALSPAACNFEETLSTLKYASRAKSIKVNAVKNEEASQVSRLEEEVRALKQKLLAHEQQTASMSSXXXXXXXXXXXXXXXXXXXTSAATAGEGVAEGSGGGDRYKQQIAEMEAAMKSTWEEKAKQSESSERERQRLQQQ 432
            LT M+AALSP+  N +ETLSTL YA RAK+IKVNA KNEEA  +++LEEEV ALKQKL                                  A    GVA+ S    RY+ QI EME  MK TWE+K   +   E ER+ L++Q
Sbjct:  331 LTTMMAALSPSKTNADETLSTLNYAKRAKTIKVNATKNEEAEHIAKLEEEVEALKQKL----------------------------------AEQASGVADTS----RYQSQIDEMEKFMKQTWEDKENATRKHEEERKALEEQ 436
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BLAST of mRNA_Ecto-sp8_S_contig10844.1232.1 vs. uniprot
Match: T0RP34_SAPDV (Uncharacterized protein n=4 Tax=Saprolegnia TaxID=4769 RepID=T0RP34_SAPDV)

HSP 1 Score: 85.9 bits (211), Expect = 1.820e-13
Identity = 66/141 (46.81%), Postives = 84/141 (59.57%), Query Frame = 1 
Query:    1 LTAMLAALSPAACNFEETLSTLKYASRAKSIKVNAVKNEEASQVSRLEEEVRALKQKLLAHEQQTASMSSXXXXXXXXXXXXXXXXXXXTSAATAGEGVAEGSGGGDRYKQQIAEMEAAMKSTWEEKAKQSESSERERQRL 423
            L +MLA LSPA  NF ETL TLKYASRAKSIKVNA KNEEASQ+S+L EE+ ALK++L+  EQQ+ S+                            E +A       R+++QI EM+A    TWE+KAK S+  E ER++L
Sbjct:  314 LCSMLATLSPANINFIETLGTLKYASRAKSIKVNAKKNEEASQISQLNEEIAALKKRLM--EQQSISVDP----------------------VEKNEMIA-------RFEKQIQEMDAVRLQTWEDKAKLSKQHELERKKL 423
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BLAST of mRNA_Ecto-sp8_S_contig10844.1232.1 vs. uniprot
Match: A0A1V9ZU70_9STRA (Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZU70_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.820e-13
Identity = 66/141 (46.81%), Postives = 84/141 (59.57%), Query Frame = 1 
Query:    1 LTAMLAALSPAACNFEETLSTLKYASRAKSIKVNAVKNEEASQVSRLEEEVRALKQKLLAHEQQTASMSSXXXXXXXXXXXXXXXXXXXTSAATAGEGVAEGSGGGDRYKQQIAEMEAAMKSTWEEKAKQSESSERERQRL 423
            L +MLA LSPA  NF ETL TLKYASRAKSIKVNA KNEEASQ+S+L EE+ ALK++L+  EQQ+ S+                            E +A       R+++QI EM+A    TWE+KAK S+  E ER++L
Sbjct:  316 LCSMLATLSPANINFIETLGTLKYASRAKSIKVNAKKNEEASQISQLNEEIAALKKRLM--EQQSTSVDP----------------------VEKSEIIA-------RFEKQIQEMDAVRLQTWEDKAKLSKQHELERKKL 425
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BLAST of mRNA_Ecto-sp8_S_contig10844.1232.1 vs. uniprot
Match: H3HE53_PHYRM (Kinesin-like protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HE53_PHYRM)

HSP 1 Score: 84.7 bits (208), Expect = 3.340e-13
Identity = 63/141 (44.68%), Postives = 79/141 (56.03%), Query Frame = 1 
Query:    1 LTAMLAALSPAACNFEETLSTLKYASRAKSIKVNAVKNEEASQVSRLEEEVRALKQKLLAHEQQTASMSSXXXXXXXXXXXXXXXXXXXTSAATAGEGVAEGSGGGDRYKQQIAEMEAAMKSTWEEKAKQSESSERERQRL 423
            L +MLA LSPA+ NF ETLSTLKYASRAKSIKVNA KNE +SQ+S+L EE+ ALKQKL   +Q  A+M                                       +Y++QI EM+     TWE+KAK S+  E ER++L
Sbjct:  320 LCSMLATLSPASINFSETLSTLKYASRAKSIKVNAKKNEASSQISQLNEEIAALKQKL--QDQMEATMGLDPKEKDDIVM---------------------------KYEKQIQEMDRVRLQTWEDKAKLSKQHEMERKKL 431
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10844.1232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXU4_ECTSI2.590e-23284.14Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KDI0_9PHAE1.270e-21777.91Kinesin-like protein (Fragment) n=1 Tax=Ectocarpus... [more]
A0A7S3Y1V5_HETAK1.150e-2051.85Kinesin-like protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A812Y6X6_SYMMI6.780e-1746.76Kinesin-like protein n=1 Tax=Symbiodinium microadr... [more]
A0A7S2Q7J3_9DINO1.210e-1343.97Kinesin-like protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A1W0ACN5_9STRA1.370e-1346.81Kinesin n=1 Tax=Thraustotheca clavata TaxID=74557 ... [more]
A0A7S4QW74_9DINO1.710e-1344.44Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
T0RP34_SAPDV1.820e-1346.81Uncharacterized protein n=4 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZU70_9STRA1.820e-1346.81Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID... [more]
H3HE53_PHYRM3.340e-1344.68Kinesin-like protein n=1 Tax=Phytophthora ramorum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10844contigEcto-sp8_S_contig10844:2..6691 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score381.3
Seed ortholog evalue4e-103
Seed eggNOG ortholog2880.D7FXU4
Preferred nameTRAF3IP1
Model size2092
KEGG koko:K10392,ko:K19680
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0001654,GO:0001655,GO:0001738,GO:0001817,GO:0001818,GO:0001822,GO:0001932,GO:0001933,GO:0002009,GO:0002119,GO:0002164,GO:0002682,GO:0002683,GO:0002697,GO:0002698,GO:0002831,GO:0002832,GO:0003002,GO:0003008,GO:0003674,GO:0005102,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0005930,GO:0006355,GO:0006357,GO:0006810,GO:0006928,GO:0006935,GO:0006950,GO:0006970,GO:0006972,GO:0006996,GO:0007017,GO:0007018,GO:0007275,GO:0007389,GO:0007399,GO:0007423,GO:0007507,GO:0007610,GO:0007611,GO:0007612,GO:0008017,GO:0008092,GO:0008104,GO:0008150,GO:0008306,GO:0008589,GO:0009605,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010563,GO:0010605,GO:0010629,GO:0010646,GO:0010648,GO:0010970,GO:0015630,GO:0015631,GO:0016043,GO:0019219,GO:0019220,GO:0019222,GO:0021532,GO:0021915,GO:0022414,GO:0022607,GO:0022611,GO:0023051,GO:0023057,GO:0030030,GO:0030031,GO:0030326,GO:0030705,GO:0030990,GO:0030992,GO:0031076,GO:0031110,GO:0031113,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0031347,GO:0031348,GO:0031399,GO:0031400,GO:0031503,GO:0032101,GO:0032102,GO:0032268,GO:0032269,GO:0032271,GO:0032479,GO:0032480,GO:0032501,GO:0032502,GO:0032504,GO:0032648,GO:0032688,GO:0032838,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0035050,GO:0035107,GO:0035108,GO:0035113,GO:0035295,GO:0035735,GO:0035869,GO:0036064,GO:0036342,GO:0040011,GO:0040024,GO:0042073,GO:0042221,GO:0042325,GO:0042326,GO:0042330,GO:0042509,GO:0042532,GO:0042592,GO:0042733,GO:0042995,GO:0043009,GO:0043010,GO:0043053,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043900,GO:0043901,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045184,GO:0045879,GO:0045892,GO:0045934,GO:0045936,GO:0045992,GO:0045995,GO:0046425,GO:0046426,GO:0046907,GO:0048513,GO:0048519,GO:0048523,GO:0048568,GO:0048583,GO:0048585,GO:0048598,GO:0048609,GO:0048729,GO:0048731,GO:0048736,GO:0048793,GO:0048856,GO:0048878,GO:0050687,GO:0050688,GO:0050730,GO:0050732,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051093,GO:0051098,GO:0051101,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051493,GO:0051641,GO:0051649,GO:0051960,GO:0051961,GO:0055088,GO:0055115,GO:0060173,GO:0060255,GO:0060271,GO:0060429,GO:0065007,GO:0065008,GO:0065009,GO:0070507,GO:0070925,GO:0071840,GO:0072001,GO:0072359,GO:0080090,GO:0080134,GO:0097014,GO:0097542,GO:0097546,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901620,GO:1901621,GO:1902531,GO:1902532,GO:1902679,GO:1902903,GO:1903506,GO:1903507,GO:1904892,GO:1904893,GO:1905515,GO:2000026,GO:2000112,GO:2000113,GO:2001141
Exons10
EggNOG free text desc.intraciliary transport
EggNOG OGsCOG5059@1,KOG0245@2759,KOG3809@1,KOG3809@2759
Ec32 ortholog descriptionKinesin motor domain
Ec32 orthologEc-20_003300.1
Cds size888
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10844.1232.1prot_Ecto-sp8_S_contig10844.1232.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10844 2..1493 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143176.5923712-CDS-Ecto-sp8_S_contig10844:1..8481681143176.5923712-CDS-Ecto-sp8_S_contig10844:1..848Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10844 2..848 -
1681143176.6027586-CDS-Ecto-sp8_S_contig10844:1452..14931681143176.6027586-CDS-Ecto-sp8_S_contig10844:1452..1493Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10844 1453..1493 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143176.6150823-UTR-Ecto-sp8_S_contig10844:1493..15501681143176.6150823-UTR-Ecto-sp8_S_contig10844:1493..1550Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10844 1494..1550 -
1681143176.6245775-UTR-Ecto-sp8_S_contig10844:2135..23091681143176.6245775-UTR-Ecto-sp8_S_contig10844:2135..2309Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10844 2136..2309 -
1681143176.633801-UTR-Ecto-sp8_S_contig10844:2818..30571681143176.633801-UTR-Ecto-sp8_S_contig10844:2818..3057Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10844 2819..3057 -
1681143176.6439238-UTR-Ecto-sp8_S_contig10844:3824..39721681143176.6439238-UTR-Ecto-sp8_S_contig10844:3824..3972Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10844 3825..3972 -
1681143176.6512284-UTR-Ecto-sp8_S_contig10844:4286..43641681143176.6512284-UTR-Ecto-sp8_S_contig10844:4286..4364Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10844 4287..4364 -
1681143176.6585605-UTR-Ecto-sp8_S_contig10844:4838..49041681143176.6585605-UTR-Ecto-sp8_S_contig10844:4838..4904Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10844 4839..4904 -
1681143176.6656501-UTR-Ecto-sp8_S_contig10844:5312..54311681143176.6656501-UTR-Ecto-sp8_S_contig10844:5312..5431Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10844 5313..5431 -
1681143176.672911-UTR-Ecto-sp8_S_contig10844:5971..61981681143176.672911-UTR-Ecto-sp8_S_contig10844:5971..6198Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10844 5972..6198 -
1681143176.6832502-UTR-Ecto-sp8_S_contig10844:6595..66911681143176.6832502-UTR-Ecto-sp8_S_contig10844:6595..6691Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10844 6596..6691 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10844.1232.1

>prot_Ecto-sp8_S_contig10844.1232.1 ID=prot_Ecto-sp8_S_contig10844.1232.1|Name=mRNA_Ecto-sp8_S_contig10844.1232.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=296bp
MGEAASRRQDTKNRAEARKSEGVRALALIRRQVVARGCQTRQQRGSGTVT
SVNGEAALDAAGQPIAAAIAAAEEVAAAGEAVAREAKEGEGRTRPANGAP
GRTAGRIGAEAEAAASMAATVANTLPARAADAEALCPAALVIARAVEAVL
CGTTASFAGTDGDSGGGESEGRGGLNSPETAAPPSATAELVTTIAAGEEK
REDVEMVADGGDGSQAERKQYRETLEGLAKALGTLRKALEAAAGHSKPSL
AISSASADEAAGVDRVSRTQGPSNDQAGGGSSGGDGRTVTEGGARA
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mRNA from alignment at Ecto-sp8_S_contig10844:2..6691-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10844.1232.1 ID=mRNA_Ecto-sp8_S_contig10844.1232.1|Name=mRNA_Ecto-sp8_S_contig10844.1232.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6690bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10844:2..6691- (Ectocarpus species8 EcLAC_412)
CTCACGGCCATGCTCGCCGCGCTGTCACCGGCTGCCTGCAACTTCGAGGA
AACCCTGAGCACTCTCAAGTACGCCAGCCGCGCCAAGAGCATCAAGGTAC
ATGCAGACCATAGAGGAAAGTACCCCCGCCGTTAGATTTGCAGGACCGCG
GTAAGCAAGTGCCGCCCTCGACCAATAGGAAACAAGCTCTCGTGGGCATA
TTTTGAGGGGCCTGCATATATGCTTCCCTGAATGCCATGCGTACGCATGT
GCGCTGAAGGTGAACGCTGTGAGAAACCTGGCATGCATTTTGGCGCGAGT
CAGTAGAAGAGTATCGAGAGGAAGGCGAGGAGGCGGTTCACACCGTGGCA
AAAGTTCGGTATGCCCCCACGTAGATCCATATTGCCTCTACCCTCTACTC
CGGCATGCCCTCACCAAGAAAGCGCTTCGAACGCAACAGTCTCTCCGAGC
AATCCTGCCCCTCACCCATTCCGCCGTAAAACGAAAACCAAAGGTGAACG
CCGTGAAGAACGAGGAAGCGTCGCAGGTCAGCCGCCTGGAGGAGGAAGTG
AGGGCTCTCAAGCAGAAACTGCTGGCTCACGAGCAGCAGACAGCCTCGAT
GTCTTCCCTGTCTTCCCCACCCCCATCCGCGCCGGCCGGCGGCAACGGCG
GCGATAGCAACGACACGAGCGCGGCAACGGCGGGGGAGGGAGTGGCAGAG
GGAAGCGGCGGAGGAGACAGGTTGGATTCTGGTCTAATGGGATCGCCTCC
ATTCATAGGTCATTAGGCTCGGTTAGGCGCGAGGGCAAGGGAATGCATTA
AGCTCGTGGTGGTGGGTCGGGTGCACCTCTTGATGGGTGTGATTTGACAC
AGGGGAGATGTCTGAAGAAAATGCCGTGCGAAAGGGCGGATGGAGACATG
CTTGTTCTAGAAATCCGGGTTGATCGCTGCAAAGGCTTAGAGCAGAGGGG
GAAGAATCAAGGGTCGGTGTTGTTGCGGCTTGAGGTGATGATGGAGTTTC
TAGCGGTTCCATTCTATGACACGTCGGGAATGGTATCCGGCGGTGAAGGG
TAAATAACATGTGAAATGCCGGCTTGCTAAACACGAGATCGCTGCGTCTA
CAACCAACTAGTGGATTGGACGTGGTGGTCGCTCTCGACGTTGATGCTCC
ATGAGCGCGTCTGAGCTACCCTCTGGCAAATCTGATAAAAGCACCAGGTC
TTTCAGTTGCAATCGCGCATACATATCATGCATGTCGATGTCGCTGCCTT
CCTGGGTCAGGTACAAGCAGCAAATTGCGGAGATGGAGGCGGCGATGAAG
AGCACCTGGGAGGAGAAGGCCAAACAGTCGGAGTCCAGTGAGCGGGAGCG
ACAGCGCCTGCAACAGCAGGCAATATGAAGTTCTTTGCAGTCCCTCTTTC
TCTTTCAACCGAATTTTTTGCCGAAAACATCCTTCGAAGATACGGCAAAA
AGTAGCTTGACTCAGGATTGGGCGAATGACGACACCCGCAGCTGGAAGCT
AACGTAAGCGAGCGCACCAGCCGCTCTGGTGTTCTGTTTTTCGGTTTACT
TCTGTTTTGTTCGTTTAGTGCTGACGTCTACTGCAGGGAAGGTTCTGCGA
AAGAAAGATATGTCTTTATTTTCGTACAGAAGGGCCCAACGAGAGACAGC
AACGCCTGCAGCTGGTAGAATCGTATCATTGATACGGAAAAATCTGTCTT
CTTTGCCTTTCACCCTCTCAAGAACGTTGATCGTTGGAAATATGATGTTC
CCCTATGTTCCCTCATCCTTTTCACCGAAAACATCAGCTTGACGAAGAGG
CGCGGCGCGAAGAAAGGGAGCGCAAGAAACGGTGGCGCTCTTTGGAAGAC
AAGGTGCTGACGCCGAAAAGAATACCACAGCAGCAGCCACAATAAGAAAA
CCTTCGTACTTTTGACGGCTGGACGAGTTGCCACTTCCTCTCCAGTCCGA
CGTGTATGCGATGGGGTCGGGGGATATAGTGTGCCAATCTACAAAACAAC
GGTGGGATGTTGCGCTTGTCGGAGGATGCGTCGAAGATAAACCTTCGATA
GCTGGTCATCAGCTATCTGCCTTGTCACCCCAGCTCATTTAGGCGGCAGC
GATGGCTCCGTGGTGGCGGTGGCGACCTCGTTGAGTAGCCTCTGCCCGTT
GATGACACGCTTTCGTTGACAACGCTGTTCGCTACCAGGAGTCACAAGTG
CTACAAAAAAAAACCTTTCATCTTTGTTTGCCTTGCCAGACGATCACCGT
GAGAGACTGTTAAGCAATGATTTCCTTGTTTTTTCTATTTGCTCATTTTG
AGATACATATTTTATCGCATGTGTCAGGGGGATCTCGAACTGTCGATCAG
GGAAGCCTCGGAGGTCGCGCTGCCCACGCTGCCTTCGAGAGACTGGCTGC
GGCAGGTGAGTGCTGGGTCCGTTGTTGTTCTTGCTATCGCTTTTGGTGTT
TTAATAGGGCGTAACACTGCTCCGATTCTACCCAACAGCTTTAGCATGCT
ATTTGGTTCGTTTCCTCGAAAACTTCAGTTGCTACCCCTGCCGCATGGGC
GACTTCGAGCCCAAGATTTCGACGTATGTTCTTTTCCTTCCCTGCAGCAT
GGACGCATGGCCCTACGCTTCCGATCCTGCACACCTGAGACTCCCAACAT
TTTTCTGTGTCACCTCGAAATACCTGCCCTGACGTAAGCTGTGTTTTGCG
CCTTCTCCTGTCCACCAAGGTGAGGGCTTTGGTGGCCGCGGAGAACCGCG
CCCGTGAAGAGGCCACCGTGTGCGCGGTCTACAGAGAAGCTCTCGCGCTG
GAGATTGACGGAGTGTTCTCCGGAGATCGTTCCTTGTCAGGGTCTTCGTT
TTTCTCGGGGCTGTACGGTGAGTTGGCTCCCGTCAATGTTTCGGAGAATA
CCCTCTCTTAGCTAGCCCCTTCCCGGTGTTCTTGAGTTCGTCCCGAGCTT
GTTTAATCCACTTCCCGACAAAAAGTAAAAATATTCCATGCAGTCGCGAC
TTGCGGAGTTAGATGGCGGACGTTCTCATACTCCTGTGCAGCAAGTTTCA
AGTACCAAGAGTGCAACCACACCGTACCCATCTGAATTTTTCACGTGCAG
TGACCTGCGGACGTGTCCATAGAGAACACGTATCCTAGCGCACAGCTGGG
ATTGGGGGTGGGAGAAAGGGGAGCTCATCGATTTGAGGCCGATAGGTTGA
CCAAAGACTGATGAACAAGGAGGGACAGCCGTTCCAGGTTTTTGCGTCAT
CGGATACTTTCTCTGTCTCCGGCGTGTTAGTCGACATTCGCTTGCTGACG
GCTTCGGGGTCCTTGCTGAGCCCCACCAGCCTATATCTTGGCGAGGTATG
CTTCCATGAGACACCTGTGCCGTCCCTTTTCGGTAAGGGCTATTCCTTCG
GACTGCCTTGGTTTATCTTTCACCACGAGAGCATTTTCCTCAGGACATGG
TCCTGGTGTATGCACTTGATTCATCTCGCGCAAGGAGGGATTTGGCGAGA
GGATGCGTTCCTTCTCGTCCCTCGGACCCACACAACTGACAGTGCTGCCT
GTTTTGTCTCCAACCAACCCTTACTGGCTTCAACTCTCCTAAACAAAACA
GTCGTGCGGTTGGTGTGTTCTCTTTCACATCCAGGCGGCGACCCCGATGA
CGACCGCGCGTCGGTGGCATCGACAGCCTGCACCGCCGTCTCGGATCGCG
AGGGCGTCCACACCACCGGCGCCGCTGCCGCGGCCGGAGACGACGAGGGC
ATTCAACAAAACCAATCTCGAGGTGCACCACCTGGAGATGGTAGTGGTGG
TGGAGGTAGTCTTCCGAGACAAGCGGTCAAAGCTGCATCAAACTACGACC
CCGCCCTGTTGCGTCAGCTACAGGTGCGCCATTAGTCGAAACAAGACGCT
TTCGCGCCCCCCTTCCCCCCAATCCCACCTCTCGGTGGCGAGAGAAAATC
ACTTCGATGTGCCCTGGCGTACTCAGGTCCTGTTCCTATACTCGGACCTA
AGCGCTCTGAGCGTAGGCAGTCACCTTGCGTTATCGACATGAGCCGAGTC
CCTCAGGTGTACGTTAAAGCGGTGTGGCAGTGTTGGCAAGAGCCTCTAGC
GACTTTTCCAGAAACCATCCTCCCATGGCTACAGCGCAATGCCAGCGAGG
GAACATTCTGCCTCATCCAGTACCCTGACCTTCCTTTATTGTATCCATTA
TCCCCTTGGTCCTCGCCTCGCCCTCCTACGGAAGTCATCATCACATGAAA
CGAAAAACGTCTTGAGTGAAAGTCTACTCCTCTACCTTGAAAGATGCCGT
TCGTTGTTGATACTCTGCACACAGAGTACCTGCCTTGCTCGCCTACGTTA
ACGCCTTTCTTTGGGTGTCTCAAAACACCCAGGCGCGACTCACGAGCCTC
AGAGACGCGCGAGAGAGGCTCCACGGTCCGCTCGCGAGAGCTGTCGAAGA
GAGTTCTAAGAAGCTTTTGGAAAGTGTGGAGTCGTTCTCGGCGAAGTTTG
CGGCCTCTCCGCACGAGCACATCGGCGGCGGCGTGCAACGGCTAGGAGGT
GCAGAGGTGCGTGGCAAATCAAGCAAAGAACCAGCGGGGTAGAATTTGTA
GCGGTGGTTTTCGGGCTAGGTTTACAAACCGTGAACGACTTTTTGTGGAT
CCTTTATATATCTTCTTTGTTCTGTTTGGGGATGGTTAAACCAACATTAA
ACAGGAAATACCGTATCTTTCTGGAAGTATCCTCGTTCGTAATACGATAT
GCTTGAACAACGTGCGAAGTGGTTTTGCCGATAGTTCCGTCGCTCTTGTG
ATCCCCTCCGCACGAGAGCATGGCGTGACTCAAGGGCGGGGGCGAAAACC
AGCGCGGAGAGACAACAACACCACGTGTAGTAGTAAACGGCGTGTTGGAC
GTTAGCAGGGGATGTTGGAATTTGTCCCAACTTGTGAGCGTTTACTTTCC
ACGCGTGCGCGCTTTCTCTACGTTGTTGGCCTTCCATCCAAAGGGAGACA
ATCTACCACACGCAGCCACGCTTTTTTTTTGTCCAAGGCCGCGCATGGAG
TAGCGGCTGCGGCAAAGGTGTTACTGTCCAAGTTAGGCGCTAACCTGTTG
CCTTCATCATCCGTGATGACGATCGACCTCGTGACGTGCAGAGCAAAAGG
GACAAAGGTGCGACATCAGCGACAGCAGGAGCAGGAGGAAGAGGAGAGAT
GGGGGAGGCTGCATCCCGAAGGCAAGACACCAAGAACCGGTGACATCGAA
GCTGGAATGTCCCCGCATGTTCTGTCACTCGGCGGGCGGAAGCAACTGCT
GCCGGACAAGAGATGATGCGGAACGAGAACACGACGCCGACAATGTTTGA
GCCATTCTGAGGCAAAACGCCTCCCCAACATACTTTCGAAACGAACTCCT
TCACCCCGCCTACCGTTTATAGTAGCAACACCGCGCACCAACCGATGGAC
GATTTGGAACCCTCTCTCGTTCTTCCGCTTGTTCTTAGCCTCTTGTGCGT
CGACAACAATGGTGGCACAACGCGCTTTTGTTTCCAGCCCACGCGCCTCC
CACGACCTCTCACATCGCCTGGACCCTGCAAGTACCATGTGTTAAGATGG
TCGACCGTGAGCGTTGCGTTCCGGCGACAAAGAAAAAAACGCCCCCATAC
TACACAGGTGGTATCCATAGAACTGCGCCACCACATCGTCCGTACAGGAC
CTCTTTGTACCGTATCACATTCAATGTAGATTCCGGGGAAACGAACGGAA
CGCCGGTGAATATGCGCCTTCATGCTGTTGTCCCTCCAGCGGGTATCGTC
CTCACAACGTGACAATATTGACATGATCCACTCGATACATCAGGGCGGAG
GCCAGGAAGAGCGAGGGAGTCCGCGCGCTGGCCTTGATTCGTCGGCAGGT
CGTCGCCCGTGGCTGCCAGACTCGGCAGCAACGGGGCTCTGGTACTGTGA
CCAGCGTCAACGGCGAAGCGGCGCTAGACGCTGCCGGGCAACCAATAGCC
GCAGCCATCGCAGCAGCAGAAGAAGTAGCAGCAGCGGGAGAAGCGGTAGC
AAGAGAGGCCAAAGAAGGGGAAGGGAGAACGAGGCCGGCTAATGGAGCAC
CAGGAAGAACCGCAGGACGAATAGGAGCTGAGGCAGAAGCAGCAGCGTCG
ATGGCTGCGACAGTCGCGAACACTCTACCCGCAAGAGCCGCAGACGCGGA
GGCGCTCTGCCCCGCCGCTTTAGTCATCGCGAGAGCGGTGGAGGCCGTAC
TGTGCGGTACCACCGCAAGTTTCGCGGGCACCGACGGTGACAGCGGCGGT
GGCGAAAGCGAAGGGCGAGGCGGACTCAACAGTCCAGAAACAGCAGCACC
ACCATCAGCAACGGCGGAACTAGTGACGACAATTGCTGCCGGTGAAGAGA
AACGCGAAGACGTTGAGATGGTCGCCGATGGGGGAGACGGGAGTCAGGCG
GAGCGAAAGCAGTATCGCGAAACTCTGGAGGGGCTGGCCAAAGCTCTTGG
AACCCTCCGGAAGGCGCTCGAAGCTGCAGCGGGGCATTCCAAGCCCTCCC
TTGCAATCTCCTCCGCGTCAGCAGATGAGGCTGCCGGGGTCGACAGAGTT
TCCAGGACGCAGGGGCCTTCCAATGATCAAGCTGGCGGCGGCAGTAGCGG
TGGTGATGGACGCACCGTCACGGAAGGAGGGGCAAGGGCA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10844:2..6691-

>mRNA_Ecto-sp8_S_contig10844.1232.1 ID=mRNA_Ecto-sp8_S_contig10844.1232.1|Name=mRNA_Ecto-sp8_S_contig10844.1232.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=888bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10844:2..6691- (Ectocarpus species8 EcLAC_412)
ATGGGGGAGGCTGCATCCCGAAGGCAAGACACCAAGAACCGGGCGGAGGC
CAGGAAGAGCGAGGGAGTCCGCGCGCTGGCCTTGATTCGTCGGCAGGTCG
TCGCCCGTGGCTGCCAGACTCGGCAGCAACGGGGCTCTGGTACTGTGACC
AGCGTCAACGGCGAAGCGGCGCTAGACGCTGCCGGGCAACCAATAGCCGC
AGCCATCGCAGCAGCAGAAGAAGTAGCAGCAGCGGGAGAAGCGGTAGCAA
GAGAGGCCAAAGAAGGGGAAGGGAGAACGAGGCCGGCTAATGGAGCACCA
GGAAGAACCGCAGGACGAATAGGAGCTGAGGCAGAAGCAGCAGCGTCGAT
GGCTGCGACAGTCGCGAACACTCTACCCGCAAGAGCCGCAGACGCGGAGG
CGCTCTGCCCCGCCGCTTTAGTCATCGCGAGAGCGGTGGAGGCCGTACTG
TGCGGTACCACCGCAAGTTTCGCGGGCACCGACGGTGACAGCGGCGGTGG
CGAAAGCGAAGGGCGAGGCGGACTCAACAGTCCAGAAACAGCAGCACCAC
CATCAGCAACGGCGGAACTAGTGACGACAATTGCTGCCGGTGAAGAGAAA
CGCGAAGACGTTGAGATGGTCGCCGATGGGGGAGACGGGAGTCAGGCGGA
GCGAAAGCAGTATCGCGAAACTCTGGAGGGGCTGGCCAAAGCTCTTGGAA
CCCTCCGGAAGGCGCTCGAAGCTGCAGCGGGGCATTCCAAGCCCTCCCTT
GCAATCTCCTCCGCGTCAGCAGATGAGGCTGCCGGGGTCGACAGAGTTTC
CAGGACGCAGGGGCCTTCCAATGATCAAGCTGGCGGCGGCAGTAGCGGTG
GTGATGGACGCACCGTCACGGAAGGAGGGGCAAGGGCA
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